Cp4.1LG01g09150 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG01g09150
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionPentatricopeptide repeat-containing protein
LocationCp4.1LG01: 4500640 .. 4501921 (+)
RNA-Seq ExpressionCp4.1LG01g09150
SyntenyCp4.1LG01g09150
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGGTCAAACCTCCGGAACTGAATCGGCGGCACCTGAAACAGACAACGGCGAACCACTGCAGGTGAATAAAGTGCAGCCACCGGAAAATATACACTTCGTATTTTCAGGGAATTCCAAAATTCTAATGTAAGAGAAAACGGCATGCCATTGCTTCGTTTTACTTGAGCTTTCCCCATGAACACTGCAAATGCATCAATTCTCCGCTGTTCTACAAAGCTTTCGGCACGTTCTGAAAACATGTATTGCCCAGAGAGACCTCCGTACTGGAAAGTTCCTCCATGCTCTCTATATCAAGTCCTTCGTCCCCGCATCCACATATATCTCCAACCACTTCATTCTTCTTTACTCCAAATGTCGCCGCCTCTCCGCTGCTCGTCGGGTCTTCGATCAGACCCAGGAATGCAATATCTTTTCCTTCAACGCCCTGATTGCTGCATATGCGAAAGAATCGTTTGTCGAAGTTGCACGCGAACTGTTTGATAAAATGTCCCAACCAGACCCTATTTCGTATAACACTTTAATTGCTGCATATGCTCAACGTGGGGATGTTCAGTCTGCTTTTCAGTTGTTTGTGGAGATGAGAGAGGCCTTACTTGACATGGATGGGTTTACCCTTTCTGGTATAATTACTGCTTGTGGCGATGATGTTGCTTTGATTAGGCAGTTGCACGCACTGAGTGTTGCGGCTGGGTTCGATTGTTATGCGTCTGTTGGTAATGCACTCATTACATATTACAGCAAAAATGGGTTTTTGAATGAGGCCCAACGGATTTTTTATGGCATGGGTGAGGATAAAGATGAAGTCTCATGGAATTCGATGGTTGTGGCATATATGCAGCATCGAGAGGGGTCTAAGGCTCTTGGATTGTACATGGAAATGACTCTGAGGGGCTTGGTTGTTGACATGTTTACTTTAGCAAGCGTCTTGACGGCATTTACTAATGTGCAGGACTTATCAGGCGGGCTTCAGTTTCATGCCAAATTGATAAAGTCTGGCTACCATCAGAATTGTCATGTGGGTAGTGGTCTGATTGATTTGTATTCAAAATGTGGTGGTTCTATGCTGAGTTGTAGAAAAGTTTTTGATGAAATCTGCAAGCCAGATTTGGTTCTTTGGAATACAATGATTTCAGGATACTCTCTGTTTGAGGAGTTTTCTGATGAAGCTCTTGAATGTTTCCGGAGGTTGCAAGGTGTTGGCCACCTCCCTGACGATTGCAGCCTTGTTTGCGTAATCAGTGCCTGTGCGAATATGTCATCGCCCTCTCAAGGAAGACAA

mRNA sequence

ATGCGCTTTCGGCACGTTCTGAAAACATGTATTGCCCAGAGAGACCTCCGTACTGGAAAGTTCCTCCATGCTCTCTATATCAAGTCCTTCGTCCCCGCATCCACATATATCTCCAACCACTTCATTCTTCTTTACTCCAAATGTCGCCGCCTCTCCGCTGCTCGTCGGGTCTTCGATCAGACCCAGGAATGCAATATCTTTTCCTTCAACGCCCTGATTGCTGCATATGCGAAAGAATCGTTTGTCGAAGTTGCACGCGAACTGTTTGATAAAATGTCCCAACCAGACCCTATTTCGTATAACACTTTAATTGCTGCATATGCTCAACGTGGGGATGTTCAGTCTGCTTTTCAGTTGTTTGTGGAGATGAGAGAGGCCTTACTTGACATGGATGGGTTTACCCTTTCTGGTATAATTACTGCTTGTGGCGATGATGTTGCTTTGATTAGGCAGTTGCACGCACTGAGTGTTGCGGCTGGGTTCGATTGTTATGCGTCTGTTGGTAATGCACTCATTACATATTACAGCAAAAATGGGTTTTTGAATGAGGCCCAACGGATTTTTTATGGCATGGGTGAGGATAAAGATGAAGTCTCATGGAATTCGATGGTTGTGGCATATATGCAGCATCGAGAGGGGTCTAAGGCTCTTGGATTGTACATGGAAATGACTCTGAGGGGCTTGGTTGTTGACATCCTTGTTTGCGTAATCAGTGCCTGTGCGAATATGTCATCGCCCTCTCAAGGAAGACAA

Coding sequence (CDS)

ATGCGCTTTCGGCACGTTCTGAAAACATGTATTGCCCAGAGAGACCTCCGTACTGGAAAGTTCCTCCATGCTCTCTATATCAAGTCCTTCGTCCCCGCATCCACATATATCTCCAACCACTTCATTCTTCTTTACTCCAAATGTCGCCGCCTCTCCGCTGCTCGTCGGGTCTTCGATCAGACCCAGGAATGCAATATCTTTTCCTTCAACGCCCTGATTGCTGCATATGCGAAAGAATCGTTTGTCGAAGTTGCACGCGAACTGTTTGATAAAATGTCCCAACCAGACCCTATTTCGTATAACACTTTAATTGCTGCATATGCTCAACGTGGGGATGTTCAGTCTGCTTTTCAGTTGTTTGTGGAGATGAGAGAGGCCTTACTTGACATGGATGGGTTTACCCTTTCTGGTATAATTACTGCTTGTGGCGATGATGTTGCTTTGATTAGGCAGTTGCACGCACTGAGTGTTGCGGCTGGGTTCGATTGTTATGCGTCTGTTGGTAATGCACTCATTACATATTACAGCAAAAATGGGTTTTTGAATGAGGCCCAACGGATTTTTTATGGCATGGGTGAGGATAAAGATGAAGTCTCATGGAATTCGATGGTTGTGGCATATATGCAGCATCGAGAGGGGTCTAAGGCTCTTGGATTGTACATGGAAATGACTCTGAGGGGCTTGGTTGTTGACATCCTTGTTTGCGTAATCAGTGCCTGTGCGAATATGTCATCGCCCTCTCAAGGAAGACAA

Protein sequence

MRFRHVLKTCIAQRDLRTGKFLHALYIKSFVPASTYISNHFILLYSKCRRLSAARRVFDQTQECNIFSFNALIAAYAKESFVEVARELFDKMSQPDPISYNTLIAAYAQRGDVQSAFQLFVEMREALLDMDGFTLSGIITACGDDVALIRQLHALSVAAGFDCYASVGNALITYYSKNGFLNEAQRIFYGMGEDKDEVSWNSMVVAYMQHREGSKALGLYMEMTLRGLVVDILVCVISACANMSSPSQGRQ
Homology
BLAST of Cp4.1LG01g09150 vs. ExPASy Swiss-Prot
Match: Q9M2Y7 (Pentatricopeptide repeat-containing protein At3g49710 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H79 PE=2 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 3.4e-74
Identity = 139/251 (55.38%), Postives = 181/251 (72.11%), Query Frame = 0

Query: 3   FRHVLKTCIAQRDLRTGKFLHALYIKSFVPASTYISNHFILLYSKCRRLSAARRVFDQTQ 62
           FR +L   +A+RDL TGK LHALY+KS V +STY+SNHF+ LYSKC RLS AR  F  T+
Sbjct: 11  FRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTE 70

Query: 63  ECNIFSFNALIAAYAKESFVEVARELFDKMSQPDPISYNTLIAAYAQRGDVQSAFQLFVE 122
           E N+FS+N ++ AYAK+S + +AR+LFD++ QPD +SYNTLI+ YA   +  +A  LF  
Sbjct: 71  EPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKR 130

Query: 123 MREALLDMDGFTLSGIITACGDDVALIRQLHALSVAAGFDCYASVGNALITYYSKNGFLN 182
           MR+   ++DGFTLSG+I AC D V LI+QLH  SV+ GFD Y+SV NA +TYYSK G L 
Sbjct: 131 MRKLGFEVDGFTLSGLIAACCDRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLR 190

Query: 183 EAQRIFYGMGEDKDEVSWNSMVVAYMQHREGSKALGLYMEMTLRGLVVDI--LVCVISAC 242
           EA  +FYGM E +DEVSWNSM+VAY QH+EG+KAL LY EM  +G  +D+  L  V++A 
Sbjct: 191 EAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNAL 250

Query: 243 ANMSSPSQGRQ 252
            ++     GRQ
Sbjct: 251 TSLDHLIGGRQ 261

BLAST of Cp4.1LG01g09150 vs. ExPASy Swiss-Prot
Match: Q9LRV2 (Pentatricopeptide repeat-containing protein At3g26540 OS=Arabidopsis thaliana OX=3702 GN=PCMP-A5 PE=2 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 5.1e-30
Identity = 78/248 (31.45%), Postives = 123/248 (49.60%), Query Frame = 0

Query: 6   VLKTCIAQRDLRTGKFLHALYIKSFVPASTYISNHFILLYSKCRRLSAARRVFDQTQECN 65
           V+  C     L  GK +HA+ +K  V A T +S     +Y KC RL +ARRVFDQT+  +
Sbjct: 269 VMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKD 328

Query: 66  IFSFNALIAAYAKESFVEVARELFDKMSQPDPISYNTLIAAYAQRGDVQSAFQLFVEMRE 125
           + S+ + ++ YA       ARELFD M + + +S+N ++  Y    +   A      MR+
Sbjct: 329 LKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQ 388

Query: 126 ALLDMDGFTLSGIITACG--DDVALIRQLHALSVAAGFDCYASVGNALITYYSKNGFLNE 185
            + ++D  TL  I+  C    DV + +Q H      G+D    V NAL+  Y K G L  
Sbjct: 389 EIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQS 448

Query: 186 AQRIFYGMGEDKDEVSWNSMVVAYMQHREGSKALGLYMEMTLRGLVVD-ILVCVISACAN 245
           A   F  M E +DEVSWN+++    +     +AL  +  M +        L  +++ CAN
Sbjct: 449 ANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGMQVEAKPSKYTLATLLAGCAN 508

Query: 246 MSSPSQGR 251
           + + + G+
Sbjct: 509 IPALNLGK 516

BLAST of Cp4.1LG01g09150 vs. ExPASy Swiss-Prot
Match: O23266 (Pentatricopeptide repeat-containing protein At4g14050, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H13 PE=1 SV=3)

HSP 1 Score: 132.1 bits (331), Expect = 8.7e-30
Identity = 85/254 (33.46%), Postives = 133/254 (52.36%), Query Frame = 0

Query: 3   FRHVLKTCIAQRDLRTGKFLHALYIKSFVPASTYISNHFILLYSKCRRLSAARRVFDQTQ 62
           F  ++K C     +  G+ +H  +I S       + +  + +Y+KC  L++A+ VFD  +
Sbjct: 108 FSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIR 167

Query: 63  ECNIFSFNALIAAYAKESFVEVARELFDKMSQPDPISYNTLIAAYAQRGDVQSAFQLFVE 122
             N  S+ A+++ YAK    E A ELF  +   +  S+  LI+ + Q G    AF +F E
Sbjct: 168 VKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTE 227

Query: 123 MREALLD-MDGFTLSGIITACGDDVALI--RQLHALSVAAGFDCYASVGNALITYYSKNG 182
           MR   +D +D   LS I+ AC +  A I  RQ+H L +A GFD    + NALI  Y+K  
Sbjct: 228 MRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCS 287

Query: 183 FLNEAQRIFYGMGEDKDEVSWNSMVVAYMQHREGSKALGLYMEMTLRGLVVD--ILVCVI 242
            +  A+ IF  M   +D VSW S++V   QH +  KAL LY +M   G+  +    V +I
Sbjct: 288 DVIAAKDIFSRM-RHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLI 347

Query: 243 SACANMSSPSQGRQ 252
            AC+++    +GR+
Sbjct: 348 YACSHVGFVEKGRE 360

BLAST of Cp4.1LG01g09150 vs. ExPASy Swiss-Prot
Match: Q9SKQ4 (Pentatricopeptide repeat-containing protein At2g21090 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E48 PE=2 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 7.4e-29
Identity = 83/276 (30.07%), Postives = 138/276 (50.00%), Query Frame = 0

Query: 6   VLKTCIAQRDLRTGKFLHA-LYIKSFVPASTYISNHFILLYSKCRRLSAARRVFDQTQEC 65
           +L+ C   + L+ GK++H  L I  F   +T +SNH I +Y KC +   A +VFDQ    
Sbjct: 52  LLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLR 111

Query: 66  NIFSFNALIAAYAKESFVEVARELFDKMSQPDPISYNTLIAAYAQRGDVQSAFQLFVEMR 125
           N++S+N +++ Y K   +  AR +FD M + D +S+NT++  YAQ G++  A   + E R
Sbjct: 112 NLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFR 171

Query: 126 EALLDMDGFTLSGIITAC--GDDVALIRQLHALSVAAGF-----------DCYASVG--- 185
            + +  + F+ +G++TAC     + L RQ H   + AGF           D YA  G   
Sbjct: 172 RSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQME 231

Query: 186 -----------------NALITYYSKNGFLNEAQRIFYGMGEDKDEVSWNSMVVAYMQHR 245
                              LI+ Y+K G +  A+++F  M E K+ VSW +++  Y++  
Sbjct: 232 SAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPE-KNPVSWTALIAGYVRQG 291

Query: 246 EGSKALGLYMEMTLRGLVVDILVCVISACANMSSPS 248
            G++AL L+ +M   G+  +        CA+ S  S
Sbjct: 292 SGNRALDLFRKMIALGVKPEQFTFSSCLCASASIAS 326

BLAST of Cp4.1LG01g09150 vs. ExPASy Swiss-Prot
Match: Q9SIT7 (Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E76 PE=3 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 9.6e-29
Identity = 78/254 (30.71%), Postives = 140/254 (55.12%), Query Frame = 0

Query: 3   FRHVLKTCIAQR-DLRTGKFLHALYIKSFVPASTYISNHFILLYSKCRRLSAARRVFDQT 62
           F  +L +CI  +      +++HA  IKS      +I N  I  YSKC  L   R+VFD+ 
Sbjct: 22  FAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKM 81

Query: 63  QECNIFSFNALIAAYAKESFVEVARELFDKMSQPDPISYNTLIAAYAQRGDVQSAFQLFV 122
            + NI+++N+++    K  F++ A  LF  M + D  ++N++++ +AQ    + A   F 
Sbjct: 82  PQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFA 141

Query: 123 EMREALLDMDGFTLSGIITACG--DDVALIRQLHALSVAAGFDCYASVGNALITYYSKNG 182
            M +    ++ ++ + +++AC   +D+    Q+H+L   + F     +G+AL+  YSK G
Sbjct: 142 MMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCG 201

Query: 183 FLNEAQRIFYGMGEDKDEVSWNSMVVAYMQHREGSKALGLYMEMTLRGLVVD--ILVCVI 242
            +N+AQR+F  MG D++ VSWNS++  + Q+    +AL ++  M    +  D   L  VI
Sbjct: 202 NVNDAQRVFDEMG-DRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVI 261

Query: 243 SACANMSSPSQGRQ 252
           SACA++S+   G++
Sbjct: 262 SACASLSAIKVGQE 274

BLAST of Cp4.1LG01g09150 vs. NCBI nr
Match: XP_023547019.1 (pentatricopeptide repeat-containing protein At3g49710 [Cucurbita pepo subsp. pepo] >XP_023547027.1 pentatricopeptide repeat-containing protein At3g49710 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 460 bits (1183), Expect = 9.26e-156
Identity = 236/251 (94.02%), Postives = 240/251 (95.62%), Query Frame = 0

Query: 3   FRHVLKTCIAQRDLRTGKFLHALYIKSFVPASTYISNHFILLYSKCRRLSAARRVFDQTQ 62
           FRHVLKTCIAQRDLRTGKFLHALYIKSFVPASTYISNHFILLYSKCRRLSAARRVFDQTQ
Sbjct: 11  FRHVLKTCIAQRDLRTGKFLHALYIKSFVPASTYISNHFILLYSKCRRLSAARRVFDQTQ 70

Query: 63  ECNIFSFNALIAAYAKESFVEVARELFDKMSQPDPISYNTLIAAYAQRGDVQSAFQLFVE 122
           ECNIFSFNALIAAYAKESFVEVARELFDKMSQPDPISYNTLIAAYAQRGDVQSAFQLFVE
Sbjct: 71  ECNIFSFNALIAAYAKESFVEVARELFDKMSQPDPISYNTLIAAYAQRGDVQSAFQLFVE 130

Query: 123 MREALLDMDGFTLSGIITACGDDVALIRQLHALSVAAGFDCYASVGNALITYYSKNGFLN 182
           MREALLDMDGFTLSGIITACGDDVALIRQLHALSVAAGFDCYASVGNALITYYSKNGFLN
Sbjct: 131 MREALLDMDGFTLSGIITACGDDVALIRQLHALSVAAGFDCYASVGNALITYYSKNGFLN 190

Query: 183 EAQRIFYGMGEDKDEVSWNSMVVAYMQHREGSKALGLYMEMTLRGLVVDI--LVCVISAC 242
           EAQRIFYGMGEDKDEVSWNSMVVAYMQHREGSKALGLYMEMTLRGLVVD+  L  V++A 
Sbjct: 191 EAQRIFYGMGEDKDEVSWNSMVVAYMQHREGSKALGLYMEMTLRGLVVDMFTLASVLTAF 250

Query: 243 ANMSSPSQGRQ 251
            N+   S G Q
Sbjct: 251 TNVQDLSGGLQ 261

BLAST of Cp4.1LG01g09150 vs. NCBI nr
Match: KAG6600674.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 455 bits (1171), Expect = 5.98e-154
Identity = 233/251 (92.83%), Postives = 239/251 (95.22%), Query Frame = 0

Query: 3   FRHVLKTCIAQRDLRTGKFLHALYIKSFVPASTYISNHFILLYSKCRRLSAARRVFDQTQ 62
           FRHVLKTCIAQRDLRTGK LHALYIKSFVPASTYISNHFILLYSKCRRLSAARRVFDQTQ
Sbjct: 11  FRHVLKTCIAQRDLRTGKSLHALYIKSFVPASTYISNHFILLYSKCRRLSAARRVFDQTQ 70

Query: 63  ECNIFSFNALIAAYAKESFVEVARELFDKMSQPDPISYNTLIAAYAQRGDVQSAFQLFVE 122
           ECNIFSFNALIAAYAKESFVEVARELFDKMSQPDP+SYNTLIAAYAQRGDV+SAFQLFVE
Sbjct: 71  ECNIFSFNALIAAYAKESFVEVARELFDKMSQPDPVSYNTLIAAYAQRGDVESAFQLFVE 130

Query: 123 MREALLDMDGFTLSGIITACGDDVALIRQLHALSVAAGFDCYASVGNALITYYSKNGFLN 182
           MREALLDMDGFTLSGIITACGDDVALIRQLHALSVAAGFDCYASVGNALITYYSKNGFLN
Sbjct: 131 MREALLDMDGFTLSGIITACGDDVALIRQLHALSVAAGFDCYASVGNALITYYSKNGFLN 190

Query: 183 EAQRIFYGMGEDKDEVSWNSMVVAYMQHREGSKALGLYMEMTLRGLVVDI--LVCVISAC 242
           EAQRIFYGMGEDKDEVSWNSMVVAYMQHREGSKALGLYMEMTLRGLVVD+  L  V++A 
Sbjct: 191 EAQRIFYGMGEDKDEVSWNSMVVAYMQHREGSKALGLYMEMTLRGLVVDMFTLASVLTAF 250

Query: 243 ANMSSPSQGRQ 251
            N+   S G Q
Sbjct: 251 TNVQDLSGGLQ 261

BLAST of Cp4.1LG01g09150 vs. NCBI nr
Match: XP_022943237.1 (pentatricopeptide repeat-containing protein At3g49710 [Cucurbita moschata])

HSP 1 Score: 451 bits (1161), Expect = 1.93e-152
Identity = 231/251 (92.03%), Postives = 237/251 (94.42%), Query Frame = 0

Query: 3   FRHVLKTCIAQRDLRTGKFLHALYIKSFVPASTYISNHFILLYSKCRRLSAARRVFDQTQ 62
           FRHVLKTCIAQRDLRTG  LHALYIKSFVPASTY SNHFILLYSKCRRLSAARRVFDQTQ
Sbjct: 11  FRHVLKTCIAQRDLRTGMSLHALYIKSFVPASTYFSNHFILLYSKCRRLSAARRVFDQTQ 70

Query: 63  ECNIFSFNALIAAYAKESFVEVARELFDKMSQPDPISYNTLIAAYAQRGDVQSAFQLFVE 122
           ECNIFSFNALIAAYAKESFVEVARELFDKMSQPDP+SYNTLIAAYAQRGDV+SAFQLFVE
Sbjct: 71  ECNIFSFNALIAAYAKESFVEVARELFDKMSQPDPVSYNTLIAAYAQRGDVESAFQLFVE 130

Query: 123 MREALLDMDGFTLSGIITACGDDVALIRQLHALSVAAGFDCYASVGNALITYYSKNGFLN 182
           MREALLDMDGFTLSGIITACGDDVALIRQLHALSVAAGFDCYASVGNALITYYSKNGFLN
Sbjct: 131 MREALLDMDGFTLSGIITACGDDVALIRQLHALSVAAGFDCYASVGNALITYYSKNGFLN 190

Query: 183 EAQRIFYGMGEDKDEVSWNSMVVAYMQHREGSKALGLYMEMTLRGLVVDI--LVCVISAC 242
           EAQRIFYGMGEDKDEVSWNSMVVAYMQHREGSKALGLYMEMTLRGLVVD+  L  V++A 
Sbjct: 191 EAQRIFYGMGEDKDEVSWNSMVVAYMQHREGSKALGLYMEMTLRGLVVDMFTLASVLTAF 250

Query: 243 ANMSSPSQGRQ 251
            N+   S G Q
Sbjct: 251 TNVQDLSGGLQ 261

BLAST of Cp4.1LG01g09150 vs. NCBI nr
Match: KAG7031312.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 455 bits (1171), Expect = 2.64e-150
Identity = 233/251 (92.83%), Postives = 239/251 (95.22%), Query Frame = 0

Query: 3   FRHVLKTCIAQRDLRTGKFLHALYIKSFVPASTYISNHFILLYSKCRRLSAARRVFDQTQ 62
           FRHVLKTCIAQRDLRTGK LHALYIKSFVPASTYISNHFILLYSKCRRLSAARRVFDQTQ
Sbjct: 249 FRHVLKTCIAQRDLRTGKSLHALYIKSFVPASTYISNHFILLYSKCRRLSAARRVFDQTQ 308

Query: 63  ECNIFSFNALIAAYAKESFVEVARELFDKMSQPDPISYNTLIAAYAQRGDVQSAFQLFVE 122
           ECNIFSFNALIAAYAKESFVEVARELFDKMSQPDP+SYNTLIAAYAQRGDV+SAFQLFVE
Sbjct: 309 ECNIFSFNALIAAYAKESFVEVARELFDKMSQPDPVSYNTLIAAYAQRGDVESAFQLFVE 368

Query: 123 MREALLDMDGFTLSGIITACGDDVALIRQLHALSVAAGFDCYASVGNALITYYSKNGFLN 182
           MREALLDMDGFTLSGIITACGDDVALIRQLHALSVAAGFDCYASVGNALITYYSKNGFLN
Sbjct: 369 MREALLDMDGFTLSGIITACGDDVALIRQLHALSVAAGFDCYASVGNALITYYSKNGFLN 428

Query: 183 EAQRIFYGMGEDKDEVSWNSMVVAYMQHREGSKALGLYMEMTLRGLVVDI--LVCVISAC 242
           EAQRIFYGMGEDKDEVSWNSMVVAYMQHREGSKALGLYMEMTLRGLVVD+  L  V++A 
Sbjct: 429 EAQRIFYGMGEDKDEVSWNSMVVAYMQHREGSKALGLYMEMTLRGLVVDMFTLASVLTAF 488

Query: 243 ANMSSPSQGRQ 251
            N+   S G Q
Sbjct: 489 TNVQDLSGGLQ 499

BLAST of Cp4.1LG01g09150 vs. NCBI nr
Match: XP_023000646.1 (pentatricopeptide repeat-containing protein At3g49710-like [Cucurbita maxima])

HSP 1 Score: 444 bits (1141), Expect = 2.00e-149
Identity = 227/251 (90.44%), Postives = 235/251 (93.63%), Query Frame = 0

Query: 3   FRHVLKTCIAQRDLRTGKFLHALYIKSFVPASTYISNHFILLYSKCRRLSAARRVFDQTQ 62
           FRHVLKTCIAQRD+RTGK LHALYIKSFVPASTYISNHFILLYSKCRRLSAARRVFDQTQ
Sbjct: 11  FRHVLKTCIAQRDVRTGKSLHALYIKSFVPASTYISNHFILLYSKCRRLSAARRVFDQTQ 70

Query: 63  ECNIFSFNALIAAYAKESFVEVARELFDKMSQPDPISYNTLIAAYAQRGDVQSAFQLFVE 122
           ECNIFSFNALI+AYAKESFVEVARELFDKMSQPDP+SYNTLIAAYAQRGDV+SAFQLFVE
Sbjct: 71  ECNIFSFNALISAYAKESFVEVARELFDKMSQPDPVSYNTLIAAYAQRGDVESAFQLFVE 130

Query: 123 MREALLDMDGFTLSGIITACGDDVALIRQLHALSVAAGFDCYASVGNALITYYSKNGFLN 182
           MREALLDMDGFTLSGIITACGDDVALIRQLHALSV AGFDCY SVGNALITYYSKN FLN
Sbjct: 131 MREALLDMDGFTLSGIITACGDDVALIRQLHALSVVAGFDCYVSVGNALITYYSKNRFLN 190

Query: 183 EAQRIFYGMGEDKDEVSWNSMVVAYMQHREGSKALGLYMEMTLRGLVVDI--LVCVISAC 242
           EAQRIFYGMGEDKDEVSWNSMVVAYMQHREGSKAL LYMEMTLRGLVVD+  L  V++A 
Sbjct: 191 EAQRIFYGMGEDKDEVSWNSMVVAYMQHREGSKALELYMEMTLRGLVVDMFTLASVLTAF 250

Query: 243 ANMSSPSQGRQ 251
            N+   S G Q
Sbjct: 251 TNVQDLSGGLQ 261

BLAST of Cp4.1LG01g09150 vs. ExPASy TrEMBL
Match: A0A6J1FSH2 (pentatricopeptide repeat-containing protein At3g49710 OS=Cucurbita moschata OX=3662 GN=LOC111448028 PE=3 SV=1)

HSP 1 Score: 451 bits (1161), Expect = 9.33e-153
Identity = 231/251 (92.03%), Postives = 237/251 (94.42%), Query Frame = 0

Query: 3   FRHVLKTCIAQRDLRTGKFLHALYIKSFVPASTYISNHFILLYSKCRRLSAARRVFDQTQ 62
           FRHVLKTCIAQRDLRTG  LHALYIKSFVPASTY SNHFILLYSKCRRLSAARRVFDQTQ
Sbjct: 11  FRHVLKTCIAQRDLRTGMSLHALYIKSFVPASTYFSNHFILLYSKCRRLSAARRVFDQTQ 70

Query: 63  ECNIFSFNALIAAYAKESFVEVARELFDKMSQPDPISYNTLIAAYAQRGDVQSAFQLFVE 122
           ECNIFSFNALIAAYAKESFVEVARELFDKMSQPDP+SYNTLIAAYAQRGDV+SAFQLFVE
Sbjct: 71  ECNIFSFNALIAAYAKESFVEVARELFDKMSQPDPVSYNTLIAAYAQRGDVESAFQLFVE 130

Query: 123 MREALLDMDGFTLSGIITACGDDVALIRQLHALSVAAGFDCYASVGNALITYYSKNGFLN 182
           MREALLDMDGFTLSGIITACGDDVALIRQLHALSVAAGFDCYASVGNALITYYSKNGFLN
Sbjct: 131 MREALLDMDGFTLSGIITACGDDVALIRQLHALSVAAGFDCYASVGNALITYYSKNGFLN 190

Query: 183 EAQRIFYGMGEDKDEVSWNSMVVAYMQHREGSKALGLYMEMTLRGLVVDI--LVCVISAC 242
           EAQRIFYGMGEDKDEVSWNSMVVAYMQHREGSKALGLYMEMTLRGLVVD+  L  V++A 
Sbjct: 191 EAQRIFYGMGEDKDEVSWNSMVVAYMQHREGSKALGLYMEMTLRGLVVDMFTLASVLTAF 250

Query: 243 ANMSSPSQGRQ 251
            N+   S G Q
Sbjct: 251 TNVQDLSGGLQ 261

BLAST of Cp4.1LG01g09150 vs. ExPASy TrEMBL
Match: A0A6J1KGE1 (pentatricopeptide repeat-containing protein At3g49710-like OS=Cucurbita maxima OX=3661 GN=LOC111494876 PE=3 SV=1)

HSP 1 Score: 444 bits (1141), Expect = 9.67e-150
Identity = 227/251 (90.44%), Postives = 235/251 (93.63%), Query Frame = 0

Query: 3   FRHVLKTCIAQRDLRTGKFLHALYIKSFVPASTYISNHFILLYSKCRRLSAARRVFDQTQ 62
           FRHVLKTCIAQRD+RTGK LHALYIKSFVPASTYISNHFILLYSKCRRLSAARRVFDQTQ
Sbjct: 11  FRHVLKTCIAQRDVRTGKSLHALYIKSFVPASTYISNHFILLYSKCRRLSAARRVFDQTQ 70

Query: 63  ECNIFSFNALIAAYAKESFVEVARELFDKMSQPDPISYNTLIAAYAQRGDVQSAFQLFVE 122
           ECNIFSFNALI+AYAKESFVEVARELFDKMSQPDP+SYNTLIAAYAQRGDV+SAFQLFVE
Sbjct: 71  ECNIFSFNALISAYAKESFVEVARELFDKMSQPDPVSYNTLIAAYAQRGDVESAFQLFVE 130

Query: 123 MREALLDMDGFTLSGIITACGDDVALIRQLHALSVAAGFDCYASVGNALITYYSKNGFLN 182
           MREALLDMDGFTLSGIITACGDDVALIRQLHALSV AGFDCY SVGNALITYYSKN FLN
Sbjct: 131 MREALLDMDGFTLSGIITACGDDVALIRQLHALSVVAGFDCYVSVGNALITYYSKNRFLN 190

Query: 183 EAQRIFYGMGEDKDEVSWNSMVVAYMQHREGSKALGLYMEMTLRGLVVDI--LVCVISAC 242
           EAQRIFYGMGEDKDEVSWNSMVVAYMQHREGSKAL LYMEMTLRGLVVD+  L  V++A 
Sbjct: 191 EAQRIFYGMGEDKDEVSWNSMVVAYMQHREGSKALELYMEMTLRGLVVDMFTLASVLTAF 250

Query: 243 ANMSSPSQGRQ 251
            N+   S G Q
Sbjct: 251 TNVQDLSGGLQ 261

BLAST of Cp4.1LG01g09150 vs. ExPASy TrEMBL
Match: A0A6J1C5E0 (pentatricopeptide repeat-containing protein At3g49710 OS=Momordica charantia OX=3673 GN=LOC111008109 PE=3 SV=1)

HSP 1 Score: 396 bits (1017), Expect = 4.94e-131
Identity = 199/251 (79.28%), Postives = 220/251 (87.65%), Query Frame = 0

Query: 3   FRHVLKTCIAQRDLRTGKFLHALYIKSFVPASTYISNHFILLYSKCRRLSAARRVFDQTQ 62
           FR +LKTCIA+RDL TGK LHA+YIKSFVP STY+SNHF+LLYSKCRRL+AARRVFDQTQ
Sbjct: 11  FRQILKTCIAERDLLTGKSLHAMYIKSFVPTSTYLSNHFVLLYSKCRRLAAARRVFDQTQ 70

Query: 63  ECNIFSFNALIAAYAKESFVEVARELFDKMSQPDPISYNTLIAAYAQRGDVQSAFQLFVE 122
           ECNIFSFNALI+AYAKES VEVA +LFD+M QPD +SYNTLIAAYAQRGD++ AFQLFVE
Sbjct: 71  ECNIFSFNALISAYAKESCVEVAHQLFDEMPQPDSVSYNTLIAAYAQRGDIEPAFQLFVE 130

Query: 123 MREALLDMDGFTLSGIITACGDDVALIRQLHALSVAAGFDCYASVGNALITYYSKNGFLN 182
           MREA LDMDGFTLSGIITACGDD+ LIRQLHAL+V AGFD YAS+ NALITYYSKNGFLN
Sbjct: 131 MREAFLDMDGFTLSGIITACGDDIGLIRQLHALTVVAGFDSYASIHNALITYYSKNGFLN 190

Query: 183 EAQRIFYGMGEDKDEVSWNSMVVAYMQHREGSKALGLYMEMTLRGLVVDI--LVCVISAC 242
           EAQ IFYGMGE KDEVSWNSMVVAYMQHREGSKAL LY EM +RGLV+D+  L  V++A 
Sbjct: 191 EAQGIFYGMGEIKDEVSWNSMVVAYMQHREGSKALDLYREMGVRGLVIDMFTLASVLTAF 250

Query: 243 ANMSSPSQGRQ 251
            N+     G Q
Sbjct: 251 TNVQDLLGGLQ 261

BLAST of Cp4.1LG01g09150 vs. ExPASy TrEMBL
Match: A0A5A7TIR2 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold83G00970 PE=3 SV=1)

HSP 1 Score: 379 bits (974), Expect = 1.29e-124
Identity = 192/251 (76.49%), Postives = 214/251 (85.26%), Query Frame = 0

Query: 3   FRHVLKTCIAQRDLRTGKFLHALYIKSFVPASTYISNHFILLYSKCRRLSAARRVFDQTQ 62
           FR +LKTCIAQRDLRTGK LHALYIKSFVP STY+SNHF+LLYSKCRRLSAARRVFD T 
Sbjct: 11  FRKILKTCIAQRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDHTH 70

Query: 63  ECNIFSFNALIAAYAKESFVEVARELFDKMSQPDPISYNTLIAAYAQRGDVQSAFQLFVE 122
           +CN+FSFN LI+AYAKES+VEVAR+LFD+M QPD +SYNTLIAAYAQ GD Q AFQLF+E
Sbjct: 71  DCNVFSFNTLISAYAKESYVEVARKLFDEMPQPDSVSYNTLIAAYAQLGDTQPAFQLFLE 130

Query: 123 MREALLDMDGFTLSGIITACGDDVALIRQLHALSVAAGFDCYASVGNALITYYSKNGFLN 182
           MREA LDMDGFTLSGIITACG +VALI QLHALSV  G D Y SVGN LIT YSKNGFL 
Sbjct: 131 MREAFLDMDGFTLSGIITACGVNVALITQLHALSVVTGLDSYVSVGNTLITCYSKNGFLK 190

Query: 183 EAQRIFYGMGEDKDEVSWNSMVVAYMQHREGSKALGLYMEMTLRGLVVDI--LVCVISAC 242
           EA+RIF+ + ED+DEVSWNSMVVAYMQHREGSKAL LY+EMT+RGL+VDI  L  V++A 
Sbjct: 191 EARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLTAF 250

Query: 243 ANMSSPSQGRQ 251
            N+     G Q
Sbjct: 251 TNVQDLLGGLQ 261

BLAST of Cp4.1LG01g09150 vs. ExPASy TrEMBL
Match: A0A1S3B5M8 (pentatricopeptide repeat-containing protein At3g49710 OS=Cucumis melo OX=3656 GN=LOC103486047 PE=3 SV=1)

HSP 1 Score: 379 bits (974), Expect = 1.29e-124
Identity = 192/251 (76.49%), Postives = 214/251 (85.26%), Query Frame = 0

Query: 3   FRHVLKTCIAQRDLRTGKFLHALYIKSFVPASTYISNHFILLYSKCRRLSAARRVFDQTQ 62
           FR +LKTCIAQRDLRTGK LHALYIKSFVP STY+SNHF+LLYSKCRRLSAARRVFD T 
Sbjct: 11  FRKILKTCIAQRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDHTH 70

Query: 63  ECNIFSFNALIAAYAKESFVEVARELFDKMSQPDPISYNTLIAAYAQRGDVQSAFQLFVE 122
           +CN+FSFN LI+AYAKES+VEVAR+LFD+M QPD +SYNTLIAAYAQ GD Q AFQLF+E
Sbjct: 71  DCNVFSFNTLISAYAKESYVEVARKLFDEMPQPDSVSYNTLIAAYAQLGDTQPAFQLFLE 130

Query: 123 MREALLDMDGFTLSGIITACGDDVALIRQLHALSVAAGFDCYASVGNALITYYSKNGFLN 182
           MREA LDMDGFTLSGIITACG +VALI QLHALSV  G D Y SVGN LIT YSKNGFL 
Sbjct: 131 MREAFLDMDGFTLSGIITACGVNVALITQLHALSVVTGLDSYVSVGNTLITCYSKNGFLK 190

Query: 183 EAQRIFYGMGEDKDEVSWNSMVVAYMQHREGSKALGLYMEMTLRGLVVDI--LVCVISAC 242
           EA+RIF+ + ED+DEVSWNSMVVAYMQHREGSKAL LY+EMT+RGL+VDI  L  V++A 
Sbjct: 191 EARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLTAF 250

Query: 243 ANMSSPSQGRQ 251
            N+     G Q
Sbjct: 251 TNVQDLLGGLQ 261

BLAST of Cp4.1LG01g09150 vs. TAIR 10
Match: AT3G49710.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 279.6 bits (714), Expect = 2.4e-75
Identity = 139/251 (55.38%), Postives = 181/251 (72.11%), Query Frame = 0

Query: 3   FRHVLKTCIAQRDLRTGKFLHALYIKSFVPASTYISNHFILLYSKCRRLSAARRVFDQTQ 62
           FR +L   +A+RDL TGK LHALY+KS V +STY+SNHF+ LYSKC RLS AR  F  T+
Sbjct: 11  FRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTE 70

Query: 63  ECNIFSFNALIAAYAKESFVEVARELFDKMSQPDPISYNTLIAAYAQRGDVQSAFQLFVE 122
           E N+FS+N ++ AYAK+S + +AR+LFD++ QPD +SYNTLI+ YA   +  +A  LF  
Sbjct: 71  EPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKR 130

Query: 123 MREALLDMDGFTLSGIITACGDDVALIRQLHALSVAAGFDCYASVGNALITYYSKNGFLN 182
           MR+   ++DGFTLSG+I AC D V LI+QLH  SV+ GFD Y+SV NA +TYYSK G L 
Sbjct: 131 MRKLGFEVDGFTLSGLIAACCDRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLR 190

Query: 183 EAQRIFYGMGEDKDEVSWNSMVVAYMQHREGSKALGLYMEMTLRGLVVDI--LVCVISAC 242
           EA  +FYGM E +DEVSWNSM+VAY QH+EG+KAL LY EM  +G  +D+  L  V++A 
Sbjct: 191 EAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNAL 250

Query: 243 ANMSSPSQGRQ 252
            ++     GRQ
Sbjct: 251 TSLDHLIGGRQ 261

BLAST of Cp4.1LG01g09150 vs. TAIR 10
Match: AT3G26540.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 132.9 bits (333), Expect = 3.6e-31
Identity = 78/248 (31.45%), Postives = 123/248 (49.60%), Query Frame = 0

Query: 6   VLKTCIAQRDLRTGKFLHALYIKSFVPASTYISNHFILLYSKCRRLSAARRVFDQTQECN 65
           V+  C     L  GK +HA+ +K  V A T +S     +Y KC RL +ARRVFDQT+  +
Sbjct: 269 VMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKD 328

Query: 66  IFSFNALIAAYAKESFVEVARELFDKMSQPDPISYNTLIAAYAQRGDVQSAFQLFVEMRE 125
           + S+ + ++ YA       ARELFD M + + +S+N ++  Y    +   A      MR+
Sbjct: 329 LKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQ 388

Query: 126 ALLDMDGFTLSGIITACG--DDVALIRQLHALSVAAGFDCYASVGNALITYYSKNGFLNE 185
            + ++D  TL  I+  C    DV + +Q H      G+D    V NAL+  Y K G L  
Sbjct: 389 EIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQS 448

Query: 186 AQRIFYGMGEDKDEVSWNSMVVAYMQHREGSKALGLYMEMTLRGLVVD-ILVCVISACAN 245
           A   F  M E +DEVSWN+++    +     +AL  +  M +        L  +++ CAN
Sbjct: 449 ANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGMQVEAKPSKYTLATLLAGCAN 508

Query: 246 MSSPSQGR 251
           + + + G+
Sbjct: 509 IPALNLGK 516

BLAST of Cp4.1LG01g09150 vs. TAIR 10
Match: AT4G14050.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 132.1 bits (331), Expect = 6.2e-31
Identity = 85/254 (33.46%), Postives = 133/254 (52.36%), Query Frame = 0

Query: 3   FRHVLKTCIAQRDLRTGKFLHALYIKSFVPASTYISNHFILLYSKCRRLSAARRVFDQTQ 62
           F  ++K C     +  G+ +H  +I S       + +  + +Y+KC  L++A+ VFD  +
Sbjct: 108 FSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIR 167

Query: 63  ECNIFSFNALIAAYAKESFVEVARELFDKMSQPDPISYNTLIAAYAQRGDVQSAFQLFVE 122
             N  S+ A+++ YAK    E A ELF  +   +  S+  LI+ + Q G    AF +F E
Sbjct: 168 VKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTE 227

Query: 123 MREALLD-MDGFTLSGIITACGDDVALI--RQLHALSVAAGFDCYASVGNALITYYSKNG 182
           MR   +D +D   LS I+ AC +  A I  RQ+H L +A GFD    + NALI  Y+K  
Sbjct: 228 MRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCS 287

Query: 183 FLNEAQRIFYGMGEDKDEVSWNSMVVAYMQHREGSKALGLYMEMTLRGLVVD--ILVCVI 242
            +  A+ IF  M   +D VSW S++V   QH +  KAL LY +M   G+  +    V +I
Sbjct: 288 DVIAAKDIFSRM-RHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLI 347

Query: 243 SACANMSSPSQGRQ 252
            AC+++    +GR+
Sbjct: 348 YACSHVGFVEKGRE 360

BLAST of Cp4.1LG01g09150 vs. TAIR 10
Match: AT2G21090.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 129.0 bits (323), Expect = 5.2e-30
Identity = 83/276 (30.07%), Postives = 138/276 (50.00%), Query Frame = 0

Query: 6   VLKTCIAQRDLRTGKFLHA-LYIKSFVPASTYISNHFILLYSKCRRLSAARRVFDQTQEC 65
           +L+ C   + L+ GK++H  L I  F   +T +SNH I +Y KC +   A +VFDQ    
Sbjct: 52  LLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLR 111

Query: 66  NIFSFNALIAAYAKESFVEVARELFDKMSQPDPISYNTLIAAYAQRGDVQSAFQLFVEMR 125
           N++S+N +++ Y K   +  AR +FD M + D +S+NT++  YAQ G++  A   + E R
Sbjct: 112 NLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFR 171

Query: 126 EALLDMDGFTLSGIITAC--GDDVALIRQLHALSVAAGF-----------DCYASVG--- 185
            + +  + F+ +G++TAC     + L RQ H   + AGF           D YA  G   
Sbjct: 172 RSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQME 231

Query: 186 -----------------NALITYYSKNGFLNEAQRIFYGMGEDKDEVSWNSMVVAYMQHR 245
                              LI+ Y+K G +  A+++F  M E K+ VSW +++  Y++  
Sbjct: 232 SAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPE-KNPVSWTALIAGYVRQG 291

Query: 246 EGSKALGLYMEMTLRGLVVDILVCVISACANMSSPS 248
            G++AL L+ +M   G+  +        CA+ S  S
Sbjct: 292 SGNRALDLFRKMIALGVKPEQFTFSSCLCASASIAS 326

BLAST of Cp4.1LG01g09150 vs. TAIR 10
Match: AT2G13600.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 128.6 bits (322), Expect = 6.8e-30
Identity = 78/254 (30.71%), Postives = 140/254 (55.12%), Query Frame = 0

Query: 3   FRHVLKTCIAQR-DLRTGKFLHALYIKSFVPASTYISNHFILLYSKCRRLSAARRVFDQT 62
           F  +L +CI  +      +++HA  IKS      +I N  I  YSKC  L   R+VFD+ 
Sbjct: 22  FAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKM 81

Query: 63  QECNIFSFNALIAAYAKESFVEVARELFDKMSQPDPISYNTLIAAYAQRGDVQSAFQLFV 122
            + NI+++N+++    K  F++ A  LF  M + D  ++N++++ +AQ    + A   F 
Sbjct: 82  PQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFA 141

Query: 123 EMREALLDMDGFTLSGIITACG--DDVALIRQLHALSVAAGFDCYASVGNALITYYSKNG 182
            M +    ++ ++ + +++AC   +D+    Q+H+L   + F     +G+AL+  YSK G
Sbjct: 142 MMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCG 201

Query: 183 FLNEAQRIFYGMGEDKDEVSWNSMVVAYMQHREGSKALGLYMEMTLRGLVVD--ILVCVI 242
            +N+AQR+F  MG D++ VSWNS++  + Q+    +AL ++  M    +  D   L  VI
Sbjct: 202 NVNDAQRVFDEMG-DRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVI 261

Query: 243 SACANMSSPSQGRQ 252
           SACA++S+   G++
Sbjct: 262 SACASLSAIKVGQE 274

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9M2Y73.4e-7455.38Pentatricopeptide repeat-containing protein At3g49710 OS=Arabidopsis thaliana OX... [more]
Q9LRV25.1e-3031.45Pentatricopeptide repeat-containing protein At3g26540 OS=Arabidopsis thaliana OX... [more]
O232668.7e-3033.46Pentatricopeptide repeat-containing protein At4g14050, mitochondrial OS=Arabidop... [more]
Q9SKQ47.4e-2930.07Pentatricopeptide repeat-containing protein At2g21090 OS=Arabidopsis thaliana OX... [more]
Q9SIT79.6e-2930.71Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX... [more]
Match NameE-valueIdentityDescription
XP_023547019.19.26e-15694.02pentatricopeptide repeat-containing protein At3g49710 [Cucurbita pepo subsp. pep... [more]
KAG6600674.15.98e-15492.83Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... [more]
XP_022943237.11.93e-15292.03pentatricopeptide repeat-containing protein At3g49710 [Cucurbita moschata][more]
KAG7031312.12.64e-15092.83Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... [more]
XP_023000646.12.00e-14990.44pentatricopeptide repeat-containing protein At3g49710-like [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
A0A6J1FSH29.33e-15392.03pentatricopeptide repeat-containing protein At3g49710 OS=Cucurbita moschata OX=3... [more]
A0A6J1KGE19.67e-15090.44pentatricopeptide repeat-containing protein At3g49710-like OS=Cucurbita maxima O... [more]
A0A6J1C5E04.94e-13179.28pentatricopeptide repeat-containing protein At3g49710 OS=Momordica charantia OX=... [more]
A0A5A7TIR21.29e-12476.49Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S3B5M81.29e-12476.49pentatricopeptide repeat-containing protein At3g49710 OS=Cucumis melo OX=3656 GN... [more]
Match NameE-valueIdentityDescription
AT3G49710.12.4e-7555.38Pentatricopeptide repeat (PPR) superfamily protein [more]
AT3G26540.13.6e-3131.45Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT4G14050.16.2e-3133.46Pentatricopeptide repeat (PPR) superfamily protein [more]
AT2G21090.15.2e-3030.07Pentatricopeptide repeat (PPR-like) superfamily protein [more]
AT2G13600.16.8e-3030.71Pentatricopeptide repeat (PPR) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 67..93
e-value: 2.9E-5
score: 24.0
coord: 198..228
e-value: 2.0E-5
score: 24.5
coord: 169..193
e-value: 0.012
score: 15.8
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 67..93
e-value: 4.9E-5
score: 21.2
coord: 198..231
e-value: 4.0E-5
score: 21.5
coord: 98..125
e-value: 2.9E-7
score: 28.3
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 95..142
e-value: 4.2E-10
score: 39.7
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 65..95
score: 9.076014
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 196..230
score: 9.689847
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 96..126
score: 10.994242
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 147..247
e-value: 1.1E-13
score: 52.9
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 1..146
e-value: 2.4E-28
score: 101.4
NoneNo IPR availablePANTHERPTHR47929FAMILY NOT NAMEDcoord: 3..83
coord: 150..249
coord: 70..157
NoneNo IPR availablePANTHERPTHR47929:SF12SUBFAMILY NOT NAMEDcoord: 3..83
coord: 150..249
coord: 70..157

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g09150.1Cp4.1LG01g09150.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding