Cp4.1LG01g10650 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG01g10650
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Plant protein 1589 of unknown function
Location	Cp4.1LG01: 6578686 .. 6579939 (+)
RNA-Seq Expression	Cp4.1LG01g10650
Synteny	Cp4.1LG01g10650

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGGTTGGTGAGTTGGCCGTGGGGTTGTGATTTTGTCTGATCTGGAGGTGGGGGCCCACAGATCACGTGGTAAGGAGGCTCAAAACGAGACAAATGATTGGTCATTCAGGAATCCCATCTGCACCAATTATCACCGATTGCCCACGTGGTACGCTGCTACTGGTTGACCCCACCAGTCAATTTCCTATAAGCACAACGCTTTCACCTCTCCATTGCTGCCAGTCGGTGTAGCGTTATCAAATCCCTTTTCACTAAATGAATCTATATATATATTTGAGCGCAGATGGGCGTAATGCATATAAATTCAGATTTCATGGCTGATTCTTCTGCTGCTTACATTCATATGGTAACCATTCATTTCCTTTCATGTTCTTTATTATTAACGTGTATCAACGTTATTTCCGTTCGCTTTTAGGTGCAACACCTGATCGAGAACTGCTTGATCGTCCATATGAATAAAGAGGAGTGCATAGAAGCTCTCTCCAAATACGCTAATATCACCCCGATAATCACTGAAACTGGTTCGTTCCCATTTTTCCTTCTTTTCTTCCCACCCGTCATCACTACTTCAACATAGCTAACAATTTGTGCATTGTTCGGTATAATTCAGAGCAATTATAAATGTAATTCGAATCTGCATCAAAGGGTTATTAGATGACATACTGATTTTAAAAATCTACGATCTATTAGATAATTTATTATTTCTTTGTAACAGTGTGGAAGGAACTAGAGAAAGAAAACAGAGAGTTCTTTGAAGCTTATTTAGAATCTCGTAGCAGAAATGATAGAATACTGGCTGAAGAAGAGACAAGACAGTTGATCCAACGGATGATGTCTAAACATACTAACGATTAGGTGTTGACTAGGCGATGACCAGGTGATGACTAGGTGACCGATCCATACACATGCATGCATCAATTACTTATATATNTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTCTCATTTCTATACACATGTTTAAAATGGAATATATGTACAAATATTAGCCTAAAATAATTTACCATTTTTTTGAGTATTATAATAATACATATGCCTTACGTTCAACATTTGACACGTAATTCATCGGTATCATAGTCTTCACATCATTCGTAAATTTTTCTTTTATGTCAAACAGTGAATGAAATTTTTTTCGACGAATTATATTGACTTCACTATATAATATCCAAAGGGTAGTTTGGTAATTTGCTCGTGTTCGGTATTGCCACATGGTAAGGGATGATTAGATTCA

mRNA sequence

ATGGTGATGGGCGTAATGCATATAAATTCAGATTTCATGGCTGATTCTTCTGCTGCTTACATTCATATGGTGCAACACCTGATCGAGAACTGCTTGATCGTCCATATGAATAAAGAGGAGTGCATAGAAGCTCTCTCCAAATACGCTAATATCACCCCGATAATCACTGAAACTGTGTGGAAGGAACTAGAGAAAGAAAACAGAGAGTTCTTTGAAGCTTATTTAGAATCTCGTAGCAGAAATGATAGAATACTGGCTGAAGAAGAGACAAGACAGTTGATCCAACGGATGATGTCTAAACATACTAACGATTAGGTGTTGACTAGGCGATGACCAGGTGATGACTAGGTGACCGATCCATACACATGCATGCATCAATTACTTATATATNTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTCTCATTTCTATACACATGTTTAAAATGGAATATATGTACAAATATTAGCCTAAAATAATTTACCATTTTTTTGAGTATTATAATAATACATATGCCTTACGTTCAACATTTGACACGTAATTCATCGGTATCATAGTCTTCACATCATTCGTAAATTTTTCTTTTATGTCAAACAGTGAATGAAATTTTTTTCGACGAATTATATTGACTTCACTATATAATATCCAAAGGGTAGTTTGGTAATTTGCTCGTGTTCGGTATTGCCACATGGTAAGGGATGATTAGATTCA

Coding sequence (CDS)

ATGGTGATGGGCGTAATGCATATAAATTCAGATTTCATGGCTGATTCTTCTGCTGCTTACATTCATATGGTGCAACACCTGATCGAGAACTGCTTGATCGTCCATATGAATAAAGAGGAGTGCATAGAAGCTCTCTCCAAATACGCTAATATCACCCCGATAATCACTGAAACTGTGTGGAAGGAACTAGAGAAAGAAAACAGAGAGTTCTTTGAAGCTTATTTAGAATCTCGTAGCAGAAATGATAGAATACTGGCTGAAGAAGAGACAAGACAGTTGATCCAACGGATGATGTCTAAACATACTAACGATTAG

Protein sequence

MVMGVMHINSDFMADSSAAYIHMVQHLIENCLIVHMNKEECIEALSKYANITPIITETVWKELEKENREFFEAYLESRSRNDRILAEEETRQLIQRMMSKHTND

Homology

[Close]

BLAST of Cp4.1LG01g10650 vs. NCBI nr
Match: XP_023551038.1 (uncharacterized protein LOC111808986 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 200 bits (508), Expect = 1.81e-64
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0


Query: 3   MGVMHINSDFMADSSAAYIHMVQHLIENCLIVHMNKEECIEALSKYANITPIITETVWKE 62
           MGVMHINSDFMADSSAAYIHMVQHLIENCLIVHMNKEECIEALSKYANITPIITETVWKE
Sbjct: 1   MGVMHINSDFMADSSAAYIHMVQHLIENCLIVHMNKEECIEALSKYANITPIITETVWKE 60

Query: 63  LEKENREFFEAYLESRSRNDRILAEEETRQLIQRMMSKHTND 104
           LEKENREFFEAYLESRSRNDRILAEEETRQLIQRMMSKHTND
Sbjct: 61  LEKENREFFEAYLESRSRNDRILAEEETRQLIQRMMSKHTND 102

[Close]

BLAST of Cp4.1LG01g10650 vs. NCBI nr
Match: XP_022957149.1 (uncharacterized protein LOC111458619 [Cucurbita moschata])

HSP 1 Score: 192 bits (488), Expect = 2.03e-61
Identity = 98/102 (96.08%), Postives = 101/102 (99.02%), Query Frame = 0


Query: 3   MGVMHINSDFMADSSAAYIHMVQHLIENCLIVHMNKEECIEALSKYANITPIITETVWKE 62
           MGV+HINSDFMADSSAAYIHMVQ+LIENCLI HMNKEECIEALSKYANITPIITETVWKE
Sbjct: 1   MGVVHINSDFMADSSAAYIHMVQYLIENCLIFHMNKEECIEALSKYANITPIITETVWKE 60

Query: 63  LEKENREFFEAYLESRSRNDRILAEEETRQLIQRMMSKHTND 104
           LEKENREFFEAYLESRSRNDRILAEEETRQLIQRMMSKHT+D
Sbjct: 61  LEKENREFFEAYLESRSRNDRILAEEETRQLIQRMMSKHTDD 102

[Close]

BLAST of Cp4.1LG01g10650 vs. NCBI nr
Match: XP_022976489.1 (uncharacterized protein LOC111476870 [Cucurbita maxima])

HSP 1 Score: 185 bits (469), Expect = 1.61e-58
Identity = 94/102 (92.16%), Postives = 100/102 (98.04%), Query Frame = 0


Query: 3   MGVMHINSDFMADSSAAYIHMVQHLIENCLIVHMNKEECIEALSKYANITPIITETVWKE 62
           MGV+HINSDFMADSSAAYIHMVQ+LIENCLI HMNK+ECIEALSKYANI PIITETVWKE
Sbjct: 1   MGVVHINSDFMADSSAAYIHMVQYLIENCLIFHMNKKECIEALSKYANIIPIITETVWKE 60

Query: 63  LEKENREFFEAYLESRSRNDRILAEEETRQLIQRMMSKHTND 104
           LEKENREFFEAYLESRSRNDRILAE+ETRQLIQRMMSKHT++
Sbjct: 61  LEKENREFFEAYLESRSRNDRILAEKETRQLIQRMMSKHTDN 102

[Close]

BLAST of Cp4.1LG01g10650 vs. NCBI nr
Match: XP_038893010.1 (uncharacterized protein LOC120081903 [Benincasa hispida])

HSP 1 Score: 160 bits (405), Expect = 6.82e-49
Identity = 81/92 (88.04%), Postives = 86/92 (93.48%), Query Frame = 0


Query: 13  MADSSAAYIHMVQHLIENCLIVHMNKEECIEALSKYANITPIITETVWKELEKENREFFE 72
           MADSSAAYIHMVQHLI+ CLI HMNKEECIEALSK+ANI+PIIT TVWKELEKENREFFE
Sbjct: 1   MADSSAAYIHMVQHLIDKCLIFHMNKEECIEALSKHANISPIITSTVWKELEKENREFFE 60

Query: 73  AYLESRSRNDRILAEEETRQLIQRMMSKHTND 104
           AY ES  RNDRILAEEETRQLIQRMMSKH++D
Sbjct: 61  AYSESMGRNDRILAEEETRQLIQRMMSKHSDD 92

[Close]

BLAST of Cp4.1LG01g10650 vs. NCBI nr
Match: XP_004147706.1 (uncharacterized protein LOC101203417 [Cucumis sativus] >KGN50512.1 hypothetical protein Csa_000273 [Cucumis sativus])

HSP 1 Score: 158 bits (399), Expect = 5.61e-48
Identity = 79/92 (85.87%), Postives = 86/92 (93.48%), Query Frame = 0


Query: 13  MADSSAAYIHMVQHLIENCLIVHMNKEECIEALSKYANITPIITETVWKELEKENREFFE 72
           MADSSAAYIHMVQHLIE CLI HMNK+ECIEALSK+ANI+PIIT TVWKELEKENREFFE
Sbjct: 1   MADSSAAYIHMVQHLIEKCLIFHMNKDECIEALSKHANISPIITSTVWKELEKENREFFE 60

Query: 73  AYLESRSRNDRILAEEETRQLIQRMMSKHTND 104
           AY E + RNDRILAEEETR+LIQRMMSKH++D
Sbjct: 61  AYSECKGRNDRILAEEETRKLIQRMMSKHSDD 92

[Close]

BLAST of Cp4.1LG01g10650 vs. ExPASy TrEMBL
Match: A0A6J1H147 (uncharacterized protein LOC111458619 OS=Cucurbita moschata OX=3662 GN=LOC111458619 PE=4 SV=1)

HSP 1 Score: 192 bits (488), Expect = 9.85e-62
Identity = 98/102 (96.08%), Postives = 101/102 (99.02%), Query Frame = 0


Query: 3   MGVMHINSDFMADSSAAYIHMVQHLIENCLIVHMNKEECIEALSKYANITPIITETVWKE 62
           MGV+HINSDFMADSSAAYIHMVQ+LIENCLI HMNKEECIEALSKYANITPIITETVWKE
Sbjct: 1   MGVVHINSDFMADSSAAYIHMVQYLIENCLIFHMNKEECIEALSKYANITPIITETVWKE 60

Query: 63  LEKENREFFEAYLESRSRNDRILAEEETRQLIQRMMSKHTND 104
           LEKENREFFEAYLESRSRNDRILAEEETRQLIQRMMSKHT+D
Sbjct: 61  LEKENREFFEAYLESRSRNDRILAEEETRQLIQRMMSKHTDD 102

[Close]

BLAST of Cp4.1LG01g10650 vs. ExPASy TrEMBL
Match: A0A6J1INM0 (uncharacterized protein LOC111476870 OS=Cucurbita maxima OX=3661 GN=LOC111476870 PE=4 SV=1)

HSP 1 Score: 185 bits (469), Expect = 7.79e-59
Identity = 94/102 (92.16%), Postives = 100/102 (98.04%), Query Frame = 0


Query: 3   MGVMHINSDFMADSSAAYIHMVQHLIENCLIVHMNKEECIEALSKYANITPIITETVWKE 62
           MGV+HINSDFMADSSAAYIHMVQ+LIENCLI HMNK+ECIEALSKYANI PIITETVWKE
Sbjct: 1   MGVVHINSDFMADSSAAYIHMVQYLIENCLIFHMNKKECIEALSKYANIIPIITETVWKE 60

Query: 63  LEKENREFFEAYLESRSRNDRILAEEETRQLIQRMMSKHTND 104
           LEKENREFFEAYLESRSRNDRILAE+ETRQLIQRMMSKHT++
Sbjct: 61  LEKENREFFEAYLESRSRNDRILAEKETRQLIQRMMSKHTDN 102

[Close]

BLAST of Cp4.1LG01g10650 vs. ExPASy TrEMBL
Match: A0A0A0KQ71 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G179770 PE=4 SV=1)

HSP 1 Score: 158 bits (399), Expect = 2.72e-48
Identity = 79/92 (85.87%), Postives = 86/92 (93.48%), Query Frame = 0


Query: 13  MADSSAAYIHMVQHLIENCLIVHMNKEECIEALSKYANITPIITETVWKELEKENREFFE 72
           MADSSAAYIHMVQHLIE CLI HMNK+ECIEALSK+ANI+PIIT TVWKELEKENREFFE
Sbjct: 1   MADSSAAYIHMVQHLIEKCLIFHMNKDECIEALSKHANISPIITSTVWKELEKENREFFE 60

Query: 73  AYLESRSRNDRILAEEETRQLIQRMMSKHTND 104
           AY E + RNDRILAEEETR+LIQRMMSKH++D
Sbjct: 61  AYSECKGRNDRILAEEETRKLIQRMMSKHSDD 92

[Close]

BLAST of Cp4.1LG01g10650 vs. ExPASy TrEMBL
Match: A0A6J1CBZ2 (uncharacterized protein LOC111010170 OS=Momordica charantia OX=3673 GN=LOC111010170 PE=4 SV=1)

HSP 1 Score: 155 bits (391), Expect = 4.51e-47
Identity = 77/92 (83.70%), Postives = 87/92 (94.57%), Query Frame = 0


Query: 13  MADSSAAYIHMVQHLIENCLIVHMNKEECIEALSKYANITPIITETVWKELEKENREFFE 72
           MADSSAAYIHMVQHLIE CLI HMNK+EC+EALSK+ANI+PIIT TVWKELEKENREFFE
Sbjct: 1   MADSSAAYIHMVQHLIEKCLIFHMNKDECMEALSKHANISPIITSTVWKELEKENREFFE 60

Query: 73  AYLESRSRNDRILAEEETRQLIQRMMSKHTND 104
           AY ESR++NDRILAEEETRQLI+RM+SK ++D
Sbjct: 61  AYXESRNKNDRILAEEETRQLIERMISKDSDD 92

[Close]

BLAST of Cp4.1LG01g10650 vs. ExPASy TrEMBL
Match: A0A5A7V1X1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold321G00180 PE=4 SV=1)

HSP 1 Score: 151 bits (382), Expect = 1.09e-45
Identity = 77/93 (82.80%), Postives = 86/93 (92.47%), Query Frame = 0


Query: 13  MADSSAAYIHMVQHLIENCLIVHMNKEECIEALSKYANITPIITETVWKELEKENREFFE 72
           MADSSAAYIHMVQHLIE CLI HMNK+ECIEALSK+ANI+P+IT TVWKELEKENREFFE
Sbjct: 1   MADSSAAYIHMVQHLIEKCLIFHMNKDECIEALSKHANISPVITSTVWKELEKENREFFE 60

Query: 73  AYLESRSRNDRILAEEETRQLIQRMM-SKHTND 104
           AY E + RNDRILAEEETR+LIQRMM SKH+++
Sbjct: 61  AYSECKGRNDRILAEEETRKLIQRMMMSKHSDE 93

[Close]

BLAST of Cp4.1LG01g10650 vs. TAIR 10
Match: AT3G55240.1 (Plant protein 1589 of unknown function )

HSP 1 Score: 123.2 bits (308), Expect = 1.2e-28
Identity = 61/93 (65.59%), Postives = 81/93 (87.10%), Query Frame = 0


Query: 13  MAD-SSAAYIHMVQHLIENCLIVHMNKEECIEALSKYANITPIITETVWKELEKENREFF 72
           MAD SSA+YIHMVQH+IE CLI HM+KEEC+EALSK+ANITP+IT TVWKELEKEN+EFF
Sbjct: 1   MADSSSASYIHMVQHMIEKCLIFHMSKEECVEALSKHANITPVITSTVWKELEKENKEFF 60

Query: 73  EAYLESRSRNDRILAEEETRQLIQRMMSKHTND 105
           +AY E +S+ ++ ++EEET Q+IQ+++S  + +
Sbjct: 61  KAYEERQSKQEQ-MSEEETNQMIQKIISDSSKE 92

[Close]

BLAST of Cp4.1LG01g10650 vs. TAIR 10
Match: AT3G28990.1 (Plant protein 1589 of unknown function )

HSP 1 Score: 100.9 bits (250), Expect = 6.3e-22
Identity = 51/84 (60.71%), Postives = 64/84 (76.19%), Query Frame = 0


Query: 16  SSAAYIHMVQHLIENCLIVHMNKEECIEALSKYANITPIITETVWKELEKENREFFEAYL 75
           S A YIH+VQH+IE CL  +M+KEEC+EALS+ ANI PIIT TVWKEL KEN++FFE Y 
Sbjct: 5   SPAVYIHLVQHMIETCLTFNMSKEECMEALSENANINPIITSTVWKELVKENKDFFETY- 64

Query: 76  ESRSRNDRILAEEETRQLIQRMMS 100
           E +      ++EEET QLIQ ++S
Sbjct: 65  EQKLMKKESMSEEETNQLIQNIIS 87

[Close]

BLAST of Cp4.1LG01g10650 vs. TAIR 10
Match: AT5G02580.1 (Plant protein 1589 of unknown function )

HSP 1 Score: 98.2 bits (243), Expect = 4.1e-21
Identity = 49/87 (56.32%), Postives = 65/87 (74.71%), Query Frame = 0


Query: 16  SSAAYIHMVQHLIENCLIVHMNKEECIEALSKYANITPIITETVWKELEKENREFFEAYL 75
           S A+YIH+V HLIE C++ +M KEEC++AL K+ANI PIIT TVWKEL KEN+EFFEAY 
Sbjct: 7   SQASYIHLVHHLIEECIVFNMGKEECMDALFKHANIKPIITSTVWKELAKENKEFFEAY- 66

Query: 76  ESRSRNDRILAEEETRQLIQRMMSKHT 103
               R + I  E+ET + I+ ++S+ T
Sbjct: 67  --ERRREEIPTEKETARRIRDLLSRTT 90

[Close]

BLAST of Cp4.1LG01g10650 vs. TAIR 10
Match: AT1G10657.2 (Plant protein 1589 of unknown function )

HSP 1 Score: 73.6 bits (179), Expect = 1.1e-13
Identity = 28/56 (50.00%), Postives = 46/56 (82.14%), Query Frame = 0


Query: 19 AYIHMVQHLIENCLIVHMNKEECIEALSKYANITPIITETVWKELEKENREFFEAY 75
          +YI MVQH+IE C+++ M ++EC++AL  +A+I P++T TVW+ L++EN++FFE Y
Sbjct: 22 SYIRMVQHMIERCILLRMTRDECVKALDHHASILPLVTLTVWRGLQRENKDFFETY 77

[Close]

BLAST of Cp4.1LG01g10650 vs. TAIR 10
Match: AT1G10657.3 (Plant protein 1589 of unknown function )

HSP 1 Score: 73.6 bits (179), Expect = 1.1e-13
Identity = 28/56 (50.00%), Postives = 46/56 (82.14%), Query Frame = 0


Query: 19 AYIHMVQHLIENCLIVHMNKEECIEALSKYANITPIITETVWKELEKENREFFEAY 75
          +YI MVQH+IE C+++ M ++EC++AL  +A+I P++T TVW+ L++EN++FFE Y
Sbjct: 22 SYIRMVQHMIERCILLRMTRDECVKALDHHASILPLVTLTVWRGLQRENKDFFETY 77

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g10650 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG01g10650 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023551038.1	1.81e-64	100.00	uncharacterized protein LOC111808986 [Cucurbita pepo subsp. pepo]	[more]
XP_022957149.1	2.03e-61	96.08	uncharacterized protein LOC111458619 [Cucurbita moschata]	[more]
XP_022976489.1	1.61e-58	92.16	uncharacterized protein LOC111476870 [Cucurbita maxima]	[more]
XP_038893010.1	6.82e-49	88.04	uncharacterized protein LOC120081903 [Benincasa hispida]	[more]
XP_004147706.1	5.61e-48	85.87	uncharacterized protein LOC101203417 [Cucumis sativus] >KGN50512.1 hypothetical ...	[more]

BLAST of Cp4.1LG01g10650 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H147	9.85e-62	96.08	uncharacterized protein LOC111458619 OS=Cucurbita moschata OX=3662 GN=LOC1114586...	[more]
A0A6J1INM0	7.79e-59	92.16	uncharacterized protein LOC111476870 OS=Cucurbita maxima OX=3661 GN=LOC111476870...	[more]
A0A0A0KQ71	2.72e-48	85.87	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G179770 PE=4 SV=1	[more]
A0A6J1CBZ2	4.51e-47	83.70	uncharacterized protein LOC111010170 OS=Momordica charantia OX=3673 GN=LOC111010...	[more]
A0A5A7V1X1	1.09e-45	82.80	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of Cp4.1LG01g10650 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G55240.1	1.2e-28	65.59	Plant protein 1589 of unknown function	[more]
AT3G28990.1	6.3e-22	60.71	Plant protein 1589 of unknown function	[more]
AT5G02580.1	4.1e-21	56.32	Plant protein 1589 of unknown function	[more]
AT1G10657.2	1.1e-13	50.00	Plant protein 1589 of unknown function	[more]
AT1G10657.3	1.1e-13	50.00	Plant protein 1589 of unknown function	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006476	Conserved hypothetical protein CHP01589, plant	TIGRFAM	TIGR01589	TIGR01589	coord: 21..74 e-value: 8.2E-23 score: 78.2
IPR006476	Conserved hypothetical protein CHP01589, plant	PFAM	PF09713	A_thal_3526	coord: 24..74 e-value: 2.4E-24 score: 85.4
IPR006476	Conserved hypothetical protein CHP01589, plant	PANTHER	PTHR31871	OS02G0137100 PROTEIN	coord: 13..100
None	No IPR available	PANTHER	PTHR31871:SF18	ANGIOTENSIN-CONVERTING ENZYME 2-RELATED	coord: 13..100

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g10650.1	Cp4.1LG01g10650.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032502	developmental process