Cp4.1LG01g10470 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG01g10470
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionRho-associated protein kinase 1
LocationCp4.1LG01: 6669480 .. 6671261 (+)
RNA-Seq ExpressionCp4.1LG01g10470
SyntenyCp4.1LG01g10470
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATCGTTTGCCACTTGCAATGGGAAAAAAGAAATTAGCTCTTCCATCAACAAATGACAGCGAAGTAGTCCCCAATGTTCCAAGGAAGCAAATAGATGATAGTGAAAGGTCCAGCACCAGTCCTAAACTTAGAAGGACCCGGTCATTATCTTCCGCTGCATTCAAATAAACTTCTATGATTCGTCAGGAAATGCCAAATGATTACCATAGCTCGGGACCTGTTAGGCCATGCTCCAGAACTTGCTATGATTCGTCAGGAAATTCTTCCACTAGCTCCAGTACTGTTTCAAATGGAGTCTTAGCCCGCTACATTGATGGTGAACAACATCGGGAAATAAATGGATCCATGAATAAGTATTCTCAGAGAAGTAACGGGTGGCGGCCTCCTCGAGCACAGTGTCTGCCACCTTCTTCAACAACAGCTACAGATAAACCCAGATTCTATTCATCAAGAGAAGCTAAATGTTCTTTTCCTCGTTTCTTGTCTGAAGAAGTGGGAGAATATGGATTTGGGAATGACTCACCTCGAAGTATTGCAAAGACCGTTGTTAACAGACTCTCACAACATCATGCTGTGCCTAAAGCGACCTCTAAAGAGCTTGGTGAAAATATACCCATCAAAGTTACAGACAATGGGAGTGAGAGTGGTGATATAACCATCAAGTTGGATAGTGAAATGTCAACTCGTGTTTACCATCTTCAAAATCAAGGTCTGGTATTGCTAAATGTCAACTCAATTTTGTTCCAACTTACTTGAGTTCATCAAAGAGAAAGTTGGTCGGTTTCATCCAACCGAGCATAGAATAGAGCATATCAAGAATTGTTTGGATGGACAATTTTTTCTTGAATCTGAAACGAAAATTCGGGGCTTCAAGCATAGGATTGAGAGCTTGACAAAGAGTTTACAGAAACTATCTATATTGTTGCAAGCGAAGTCTGATCCCAGTTCACTGAGTTTTGGTGTAAACAATGCACTACAACTCAATAGTCAATATCCAGAGGTGAATAATTTCTCATTATCCCTGGAAATGGGACATTATTCTGAACATTATTCTGAACATTATTCTGACATTACAAATCATAGAGTTGATTTTGTTTACTATGCTGGGACATTTAACAGTTTTGGATGGTTTAAGATCTGAGCTAGAAGCAGAAACTTTATTTTCAAGACTATTGAGAGAGAAACTATACTCTAAGGAGCTGGAAGTGGAGCAGTTGCAAGCTGAACTGGTGACAGCAGTAAGAGGGCCTTTCCTGCTAAAATGTGAAATCCAGAATGCGATGGCCTTTCCTGCCTGGTGATAGCCTTTCCTGCCTTACTCATACGATGAAAGATCTCGAACTTCAGGTAGTTTCTTGCTGTCAACTTGATCTTGAAGATAAATTTTGTTGAATGCGATGGCTTTATCATTAGTTTGTATGACTGATACTTTGTGAAAATTTAAGAATGTTCTAGCATGTGTTATATCCATTCTAATTGTCTATTATGGTTCCACATTTATTTTTAACCATTAATATTTTATTTGGGTATAGAGAGCTGTACTCGGAAAGTATATGAACTAGCTAGTGTCTTTCTCTCTAAATTTCTCTTCTTCTATCACTTCCATCGATCATCAATTTTGTGGTTGACGTGCTCAGGATTATTTGTCAAAGCTAGAGGCATTGGAAGAGAACATTTTGCAGAAGGAAGGTCAGATAACAATATTGAAAGACACACTTGGGAGTAAATCTATTGAATTTCTTGCTCCTCCCAGTTCTACGTGGGAATTTCGACTGCAGTAAAA

mRNA sequence

ATCGTTTGCCACTTGCAATGGGAAAAAAGAAATTAGCTCTTCCATCAACAAATGACAGCGAAGTAGTCCCCAATGTTCCAAGGAAGCAAATAGATGATAGTGAAAGGTCCAGCACCAGTCCTAAACTTAGAAGGACCCGCTCGGGACCTGTTAGGCCATGCTCCAGAACTTGCTATGATTCGTCAGGAAATTCTTCCACTAGCTCCAGTACTGTTTCAAATGGAGTCTTAGCCCGCTACATTGATGGTGAACAACATCGGGAAATAAATGGATCCATGAATAAGTATTCTCAGAGAAGTAACGGGTGGCGGCCTCCTCGAGCACAGTGTCTGCCACCTTCTTCAACAACAGCTACAGATAAACCCAGATTCTATTCATCAAGAGAAGCTAAATGTTCTTTTCCTCGTTTCTTGTCTGAAGAAGTGGGAGAATATGGATTTGGGAATGACTCACCTCGAAGTATTGCAAAGACCGTTGTTAACAGACTCTCACAACATCATGCTGTGCCTAAAGCGACCTCTAAAGAGCTTGGTGAAAATATACCCATCAAAGTTACAGACAATGGGAGTGAGAGTGGTGATATAACCATCAAGTTGGATAGTGAAATGTCAACTCGTGTTTACCATCTTCAAAATCAAGGTCTGTTCATCAAAGAGAAAGTTGGTCGGTTTCATCCAACCGAGCATAGAATAGAGCATATCAAGAATTGTTTGGATGGACAATTTTTTCTTGAATCTGAAACGAAAATTCGGGGCTTCAAGCATAGGATTGAGAGCTTGACAAAGAGTTTACAGAAACTATCTATATTGTTGCAAGCGAAGTCTGATCCCAGTTCACTGAGTTTTGGTGTAAACAATGCACTACAACTCAATATTTTGGATGGTTTAAGATCTGAGCTAGAAGCAGAAACTTTATTTTCAAGACTATTGAGAGAGAAACTATACTCTAAGGAGCTGGAAGTGGAGCAGTTGCAAGCTGAACTGGTGACAGCAGTAAGAGGGCCTTTCCTGCTAAAATGTGAAATCCAGAATGCGATGGCCTTTCCTGCCTGCCTTTCCTGCCTTACTCATACGATGAAAGATCTCGAACTTCAGGATTATTTGTCAAAGCTAGAGGCATTGGAAGAGAACATTTTGCAGAAGGAAGGTCAGATAACAATATTGAAAGACACACTTGGGAGTAAATCTATTGAATTTCTTGCTCCTCCCAGTTCTACGTGGGAATTTCGACTGCAGTAAAA

Coding sequence (CDS)

ATGGGAAAAAAGAAATTAGCTCTTCCATCAACAAATGACAGCGAAGTAGTCCCCAATGTTCCAAGGAAGCAAATAGATGATAGTGAAAGGTCCAGCACCAGTCCTAAACTTAGAAGGACCCGCTCGGGACCTGTTAGGCCATGCTCCAGAACTTGCTATGATTCGTCAGGAAATTCTTCCACTAGCTCCAGTACTGTTTCAAATGGAGTCTTAGCCCGCTACATTGATGGTGAACAACATCGGGAAATAAATGGATCCATGAATAAGTATTCTCAGAGAAGTAACGGGTGGCGGCCTCCTCGAGCACAGTGTCTGCCACCTTCTTCAACAACAGCTACAGATAAACCCAGATTCTATTCATCAAGAGAAGCTAAATGTTCTTTTCCTCGTTTCTTGTCTGAAGAAGTGGGAGAATATGGATTTGGGAATGACTCACCTCGAAGTATTGCAAAGACCGTTGTTAACAGACTCTCACAACATCATGCTGTGCCTAAAGCGACCTCTAAAGAGCTTGGTGAAAATATACCCATCAAAGTTACAGACAATGGGAGTGAGAGTGGTGATATAACCATCAAGTTGGATAGTGAAATGTCAACTCGTGTTTACCATCTTCAAAATCAAGGTCTGTTCATCAAAGAGAAAGTTGGTCGGTTTCATCCAACCGAGCATAGAATAGAGCATATCAAGAATTGTTTGGATGGACAATTTTTTCTTGAATCTGAAACGAAAATTCGGGGCTTCAAGCATAGGATTGAGAGCTTGACAAAGAGTTTACAGAAACTATCTATATTGTTGCAAGCGAAGTCTGATCCCAGTTCACTGAGTTTTGGTGTAAACAATGCACTACAACTCAATATTTTGGATGGTTTAAGATCTGAGCTAGAAGCAGAAACTTTATTTTCAAGACTATTGAGAGAGAAACTATACTCTAAGGAGCTGGAAGTGGAGCAGTTGCAAGCTGAACTGGTGACAGCAGTAAGAGGGCCTTTCCTGCTAAAATGTGAAATCCAGAATGCGATGGCCTTTCCTGCCTGCCTTTCCTGCCTTACTCATACGATGAAAGATCTCGAACTTCAGGATTATTTGTCAAAGCTAGAGGCATTGGAAGAGAACATTTTGCAGAAGGAAGGTCAGATAACAATATTGAAAGACACACTTGGGAGTAAATCTATTGAATTTCTTGCTCCTCCCAGTTCTACGTGGGAATTTCGACTGCAGTAA

Protein sequence

MGKKKLALPSTNDSEVVPNVPRKQIDDSERSSTSPKLRRTRSGPVRPCSRTCYDSSGNSSTSSSTVSNGVLARYIDGEQHREINGSMNKYSQRSNGWRPPRAQCLPPSSTTATDKPRFYSSREAKCSFPRFLSEEVGEYGFGNDSPRSIAKTVVNRLSQHHAVPKATSKELGENIPIKVTDNGSESGDITIKLDSEMSTRVYHLQNQGLFIKEKVGRFHPTEHRIEHIKNCLDGQFFLESETKIRGFKHRIESLTKSLQKLSILLQAKSDPSSLSFGVNNALQLNILDGLRSELEAETLFSRLLREKLYSKELEVEQLQAELVTAVRGPFLLKCEIQNAMAFPACLSCLTHTMKDLELQDYLSKLEALEENILQKEGQITILKDTLGSKSIEFLAPPSSTWEFRLQ
Homology
BLAST of Cp4.1LG01g10470 vs. NCBI nr
Match: XP_022956804.1 (uncharacterized protein LOC111458393 [Cucurbita moschata])

HSP 1 Score: 657 bits (1695), Expect = 1.12e-233
Identity = 377/514 (73.35%), Postives = 381/514 (74.12%), Query Frame = 0

Query: 3   KKKLALPSTNDSEVVPNVP---------------------------RKQIDDSERSSTSP 62
           KKKLALPSTNDSE     P                           RKQIDDSERSSTSP
Sbjct: 4   KKKLALPSTNDSEACWEHPLESRANTSIGDEAGSSPQCSKDLSSKSRKQIDDSERSSTSP 63

Query: 63  KLRRT------------------------------------------------------- 122
           KLRRT                                                       
Sbjct: 64  KLRRTWSLSSAAFRDQGQINFYSSSDPSRSPGNASSGSRRQHEQSSCPSREMKFKVKHAQ 123

Query: 123 --------RSGPVRPCSRTCYDSSGNSSTSSSTVSNGVLARYIDGEQHREINGSMNKYSQ 182
                    SGPVRPCSRTCYDSSGNSSTSSSTVSNGVLARYIDGEQHR INGSMNKYSQ
Sbjct: 124 MEMPNDYHSSGPVRPCSRTCYDSSGNSSTSSSTVSNGVLARYIDGEQHRGINGSMNKYSQ 183

Query: 183 RSNGWRPPRAQCLPPSSTTA--TDKPRFYSSREAKCSFPRFLSEEVGEYGFGNDSPRSIA 242
           RSNGWRPPRAQCLPPSSTTA   DKPRFYSSREAKCS PRFLSEEVGEYGFGNDSPRSIA
Sbjct: 184 RSNGWRPPRAQCLPPSSTTARIADKPRFYSSREAKCSLPRFLSEEVGEYGFGNDSPRSIA 243

Query: 243 KTVVNRLSQHHAVPKATSKELGENIPIKVTDNGSESGDITIKLDSEMSTRVYHLQNQGL- 302
           +TVVNRLSQHHAVPKATSKELGENIPIKVTDNGSESGDITIKLDSEMSTRVYHLQNQGL 
Sbjct: 244 ETVVNRLSQHHAVPKATSKELGENIPIKVTDNGSESGDITIKLDSEMSTRVYHLQNQGLV 303

Query: 303 --------------FIKEKVGRFHPTEHRIEHIKNCLDGQFFLESETKIRGFKHRIESLT 362
                         FIKEKVGRFHPTEHRIEHIKNCLDGQFFLESETKIRGFKHRIESLT
Sbjct: 304 LLNESTQFCSNLLEFIKEKVGRFHPTEHRIEHIKNCLDGQFFLESETKIRGFKHRIESLT 363

Query: 363 KSLQKLSILLQAKSDPSSLSFGVNNALQLNIL---DGLRSELEAETLFSRLLREKLYSKE 406
            SLQKLSILLQAKSDPSSLS GV+NALQLN     DGLRSELEAETLFSRLLREKLYSKE
Sbjct: 364 MSLQKLSILLQAKSDPSSLSSGVDNALQLNSQYPEDGLRSELEAETLFSRLLREKLYSKE 423

BLAST of Cp4.1LG01g10470 vs. NCBI nr
Match: KAG7031838.1 (hypothetical protein SDJN02_05879, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 508 bits (1309), Expect = 2.12e-177
Identity = 283/345 (82.03%), Postives = 290/345 (84.06%), Query Frame = 0

Query: 92  QRSNGWRPPRAQCLPPSSTTA--TDKPRFYSSREAKCSFPRFLSEEVGEYGFGNDSPRSI 151
           QRSNGWRPP AQCLPPSSTTA   DKP   S  + K S PRFLSEEVGEYGFGNDSPRSI
Sbjct: 20  QRSNGWRPPGAQCLPPSSTTARIADKPD--SIHQEKLSLPRFLSEEVGEYGFGNDSPRSI 79

Query: 152 AKTVVNRLSQHHAVPKATSKELGENIPIKVTDNGSESGDITIKLDSEMSTRVYHLQNQGL 211
           A+TVVNRLSQHHAVPKATSKELGENIPIKVTDNGSESGDITIKLDS MSTRVYHLQNQGL
Sbjct: 80  AETVVNRLSQHHAVPKATSKELGENIPIKVTDNGSESGDITIKLDSVMSTRVYHLQNQGL 139

Query: 212 ---------------FIKEKVGRFHPTEHRIEH----IKNCLDGQFFLESETKIRGFKHR 271
                          FIKEKVGRFHPTEHRIEH    IKNCLDGQFFLESETKIRGFKHR
Sbjct: 140 VLLNESTQFCSNLLEFIKEKVGRFHPTEHRIEHRIEHIKNCLDGQFFLESETKIRGFKHR 199

Query: 272 IESLTKSLQKLSILLQAKSDPSSLSFGVNNALQLN---------ILDGLRSELEAETLFS 331
           IE+LT SLQKLSILLQAKSDPSSLS GV+NALQLN           DGLRSELEAETLFS
Sbjct: 200 IENLTMSLQKLSILLQAKSDPSSLSSGVDNALQLNSQYPEFYFTCYDGLRSELEAETLFS 259

Query: 332 RLLREKLYSKELEVEQLQAELVTAVRGPFLLKCEIQNAMAFPACLSCLTHTMKDLELQDY 391
           RLL+EKLYSKELEVEQLQAELVTAVRG  +LKCEIQN M     LSCLTHTMK LELQDY
Sbjct: 260 RLLKEKLYSKELEVEQLQAELVTAVRGNDILKCEIQNVMDS---LSCLTHTMKYLELQDY 319

Query: 392 LSKLEALEENILQKEGQITILKDTLGSKSIEFLAPPSSTWEFRLQ 406
           LSKL+ALEENIL KEGQITILKDTLGSKSIEFLAPPSSTWEFRLQ
Sbjct: 320 LSKLQALEENILLKEGQITILKDTLGSKSIEFLAPPSSTWEFRLQ 359

BLAST of Cp4.1LG01g10470 vs. NCBI nr
Match: XP_038893371.1 (rho-associated protein kinase 1 isoform X1 [Benincasa hispida] >XP_038893372.1 rho-associated protein kinase 1 isoform X1 [Benincasa hispida])

HSP 1 Score: 365 bits (937), Expect = 4.10e-114
Identity = 320/918 (34.86%), Postives = 348/918 (37.91%), Query Frame = 0

Query: 2   GKKKLALPSTNDSEV--------------------VPNVPR--KQIDDSERSSTSPKLRR 61
           GK  LALPSTN+SE                      P   R  KQIDDSERSST PKLRR
Sbjct: 14  GKHNLALPSTNESETHLEHPLEGRKSSSISDKAGSSPQSTRSGKQIDDSERSSTGPKLRR 73

Query: 62  TRS--------------------------------------------------------- 121
           TRS                                                         
Sbjct: 74  TRSLSSAAFRDQGQIDFYGSSDPSRSPGNASSGFKRQHEQSSRCQSPSREMQFKAKQLEM 133

Query: 122 -------GPVRPCSRTCYDSSGNSSTSSSTVSNGVLARYIDGEQHREINGSMNKYSQRSN 181
                  GPVRPCSRTCYDSSGNSS S S+VSN VL RYIDGEQH+EINGSMNK  QR+N
Sbjct: 134 PHDYYTSGPVRPCSRTCYDSSGNSSNSVSSVSNRVLDRYIDGEQHQEINGSMNKCFQRNN 193

Query: 182 GWRPPRAQCLPPSSTTAT--DKPRFYSSREAKCSFPRFLSEEVGEYGFGNDSPRSIAKTV 241
           GWRPPRAQCL  +ST+A+  DKPR YSSREAK S  R LS EV EYGFGNDSPRSIAK V
Sbjct: 194 GWRPPRAQCLLHASTSASIKDKPRSYSSREAKSSHSRLLSGEVVEYGFGNDSPRSIAKNV 253

Query: 242 VNRLSQHHAVPKATSKELGENIPIKVTD-------------------------------- 301
           V+RLSQHH VPKATSKEL ENIPI VTD                                
Sbjct: 254 VDRLSQHHVVPKATSKELDENIPITVTDIHSRSSNGCFDPNSDLATQPCFPTDEPWETVS 313

Query: 302 ------------------------------------------------------------ 361
                                                                       
Sbjct: 314 GHIYESCKPGETNEDFDGELQKRAKEAEERVVFLSEELEQERFNQYRKFDVSDLIQIIKN 373

Query: 362 ------------------------------------------------------------ 406
                                                                       
Sbjct: 374 LNGERFTLALEISNLLQSRIADRTCARKELRQANAELESRTLKLEKEKIELQVGLEKELD 433

BLAST of Cp4.1LG01g10470 vs. NCBI nr
Match: XP_011654928.1 (golgin subfamily A member 6-like protein 6 [Cucumis sativus] >XP_031741443.1 golgin subfamily A member 6-like protein 6 [Cucumis sativus] >KGN50489.1 hypothetical protein Csa_000087 [Cucumis sativus])

HSP 1 Score: 362 bits (930), Expect = 4.13e-113
Identity = 312/915 (34.10%), Postives = 348/915 (38.03%), Query Frame = 0

Query: 2   GKKKLALPSTNDSEV-----------------VPNVPR--KQIDDSERSSTSPKLRRTRS 61
           GK   A+PSTN+SE                   P   R  K IDDSER  T PKLRRTRS
Sbjct: 14  GKNNSAIPSTNESETHWENPLESRTSSSKAGSSPQSTRSGKHIDDSERFGTGPKLRRTRS 73

Query: 62  ------------------------------------------------------------ 121
                                                                       
Sbjct: 74  LSSAAFRDQGQIDFYGSSDPSRSPGNSSSGFKRQHEPSSRCQSPSREMQFNAKQMEMPND 133

Query: 122 ----GPVRPCSRTCYDSSGNSSTSSSTVSNGVLARYIDGEQHREINGSMNKYSQRSNGWR 181
               G +RP SRTCYDSSGNSSTS S+VSN VL RYIDGEQH+EINGSM+K SQRSNGWR
Sbjct: 134 YYASGSIRPSSRTCYDSSGNSSTSVSSVSNRVLDRYIDGEQHQEINGSMSKCSQRSNGWR 193

Query: 182 PPRAQCLPPSSTTAT--DKPRFYSSREAKCSFPRFLSEEVGEYGFGNDSPRSIAKTVVNR 241
           PPRAQCLP +STTA+  DKPR YSSREAK S  R LSEEVGEYGFGNDSPRSIAKTVV++
Sbjct: 194 PPRAQCLPYTSTTASIKDKPRSYSSREAKGSISRLLSEEVGEYGFGNDSPRSIAKTVVDK 253

Query: 242 LSQHHAVPKATSKELGENIPIKVTD----------------------------------- 301
           LSQHH VPKATS+ELGEN+PI VTD                                   
Sbjct: 254 LSQHHVVPKATSRELGENVPITVTDIHTRSSNECFDPNSDLGNQPCFPTDAPWKTVSGHM 313

Query: 302 ------------------------------------------------------------ 361
                                                                       
Sbjct: 314 YETYKPGETNEDFDGELQKRAKEAEERVMFLSEELEQERFNQYRKFDVSDLIQIIRILTG 373

Query: 362 ------------------------------------------------------------ 406
                                                                       
Sbjct: 374 ERFTLALEISNLLQSRIADRTCAREELRQANAELESRTQKLEKEKIELQVGLEKELDRRS 433

BLAST of Cp4.1LG01g10470 vs. NCBI nr
Match: XP_008445818.1 (PREDICTED: rho-associated protein kinase 1 [Cucumis melo] >XP_008445819.1 PREDICTED: rho-associated protein kinase 1 [Cucumis melo] >KAA0034026.1 rho-associated protein kinase 1 [Cucumis melo var. makuwa])

HSP 1 Score: 349 bits (895), Expect = 5.69e-108
Identity = 284/792 (35.86%), Postives = 317/792 (40.03%), Query Frame = 0

Query: 42  SGPVRPCSRTCYDSSGNSSTSSSTVSNGVLARYIDGEQHREINGSMNKYSQRSNGWRPPR 101
           SG VRP SR CYDSSGNSSTS S+VSN VL RYIDGEQH+EINGSMNK SQR+NGWRPPR
Sbjct: 137 SGFVRPSSRACYDSSGNSSTSVSSVSNRVLDRYIDGEQHQEINGSMNKCSQRNNGWRPPR 196

Query: 102 AQCLPPSSTTAT--DKPRFYSSREAKCSFPRFLSEEVGEYGFGNDSPRSIAKTVVNRLSQ 161
           AQCLP +STTA+  DKPR YSSREAK S    LSEEVGEYGFGNDSP+SIAKTVV+RLSQ
Sbjct: 197 AQCLPHTSTTASIKDKPRSYSSREAKGSISHLLSEEVGEYGFGNDSPQSIAKTVVDRLSQ 256

Query: 162 HHAVPKATSKELGENIPIKVTD-------------------------------------- 221
           HH VPKA S+ELGEN+PI VTD                                      
Sbjct: 257 HHVVPKANSRELGENVPITVTDIHTRSSNGCFDPNSDLANQPCFPTDAPWKTVSEHMYET 316

Query: 222 ------------------------------------------------------------ 281
                                                                       
Sbjct: 317 CKPSETNEDFDGELQKRAKEAEERVMYLSEELEQERFNQYRKFDVSDLIQIIKILTGERF 376

Query: 282 ------------------------------------------------------------ 341
                                                                       
Sbjct: 377 TFALEISNLLQSRIADRTCAREELRQANAELESRTQKLEKEKIELQVGLEKELDRRSNDW 436

Query: 342 ------------------------------------------------------------ 401
                                                                       
Sbjct: 437 SFKLEKYQLEEEGLRGRVRELAEQNVSLQREVSSLNKMVTENRTITTNLEQNIVDLTAKI 496

Query: 402 ------------------------------------------------------------ 406
                                                                       
Sbjct: 497 DEKNEENKYLQINLSKLEEDYRGAIEGMDCIRKNYEEKEKECKDLHKSITRLSRTCNEQE 556

BLAST of Cp4.1LG01g10470 vs. ExPASy TrEMBL
Match: A0A6J1H041 (uncharacterized protein LOC111458393 OS=Cucurbita moschata OX=3662 GN=LOC111458393 PE=4 SV=1)

HSP 1 Score: 657 bits (1695), Expect = 5.43e-234
Identity = 377/514 (73.35%), Postives = 381/514 (74.12%), Query Frame = 0

Query: 3   KKKLALPSTNDSEVVPNVP---------------------------RKQIDDSERSSTSP 62
           KKKLALPSTNDSE     P                           RKQIDDSERSSTSP
Sbjct: 4   KKKLALPSTNDSEACWEHPLESRANTSIGDEAGSSPQCSKDLSSKSRKQIDDSERSSTSP 63

Query: 63  KLRRT------------------------------------------------------- 122
           KLRRT                                                       
Sbjct: 64  KLRRTWSLSSAAFRDQGQINFYSSSDPSRSPGNASSGSRRQHEQSSCPSREMKFKVKHAQ 123

Query: 123 --------RSGPVRPCSRTCYDSSGNSSTSSSTVSNGVLARYIDGEQHREINGSMNKYSQ 182
                    SGPVRPCSRTCYDSSGNSSTSSSTVSNGVLARYIDGEQHR INGSMNKYSQ
Sbjct: 124 MEMPNDYHSSGPVRPCSRTCYDSSGNSSTSSSTVSNGVLARYIDGEQHRGINGSMNKYSQ 183

Query: 183 RSNGWRPPRAQCLPPSSTTA--TDKPRFYSSREAKCSFPRFLSEEVGEYGFGNDSPRSIA 242
           RSNGWRPPRAQCLPPSSTTA   DKPRFYSSREAKCS PRFLSEEVGEYGFGNDSPRSIA
Sbjct: 184 RSNGWRPPRAQCLPPSSTTARIADKPRFYSSREAKCSLPRFLSEEVGEYGFGNDSPRSIA 243

Query: 243 KTVVNRLSQHHAVPKATSKELGENIPIKVTDNGSESGDITIKLDSEMSTRVYHLQNQGL- 302
           +TVVNRLSQHHAVPKATSKELGENIPIKVTDNGSESGDITIKLDSEMSTRVYHLQNQGL 
Sbjct: 244 ETVVNRLSQHHAVPKATSKELGENIPIKVTDNGSESGDITIKLDSEMSTRVYHLQNQGLV 303

Query: 303 --------------FIKEKVGRFHPTEHRIEHIKNCLDGQFFLESETKIRGFKHRIESLT 362
                         FIKEKVGRFHPTEHRIEHIKNCLDGQFFLESETKIRGFKHRIESLT
Sbjct: 304 LLNESTQFCSNLLEFIKEKVGRFHPTEHRIEHIKNCLDGQFFLESETKIRGFKHRIESLT 363

Query: 363 KSLQKLSILLQAKSDPSSLSFGVNNALQLNIL---DGLRSELEAETLFSRLLREKLYSKE 406
            SLQKLSILLQAKSDPSSLS GV+NALQLN     DGLRSELEAETLFSRLLREKLYSKE
Sbjct: 364 MSLQKLSILLQAKSDPSSLSSGVDNALQLNSQYPEDGLRSELEAETLFSRLLREKLYSKE 423

BLAST of Cp4.1LG01g10470 vs. ExPASy TrEMBL
Match: A0A0A0KNP2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G177090 PE=4 SV=1)

HSP 1 Score: 362 bits (930), Expect = 2.00e-113
Identity = 312/915 (34.10%), Postives = 348/915 (38.03%), Query Frame = 0

Query: 2   GKKKLALPSTNDSEV-----------------VPNVPR--KQIDDSERSSTSPKLRRTRS 61
           GK   A+PSTN+SE                   P   R  K IDDSER  T PKLRRTRS
Sbjct: 14  GKNNSAIPSTNESETHWENPLESRTSSSKAGSSPQSTRSGKHIDDSERFGTGPKLRRTRS 73

Query: 62  ------------------------------------------------------------ 121
                                                                       
Sbjct: 74  LSSAAFRDQGQIDFYGSSDPSRSPGNSSSGFKRQHEPSSRCQSPSREMQFNAKQMEMPND 133

Query: 122 ----GPVRPCSRTCYDSSGNSSTSSSTVSNGVLARYIDGEQHREINGSMNKYSQRSNGWR 181
               G +RP SRTCYDSSGNSSTS S+VSN VL RYIDGEQH+EINGSM+K SQRSNGWR
Sbjct: 134 YYASGSIRPSSRTCYDSSGNSSTSVSSVSNRVLDRYIDGEQHQEINGSMSKCSQRSNGWR 193

Query: 182 PPRAQCLPPSSTTAT--DKPRFYSSREAKCSFPRFLSEEVGEYGFGNDSPRSIAKTVVNR 241
           PPRAQCLP +STTA+  DKPR YSSREAK S  R LSEEVGEYGFGNDSPRSIAKTVV++
Sbjct: 194 PPRAQCLPYTSTTASIKDKPRSYSSREAKGSISRLLSEEVGEYGFGNDSPRSIAKTVVDK 253

Query: 242 LSQHHAVPKATSKELGENIPIKVTD----------------------------------- 301
           LSQHH VPKATS+ELGEN+PI VTD                                   
Sbjct: 254 LSQHHVVPKATSRELGENVPITVTDIHTRSSNECFDPNSDLGNQPCFPTDAPWKTVSGHM 313

Query: 302 ------------------------------------------------------------ 361
                                                                       
Sbjct: 314 YETYKPGETNEDFDGELQKRAKEAEERVMFLSEELEQERFNQYRKFDVSDLIQIIRILTG 373

Query: 362 ------------------------------------------------------------ 406
                                                                       
Sbjct: 374 ERFTLALEISNLLQSRIADRTCAREELRQANAELESRTQKLEKEKIELQVGLEKELDRRS 433

BLAST of Cp4.1LG01g10470 vs. ExPASy TrEMBL
Match: A0A1S3BDK7 (rho-associated protein kinase 1 OS=Cucumis melo OX=3656 GN=LOC103488729 PE=4 SV=1)

HSP 1 Score: 349 bits (895), Expect = 2.76e-108
Identity = 284/792 (35.86%), Postives = 317/792 (40.03%), Query Frame = 0

Query: 42  SGPVRPCSRTCYDSSGNSSTSSSTVSNGVLARYIDGEQHREINGSMNKYSQRSNGWRPPR 101
           SG VRP SR CYDSSGNSSTS S+VSN VL RYIDGEQH+EINGSMNK SQR+NGWRPPR
Sbjct: 137 SGFVRPSSRACYDSSGNSSTSVSSVSNRVLDRYIDGEQHQEINGSMNKCSQRNNGWRPPR 196

Query: 102 AQCLPPSSTTAT--DKPRFYSSREAKCSFPRFLSEEVGEYGFGNDSPRSIAKTVVNRLSQ 161
           AQCLP +STTA+  DKPR YSSREAK S    LSEEVGEYGFGNDSP+SIAKTVV+RLSQ
Sbjct: 197 AQCLPHTSTTASIKDKPRSYSSREAKGSISHLLSEEVGEYGFGNDSPQSIAKTVVDRLSQ 256

Query: 162 HHAVPKATSKELGENIPIKVTD-------------------------------------- 221
           HH VPKA S+ELGEN+PI VTD                                      
Sbjct: 257 HHVVPKANSRELGENVPITVTDIHTRSSNGCFDPNSDLANQPCFPTDAPWKTVSEHMYET 316

Query: 222 ------------------------------------------------------------ 281
                                                                       
Sbjct: 317 CKPSETNEDFDGELQKRAKEAEERVMYLSEELEQERFNQYRKFDVSDLIQIIKILTGERF 376

Query: 282 ------------------------------------------------------------ 341
                                                                       
Sbjct: 377 TFALEISNLLQSRIADRTCAREELRQANAELESRTQKLEKEKIELQVGLEKELDRRSNDW 436

Query: 342 ------------------------------------------------------------ 401
                                                                       
Sbjct: 437 SFKLEKYQLEEEGLRGRVRELAEQNVSLQREVSSLNKMVTENRTITTNLEQNIVDLTAKI 496

Query: 402 ------------------------------------------------------------ 406
                                                                       
Sbjct: 497 DEKNEENKYLQINLSKLEEDYRGAIEGMDCIRKNYEEKEKECKDLHKSITRLSRTCNEQE 556

BLAST of Cp4.1LG01g10470 vs. ExPASy TrEMBL
Match: A0A5A7SVN4 (Rho-associated protein kinase 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G00100 PE=4 SV=1)

HSP 1 Score: 349 bits (895), Expect = 2.76e-108
Identity = 284/792 (35.86%), Postives = 317/792 (40.03%), Query Frame = 0

Query: 42  SGPVRPCSRTCYDSSGNSSTSSSTVSNGVLARYIDGEQHREINGSMNKYSQRSNGWRPPR 101
           SG VRP SR CYDSSGNSSTS S+VSN VL RYIDGEQH+EINGSMNK SQR+NGWRPPR
Sbjct: 137 SGFVRPSSRACYDSSGNSSTSVSSVSNRVLDRYIDGEQHQEINGSMNKCSQRNNGWRPPR 196

Query: 102 AQCLPPSSTTAT--DKPRFYSSREAKCSFPRFLSEEVGEYGFGNDSPRSIAKTVVNRLSQ 161
           AQCLP +STTA+  DKPR YSSREAK S    LSEEVGEYGFGNDSP+SIAKTVV+RLSQ
Sbjct: 197 AQCLPHTSTTASIKDKPRSYSSREAKGSISHLLSEEVGEYGFGNDSPQSIAKTVVDRLSQ 256

Query: 162 HHAVPKATSKELGENIPIKVTD-------------------------------------- 221
           HH VPKA S+ELGEN+PI VTD                                      
Sbjct: 257 HHVVPKANSRELGENVPITVTDIHTRSSNGCFDPNSDLANQPCFPTDAPWKTVSEHMYET 316

Query: 222 ------------------------------------------------------------ 281
                                                                       
Sbjct: 317 CKPSETNEDFDGELQKRAKEAEERVMYLSEELEQERFNQYRKFDVSDLIQIIKILTGERF 376

Query: 282 ------------------------------------------------------------ 341
                                                                       
Sbjct: 377 TFALEISNLLQSRIADRTCAREELRQANAELESRTQKLEKEKIELQVGLEKELDRRSNDW 436

Query: 342 ------------------------------------------------------------ 401
                                                                       
Sbjct: 437 SFKLEKYQLEEEGLRGRVRELAEQNVSLQREVSSLNKMVTENRTITTNLEQNIVDLTAKI 496

Query: 402 ------------------------------------------------------------ 406
                                                                       
Sbjct: 497 DEKNEENKYLQINLSKLEEDYRGAIEGMDCIRKNYEEKEKECKDLHKSITRLSRTCNEQE 556

BLAST of Cp4.1LG01g10470 vs. ExPASy TrEMBL
Match: A0A6J1CAU5 (myosin-13 OS=Momordica charantia OX=3673 GN=LOC111009977 PE=4 SV=1)

HSP 1 Score: 335 bits (860), Expect = 4.90e-103
Identity = 288/885 (32.54%), Postives = 328/885 (37.06%), Query Frame = 0

Query: 24  QIDDSERSSTSPKLRRTRS----------------------------------------- 83
           Q +D ERSSTSPKLRRTRS                                         
Sbjct: 57  QTNDIERSSTSPKLRRTRSLSSAAFGDQGQMNFYGPSDPSRSPGSQRQHEQSSRCQGPTW 116

Query: 84  -----------------GPVRPCSRTCYDSSGNSSTSSSTVSNGVLARYIDGEQHREING 143
                            GPVRPCS+TCYDSSGNSSTSSS VSN VL RYIDGEQH+EI+G
Sbjct: 117 EMQFKVKQMEVPNDYYTGPVRPCSKTCYDSSGNSSTSSSNVSNRVLDRYIDGEQHQEISG 176

Query: 144 SMNKYSQRSNGWRPPRAQCLPPSSTTAT--DKPRFYSSREAKCSFPRFLSEEVGEYGFGN 203
           S NKYSQ++NGWRPPRAQCL PSS TA+  DKPR YSSRE K S  RF S E+GEYGFGN
Sbjct: 177 SKNKYSQKNNGWRPPRAQCLTPSSPTASIKDKPRSYSSREVKSSHSRFSSRELGEYGFGN 236

Query: 204 DSPRSIAKTVVNRLSQHHAVPKATSKELGENIPIKVTD---------------------- 263
           +SPRSIAK VV+RLSQ+H +PKATSKELGEN+PI+ TD                      
Sbjct: 237 ESPRSIAKNVVDRLSQYHVLPKATSKELGENVPIRTTDIQNQSLNGCYDPNLDVVTRPCF 296

Query: 264 ------------------------------------------------------------ 323
                                                                       
Sbjct: 297 PTDEPCETVSGPHTEELSGFHKQKISPGRMYEGCKSGETDGDLDGELQRSVKEADERIMF 356

Query: 324 ------------------------------------------------------------ 383
                                                                       
Sbjct: 357 LSEELEQERFVQYRKFDVSDLIQVIKNLSEDRFTLALEISSLLQSRIADRESAKEELRQA 416

Query: 384 ------------------------------------------------------------ 406
                                                                       
Sbjct: 417 NAELDSRTRKLEKEKTELQLGLEKELDRRSSDWSFKLEKYKLEEQGLRGRVRELAEQNVS 476

BLAST of Cp4.1LG01g10470 vs. TAIR 10
Match: AT3G55060.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G39300.2); Has 61765 Blast hits to 33720 proteins in 2065 species: Archae - 846; Bacteria - 6964; Metazoa - 31967; Fungi - 5247; Plants - 3104; Viruses - 205; Other Eukaryotes - 13432 (source: NCBI BLink). )

HSP 1 Score: 135.2 bits (339), Expect = 1.2e-31
Identity = 103/301 (34.22%), Postives = 150/301 (49.83%), Query Frame = 0

Query: 173 ENIPI--KVTDNGSESGDITIKLDSEMSTRVYHLQNQGL---------------FIKEKV 232
           ENI +  ++  NG E    T+KL++E+  RV +LQ QGL               FIK K+
Sbjct: 595 ENICLLNRLKGNGQEIDITTLKLENELKMRVCYLQEQGLSMLNESSQLCYKLLKFIKGKL 654

Query: 233 GRFHPTEHRIEHIKNCLDGQFFLESETKIRGFKHRIESLTKSLQKLSILLQAKSDPSSLS 292
            +   T      +K+ L  QF +ESE K+ G +   E+L +SLQ ++ ++ + S+ SS +
Sbjct: 655 TQLPETYQDKNSVKDGLSEQFMIESEMKVHGIRRGTENLKRSLQTVTSVVASNSESSSSN 714

Query: 293 FG-VNNALQLNILDGLRSELEAETLFSRLLREKLYSKELEVEQLQAELVTAVRGPFLLKC 352
            G        ++ + LR+EL AETL + L+REKLYSKE E+EQLQAEL  AVRG  +L+C
Sbjct: 715 TGRPREQRNQSVEENLRAELSAETLITSLVREKLYSKEKEIEQLQAELAAAVRGNEILRC 774

Query: 353 EIQNAMAFPACLSCLTHTMKDLE--------------------------LQDYLSK---- 398
           E+Q+++     LS  TH +KDL+                          L   LSK    
Sbjct: 775 EVQSSL---DNLSVTTHELKDLKHQMLKKEESIRRLESNLQEAAKEMARLNALLSKVSNE 834


HSP 2 Score: 84.7 bits (208), Expect = 1.8e-16
Identity = 92/330 (27.88%), Postives = 151/330 (45.76%), Query Frame = 0

Query: 11  TNDSEVVPNVPRKQIDDSERSSTSPKLRRTRSGPVRPC--SRTCYDSSGNSSTSSSTVSN 70
           T+ +E+  +  + +  D  R+ +S      R    R C   +  +DSSG+SS+ SS VS+
Sbjct: 74  TSKNELTTSATKSK--DRRRNHSSRCFTPERQVRERQCKADKFQHDSSGSSSSCSSNVSS 133

Query: 71  GVLARYIDGEQHRE-----INGSMNKYSQRSNGWR-PPRAQCLPPSSTTAT--DKPRFYS 130
            VL RYIDGE+H E      N S +  S+  N  R PPR Q   P+S + T  +K +  S
Sbjct: 134 KVLDRYIDGEEHLEPCKQKSNSSHSGVSESINRRRLPPRVQWTVPTSPSDTFDEKRKSQS 193

Query: 131 SREAKCSFPRFLSEEVGEYGFGNDSPRSIAKTVVNRLSQHHAVPKATSKELGENIPIKVT 190
            REAK +  R+ S +  + G  + SPRS+A+ V+ RLSQ H   K ++ E     PI + 
Sbjct: 194 FREAKGTHLRYSSADCVDNGLRHGSPRSVARNVIERLSQTHGKSKGSNHE-----PITIQ 253

Query: 191 DNGSESGDITIKLDSEMSTRV---YHLQNQGLFIKEKVGRFHPTEHRIEHIKNCLDGQFF 250
           D    S + T    S+++  V    H +    +  +  G       R  ++  C++    
Sbjct: 254 DVYGGSLNRTFDSSSDIAANVSLAEHYEPVNEYYTQDYGGHQQNCIRSRNVYKCMEDDLD 313

Query: 251 LESETKIRGFKHRIESLTKSLQKLSILLQAKSDPSSLSFGVNNA------LQLNILDGLR 310
            E E KI+  + R +  +  L++   L     D SSL   +         L    ++ LR
Sbjct: 314 SELEMKIKEAEKRAKLFSAELEQQRCLSDCDFDVSSLVGAIRKLEDERLHLAFENVNLLR 373

Query: 311 SELEAETLFSRLLREKLYSKELEVEQLQAE 322
           S++         +R      +L +++L+ E
Sbjct: 374 SQIVERASAREEIRWLKSDWDLHIQRLEKE 396

BLAST of Cp4.1LG01g10470 vs. TAIR 10
Match: AT2G39300.1 (unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G55060.1); Has 46416 Blast hits to 28308 proteins in 1743 species: Archae - 734; Bacteria - 4822; Metazoa - 24446; Fungi - 3539; Plants - 2267; Viruses - 163; Other Eukaryotes - 10445 (source: NCBI BLink). )

HSP 1 Score: 122.5 bits (306), Expect = 7.9e-28
Identity = 107/295 (36.27%), Postives = 146/295 (49.49%), Query Frame = 0

Query: 178 KVTDNGSESGDI-TIKLDSEMSTRVYHLQNQGLFIKEKVGRFHPTEHRIEHIKNCLDG-- 237
           +V  NG E+  + T KLD+EM  RV HLQ+QG+ +  +  +      +I   K+   G  
Sbjct: 547 RVKGNGEEADIMTTFKLDNEMKMRVCHLQDQGISMLNESTQLCYKFLKIIKEKSVNSGWS 606

Query: 238 -QFFLESETKIRGFKHRIESLTKSLQKLSILLQAKSD------PSSLSFGVNNALQLNIL 297
            QF +ESE ++ G +   ESL +SLQ ++ LL  KS+       SS S     + + ++ 
Sbjct: 607 EQFLIESEMRVHGIRRGTESLKRSLQTVTSLLLEKSNEMASNSESSCSSAARPSSR-SVE 666

Query: 298 DGLRSELEAETLFSRLLREKLYSKELEVEQLQAELVTAVRGPFLLKCEIQNAMAFPACLS 357
             LR+EL AETL + LLREKLYSKE E+EQL AE+   VRG  +L+CEIQN +     LS
Sbjct: 667 KSLRAELRAETLVTSLLREKLYSKEQEIEQLHAEVAAGVRGNEVLQCEIQNVL---DNLS 726

Query: 358 CLTHTMKDLELQ-----------------------------------------------D 407
              H +KDL+LQ                                               D
Sbjct: 727 LNNHQLKDLKLQMVKKDENINRMEINLQEAAKELLTLPKVLEEREEMWKEVKECRKRNMD 786

BLAST of Cp4.1LG01g10470 vs. TAIR 10
Match: AT2G39300.2 (unknown protein; INVOLVED IN: biological_process unknown; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G55060.1). )

HSP 1 Score: 122.5 bits (306), Expect = 7.9e-28
Identity = 107/295 (36.27%), Postives = 146/295 (49.49%), Query Frame = 0

Query: 178 KVTDNGSESGDI-TIKLDSEMSTRVYHLQNQGLFIKEKVGRFHPTEHRIEHIKNCLDG-- 237
           +V  NG E+  + T KLD+EM  RV HLQ+QG+ +  +  +      +I   K+   G  
Sbjct: 547 RVKGNGEEADIMTTFKLDNEMKMRVCHLQDQGISMLNESTQLCYKFLKIIKEKSVNSGWS 606

Query: 238 -QFFLESETKIRGFKHRIESLTKSLQKLSILLQAKSD------PSSLSFGVNNALQLNIL 297
            QF +ESE ++ G +   ESL +SLQ ++ LL  KS+       SS S     + + ++ 
Sbjct: 607 EQFLIESEMRVHGIRRGTESLKRSLQTVTSLLLEKSNEMASNSESSCSSAARPSSR-SVE 666

Query: 298 DGLRSELEAETLFSRLLREKLYSKELEVEQLQAELVTAVRGPFLLKCEIQNAMAFPACLS 357
             LR+EL AETL + LLREKLYSKE E+EQL AE+   VRG  +L+CEIQN +     LS
Sbjct: 667 KSLRAELRAETLVTSLLREKLYSKEQEIEQLHAEVAAGVRGNEVLQCEIQNVL---DNLS 726

Query: 358 CLTHTMKDLELQ-----------------------------------------------D 407
              H +KDL+LQ                                               D
Sbjct: 727 LNNHQLKDLKLQMVKKDENINRMEINLQEAAKELLTLPKVLEEREEMWKEVKECRKRNMD 786

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_022956804.11.12e-23373.35uncharacterized protein LOC111458393 [Cucurbita moschata][more]
KAG7031838.12.12e-17782.03hypothetical protein SDJN02_05879, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_038893371.14.10e-11434.86rho-associated protein kinase 1 isoform X1 [Benincasa hispida] >XP_038893372.1 r... [more]
XP_011654928.14.13e-11334.10golgin subfamily A member 6-like protein 6 [Cucumis sativus] >XP_031741443.1 gol... [more]
XP_008445818.15.69e-10835.86PREDICTED: rho-associated protein kinase 1 [Cucumis melo] >XP_008445819.1 PREDIC... [more]
Match NameE-valueIdentityDescription
A0A6J1H0415.43e-23473.35uncharacterized protein LOC111458393 OS=Cucurbita moschata OX=3662 GN=LOC1114583... [more]
A0A0A0KNP22.00e-11334.10Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G177090 PE=4 SV=1[more]
A0A1S3BDK72.76e-10835.86rho-associated protein kinase 1 OS=Cucumis melo OX=3656 GN=LOC103488729 PE=4 SV=... [more]
A0A5A7SVN42.76e-10835.86Rho-associated protein kinase 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_... [more]
A0A6J1CAU54.90e-10332.54myosin-13 OS=Momordica charantia OX=3673 GN=LOC111009977 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT3G55060.11.2e-3134.22unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT2G39300.17.9e-2836.27unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; E... [more]
AT2G39300.27.9e-2836.27unknown protein; INVOLVED IN: biological_process unknown; EXPRESSED IN: 8 plant ... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 301..321
NoneNo IPR availableCOILSCoilCoilcoord: 358..385
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 20..36
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 89..115
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 49..66
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..66
NoneNo IPR availablePANTHERPTHR47491CAP-GLY DOMAIN LINKERcoord: 365..397
NoneNo IPR availablePANTHERPTHR47491CAP-GLY DOMAIN LINKERcoord: 50..163
NoneNo IPR availablePANTHERPTHR47491:SF4CAP-GLY DOMAIN LINKERcoord: 179..360
NoneNo IPR availablePANTHERPTHR47491:SF4CAP-GLY DOMAIN LINKERcoord: 365..397
NoneNo IPR availablePANTHERPTHR47491:SF4CAP-GLY DOMAIN LINKERcoord: 50..163
NoneNo IPR availablePANTHERPTHR47491CAP-GLY DOMAIN LINKERcoord: 179..360

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g10470.1Cp4.1LG01g10470.1mRNA