Cp4.1LG01g09780 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG01g09780
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	protein unc-13 homolog
Location	Cp4.1LG01: 7124191 .. 7126154 (+)
RNA-Seq Expression	Cp4.1LG01g09780
Synteny	Cp4.1LG01g09780

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGTTGTATTTCTACTGTCTCTCAAGCTTCCGATGGAATTTCTTTCAGTTTTCTTGTTTCTGAAGCTTCTACTTCTGCCAGTTCCAGAATTTGATACGAACTGAATCGAACGGAGTGTTTAATTGCAGATTGCTACTTCGATTTGCAGGATCCGGTGGCTTATGGTCAACTAGCAGTCACCGTCGGAGCAGCTCGTGCCACCGCTGGGCAGCTTGGACTGGGAGGGGGTGGACTCTGCTCAGATCACTCATTTGTGGTGAATCGAGGTATGGTTAGGGTTCCAGGACTGAACTTAATTTTACAACAGATTAAATGCACAGGAAAAGTCGTTGATCTTGAAACTATTACGTTTAACGTGCGTTTGCAAAGCTCTAATTCATGAATTCGATTTCCAGTTGGCTTTGCTATCAGAAAAATTTGTAGCTCTTAGAGATGGAACGGATTGACATAGTCTGAAATTGAGGGATTTCAGTATTAGTATCATCTAGCTTCGCTTCACCATGGACGAGTAAGTAATCTCCCGAATGTCTAATGGCTATTCTCTTAATGGAAGCTAGTGAAATAGAATGGCTATCATTTTAGTGTTATTAGTGTTGTTTGCCTGTTTGCACTTCCATTTCGGTTGTTTTGGTTTTGGATGAACCACGTAGTGTTCATTCCATATAGGGAAAACGCCATCGAGGATTTGCAACGCTGCAGGCGGGACAGACAAATACTTCTTGATTTTGTACTGGCTAGTGGCTTGATTAAGAAGGTTGTAATGCCTCCTGGGGCAGTCACACTCGATGACTTGGATCTAGACCAAATTAGTGTGGATTATGTTCTTAACTGTGCTAGAAAAGGTGATTTTCAGTGTTCATAACGATATTATTTAGTTTCGTTTATTTAAAAAATATTCTTATGTTATTATCTGTCGAAATAGGTGGAATTCTTGACCTATCTGAAGCCATAAGAGATCACCATGGCCTTACAGGGTTCCCTCAGATGGTAAGTTTGATTCACATGCAATTCTCTTGGTACGAAATAAGGTGATTTAATCGTGTCACAAAAATTTCATGGTAGATGACAAGATCCATATATTGTTTTAATCATGTCACAAAGGTTTCATGGTAGATGACAAGATCCATATATGTTGTTTAGATCTAAGAAGGCTTTATTGTATTGTTTTTTAAGTTTTAGAGAACTATTTTTAAGATTACAAGTTATATTCAGCTTAAAGACGATGAAAGTTGCCATAACTTTTTTTCAAGGCTATAAATAGTCATTTTTAATAGATGATTTTGGAGGTTAGAATGAAAGTTGCATATTATGCTGCCATACGTGTTCTTTTTGCATTTCTTGTGTTTAGACTTGCATGCTAAGTCATTCAAGTAATCTTGATCAAGCTATCATGTAGACTATCATGTAGATTGATTCAAATCACTAGTTTAAAAATTAGTTTTCTTTACTCTTGATCTTGATCATCAAGATAATCTGTTCCAAAATTTTTCCTCGGGTTGATTTCTTGTCGTTTTTTGGGTTGGTATGAATCCTTGTCGTTTTTGGGGTTGGATTGATTCCTTATTATTTTTGGGGTTGTTGAATAATTTAAATGTAAAGATCTCGTTCTTGAACAAGATTTTTAGATCAAATTCTAGGATGAGTGTTAATAAACTATTGCTAATTTATAAGTTATCTTGACATCCAGAATAATTCAGGTTCTGGGGATGAATTTTTTGTTACGGATTTAGATTCTTCAGGGCCACCTCCAAAAAGGGCACCACCACCTGTTTCTGCTTCCACACCTCCTCCTGTCTATACAGCTCCCGCAGTAGTTGCACCAACACCTATCCCCACACCGTCGCTAACCAAAACGAATGTATCTAGATCAGGGTCTTTGGAGTCCTCACAAGCTCGGGGACTGACTGGGTATGGCATTGAGGGTGCTGGGGGACGGCCTTTTGGTCGTCAGGAAGATTGA

mRNA sequence

ATGGAAGTTGATCCGGTGGCTTATGGTCAACTAGCAGTCACCGTCGGAGCAGCTCGTGCCACCGCTGGGCAGCTTGGACTGGGAGGGGGTGGACTCTGCTCAGATCACTCATTTGTGGTGAATCGAGTGTTCATTCCATATAGGGAAAACGCCATCGAGGATTTGCAACGCTGCAGGCGGGACAGACAAATACTTCTTGATTTTGTACTGGCTAGTGGCTTGATTAAGAAGGTTGTAATGCCTCCTGGGGCAGTCACACTCGATGACTTGGATCTAGACCAAATTAGTGTGGATTATGTTCTTAACTGTGCTAGAAAAGGGCCACCTCCAAAAAGGGCACCACCACCTGTTTCTGCTTCCACACCTCCTCCTGTCTATACAGCTCCCGCAGTAGTTGCACCAACACCTATCCCCACACCGTCGCTAACCAAAACGAATGTATCTAGATCAGGGTCTTTGGAGTCCTCACAAGCTCGGGGACTGACTGGGTATGGCATTGAGGGTGCTGGGGGACGGCCTTTTGGTCGTCAGGAAGATTGA

Coding sequence (CDS)

ATGGAAGTTGATCCGGTGGCTTATGGTCAACTAGCAGTCACCGTCGGAGCAGCTCGTGCCACCGCTGGGCAGCTTGGACTGGGAGGGGGTGGACTCTGCTCAGATCACTCATTTGTGGTGAATCGAGTGTTCATTCCATATAGGGAAAACGCCATCGAGGATTTGCAACGCTGCAGGCGGGACAGACAAATACTTCTTGATTTTGTACTGGCTAGTGGCTTGATTAAGAAGGTTGTAATGCCTCCTGGGGCAGTCACACTCGATGACTTGGATCTAGACCAAATTAGTGTGGATTATGTTCTTAACTGTGCTAGAAAAGGGCCACCTCCAAAAAGGGCACCACCACCTGTTTCTGCTTCCACACCTCCTCCTGTCTATACAGCTCCCGCAGTAGTTGCACCAACACCTATCCCCACACCGTCGCTAACCAAAACGAATGTATCTAGATCAGGGTCTTTGGAGTCCTCACAAGCTCGGGGACTGACTGGGTATGGCATTGAGGGTGCTGGGGGACGGCCTTTTGGTCGTCAGGAAGATTGA

Protein sequence

MEVDPVAYGQLAVTVGAARATAGQLGLGGGGLCSDHSFVVNRVFIPYRENAIEDLQRCRRDRQILLDFVLASGLIKKVVMPPGAVTLDDLDLDQISVDYVLNCARKGPPPKRAPPPVSASTPPPVYTAPAVVAPTPIPTPSLTKTNVSRSGSLESSQARGLTGYGIEGAGGRPFGRQED

Homology

[Close]

BLAST of Cp4.1LG01g09780 vs. ExPASy Swiss-Prot
Match: Q8RX56 (Protein unc-13 homolog OS=Arabidopsis thaliana OX=3702 GN=PATROL1 PE=2 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 1.1e-18
Identity = 66/154 (42.86%), Postives = 82/154 (53.25%), Query Frame = 0


Query: 49  ENAIEDLQRCRRDRQILLDFVLASGLIKKVVMPPGAVTLDDLDLDQISVDYVLNCARK-- 108
           ENA+E LQR RRDR+ LLDF+LA  LIKKV+MPPGAVTLDD+DLDQ+SVDYV+NCA+K  
Sbjct: 4   ENAVEILQRYRRDRRKLLDFMLAGSLIKKVIMPPGAVTLDDVDLDQVSVDYVINCAKKGG 63

Query: 109 --------------------------------------GPPPKRAPPPVSASTPPPVYTA 163
                                                 G PPKRAPPP+         ++
Sbjct: 64  MLELAEAIRDYHDHIGLPYMNSVGTADEFFLATIPESSGSPPKRAPPPIPVLISS---SS 123

[Close]

BLAST of Cp4.1LG01g09780 vs. NCBI nr
Match: KAG7031915.1 (hypothetical protein SDJN02_05957, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 273 bits (697), Expect = 5.18e-90
Identity = 159/217 (73.27%), Postives = 163/217 (75.12%), Query Frame = 0


Query: 4   DPVAYGQLAVTVGAARATAGQLGLGGGGLCSDHSFVVNR--VFIPYRENAIEDLQRCRRD 63
           D +AYGQLAVTVGAARATAGQLGLGGGGLCSDHSF+VNR  V +P  ENAIE LQRCRRD
Sbjct: 26  DLLAYGQLAVTVGAARATAGQLGLGGGGLCSDHSFLVNRGMVRVPGLENAIEVLQRCRRD 85

Query: 64  RQILLDFVLASGLIKKVVMPPGAVTLDDLDLDQISVDYVLNCARKG-------------- 123
           RQILLDFVLASGLIKKVVMPPGAVTLDDLDLDQISVDYVLNCARKG              
Sbjct: 86  RQILLDFVLASGLIKKVVMPPGAVTLDDLDLDQISVDYVLNCARKGGMLDLSEAIRDHHG 145

Query: 124 -------------------------PPPKRAPPPVSASTPPPVYTAPAVVAPTPIPTPSL 179
                                    PPPKRAPPPVSAS PPPVYTAPAV+      TPSL
Sbjct: 146 LAGFPQMNNSGFGDGFLVTDLDSSGPPPKRAPPPVSASRPPPVYTAPAVI------TPSL 205

[Close]

BLAST of Cp4.1LG01g09780 vs. NCBI nr
Match: XP_023552519.1 (uncharacterized protein LOC111810128 [Cucurbita pepo subsp. pepo] >XP_023552599.1 uncharacterized protein LOC111810128 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 233 bits (593), Expect = 4.18e-75
Identity = 131/170 (77.06%), Postives = 131/170 (77.06%), Query Frame = 0


Query: 49  ENAIEDLQRCRRDRQILLDFVLASGLIKKVVMPPGAVTLDDLDLDQISVDYVLNCARKG- 108
           ENAIEDLQRCRRDRQILLDFVLASGLIKKVVMPPGAVTLDDLDLDQISVDYVLNCARKG 
Sbjct: 4   ENAIEDLQRCRRDRQILLDFVLASGLIKKVVMPPGAVTLDDLDLDQISVDYVLNCARKGG 63

Query: 109 --------------------------------------PPPKRAPPPVSASTPPPVYTAP 168
                                                 PPPKRAPPPVSASTPPPVYTAP
Sbjct: 64  ILDLSEAIRDHHGLTGFPQMNNSGSGDEFFVTDLDSSGPPPKRAPPPVSASTPPPVYTAP 123

Query: 169 AVVAPTPIPTPSLTKTNVSRSGSLESSQARGLTGYGIEGAGGRPFGRQED 179
           AVVAPTPIPTPSLTKTNVSRSGSLESSQARGLTGYGIEGAGGRPFGRQED
Sbjct: 124 AVVAPTPIPTPSLTKTNVSRSGSLESSQARGLTGYGIEGAGGRPFGRQED 173

[Close]

BLAST of Cp4.1LG01g09780 vs. NCBI nr
Match: XP_022985375.1 (uncharacterized protein LOC111483402 isoform X1 [Cucurbita maxima] >XP_022985384.1 uncharacterized protein LOC111483402 isoform X1 [Cucurbita maxima] >XP_022985392.1 uncharacterized protein LOC111483402 isoform X1 [Cucurbita maxima])

HSP 1 Score: 213 bits (542), Expect = 2.39e-67
Identity = 123/170 (72.35%), Postives = 125/170 (73.53%), Query Frame = 0


Query: 49  ENAIEDLQRCRRDRQILLDFVLASGLIKKVVMPPGAVTLDDLDLDQISVDYVLNCARKG- 108
           ENAIE LQRCRRDRQILLDFVLASGLIKKVVMPPGAVTLDDLDLDQISV+YVLNCARKG 
Sbjct: 4   ENAIEVLQRCRRDRQILLDFVLASGLIKKVVMPPGAVTLDDLDLDQISVNYVLNCARKGG 63

Query: 109 --------------------------------------PPPKRAPPPVSASTPPPVYTAP 168
                                                 PPPKRAPPPV AS PPPVYTAP
Sbjct: 64  MLDLSEAIRDHHGLTGFPQMNNSGSGDEFLVTDLDSSGPPPKRAPPPVYASRPPPVYTAP 123

Query: 169 AVVAPTPIPTPSLTKTNVSRSGSLESSQARGLTGYGIEGAGGRPFGRQED 179
           AV+APTPIPTPSLTKTNVSRSGSLESSQARGLTGY IEGAGGRPFG  ED
Sbjct: 124 AVIAPTPIPTPSLTKTNVSRSGSLESSQARGLTGYVIEGAGGRPFGWLED 173

[Close]

BLAST of Cp4.1LG01g09780 vs. NCBI nr
Match: XP_022957486.1 (uncharacterized protein LOC111458870 [Cucurbita moschata] >XP_022957487.1 uncharacterized protein LOC111458870 [Cucurbita moschata] >XP_022957488.1 uncharacterized protein LOC111458870 [Cucurbita moschata])

HSP 1 Score: 209 bits (533), Expect = 4.60e-66
Identity = 122/170 (71.76%), Postives = 123/170 (72.35%), Query Frame = 0


Query: 49  ENAIEDLQRCRRDRQILLDFVLASGLIKKVVMPPGAVTLDDLDLDQISVDYVLNCARKG- 108
           ENAIEDLQRCRRDRQILLDFVLASGLIKKVVMPPGAVTLDDLDLDQISVDYVLNCARKG 
Sbjct: 4   ENAIEDLQRCRRDRQILLDFVLASGLIKKVVMPPGAVTLDDLDLDQISVDYVLNCARKGG 63

Query: 109 --------------------------------------PPPKRAPPPVSASTPPPVYTAP 168
                                                 PPPKRAPPPVSAS PPPVYTAP
Sbjct: 64  MLDLSEAIRDHHGLAGFPQMNNSGSGDGFFVTDLDSSGPPPKRAPPPVSASRPPPVYTAP 123

Query: 169 AVVAPTPIPTPSLTKTNVSRSGSLESSQARGLTGYGIEGAGGRPFGRQED 179
           AV+      TPSLTKTNVSRSGSLESSQARGLTGYGIEGAGGRPFG QED
Sbjct: 124 AVI------TPSLTKTNVSRSGSLESSQARGLTGYGIEGAGGRPFGCQED 167

[Close]

BLAST of Cp4.1LG01g09780 vs. NCBI nr
Match: KAG6601117.1 (Protein unc-13-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 206 bits (524), Expect = 1.07e-64
Identity = 121/170 (71.18%), Postives = 122/170 (71.76%), Query Frame = 0


Query: 49  ENAIEDLQRCRRDRQILLDFVLASGLIKKVVMPPGAVTLDDLDLDQISVDYVLNCARKG- 108
           ENAIE LQRCRRDRQILLDFVLASGLIKKVVMPPGAVTLDDLDLDQISVDYVLNCARKG 
Sbjct: 4   ENAIEVLQRCRRDRQILLDFVLASGLIKKVVMPPGAVTLDDLDLDQISVDYVLNCARKGG 63

Query: 109 --------------------------------------PPPKRAPPPVSASTPPPVYTAP 168
                                                 PPPKRAPPPVSAS PPPVYTAP
Sbjct: 64  MLDLSEAIRDHHGLAGFPQMNNSGFGDGFLVTDLDSSGPPPKRAPPPVSASRPPPVYTAP 123

Query: 169 AVVAPTPIPTPSLTKTNVSRSGSLESSQARGLTGYGIEGAGGRPFGRQED 179
           AV+      TPSLTKTNVSRSGSLESSQARGLTGYGIEGAGGRPFG QED
Sbjct: 124 AVI------TPSLTKTNVSRSGSLESSQARGLTGYGIEGAGGRPFGCQED 167

[Close]

BLAST of Cp4.1LG01g09780 vs. ExPASy TrEMBL
Match: A0A6J1J4S2 (uncharacterized protein LOC111483402 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111483402 PE=4 SV=1)

HSP 1 Score: 213 bits (542), Expect = 1.16e-67
Identity = 123/170 (72.35%), Postives = 125/170 (73.53%), Query Frame = 0


Query: 49  ENAIEDLQRCRRDRQILLDFVLASGLIKKVVMPPGAVTLDDLDLDQISVDYVLNCARKG- 108
           ENAIE LQRCRRDRQILLDFVLASGLIKKVVMPPGAVTLDDLDLDQISV+YVLNCARKG 
Sbjct: 4   ENAIEVLQRCRRDRQILLDFVLASGLIKKVVMPPGAVTLDDLDLDQISVNYVLNCARKGG 63

Query: 109 --------------------------------------PPPKRAPPPVSASTPPPVYTAP 168
                                                 PPPKRAPPPV AS PPPVYTAP
Sbjct: 64  MLDLSEAIRDHHGLTGFPQMNNSGSGDEFLVTDLDSSGPPPKRAPPPVYASRPPPVYTAP 123

Query: 169 AVVAPTPIPTPSLTKTNVSRSGSLESSQARGLTGYGIEGAGGRPFGRQED 179
           AV+APTPIPTPSLTKTNVSRSGSLESSQARGLTGY IEGAGGRPFG  ED
Sbjct: 124 AVIAPTPIPTPSLTKTNVSRSGSLESSQARGLTGYVIEGAGGRPFGWLED 173

[Close]

BLAST of Cp4.1LG01g09780 vs. ExPASy TrEMBL
Match: A0A6J1H0C9 (uncharacterized protein LOC111458870 OS=Cucurbita moschata OX=3662 GN=LOC111458870 PE=4 SV=1)

HSP 1 Score: 209 bits (533), Expect = 2.22e-66
Identity = 122/170 (71.76%), Postives = 123/170 (72.35%), Query Frame = 0


Query: 49  ENAIEDLQRCRRDRQILLDFVLASGLIKKVVMPPGAVTLDDLDLDQISVDYVLNCARKG- 108
           ENAIEDLQRCRRDRQILLDFVLASGLIKKVVMPPGAVTLDDLDLDQISVDYVLNCARKG 
Sbjct: 4   ENAIEDLQRCRRDRQILLDFVLASGLIKKVVMPPGAVTLDDLDLDQISVDYVLNCARKGG 63

Query: 109 --------------------------------------PPPKRAPPPVSASTPPPVYTAP 168
                                                 PPPKRAPPPVSAS PPPVYTAP
Sbjct: 64  MLDLSEAIRDHHGLAGFPQMNNSGSGDGFFVTDLDSSGPPPKRAPPPVSASRPPPVYTAP 123

Query: 169 AVVAPTPIPTPSLTKTNVSRSGSLESSQARGLTGYGIEGAGGRPFGRQED 179
           AV+      TPSLTKTNVSRSGSLESSQARGLTGYGIEGAGGRPFG QED
Sbjct: 124 AVI------TPSLTKTNVSRSGSLESSQARGLTGYGIEGAGGRPFGCQED 167

[Close]

BLAST of Cp4.1LG01g09780 vs. ExPASy TrEMBL
Match: A0A6J1J4T1 (uncharacterized protein LOC111483402 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111483402 PE=4 SV=1)

HSP 1 Score: 157 bits (398), Expect = 2.93e-46
Identity = 93/139 (66.91%), Postives = 95/139 (68.35%), Query Frame = 0


Query: 80  MPPGAVTLDDLDLDQISVDYVLNCARKG-------------------------------- 139
           MPPGAVTLDDLDLDQISV+YVLNCARKG                                
Sbjct: 1   MPPGAVTLDDLDLDQISVNYVLNCARKGGMLDLSEAIRDHHGLTGFPQMNNSGSGDEFLV 60

Query: 140 -------PPPKRAPPPVSASTPPPVYTAPAVVAPTPIPTPSLTKTNVSRSGSLESSQARG 179
                  PPPKRAPPPV AS PPPVYTAPAV+APTPIPTPSLTKTNVSRSGSLESSQARG
Sbjct: 61  TDLDSSGPPPKRAPPPVYASRPPPVYTAPAVIAPTPIPTPSLTKTNVSRSGSLESSQARG 120

[Close]

BLAST of Cp4.1LG01g09780 vs. ExPASy TrEMBL
Match: A0A6J1HVX9 (uncharacterized protein LOC111466644 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111466644 PE=4 SV=1)

HSP 1 Score: 160 bits (406), Expect = 3.04e-42
Identity = 97/159 (61.01%), Postives = 103/159 (64.78%), Query Frame = 0


Query: 49  ENAIEDLQRCRRDRQILLDFVLASGLIKKVVMPPGAVTLDDLDLDQISVDYVLNCARKGP 108
           ENAIE LQR RRDRQILLDFVL+  LIKKVVMPPGAVTLDD+DLDQ+SVDYVLNCA+KG 
Sbjct: 4   ENAIELLQRYRRDRQILLDFVLSGSLIKKVVMPPGAVTLDDVDLDQVSVDYVLNCAKKGA 63

Query: 109 ----------------------------------------PPKRAPPPVSASTPPPVYTA 167
                                                   PPKRAPPPV A TPPPVYT 
Sbjct: 64  LLELSEAIRDYHDLTGFPQMNNSGSGDEFFLVTDLDSSGSPPKRAPPPVPAFTPPPVYTP 123

[Close]

BLAST of Cp4.1LG01g09780 vs. ExPASy TrEMBL
Match: A0A6J1G0P4 (uncharacterized protein LOC111449639 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111449639 PE=4 SV=1)

HSP 1 Score: 160 bits (406), Expect = 3.04e-42
Identity = 97/159 (61.01%), Postives = 103/159 (64.78%), Query Frame = 0


Query: 49  ENAIEDLQRCRRDRQILLDFVLASGLIKKVVMPPGAVTLDDLDLDQISVDYVLNCARKGP 108
           ENAIE LQR RRDRQILLDFVL+  LIKKVVMPPGAVTLDD+DLDQ+SVDYVLNCA+KG 
Sbjct: 4   ENAIELLQRYRRDRQILLDFVLSGSLIKKVVMPPGAVTLDDVDLDQVSVDYVLNCAKKGA 63

Query: 109 ----------------------------------------PPKRAPPPVSASTPPPVYTA 167
                                                   PPKRAPPPV A TPPPVYT 
Sbjct: 64  MLELSEAIRDYHDLTGFPQMNNSGSGDEFFLVTDLDSSGSPPKRAPPPVPAFTPPPVYTP 123

[Close]

BLAST of Cp4.1LG01g09780 vs. TAIR 10
Match: AT5G06970.1 (Protein of unknown function (DUF810) )

HSP 1 Score: 94.7 bits (234), Expect = 7.8e-20
Identity = 66/154 (42.86%), Postives = 82/154 (53.25%), Query Frame = 0


Query: 49  ENAIEDLQRCRRDRQILLDFVLASGLIKKVVMPPGAVTLDDLDLDQISVDYVLNCARK-- 108
           ENA+E LQR RRDR+ LLDF+LA  LIKKV+MPPGAVTLDD+DLDQ+SVDYV+NCA+K  
Sbjct: 4   ENAVEILQRYRRDRRKLLDFMLAGSLIKKVIMPPGAVTLDDVDLDQVSVDYVINCAKKGG 63

Query: 109 --------------------------------------GPPPKRAPPPVSASTPPPVYTA 163
                                                 G PPKRAPPP+         ++
Sbjct: 64  MLELAEAIRDYHDHIGLPYMNSVGTADEFFLATIPESSGSPPKRAPPPIPVLISS---SS 123

[Close]

BLAST of Cp4.1LG01g09780 vs. TAIR 10
Match: AT4G11670.1 (Protein of unknown function (DUF810) )

HSP 1 Score: 56.6 bits (135), Expect = 2.4e-08
Identity = 26/54 (48.15%), Postives = 39/54 (72.22%), Query Frame = 0


Query: 55  LQRCRRDRQILLDFVLASGLIKKVVMPPGAVT-LDDLDLDQISVDYVLNCARKG 108
           LQR R DR+ L++F+++SGL+K++  P G+ T L   DLD +S DYVL+C + G
Sbjct: 5   LQRYRNDRRKLMEFLMSSGLVKELRSPSGSPTSLSPADLDALSADYVLDCVKSG 58

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g09780 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8RX56	1.1e-18	42.86	Protein unc-13 homolog OS=Arabidopsis thaliana OX=3702 GN=PATROL1 PE=2 SV=1	[more]

BLAST of Cp4.1LG01g09780 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7031915.1	5.18e-90	73.27	hypothetical protein SDJN02_05957, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_023552519.1	4.18e-75	77.06	uncharacterized protein LOC111810128 [Cucurbita pepo subsp. pepo] >XP_023552599....	[more]
XP_022985375.1	2.39e-67	72.35	uncharacterized protein LOC111483402 isoform X1 [Cucurbita maxima] >XP_022985384...	[more]
XP_022957486.1	4.60e-66	71.76	uncharacterized protein LOC111458870 [Cucurbita moschata] >XP_022957487.1 unchar...	[more]
KAG6601117.1	1.07e-64	71.18	Protein unc-13-like protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Cp4.1LG01g09780 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J4S2	1.16e-67	72.35	uncharacterized protein LOC111483402 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1H0C9	2.22e-66	71.76	uncharacterized protein LOC111458870 OS=Cucurbita moschata OX=3662 GN=LOC1114588...	[more]
A0A6J1J4T1	2.93e-46	66.91	uncharacterized protein LOC111483402 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1HVX9	3.04e-42	61.01	uncharacterized protein LOC111466644 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1G0P4	3.04e-42	61.01	uncharacterized protein LOC111449639 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of Cp4.1LG01g09780 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G06970.1	7.8e-20	42.86	Protein of unknown function (DUF810)	[more]
AT4G11670.1	2.4e-08	48.15	Protein of unknown function (DUF810)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 138..159
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 130..179

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g09780.1	Cp4.1LG01g09780.1	mRNA