Cp4.1LG01g10160 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG01g10160
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionGRAM domain-containing protein
LocationCp4.1LG01: 6881104 .. 6882166 (-)
RNA-Seq ExpressionCp4.1LG01g10160
SyntenyCp4.1LG01g10160
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGATCTCTCTCTGTCCCGTGAAAAAGCTTGACAACTCTAGTTCAAATTCGATGTTTAGACATCTTAGAAGAAAAGTTGACAGATTCGTTAATGGAGTCTTTGAACGTGGTAAATTGCAATGTTTTTTTTTTTTTTTCCCTCTTGATTTGAGAGATCTCTCCCTAAATTTTACTTTCGCTACTACATGATTATGATGATGGATTGGATCATCCTCGAAATTTCCATTTCTAGACATGTACGAATGGCAAAATCCCCCCTCCCCACAATTCAATTGACAATTGTTATGCGTTCATCTAAGCATGATTCAACCAGTTGCTTATACGTTCATCTAAGCATAATTCAACCGGTTAAATAAGAAAAGAAGGATCACAAAGCTCATAGAACGCTAAAACCAAAAACTAACGCACTCTTGTTTGTTTCTCTATAAACAAAGATTGGCTAACGTATAACTCAAAAACCAAACCCGATTCAAATGATTACTTGCTTGATGGTTACAACGGAATGATGTCGTGCAGTTAAACTGTCGCCGAACATCACCGAGAATTTGAAGGGAAAGCTGTGGTCTGGGGCAAGACTTGTTCAGTTTGGAGGAAATGAGAAGATCTTTCAGAAAATGTTCAATCTCAGCCAAGGAGAGAAGTTACTAAGTTGTTCACGCTGTTATTTGTCAACCACAGCAGGTCCCGTAGCAGGCCTCCTCTTTATCTCCACCCATGTGGTTGCCTTCTGCAGTGACAGACCAATCGTCATCTCTTCTTCAGAAGGAGAACTGGGCAGATTGAACTACAAAGTAATATTATACAACATCCTTCAACATTCACATTAGACTCTCCCTCAATCCCTGTGGTTGCTAACAAGCTTTTTGTACTGTGCTTCATTCATCAGGTTATGATCCCATTGAAGAAGATGAAGAGAGTTAACCAAATAGAGCATATAAACAATCCATCAAAGAAGTACATTCAAGTGGTGACTGTGGATGATTTTGATTTCTGGTTTATGGGTTTTCTGAATTATGAGAAAGCATTCAAGTTCCTCCAAAAGAAGGTTTCTAGAGATTGA

mRNA sequence

ATGAAGATCTCTCTCTGTCCCGTGAAAAAGCTTGACAACTCTAGTTCAAATTCGATGTTTAGACATCTTAGAAGAAAAGTTGACAGATTCGTTAATGGAGTCTTTGAACGTGTTAAACTGTCGCCGAACATCACCGAGAATTTGAAGGGAAAGCTGTGGTCTGGGGCAAGACTTGTTCAGTTTGGAGGAAATGAGAAGATCTTTCAGAAAATGTTCAATCTCAGCCAAGGAGAGAAGTTACTAAGTTGTTCACGCTGTTATTTGTCAACCACAGCAGGTCCCGTAGCAGGCCTCCTCTTTATCTCCACCCATGTGGTTGCCTTCTGCAGTGACAGACCAATCGTCATCTCTTCTTCAGAAGGAGAACTGGGCAGATTGAACTACAAAGTTATGATCCCATTGAAGAAGATGAAGAGAGTTAACCAAATAGAGCATATAAACAATCCATCAAAGAAGTACATTCAAGTGGTGACTGTGGATGATTTTGATTTCTGGTTTATGGGTTTTCTGAATTATGAGAAAGCATTCAAGTTCCTCCAAAAGAAGGTTTCTAGAGATTGA

Coding sequence (CDS)

ATGAAGATCTCTCTCTGTCCCGTGAAAAAGCTTGACAACTCTAGTTCAAATTCGATGTTTAGACATCTTAGAAGAAAAGTTGACAGATTCGTTAATGGAGTCTTTGAACGTGTTAAACTGTCGCCGAACATCACCGAGAATTTGAAGGGAAAGCTGTGGTCTGGGGCAAGACTTGTTCAGTTTGGAGGAAATGAGAAGATCTTTCAGAAAATGTTCAATCTCAGCCAAGGAGAGAAGTTACTAAGTTGTTCACGCTGTTATTTGTCAACCACAGCAGGTCCCGTAGCAGGCCTCCTCTTTATCTCCACCCATGTGGTTGCCTTCTGCAGTGACAGACCAATCGTCATCTCTTCTTCAGAAGGAGAACTGGGCAGATTGAACTACAAAGTTATGATCCCATTGAAGAAGATGAAGAGAGTTAACCAAATAGAGCATATAAACAATCCATCAAAGAAGTACATTCAAGTGGTGACTGTGGATGATTTTGATTTCTGGTTTATGGGTTTTCTGAATTATGAGAAAGCATTCAAGTTCCTCCAAAAGAAGGTTTCTAGAGATTGA

Protein sequence

MKISLCPVKKLDNSSSNSMFRHLRRKVDRFVNGVFERVKLSPNITENLKGKLWSGARLVQFGGNEKIFQKMFNLSQGEKLLSCSRCYLSTTAGPVAGLLFISTHVVAFCSDRPIVISSSEGELGRLNYKVMIPLKKMKRVNQIEHINNPSKKYIQVVTVDDFDFWFMGFLNYEKAFKFLQKKVSRD
Homology
BLAST of Cp4.1LG01g10160 vs. ExPASy Swiss-Prot
Match: Q9FTA0 (GEM-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=At5g08350 PE=2 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 6.2e-49
Identity = 95/176 (53.98%), Postives = 133/176 (75.57%), Query Frame = 0

Query: 9   KKLDNSSSNSMFRHLRRKVDRFVNGVFERVKLSPNITENLKGKLWSGARLVQFGGNEKIF 68
           KK + S+  S+ +  R+K D F NGV ++ K+ P +TE +K KL  GAR++Q GG EKIF
Sbjct: 40  KKSEQSNVKSILK--RKKTDGFTNGVRDQSKIRPKLTETVKRKLSLGARILQVGGLEKIF 99

Query: 69  QKMFNLSQGEKLLSCSRCYLSTTAGPVAGLLFISTHVVAFCSDRPIVISSSEGELGRLNY 128
           +++F +S+GEKL    +CYLSTTAGP+AGLLFIS+  +AFCS+R I + S +G++ R++Y
Sbjct: 100 KRLFRVSEGEKLFKMYQCYLSTTAGPIAGLLFISSKKMAFCSERSIKVDSPQGDIIRVHY 159

Query: 129 KVMIPLKKMKRVNQIEHINNPSKKYIQVVTVDDFDFWFMGFLNYEKAFKFLQKKVS 185
           KV IPL K+ RVNQ ++   PS+KY++VVTVD FDFWFMGFL+Y+KAF  L+K +S
Sbjct: 160 KVSIPLCKIDRVNQSQNTKKPSQKYLEVVTVDGFDFWFMGFLSYQKAFNCLEKALS 213

BLAST of Cp4.1LG01g10160 vs. ExPASy Swiss-Prot
Match: Q9FMW4 (Putative GEM-like protein 8 OS=Arabidopsis thaliana OX=3702 GN=At5g23370 PE=3 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 5.8e-47
Identity = 92/167 (55.09%), Postives = 126/167 (75.45%), Query Frame = 0

Query: 18  SMFRHLRRKVDRFVNGVFERVKLSPNITENLKGKLWSGARLVQFGGNEKIFQKMFNLSQG 77
           SM R  ++K D F NGV ++ KL P +TE +K KL  GAR++Q GG EKI++++F +S  
Sbjct: 50  SMLR--KKKNDSFTNGVRDQDKLGPKLTETVKRKLSLGARILQMGGLEKIYKRLFKVSDE 109

Query: 78  EKLLSCSRCYLSTTAGPVAGLLFISTHVVAFCSDRPIVISSSEGELGRLNYKVMIPLKKM 137
           EKL    +CYLSTTAGP+AGLLFIS+  +AFCS+R I ++S +GEL R++YKV IPL K+
Sbjct: 110 EKLFKAYQCYLSTTAGPIAGLLFISSKKIAFCSERSIKVASPQGELNRVHYKVSIPLCKI 169

Query: 138 KRVNQIEHINNPSKKYIQVVTVDDFDFWFMGFLNYEKAFKFLQKKVS 185
             VNQ ++   PS+KY++VVTVD FDFWFMGFL+Y+KAF  L++ +S
Sbjct: 170 NGVNQSQNTTKPSQKYLEVVTVDGFDFWFMGFLSYQKAFNCLEQALS 214

BLAST of Cp4.1LG01g10160 vs. ExPASy Swiss-Prot
Match: Q9FMW6 (GEM-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=At5g23350 PE=2 SV=2)

HSP 1 Score: 184.1 bits (466), Expect = 1.4e-45
Identity = 86/169 (50.89%), Postives = 125/169 (73.96%), Query Frame = 0

Query: 18  SMFRHLRRKVDRFVNGVFERVKLSPNITENLKGKLWSGARLVQFGGNEKIFQKMFNLSQG 77
           SM R  ++K D F NG  ++ KL P +TE +K KL  GA+++Q GG EKI++++F +   
Sbjct: 50  SMLR--KKKTDSFTNGARDQDKLGPKLTETVKRKLSLGAKILQMGGLEKIYKRLFKVCDQ 109

Query: 78  EKLLSCSRCYLSTTAGPVAGLLFISTHVVAFCSDRPIVISSSEGELGRLNYKVMIPLKKM 137
           EKL    +CYLSTTAGP+AGLLFIS+  +AFCS+R I ++S +G L R++YKV IPL K+
Sbjct: 110 EKLFKAYQCYLSTTAGPIAGLLFISSKKIAFCSERSIKVASPQGVLSRVHYKVSIPLCKI 169

Query: 138 KRVNQIEHINNPSKKYIQVVTVDDFDFWFMGFLNYEKAFKFLQKKVSRD 187
             VNQ ++   PS+KY+++VT+D+FDFWFMGF++Y+KAF  L+K ++ D
Sbjct: 170 NGVNQSQNTKKPSQKYLEIVTIDNFDFWFMGFVSYQKAFNCLEKALNND 216

BLAST of Cp4.1LG01g10160 vs. ExPASy Swiss-Prot
Match: Q9FMW5 (GEM-like protein 7 OS=Arabidopsis thaliana OX=3702 GN=At5g23360 PE=2 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 1.6e-44
Identity = 84/179 (46.93%), Postives = 128/179 (71.51%), Query Frame = 0

Query: 8   VKKLDNSSSNSMFRHLRRKVDRFVNGVFERVKLSPNITENLKGKLWSGARLVQFGGNEKI 67
           + KL   +S+ +    ++K D F NG  ++ KL P +TE +K KL  GA+++Q GG EKI
Sbjct: 30  INKLQIPTSSKVSMLQKKKTDSFTNGARDQDKLGPKLTETVKRKLSLGAKILQMGGLEKI 89

Query: 68  FQKMFNLSQGEKLLSCSRCYLSTTAGPVAGLLFISTHVVAFCSDRPIVISSSEGELGRLN 127
           ++++F +   EKL    +CYLSTT G +AGLLFIS+  +AFCS+R I ++S +G+L R++
Sbjct: 90  YKRLFKVCDKEKLFKAYQCYLSTTEGSIAGLLFISSKKIAFCSERSIKVTSPQGDLTRVH 149

Query: 128 YKVMIPLKKMKRVNQIEHINNPSKKYIQVVTVDDFDFWFMGFLNYEKAFKFLQKKVSRD 187
           YKV IPL K+  VNQ ++   PS++Y++VVTVD++DFWFMGF++Y+KAF  L+K ++ D
Sbjct: 150 YKVSIPLCKINGVNQSQNTKKPSQRYLEVVTVDNYDFWFMGFVSYQKAFNCLEKALNED 208

BLAST of Cp4.1LG01g10160 vs. ExPASy Swiss-Prot
Match: Q9LYV6 (GEM-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=At5g13200 PE=1 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 2.9e-30
Identity = 67/166 (40.36%), Postives = 96/166 (57.83%), Query Frame = 0

Query: 19  MFRHLRRKVDRFVNGVFERVKLSPNITENLKGKLWSGARLVQFGGNEKIFQKMFNLSQGE 78
           MF    RK +     ++  +K  P+++E   GK+   A+ +  GG E +F+++F     E
Sbjct: 96  MFHTWSRKAETVARNLWHNLKTGPSMSETAWGKVNLTAKAITKGGFESLFRQIFGTEPNE 155

Query: 79  KLLSCSRCYLSTTAGPVAGLLFISTHVVAFCSDRPIVISSSEGELGRLNYKVMIPLKKMK 138
            L     CYLSTT GPVAG +++S   VAFCSDRP+  ++  G+     Y+V++PL  + 
Sbjct: 156 TLKKTFACYLSTTTGPVAGTVYLSNARVAFCSDRPLYFTAPSGQESWSYYRVVVPLANVA 215

Query: 139 RVNQIEHINNPSKKYIQVVTVDDFDFWFMGFLNYEKAFKFLQKKVS 185
            VN +     P +KYIQ+ TVD  DFWFMGF+NYEKA   L   VS
Sbjct: 216 TVNPVVVKETPPEKYIQLTTVDGHDFWFMGFVNYEKATHHLLTSVS 261

BLAST of Cp4.1LG01g10160 vs. NCBI nr
Match: XP_023548915.1 (GEM-like protein 4 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 375 bits (963), Expect = 3.62e-131
Identity = 186/186 (100.00%), Postives = 186/186 (100.00%), Query Frame = 0

Query: 1   MKISLCPVKKLDNSSSNSMFRHLRRKVDRFVNGVFERVKLSPNITENLKGKLWSGARLVQ 60
           MKISLCPVKKLDNSSSNSMFRHLRRKVDRFVNGVFERVKLSPNITENLKGKLWSGARLVQ
Sbjct: 1   MKISLCPVKKLDNSSSNSMFRHLRRKVDRFVNGVFERVKLSPNITENLKGKLWSGARLVQ 60

Query: 61  FGGNEKIFQKMFNLSQGEKLLSCSRCYLSTTAGPVAGLLFISTHVVAFCSDRPIVISSSE 120
           FGGNEKIFQKMFNLSQGEKLLSCSRCYLSTTAGPVAGLLFISTHVVAFCSDRPIVISSSE
Sbjct: 61  FGGNEKIFQKMFNLSQGEKLLSCSRCYLSTTAGPVAGLLFISTHVVAFCSDRPIVISSSE 120

Query: 121 GELGRLNYKVMIPLKKMKRVNQIEHINNPSKKYIQVVTVDDFDFWFMGFLNYEKAFKFLQ 180
           GELGRLNYKVMIPLKKMKRVNQIEHINNPSKKYIQVVTVDDFDFWFMGFLNYEKAFKFLQ
Sbjct: 121 GELGRLNYKVMIPLKKMKRVNQIEHINNPSKKYIQVVTVDDFDFWFMGFLNYEKAFKFLQ 180

Query: 181 KKVSRD 186
           KKVSRD
Sbjct: 181 KKVSRD 186

BLAST of Cp4.1LG01g10160 vs. NCBI nr
Match: KAG6601067.1 (GEM-like protein 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 334 bits (856), Expect = 3.97e-115
Identity = 164/168 (97.62%), Postives = 165/168 (98.21%), Query Frame = 0

Query: 19  MFRHLRRKVDRFVNGVFERVKLSPNITENLKGKLWSGARLVQFGGNEKIFQKMFNLSQGE 78
           MFRHL RK+DRFVNGVFERVKLSPNITENLKGKLWSGARLVQFGGNEKIFQKMFNL QGE
Sbjct: 1   MFRHLGRKIDRFVNGVFERVKLSPNITENLKGKLWSGARLVQFGGNEKIFQKMFNLRQGE 60

Query: 79  KLLSCSRCYLSTTAGPVAGLLFISTHVVAFCSDRPIVISSSEGELGRLNYKVMIPLKKMK 138
           KL SCSRCYLSTTAGPVAGLLFISTHVVAFCSDRPIVISSSEGELGRLNYKVMIPLKKMK
Sbjct: 61  KLQSCSRCYLSTTAGPVAGLLFISTHVVAFCSDRPIVISSSEGELGRLNYKVMIPLKKMK 120

Query: 139 RVNQIEHINNPSKKYIQVVTVDDFDFWFMGFLNYEKAFKFLQKKVSRD 186
           RVNQIEHINNPSKKYIQVVTVDDFDFWFMGFLNYEKAFKFLQKKVSRD
Sbjct: 121 RVNQIEHINNPSKKYIQVVTVDDFDFWFMGFLNYEKAFKFLQKKVSRD 168

BLAST of Cp4.1LG01g10160 vs. NCBI nr
Match: XP_022990162.1 (GEM-like protein 4 [Cucurbita maxima])

HSP 1 Score: 289 bits (740), Expect = 2.99e-97
Identity = 148/175 (84.57%), Postives = 149/175 (85.14%), Query Frame = 0

Query: 38  VKLSPNITENLKGKLWSGARLVQFGGNEKIFQKMFNLSQGEKLLSCSRCYLSTTAGPVAG 97
           VKLSPNITENLKGKLWSGARLVQFGGNEKIFQKMFNLSQGEKLLSCSRCYLSTTAGPVAG
Sbjct: 7   VKLSPNITENLKGKLWSGARLVQFGGNEKIFQKMFNLSQGEKLLSCSRCYLSTTAGPVAG 66

Query: 98  LLFISTHVVAFCSDRPIVISSSEGELGRLNYKV--------------------------M 157
           LLFISTHVVAFCSDRPIV+SSSEGELGRLNYKV                          M
Sbjct: 67  LLFISTHVVAFCSDRPIVVSSSEGELGRLNYKVTLYILQHSQTPVVANKFFVLCLIHQVM 126

Query: 158 IPLKKMKRVNQIEHINNPSKKYIQVVTVDDFDFWFMGFLNYEKAFKFLQKKVSRD 186
           IPLKKMKRVNQIEHINNPSKKYIQVVTVDDFDFWFMGFLNYEKAFKFLQKKVSRD
Sbjct: 127 IPLKKMKRVNQIEHINNPSKKYIQVVTVDDFDFWFMGFLNYEKAFKFLQKKVSRD 181

BLAST of Cp4.1LG01g10160 vs. NCBI nr
Match: XP_022139162.1 (putative GEM-like protein 8 [Momordica charantia])

HSP 1 Score: 269 bits (688), Expect = 1.77e-89
Identity = 129/169 (76.33%), Postives = 146/169 (86.39%), Query Frame = 0

Query: 18  SMFRHLRRKVDRFVNGVFERVKLSPNITENLKGKLWSGARLVQFGGNEKIFQKMFNLSQG 77
           +M R L RK D FVNG+ + VKLSPN+ E +KGKLW  A+LVQFGG+ KIFQK+FNL QG
Sbjct: 3   AMIRKLGRKADSFVNGILDHVKLSPNVAETVKGKLWLVAKLVQFGGSGKIFQKLFNLRQG 62

Query: 78  EKLLSCSRCYLSTTAGPVAGLLFISTHVVAFCSDRPIVISSSEGELGRLNYKVMIPLKKM 137
           +KLLS S CYLSTTAGP+AGLLFIST+ VAFCSDRPI+I+S  GELGR NYKVMIP+KKM
Sbjct: 63  DKLLSSSHCYLSTTAGPIAGLLFISTNAVAFCSDRPIIITSPHGELGRFNYKVMIPVKKM 122

Query: 138 KRVNQIEHINNPSKKYIQVVTVDDFDFWFMGFLNYEKAFKFLQKKVSRD 186
           KRVNQ E+++NPSKKYIQVVTVDDFDFWFMGFLNY KAFKFLQK VS D
Sbjct: 123 KRVNQTENVSNPSKKYIQVVTVDDFDFWFMGFLNYGKAFKFLQKGVSED 171

BLAST of Cp4.1LG01g10160 vs. NCBI nr
Match: XP_008445893.1 (PREDICTED: GEM-like protein 4 [Cucumis melo])

HSP 1 Score: 257 bits (657), Expect = 8.40e-85
Identity = 122/168 (72.62%), Postives = 142/168 (84.52%), Query Frame = 0

Query: 19  MFRHLRRKVDRFVNGVFERVKLSPNITENLKGKLWSGARLVQFGGNEKIFQKMFNLSQGE 78
           M R L RK   FVNG+ E VKLSPNI + +KGKLW G +LVQFGG+EKIF KMFNL QG+
Sbjct: 1   MIRELGRKGYSFVNGILEHVKLSPNIAKTVKGKLWLGTKLVQFGGSEKIFHKMFNLEQGD 60

Query: 79  KLLSCSRCYLSTTAGPVAGLLFISTHVVAFCSDRPIVISSSEGELGRLNYKVMIPLKKMK 138
           KLL+ + CYLSTTAGP+AGL+F+STHVVAFCSDRPI+ISS  GE+G++ YKVMIP+ K+K
Sbjct: 61  KLLNSAHCYLSTTAGPIAGLVFVSTHVVAFCSDRPIIISSPHGEVGKVFYKVMIPVNKVK 120

Query: 139 RVNQIEHINNPSKKYIQVVTVDDFDFWFMGFLNYEKAFKFLQKKVSRD 186
           RVNQ  + NNP+KKYIQVVTVDDFDFWFMGFLNYEK FKF+QK VS D
Sbjct: 121 RVNQRNNENNPAKKYIQVVTVDDFDFWFMGFLNYEKTFKFIQKGVSMD 168

BLAST of Cp4.1LG01g10160 vs. ExPASy TrEMBL
Match: A0A6J1JHW6 (GEM-like protein 4 OS=Cucurbita maxima OX=3661 GN=LOC111487132 PE=3 SV=1)

HSP 1 Score: 289 bits (740), Expect = 1.45e-97
Identity = 148/175 (84.57%), Postives = 149/175 (85.14%), Query Frame = 0

Query: 38  VKLSPNITENLKGKLWSGARLVQFGGNEKIFQKMFNLSQGEKLLSCSRCYLSTTAGPVAG 97
           VKLSPNITENLKGKLWSGARLVQFGGNEKIFQKMFNLSQGEKLLSCSRCYLSTTAGPVAG
Sbjct: 7   VKLSPNITENLKGKLWSGARLVQFGGNEKIFQKMFNLSQGEKLLSCSRCYLSTTAGPVAG 66

Query: 98  LLFISTHVVAFCSDRPIVISSSEGELGRLNYKV--------------------------M 157
           LLFISTHVVAFCSDRPIV+SSSEGELGRLNYKV                          M
Sbjct: 67  LLFISTHVVAFCSDRPIVVSSSEGELGRLNYKVTLYILQHSQTPVVANKFFVLCLIHQVM 126

Query: 158 IPLKKMKRVNQIEHINNPSKKYIQVVTVDDFDFWFMGFLNYEKAFKFLQKKVSRD 186
           IPLKKMKRVNQIEHINNPSKKYIQVVTVDDFDFWFMGFLNYEKAFKFLQKKVSRD
Sbjct: 127 IPLKKMKRVNQIEHINNPSKKYIQVVTVDDFDFWFMGFLNYEKAFKFLQKKVSRD 181

BLAST of Cp4.1LG01g10160 vs. ExPASy TrEMBL
Match: A0A6J1CD83 (putative GEM-like protein 8 OS=Momordica charantia OX=3673 GN=LOC111010135 PE=3 SV=1)

HSP 1 Score: 269 bits (688), Expect = 8.56e-90
Identity = 129/169 (76.33%), Postives = 146/169 (86.39%), Query Frame = 0

Query: 18  SMFRHLRRKVDRFVNGVFERVKLSPNITENLKGKLWSGARLVQFGGNEKIFQKMFNLSQG 77
           +M R L RK D FVNG+ + VKLSPN+ E +KGKLW  A+LVQFGG+ KIFQK+FNL QG
Sbjct: 3   AMIRKLGRKADSFVNGILDHVKLSPNVAETVKGKLWLVAKLVQFGGSGKIFQKLFNLRQG 62

Query: 78  EKLLSCSRCYLSTTAGPVAGLLFISTHVVAFCSDRPIVISSSEGELGRLNYKVMIPLKKM 137
           +KLLS S CYLSTTAGP+AGLLFIST+ VAFCSDRPI+I+S  GELGR NYKVMIP+KKM
Sbjct: 63  DKLLSSSHCYLSTTAGPIAGLLFISTNAVAFCSDRPIIITSPHGELGRFNYKVMIPVKKM 122

Query: 138 KRVNQIEHINNPSKKYIQVVTVDDFDFWFMGFLNYEKAFKFLQKKVSRD 186
           KRVNQ E+++NPSKKYIQVVTVDDFDFWFMGFLNY KAFKFLQK VS D
Sbjct: 123 KRVNQTENVSNPSKKYIQVVTVDDFDFWFMGFLNYGKAFKFLQKGVSED 171

BLAST of Cp4.1LG01g10160 vs. ExPASy TrEMBL
Match: A0A1S3BDR8 (GEM-like protein 4 OS=Cucumis melo OX=3656 GN=LOC103488777 PE=3 SV=1)

HSP 1 Score: 257 bits (657), Expect = 4.07e-85
Identity = 122/168 (72.62%), Postives = 142/168 (84.52%), Query Frame = 0

Query: 19  MFRHLRRKVDRFVNGVFERVKLSPNITENLKGKLWSGARLVQFGGNEKIFQKMFNLSQGE 78
           M R L RK   FVNG+ E VKLSPNI + +KGKLW G +LVQFGG+EKIF KMFNL QG+
Sbjct: 1   MIRELGRKGYSFVNGILEHVKLSPNIAKTVKGKLWLGTKLVQFGGSEKIFHKMFNLEQGD 60

Query: 79  KLLSCSRCYLSTTAGPVAGLLFISTHVVAFCSDRPIVISSSEGELGRLNYKVMIPLKKMK 138
           KLL+ + CYLSTTAGP+AGL+F+STHVVAFCSDRPI+ISS  GE+G++ YKVMIP+ K+K
Sbjct: 61  KLLNSAHCYLSTTAGPIAGLVFVSTHVVAFCSDRPIIISSPHGEVGKVFYKVMIPVNKVK 120

Query: 139 RVNQIEHINNPSKKYIQVVTVDDFDFWFMGFLNYEKAFKFLQKKVSRD 186
           RVNQ  + NNP+KKYIQVVTVDDFDFWFMGFLNYEK FKF+QK VS D
Sbjct: 121 RVNQRNNENNPAKKYIQVVTVDDFDFWFMGFLNYEKTFKFIQKGVSMD 168

BLAST of Cp4.1LG01g10160 vs. ExPASy TrEMBL
Match: A0A0A0KPM0 (GRAM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G577990 PE=3 SV=1)

HSP 1 Score: 251 bits (642), Expect = 1.54e-82
Identity = 117/168 (69.64%), Postives = 141/168 (83.93%), Query Frame = 0

Query: 19  MFRHLRRKVDRFVNGVFERVKLSPNITENLKGKLWSGARLVQFGGNEKIFQKMFNLSQGE 78
           M R L R+   FVNG+ E VKLSPNI + +KGKLW G +L+QFGG+E IF KMFNL  G+
Sbjct: 1   MIRELGRRGYSFVNGILEHVKLSPNIAKTVKGKLWLGTKLLQFGGSENIFHKMFNLEHGD 60

Query: 79  KLLSCSRCYLSTTAGPVAGLLFISTHVVAFCSDRPIVISSSEGELGRLNYKVMIPLKKMK 138
           KLL+ + CYLSTTAGP+AGL+F+STHVVAFCSDRPI+ISS  GE+G++ YKVMIP+ K+K
Sbjct: 61  KLLNSAHCYLSTTAGPIAGLIFVSTHVVAFCSDRPIIISSPHGEIGKIFYKVMIPVNKVK 120

Query: 139 RVNQIEHINNPSKKYIQVVTVDDFDFWFMGFLNYEKAFKFLQKKVSRD 186
           RVNQ  ++NNP+KKYIQVVTVDDFDFWFMGFLN+EKAFKF+Q  VS D
Sbjct: 121 RVNQRNNVNNPAKKYIQVVTVDDFDFWFMGFLNHEKAFKFIQNGVSVD 168

BLAST of Cp4.1LG01g10160 vs. ExPASy TrEMBL
Match: A0A6J1HVV6 (putative GEM-like protein 8 OS=Cucurbita maxima OX=3661 GN=LOC111466633 PE=3 SV=1)

HSP 1 Score: 248 bits (632), Expect = 2.60e-81
Identity = 118/168 (70.24%), Postives = 141/168 (83.93%), Query Frame = 0

Query: 19  MFRHLRRKVDRFVNGVFERVKLSPNITENLKGKLWSGARLVQFGGNEKIFQKMFNLSQGE 78
           M R++  K  RFVNGVF+ VKLSP++T+ +K KLW GA+LVQ G +EKIF+KMF L Q +
Sbjct: 1   MIRNIGSKAARFVNGVFQHVKLSPSVTKTVKRKLWLGAKLVQIGRSEKIFKKMFKLRQDD 60

Query: 79  KLLSCSRCYLSTTAGPVAGLLFISTHVVAFCSDRPIVISSSEGELGRLNYKVMIPLKKMK 138
           KLLS S CYLSTTAGP+AGLLF+STHVVAFCSDRPI+ SS   E  R+NYKVMIP+KKMK
Sbjct: 61  KLLSSSHCYLSTTAGPIAGLLFVSTHVVAFCSDRPIIFSSPHEEQSRMNYKVMIPMKKMK 120

Query: 139 RVNQIEHINNPSKKYIQVVTVDDFDFWFMGFLNYEKAFKFLQKKVSRD 186
           RVN+ E++NNPSKKYIQVVTVD F+FWFMGFLNY+ AFKFL K +S+D
Sbjct: 121 RVNESENVNNPSKKYIQVVTVDGFEFWFMGFLNYKIAFKFLPKGLSKD 168

BLAST of Cp4.1LG01g10160 vs. TAIR 10
Match: AT5G08350.1 (GRAM domain-containing protein / ABA-responsive protein-related )

HSP 1 Score: 195.3 bits (495), Expect = 4.4e-50
Identity = 95/176 (53.98%), Postives = 133/176 (75.57%), Query Frame = 0

Query: 9   KKLDNSSSNSMFRHLRRKVDRFVNGVFERVKLSPNITENLKGKLWSGARLVQFGGNEKIF 68
           KK + S+  S+ +  R+K D F NGV ++ K+ P +TE +K KL  GAR++Q GG EKIF
Sbjct: 40  KKSEQSNVKSILK--RKKTDGFTNGVRDQSKIRPKLTETVKRKLSLGARILQVGGLEKIF 99

Query: 69  QKMFNLSQGEKLLSCSRCYLSTTAGPVAGLLFISTHVVAFCSDRPIVISSSEGELGRLNY 128
           +++F +S+GEKL    +CYLSTTAGP+AGLLFIS+  +AFCS+R I + S +G++ R++Y
Sbjct: 100 KRLFRVSEGEKLFKMYQCYLSTTAGPIAGLLFISSKKMAFCSERSIKVDSPQGDIIRVHY 159

Query: 129 KVMIPLKKMKRVNQIEHINNPSKKYIQVVTVDDFDFWFMGFLNYEKAFKFLQKKVS 185
           KV IPL K+ RVNQ ++   PS+KY++VVTVD FDFWFMGFL+Y+KAF  L+K +S
Sbjct: 160 KVSIPLCKIDRVNQSQNTKKPSQKYLEVVTVDGFDFWFMGFLSYQKAFNCLEKALS 213

BLAST of Cp4.1LG01g10160 vs. TAIR 10
Match: AT5G23370.1 (GRAM domain-containing protein / ABA-responsive protein-related )

HSP 1 Score: 188.7 bits (478), Expect = 4.1e-48
Identity = 92/167 (55.09%), Postives = 126/167 (75.45%), Query Frame = 0

Query: 18  SMFRHLRRKVDRFVNGVFERVKLSPNITENLKGKLWSGARLVQFGGNEKIFQKMFNLSQG 77
           SM R  ++K D F NGV ++ KL P +TE +K KL  GAR++Q GG EKI++++F +S  
Sbjct: 50  SMLR--KKKNDSFTNGVRDQDKLGPKLTETVKRKLSLGARILQMGGLEKIYKRLFKVSDE 109

Query: 78  EKLLSCSRCYLSTTAGPVAGLLFISTHVVAFCSDRPIVISSSEGELGRLNYKVMIPLKKM 137
           EKL    +CYLSTTAGP+AGLLFIS+  +AFCS+R I ++S +GEL R++YKV IPL K+
Sbjct: 110 EKLFKAYQCYLSTTAGPIAGLLFISSKKIAFCSERSIKVASPQGELNRVHYKVSIPLCKI 169

Query: 138 KRVNQIEHINNPSKKYIQVVTVDDFDFWFMGFLNYEKAFKFLQKKVS 185
             VNQ ++   PS+KY++VVTVD FDFWFMGFL+Y+KAF  L++ +S
Sbjct: 170 NGVNQSQNTTKPSQKYLEVVTVDGFDFWFMGFLSYQKAFNCLEQALS 214

BLAST of Cp4.1LG01g10160 vs. TAIR 10
Match: AT5G23350.1 (GRAM domain-containing protein / ABA-responsive protein-related )

HSP 1 Score: 184.1 bits (466), Expect = 1.0e-46
Identity = 86/169 (50.89%), Postives = 125/169 (73.96%), Query Frame = 0

Query: 18  SMFRHLRRKVDRFVNGVFERVKLSPNITENLKGKLWSGARLVQFGGNEKIFQKMFNLSQG 77
           SM R  ++K D F NG  ++ KL P +TE +K KL  GA+++Q GG EKI++++F +   
Sbjct: 112 SMLR--KKKTDSFTNGARDQDKLGPKLTETVKRKLSLGAKILQMGGLEKIYKRLFKVCDQ 171

Query: 78  EKLLSCSRCYLSTTAGPVAGLLFISTHVVAFCSDRPIVISSSEGELGRLNYKVMIPLKKM 137
           EKL    +CYLSTTAGP+AGLLFIS+  +AFCS+R I ++S +G L R++YKV IPL K+
Sbjct: 172 EKLFKAYQCYLSTTAGPIAGLLFISSKKIAFCSERSIKVASPQGVLSRVHYKVSIPLCKI 231

Query: 138 KRVNQIEHINNPSKKYIQVVTVDDFDFWFMGFLNYEKAFKFLQKKVSRD 187
             VNQ ++   PS+KY+++VT+D+FDFWFMGF++Y+KAF  L+K ++ D
Sbjct: 232 NGVNQSQNTKKPSQKYLEIVTIDNFDFWFMGFVSYQKAFNCLEKALNND 278

BLAST of Cp4.1LG01g10160 vs. TAIR 10
Match: AT5G23360.1 (GRAM domain-containing protein / ABA-responsive protein-related )

HSP 1 Score: 180.6 bits (457), Expect = 1.1e-45
Identity = 84/179 (46.93%), Postives = 128/179 (71.51%), Query Frame = 0

Query: 8   VKKLDNSSSNSMFRHLRRKVDRFVNGVFERVKLSPNITENLKGKLWSGARLVQFGGNEKI 67
           + KL   +S+ +    ++K D F NG  ++ KL P +TE +K KL  GA+++Q GG EKI
Sbjct: 30  INKLQIPTSSKVSMLQKKKTDSFTNGARDQDKLGPKLTETVKRKLSLGAKILQMGGLEKI 89

Query: 68  FQKMFNLSQGEKLLSCSRCYLSTTAGPVAGLLFISTHVVAFCSDRPIVISSSEGELGRLN 127
           ++++F +   EKL    +CYLSTT G +AGLLFIS+  +AFCS+R I ++S +G+L R++
Sbjct: 90  YKRLFKVCDKEKLFKAYQCYLSTTEGSIAGLLFISSKKIAFCSERSIKVTSPQGDLTRVH 149

Query: 128 YKVMIPLKKMKRVNQIEHINNPSKKYIQVVTVDDFDFWFMGFLNYEKAFKFLQKKVSRD 187
           YKV IPL K+  VNQ ++   PS++Y++VVTVD++DFWFMGF++Y+KAF  L+K ++ D
Sbjct: 150 YKVSIPLCKINGVNQSQNTKKPSQRYLEVVTVDNYDFWFMGFVSYQKAFNCLEKALNED 208

BLAST of Cp4.1LG01g10160 vs. TAIR 10
Match: AT5G13200.1 (GRAM domain family protein )

HSP 1 Score: 133.3 bits (334), Expect = 2.1e-31
Identity = 67/166 (40.36%), Postives = 96/166 (57.83%), Query Frame = 0

Query: 19  MFRHLRRKVDRFVNGVFERVKLSPNITENLKGKLWSGARLVQFGGNEKIFQKMFNLSQGE 78
           MF    RK +     ++  +K  P+++E   GK+   A+ +  GG E +F+++F     E
Sbjct: 96  MFHTWSRKAETVARNLWHNLKTGPSMSETAWGKVNLTAKAITKGGFESLFRQIFGTEPNE 155

Query: 79  KLLSCSRCYLSTTAGPVAGLLFISTHVVAFCSDRPIVISSSEGELGRLNYKVMIPLKKMK 138
            L     CYLSTT GPVAG +++S   VAFCSDRP+  ++  G+     Y+V++PL  + 
Sbjct: 156 TLKKTFACYLSTTTGPVAGTVYLSNARVAFCSDRPLYFTAPSGQESWSYYRVVVPLANVA 215

Query: 139 RVNQIEHINNPSKKYIQVVTVDDFDFWFMGFLNYEKAFKFLQKKVS 185
            VN +     P +KYIQ+ TVD  DFWFMGF+NYEKA   L   VS
Sbjct: 216 TVNPVVVKETPPEKYIQLTTVDGHDFWFMGFVNYEKATHHLLTSVS 261

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9FTA06.2e-4953.98GEM-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=At5g08350 PE=2 SV=1[more]
Q9FMW45.8e-4755.09Putative GEM-like protein 8 OS=Arabidopsis thaliana OX=3702 GN=At5g23370 PE=3 SV... [more]
Q9FMW61.4e-4550.89GEM-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=At5g23350 PE=2 SV=2[more]
Q9FMW51.6e-4446.93GEM-like protein 7 OS=Arabidopsis thaliana OX=3702 GN=At5g23360 PE=2 SV=1[more]
Q9LYV62.9e-3040.36GEM-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=At5g13200 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
XP_023548915.13.62e-131100.00GEM-like protein 4 [Cucurbita pepo subsp. pepo][more]
KAG6601067.13.97e-11597.62GEM-like protein 4, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_022990162.12.99e-9784.57GEM-like protein 4 [Cucurbita maxima][more]
XP_022139162.11.77e-8976.33putative GEM-like protein 8 [Momordica charantia][more]
XP_008445893.18.40e-8572.62PREDICTED: GEM-like protein 4 [Cucumis melo][more]
Match NameE-valueIdentityDescription
A0A6J1JHW61.45e-9784.57GEM-like protein 4 OS=Cucurbita maxima OX=3661 GN=LOC111487132 PE=3 SV=1[more]
A0A6J1CD838.56e-9076.33putative GEM-like protein 8 OS=Momordica charantia OX=3673 GN=LOC111010135 PE=3 ... [more]
A0A1S3BDR84.07e-8572.62GEM-like protein 4 OS=Cucumis melo OX=3656 GN=LOC103488777 PE=3 SV=1[more]
A0A0A0KPM01.54e-8269.64GRAM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G577990 PE=3 S... [more]
A0A6J1HVV62.60e-8170.24putative GEM-like protein 8 OS=Cucurbita maxima OX=3661 GN=LOC111466633 PE=3 SV=... [more]
Match NameE-valueIdentityDescription
AT5G08350.14.4e-5053.98GRAM domain-containing protein / ABA-responsive protein-related [more]
AT5G23370.14.1e-4855.09GRAM domain-containing protein / ABA-responsive protein-related [more]
AT5G23350.11.0e-4650.89GRAM domain-containing protein / ABA-responsive protein-related [more]
AT5G23360.11.1e-4546.93GRAM domain-containing protein / ABA-responsive protein-related [more]
AT5G13200.12.1e-3140.36GRAM domain family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004182GRAM domainSMARTSM00568gram2001ccoord: 66..144
e-value: 9.2E-17
score: 71.7
IPR004182GRAM domainPFAMPF02893GRAMcoord: 67..183
e-value: 5.0E-22
score: 77.9
IPR011993PH-like domain superfamilyGENE3D2.30.29.30coord: 64..185
e-value: 1.1E-20
score: 75.4
IPR037848GEM-like proteinPANTHERPTHR31969GEM-LIKE PROTEIN 2coord: 13..185
NoneNo IPR availablePANTHERPTHR31969:SF38GEM-LIKE PROTEIN 4coord: 13..185

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g10160.1Cp4.1LG01g10160.1mRNA