Cp4.1LG01g09120 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG01g09120
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	protein CURVATURE THYLAKOID 1A, chloroplastic-like isoform X2
Location	Cp4.1LG01: 4439697 .. 4442134 (+)
RNA-Seq Expression	Cp4.1LG01g09120
Synteny	Cp4.1LG01g09120

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TACACCAGCCAAGTGATGAGCTATATATGGCTCTCATCCTCCCATGGAGCCCTCCCCTCCTCTTCCAATGTATAAGAAACACTCGTTCCTCTACCAACCCCATTTCATCTTCGATTTCACCCACCTCTTCACAGACTCCCCTCTCCCGCCATGGCGATGGAACTCTGTGCATGCCGCCCCATTTCCGACCTCCCCGTTTCTTCTCCCCTTCTTGCCAGAAACCAGCTGCTCCGTCCCAAGTGCGCGCTTCCTCTCAAAATGCCCGTAGCCTCGCGTCTTGCTCGCGGCATCCACTTTCGTATGTTTTCAGTTCATTGCATTCTCACTCTGCTATCTAAAATGAATCCCTAGGTTTTCGGTGTGGTGTTCTGTACTTTTTCTGTTGAATTTATGTGCGTTTTGTTTGTGGTTTTTATTTTGGATTGCTTTGCTTGCGTTGTTCTTTGTCGATTCTTATGGTATAACGATGAGCTGATTCGCGATTTCCGTTGGATGTACGTGGTTTTGAACTTTTTTGTTTTCTGAATTCTCTCTTAGGATATCGTCATTTTTCTGCTTCACTGCCGAGAGCAGCAGCCTCTGATGATTCATATGGATCTAGTTCATATATTACTGAAGAACGCGACAGCGCGGCGGTCTCGGAAGATTCTTCTCCTGCTTCTTCGGTCGCCGTGGAAGATTCTCCTCCTGCTTCTTCAGTCGCCGAGGAGAACCTTCCCGCGGAGAATCTTTCATCTGACGAAATTGTGAAACCTGAAGTGCCTAAAGAAGAACCGGTTGAAGACGCGCCCGTTGTAGCGGTGGAGGATTCTCTATCTGCATCTTCAGCTACCGTGGGAGATTCTTCTTCTGCTGAGAATGTTGCGTACAAAGAAACTTCGACAGCTGAAGAACCCAAAGAAGAACCTAAAGAAAAACCAGTTGAGGTTGCGCAAGAATGGACGCTTGATTCATTGAATGATCTGAAAGTAAGAACTTTTATTGAAGCCATGTGATTTATTCTTTTGCAAGTTAATCGTGTTGACCCGTAAGTAAATGTCTTTTGCCATCTCTTTTTTATCTCAACAAATGAGTGCAAAGCTACTGAGATACCCTTTTCAAATTTTTTGGATCACTTGGCTTTTCATTTTTCAAATCTTTTGGATTGCTTGCCCTTTGATTTATCTATCTATTTCTGCTTTCAATATCTTCCCATAGTCTGGACTATGGCTTGATTCCACCGTAAAATACCTTCCTTGGGTAACTTGGACGATTTTTGTCTGTGTGTTAACTATTGAGAATTTGGAGTCCTCTTTTTTTTAATATTTTAATTTATGGTGCTGTTGCCTTCTTCTTTTTAAAAATGGGTTTTGGTTTTTCCCTGCATGCGTATTTCTTTCATTTCTCGTATGACCTTTCGAAGTTAGTTGCAGTGATGATATCATCAAACTTGATAGTATATACAAATGCTACATGAAAGGTCGACAATTATGTCGACCTGAGCGGTTAATCGAGCAACGTAACTTCTCTAATTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNTAACTTCTCTTATTATTTTGTTGTCCATCAAAGTTTCTGTGTCTTCAGTCATAATAGGAAATTTGCTATTTCGAGATGGAAATCAGTATTTCTTATTGAAGTTTGAACTTTTATAGCTCTTGTCAATTAGGAAACACCATTTTGGAATAACTGATATTATAATGTATATGTTTTCATTTTTCGGTTTGAGATTGCTTCATCCTATGAAAGGTTTGATGGTTACTTTTGCTCACAGCTCGAGTCGGTTGATAAATACAGTCTTGCCCTGTATGGTGGTGGTGCCTCTTTTGGCCTCTGGTTGGTTTCAGCCGTTGTTGGTGCTGTTGATTCCATCCCATTGGTGAGTAGTTCTCACTTTTATCTCTGTAAGATTTTGTATTGGATTAGAACTGTATGAGTAAATTGTAGGATGTCATCAATTGGTAAAGTTTCTTAAGGCAAATTTAGAACCGTGCGTTCTTGTAAATCTATAGGTTCCCAAGTTGTTGGAAATTGTGGGGCTTGGTTACACACTGTGGTTCGCGGCTCGCTTTCTGTTATTCAAGGTAATTGCCTTCTGAACTGAAATCCTGTATTTTTTCTTTTGTTGTGATAAATGAGCTAATAATTTTTTTTGTTGCAACCTCTCAGGAAAGTAGAGACGAATTGGCTGCCAAGATTGATGAGATAAAGGAGCAGGTTATTGGTTGAGATTGACGTCTCATTCGGTCTGTAAATTTTTACTGTTAAATCTTAGGTAGATAGTTATGTTTGCATAGATAGATATCTTGGATGTGCTGATGAACATAAATGATATAAATAATTACATTTTGTTTCTAATGAAGCACATGTTACAACGATAGAATCTTGTTTTACATATAGGTATTATAAATAACATAGGAACGTGAA

mRNA sequence

TACACCAGCCAAGTGATGAGCTATATATGGCTCTCATCCTCCCATGGAGCCCTCCCCTCCTCTTCCAATGTATAAGAAACACTCGTTCCTCTACCAACCCCATTTCATCTTCGATTTCACCCACCTCTTCACAGACTCCCCTCTCCCGCCATGGCGATGGAACTCTGTGCATGCCGCCCCATTTCCGACCTCCCCGTTTCTTCTCCCCTTCTTGCCAGAAACCAGCTGCTCCGTCCCAAGTGCGCGCTTCCTCTCAAAATGCCCGTAGCCTCGCGTCTTGCTCGCGGCATCCACTTTCGATATCGTCATTTTTCTGCTTCACTGCCGAGAGCAGCAGCCTCTGATGATTCATATGGATCTAGTTCATATATTACTGAAGAACGCGACAGCGCGGCGGTCTCGGAAGATTCTTCTCCTGCTTCTTCGGTCGCCGTGGAAGATTCTCCTCCTGCTTCTTCAGTCGCCGAGGAGAACCTTCCCGCGGAGAATCTTTCATCTGACGAAATTGTGAAACCTGAAGTGCCTAAAGAAGAACCGGTTGAAGACGCGCCCGTTGTAGCGGTGGAGGATTCTCTATCTGCATCTTCAGCTACCGTGGGAGATTCTTCTTCTGCTGAGAATGTTGCGTACAAAGAAACTTCGACAGCTGAAGAACCCAAAGAAGAACCTAAAGAAAAACCAGTTGAGGTTGCGCAAGAATGGACGCTTGATTCATTGAATGATCTGAAACTCGAGTCGGTTGATAAATACAGTCTTGCCCTGTATGGTGGTGGTGCCTCTTTTGGCCTCTGGTTGGTTTCAGCCGTTGTTGGTGCTGTTGATTCCATCCCATTGGTTCCCAAGTTGTTGGAAATTGTGGGGCTTGGTTACACACTGTGGTTCGCGGCTCGCTTTCTGTTATTCAAGGAAAGTAGAGACGAATTGGCTGCCAAGATTGATGAGATAAAGGAGCAGGTTATTGGTTGAGATTGACGTCTCATTCGGTCTGTAAATTTTTACTGTTAAATCTTAGGTAGATAGTTATGTTTGCATAGATAGATATCTTGGATGTGCTGATGAACATAAATGATATAAATAATTACATTTTGTTTCTAATGAAGCACATGTTACAACGATAGAATCTTGTTTTACATATAGGTATTATAAATAACATAGGAACGTGAA

Coding sequence (CDS)

ATGGCGATGGAACTCTGTGCATGCCGCCCCATTTCCGACCTCCCCGTTTCTTCTCCCCTTCTTGCCAGAAACCAGCTGCTCCGTCCCAAGTGCGCGCTTCCTCTCAAAATGCCCGTAGCCTCGCGTCTTGCTCGCGGCATCCACTTTCGATATCGTCATTTTTCTGCTTCACTGCCGAGAGCAGCAGCCTCTGATGATTCATATGGATCTAGTTCATATATTACTGAAGAACGCGACAGCGCGGCGGTCTCGGAAGATTCTTCTCCTGCTTCTTCGGTCGCCGTGGAAGATTCTCCTCCTGCTTCTTCAGTCGCCGAGGAGAACCTTCCCGCGGAGAATCTTTCATCTGACGAAATTGTGAAACCTGAAGTGCCTAAAGAAGAACCGGTTGAAGACGCGCCCGTTGTAGCGGTGGAGGATTCTCTATCTGCATCTTCAGCTACCGTGGGAGATTCTTCTTCTGCTGAGAATGTTGCGTACAAAGAAACTTCGACAGCTGAAGAACCCAAAGAAGAACCTAAAGAAAAACCAGTTGAGGTTGCGCAAGAATGGACGCTTGATTCATTGAATGATCTGAAACTCGAGTCGGTTGATAAATACAGTCTTGCCCTGTATGGTGGTGGTGCCTCTTTTGGCCTCTGGTTGGTTTCAGCCGTTGTTGGTGCTGTTGATTCCATCCCATTGGTTCCCAAGTTGTTGGAAATTGTGGGGCTTGGTTACACACTGTGGTTCGCGGCTCGCTTTCTGTTATTCAAGGAAAGTAGAGACGAATTGGCTGCCAAGATTGATGAGATAAAGGAGCAGGTTATTGGTTGA

Protein sequence

MAMELCACRPISDLPVSSPLLARNQLLRPKCALPLKMPVASRLARGIHFRYRHFSASLPRAAASDDSYGSSSYITEERDSAAVSEDSSPASSVAVEDSPPASSVAEENLPAENLSSDEIVKPEVPKEEPVEDAPVVAVEDSLSASSATVGDSSSAENVAYKETSTAEEPKEEPKEKPVEVAQEWTLDSLNDLKLESVDKYSLALYGGGASFGLWLVSAVVGAVDSIPLVPKLLEIVGLGYTLWFAARFLLFKESRDELAAKIDEIKEQVIG

Homology

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BLAST of Cp4.1LG01g09120 vs. ExPASy Swiss-Prot
Match: Q8LDD3 (Protein CURVATURE THYLAKOID 1D, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CURT1D PE=1 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 2.5e-22
Identity = 61/136 (44.85%), Postives = 85/136 (62.50%), Query Frame = 0


Query: 136 VAVEDSLSASSATVGDSSSAENVAYKETSTAEEPKEEPKEKPVEVAQEWTLDSLNDLKLE 195
           V  E S   +   V D       A ++ S +E P+ E +E          L+ LND+KL+
Sbjct: 61  VTEETSTGVNEFGVEDRDGVVVAAEEKNSNSEAPQAEDEETQ-------ALEFLNDIKLD 120

Query: 196 SVDKYSLALYGGGASFGLWLVSAVVGAVDSIPLVPKLLEIVGLGYTLWFAARFLLFKESR 255
           S   YS+ LYG GA   L+L SA+V ++++IPL PKL+E+VGLGYTLWF  R+LLFK +R
Sbjct: 121 SDKTYSILLYGSGAIVALYLTSAIVSSLEAIPLFPKLMEVVGLGYTLWFTTRYLLFKRNR 180

Query: 256 DELAAKIDEIKEQVIG 272
           +EL  K+ EIK+QV+G
Sbjct: 181 EELKTKVSEIKKQVLG 189

[Close]

BLAST of Cp4.1LG01g09120 vs. ExPASy Swiss-Prot
Match: O04616 (Protein CURVATURE THYLAKOID 1A, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CURT1A PE=1 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 9.5e-14
Identity = 58/163 (35.58%), Postives = 86/163 (52.76%), Query Frame = 0


Query: 115 SSDEIVKPEVPKEEPVEDAPVVAVEDSLSASSATV------GDSSSAENVAYKETSTAEE 174
           SS  ++ P VP       A       S   SS TV      G+      +     S+ E 
Sbjct: 9   SSMAVMVPRVPAVSTRCSAVPYLPPRSFGRSSFTVPLKLVSGNGLQKVELLKTRASSEET 68

Query: 175 PKEEPKEKPVEVAQEWTLDSLNDLKLESVDKYSLALYGGGASFGLWLVSAVVGAVDSIPL 234
              +  E   ++ ++W  D L        +K ++ +YGGGA   +WL S VVGA++S+PL
Sbjct: 69  SSIDTNELITDLKEKW--DGLE-------NKSTVLIYGGGAIVAVWLSSIVVGAINSVPL 128

Query: 235 VPKLLEIVGLGYTLWFAARFLLFKESRDELAAKIDEIKEQVIG 272
           +PK++E+VGLGYT WF  R+LLFK SR ELA  I+ +K+++ G
Sbjct: 129 LPKVMELVGLGYTGWFVYRYLLFKSSRKELAEDIESLKKKIAG 162

[Close]

BLAST of Cp4.1LG01g09120 vs. ExPASy Swiss-Prot
Match: Q8LCA1 (Protein CURVATURE THYLAKOID 1B, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CURT1B PE=1 SV=2)

HSP 1 Score: 52.4 bits (124), Expect = 9.5e-06
Identity = 42/172 (24.42%), Postives = 78/172 (45.35%), Query Frame = 0


Query: 101 ASSVAEENLPAENLSSDEIVKPEVPKEEPVEDAPVVAVEDSLSASSATVGDSSSAENVAY 160
           +S++ +   P   L+S     P           P + ++    A+ AT        NV  
Sbjct: 9   SSTIIDSRAPPSRLASASASSPS------CISLPTLPIQSHTRAAKATAYCRKIVRNVVT 68

Query: 161 KETS-TAEEPKEEPKEKPVEVAQEWTLDSLNDLKLESVDKYSLALYGGGASFGLWLVSAV 220
           + T+   E P    + +  E+ +   + +  +   +  DKY++          LW  + +
Sbjct: 69  RATTEVGEAPATTTEAETTELPE--IVKTAQEAWEKVDDKYAIGSLAFAGVVALWGSAGM 128

Query: 221 VGAVDSIPLVPKLLEIVGLGYTLWFAARFLLFKESRDELAAKIDEIKEQVIG 272
           + A+D +PLVP +LE+VG+GYT WF  + L+FK  R+ L  K+    + ++G
Sbjct: 129 ISAIDRLPLVPGVLELVGIGYTGWFTYKNLVFKPDREALFEKVKSTYKDILG 172

[Close]

BLAST of Cp4.1LG01g09120 vs. ExPASy Swiss-Prot
Match: Q9M812 (Protein CURVATURE THYLAKOID 1C, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CURT1C PE=1 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 8.0e-05
Identity = 23/77 (29.87%), Postives = 41/77 (53.25%), Query Frame = 0


Query: 195 ESVDKYSLALYGGGASFGLWLVSAVVGAVDSIPLVPKLLEIVGLGYTLWFAARFLLFKES 254
           +S D+  L   G      LW    ++ A+D +P++    E+VG+ ++ WF  R+LLFK  
Sbjct: 79  KSEDRLGLIGLGFAGIVALWASLNLITAIDKLPVISSGFELVGILFSTWFTYRYLLFKPD 138

Query: 255 RDELAAKIDEIKEQVIG 272
           R EL+  + +    ++G
Sbjct: 139 RQELSKIVKKSVADILG 155

[Close]

BLAST of Cp4.1LG01g09120 vs. NCBI nr
Match: XP_023552927.1 (protein CURVATURE THYLAKOID 1A, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 496 bits (1277), Expect = 3.30e-176
Identity = 271/271 (100.00%), Postives = 271/271 (100.00%), Query Frame = 0


Query: 1   MAMELCACRPISDLPVSSPLLARNQLLRPKCALPLKMPVASRLARGIHFRYRHFSASLPR 60
           MAMELCACRPISDLPVSSPLLARNQLLRPKCALPLKMPVASRLARGIHFRYRHFSASLPR
Sbjct: 1   MAMELCACRPISDLPVSSPLLARNQLLRPKCALPLKMPVASRLARGIHFRYRHFSASLPR 60

Query: 61  AAASDDSYGSSSYITEERDSAAVSEDSSPASSVAVEDSPPASSVAEENLPAENLSSDEIV 120
           AAASDDSYGSSSYITEERDSAAVSEDSSPASSVAVEDSPPASSVAEENLPAENLSSDEIV
Sbjct: 61  AAASDDSYGSSSYITEERDSAAVSEDSSPASSVAVEDSPPASSVAEENLPAENLSSDEIV 120

Query: 121 KPEVPKEEPVEDAPVVAVEDSLSASSATVGDSSSAENVAYKETSTAEEPKEEPKEKPVEV 180
           KPEVPKEEPVEDAPVVAVEDSLSASSATVGDSSSAENVAYKETSTAEEPKEEPKEKPVEV
Sbjct: 121 KPEVPKEEPVEDAPVVAVEDSLSASSATVGDSSSAENVAYKETSTAEEPKEEPKEKPVEV 180

Query: 181 AQEWTLDSLNDLKLESVDKYSLALYGGGASFGLWLVSAVVGAVDSIPLVPKLLEIVGLGY 240
           AQEWTLDSLNDLKLESVDKYSLALYGGGASFGLWLVSAVVGAVDSIPLVPKLLEIVGLGY
Sbjct: 181 AQEWTLDSLNDLKLESVDKYSLALYGGGASFGLWLVSAVVGAVDSIPLVPKLLEIVGLGY 240

Query: 241 TLWFAARFLLFKESRDELAAKIDEIKEQVIG 271
           TLWFAARFLLFKESRDELAAKIDEIKEQVIG
Sbjct: 241 TLWFAARFLLFKESRDELAAKIDEIKEQVIG 271

[Close]

BLAST of Cp4.1LG01g09120 vs. NCBI nr
Match: XP_022943256.1 (protein CURVATURE THYLAKOID 1A, chloroplastic-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 474 bits (1221), Expect = 1.13e-167
Identity = 262/271 (96.68%), Postives = 264/271 (97.42%), Query Frame = 0


Query: 1   MAMELCACRPISDLPVSSPLLARNQLLRPKCALPLKMPVASRLARGIHFRYRHFSASLPR 60
           MAMELCACRPISDLPVSSPLLARNQ LRPK ALPLKMPVASRLARGIHFRYRHFS SLPR
Sbjct: 1   MAMELCACRPISDLPVSSPLLARNQHLRPKHALPLKMPVASRLARGIHFRYRHFSVSLPR 60

Query: 61  AAASDDSYGSSSYITEERDSAAVSEDSSPASSVAVEDSPPASSVAEENLPAENLSSDEIV 120
           AAAS++SYGSS YITEERDSAAVSEDSSPASSVAVEDSPPASSVAEENLPAENLSSDEIV
Sbjct: 61  AAASEESYGSSPYITEERDSAAVSEDSSPASSVAVEDSPPASSVAEENLPAENLSSDEIV 120

Query: 121 KPEVPKEEPVEDAPVVAVEDSLSASSATVGDSSSAENVAYKETSTAEEPKEEPKEKPVEV 180
            PEVPKEEPVEDAPVVAVEDSLSASSATVGDSSSAENVAY ETSTAEEPKEEPKEKPVEV
Sbjct: 121 TPEVPKEEPVEDAPVVAVEDSLSASSATVGDSSSAENVAYNETSTAEEPKEEPKEKPVEV 180

Query: 181 AQEWTLDSLNDLKLESVDKYSLALYGGGASFGLWLVSAVVGAVDSIPLVPKLLEIVGLGY 240
           AQEWTLDSL DLKLESVDKYSLALYGGGASFGLWLVSAVVGAVDSIPLVPKLLEIVGLGY
Sbjct: 181 AQEWTLDSLIDLKLESVDKYSLALYGGGASFGLWLVSAVVGAVDSIPLVPKLLEIVGLGY 240

Query: 241 TLWFAARFLLFKESRDELAAKIDEIKEQVIG 271
           TLWFAARFLLFKESRDELAAKIDEIKEQVIG
Sbjct: 241 TLWFAARFLLFKESRDELAAKIDEIKEQVIG 271

[Close]

BLAST of Cp4.1LG01g09120 vs. NCBI nr
Match: KAG6600663.1 (Protein CURVATURE THYLAKOID 1D, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 474 bits (1219), Expect = 2.28e-167
Identity = 261/271 (96.31%), Postives = 263/271 (97.05%), Query Frame = 0


Query: 1   MAMELCACRPISDLPVSSPLLARNQLLRPKCALPLKMPVASRLARGIHFRYRHFSASLPR 60
           MAMELCACRPISDLPVSSPLLARNQ LRPK ALPLKMPVASRLARG+HFRYRHFS SLPR
Sbjct: 1   MAMELCACRPISDLPVSSPLLARNQQLRPKHALPLKMPVASRLARGVHFRYRHFSVSLPR 60

Query: 61  AAASDDSYGSSSYITEERDSAAVSEDSSPASSVAVEDSPPASSVAEENLPAENLSSDEIV 120
           AAASD+SYGSS YITEERDSAAVSEDSSPASSVAVEDSPPASSVAEENLPAENLSSDEIV
Sbjct: 61  AAASDESYGSSPYITEERDSAAVSEDSSPASSVAVEDSPPASSVAEENLPAENLSSDEIV 120

Query: 121 KPEVPKEEPVEDAPVVAVEDSLSASSATVGDSSSAENVAYKETSTAEEPKEEPKEKPVEV 180
            PEVPKEEPVEDAPVVAVEDSLSASSATVGDS SAENVAY ETSTAEEPKEEPKEKPVEV
Sbjct: 121 TPEVPKEEPVEDAPVVAVEDSLSASSATVGDSLSAENVAYNETSTAEEPKEEPKEKPVEV 180

Query: 181 AQEWTLDSLNDLKLESVDKYSLALYGGGASFGLWLVSAVVGAVDSIPLVPKLLEIVGLGY 240
           AQEWTLDSL DLKLESVDKYSLALYGGGASFGLWLVSAVVGAVDSIPLVPKLLEIVGLGY
Sbjct: 181 AQEWTLDSLIDLKLESVDKYSLALYGGGASFGLWLVSAVVGAVDSIPLVPKLLEIVGLGY 240

Query: 241 TLWFAARFLLFKESRDELAAKIDEIKEQVIG 271
           TLWFAARFLLFKESRDELAAKIDEIKEQVIG
Sbjct: 241 TLWFAARFLLFKESRDELAAKIDEIKEQVIG 271

[Close]

BLAST of Cp4.1LG01g09120 vs. NCBI nr
Match: XP_022990797.1 (protein CURVATURE THYLAKOID 1A, chloroplastic-like isoform X3 [Cucurbita maxima])

HSP 1 Score: 470 bits (1209), Expect = 7.60e-166
Identity = 257/271 (94.83%), Postives = 261/271 (96.31%), Query Frame = 0


Query: 1   MAMELCACRPISDLPVSSPLLARNQLLRPKCALPLKMPVASRLARGIHFRYRHFSASLPR 60
           MAMELCACRPISDLPVSSPLLARNQLLRPK ALPLKMP+ASRL RGIHFRYRHFS SLPR
Sbjct: 1   MAMELCACRPISDLPVSSPLLARNQLLRPKHALPLKMPIASRLTRGIHFRYRHFSVSLPR 60

Query: 61  AAASDDSYGSSSYITEERDSAAVSEDSSPASSVAVEDSPPASSVAEENLPAENLSSDEIV 120
           AAASDDSYGSS YITEERDSAAVSEDSSPASSVAVEDSPPASSVAEENLP+ENLSSDEIV
Sbjct: 61  AAASDDSYGSSPYITEERDSAAVSEDSSPASSVAVEDSPPASSVAEENLPSENLSSDEIV 120

Query: 121 KPEVPKEEPVEDAPVVAVEDSLSASSATVGDSSSAENVAYKETSTAEEPKEEPKEKPVEV 180
            PEVPKEEPVEDAPVVAVEDSLSASSA+VGDSSSAENVAY ETST EEPKEEPKEKPVEV
Sbjct: 121 TPEVPKEEPVEDAPVVAVEDSLSASSASVGDSSSAENVAYNETSTDEEPKEEPKEKPVEV 180

Query: 181 AQEWTLDSLNDLKLESVDKYSLALYGGGASFGLWLVSAVVGAVDSIPLVPKLLEIVGLGY 240
           AQEWTLDSLNDLKLESVDKYSLALYGGGA FGLWLVS VVGA DSIPLVPKLLEIVGLGY
Sbjct: 181 AQEWTLDSLNDLKLESVDKYSLALYGGGAFFGLWLVSTVVGAFDSIPLVPKLLEIVGLGY 240

Query: 241 TLWFAARFLLFKESRDELAAKIDEIKEQVIG 271
           T+WFAARFLLFKESRDELAAKIDEIKEQVIG
Sbjct: 241 TVWFAARFLLFKESRDELAAKIDEIKEQVIG 271

[Close]

BLAST of Cp4.1LG01g09120 vs. NCBI nr
Match: XP_022943255.1 (protein CURVATURE THYLAKOID 1A, chloroplastic-like isoform X1 [Cucurbita moschata] >KAG7031301.1 Protein CURVATURE THYLAKOID 1D, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 466 bits (1199), Expect = 3.78e-164
Identity = 262/282 (92.91%), Postives = 264/282 (93.62%), Query Frame = 0


Query: 1   MAMELCACRPISDLPVSSPLLARNQLLRPKCALPLKMPVASRLARGIHFRYRHFSASLPR 60
           MAMELCACRPISDLPVSSPLLARNQ LRPK ALPLKMPVASRLARGIHFRYRHFS SLPR
Sbjct: 1   MAMELCACRPISDLPVSSPLLARNQHLRPKHALPLKMPVASRLARGIHFRYRHFSVSLPR 60

Query: 61  AAASDDSYGSSSYITEERDSAAVSEDSSPASSVAVEDSPPASSVA-----------EENL 120
           AAAS++SYGSS YITEERDSAAVSEDSSPASSVAVEDSPPASSVA           EENL
Sbjct: 61  AAASEESYGSSPYITEERDSAAVSEDSSPASSVAVEDSPPASSVAVEDSPPASSVAEENL 120

Query: 121 PAENLSSDEIVKPEVPKEEPVEDAPVVAVEDSLSASSATVGDSSSAENVAYKETSTAEEP 180
           PAENLSSDEIV PEVPKEEPVEDAPVVAVEDSLSASSATVGDSSSAENVAY ETSTAEEP
Sbjct: 121 PAENLSSDEIVTPEVPKEEPVEDAPVVAVEDSLSASSATVGDSSSAENVAYNETSTAEEP 180

Query: 181 KEEPKEKPVEVAQEWTLDSLNDLKLESVDKYSLALYGGGASFGLWLVSAVVGAVDSIPLV 240
           KEEPKEKPVEVAQEWTLDSL DLKLESVDKYSLALYGGGASFGLWLVSAVVGAVDSIPLV
Sbjct: 181 KEEPKEKPVEVAQEWTLDSLIDLKLESVDKYSLALYGGGASFGLWLVSAVVGAVDSIPLV 240

Query: 241 PKLLEIVGLGYTLWFAARFLLFKESRDELAAKIDEIKEQVIG 271
           PKLLEIVGLGYTLWFAARFLLFKESRDELAAKIDEIKEQVIG
Sbjct: 241 PKLLEIVGLGYTLWFAARFLLFKESRDELAAKIDEIKEQVIG 282

[Close]

BLAST of Cp4.1LG01g09120 vs. ExPASy TrEMBL
Match: A0A6J1FR86 (protein CURVATURE THYLAKOID 1A, chloroplastic-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111448041 PE=4 SV=1)

HSP 1 Score: 474 bits (1221), Expect = 5.46e-168
Identity = 262/271 (96.68%), Postives = 264/271 (97.42%), Query Frame = 0


Query: 1   MAMELCACRPISDLPVSSPLLARNQLLRPKCALPLKMPVASRLARGIHFRYRHFSASLPR 60
           MAMELCACRPISDLPVSSPLLARNQ LRPK ALPLKMPVASRLARGIHFRYRHFS SLPR
Sbjct: 1   MAMELCACRPISDLPVSSPLLARNQHLRPKHALPLKMPVASRLARGIHFRYRHFSVSLPR 60

Query: 61  AAASDDSYGSSSYITEERDSAAVSEDSSPASSVAVEDSPPASSVAEENLPAENLSSDEIV 120
           AAAS++SYGSS YITEERDSAAVSEDSSPASSVAVEDSPPASSVAEENLPAENLSSDEIV
Sbjct: 61  AAASEESYGSSPYITEERDSAAVSEDSSPASSVAVEDSPPASSVAEENLPAENLSSDEIV 120

Query: 121 KPEVPKEEPVEDAPVVAVEDSLSASSATVGDSSSAENVAYKETSTAEEPKEEPKEKPVEV 180
            PEVPKEEPVEDAPVVAVEDSLSASSATVGDSSSAENVAY ETSTAEEPKEEPKEKPVEV
Sbjct: 121 TPEVPKEEPVEDAPVVAVEDSLSASSATVGDSSSAENVAYNETSTAEEPKEEPKEKPVEV 180

Query: 181 AQEWTLDSLNDLKLESVDKYSLALYGGGASFGLWLVSAVVGAVDSIPLVPKLLEIVGLGY 240
           AQEWTLDSL DLKLESVDKYSLALYGGGASFGLWLVSAVVGAVDSIPLVPKLLEIVGLGY
Sbjct: 181 AQEWTLDSLIDLKLESVDKYSLALYGGGASFGLWLVSAVVGAVDSIPLVPKLLEIVGLGY 240

Query: 241 TLWFAARFLLFKESRDELAAKIDEIKEQVIG 271
           TLWFAARFLLFKESRDELAAKIDEIKEQVIG
Sbjct: 241 TLWFAARFLLFKESRDELAAKIDEIKEQVIG 271

[Close]

BLAST of Cp4.1LG01g09120 vs. ExPASy TrEMBL
Match: A0A6J1JJV3 (protein CURVATURE THYLAKOID 1A, chloroplastic-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111487564 PE=4 SV=1)

HSP 1 Score: 470 bits (1209), Expect = 3.68e-166
Identity = 257/271 (94.83%), Postives = 261/271 (96.31%), Query Frame = 0


Query: 1   MAMELCACRPISDLPVSSPLLARNQLLRPKCALPLKMPVASRLARGIHFRYRHFSASLPR 60
           MAMELCACRPISDLPVSSPLLARNQLLRPK ALPLKMP+ASRL RGIHFRYRHFS SLPR
Sbjct: 1   MAMELCACRPISDLPVSSPLLARNQLLRPKHALPLKMPIASRLTRGIHFRYRHFSVSLPR 60

Query: 61  AAASDDSYGSSSYITEERDSAAVSEDSSPASSVAVEDSPPASSVAEENLPAENLSSDEIV 120
           AAASDDSYGSS YITEERDSAAVSEDSSPASSVAVEDSPPASSVAEENLP+ENLSSDEIV
Sbjct: 61  AAASDDSYGSSPYITEERDSAAVSEDSSPASSVAVEDSPPASSVAEENLPSENLSSDEIV 120

Query: 121 KPEVPKEEPVEDAPVVAVEDSLSASSATVGDSSSAENVAYKETSTAEEPKEEPKEKPVEV 180
            PEVPKEEPVEDAPVVAVEDSLSASSA+VGDSSSAENVAY ETST EEPKEEPKEKPVEV
Sbjct: 121 TPEVPKEEPVEDAPVVAVEDSLSASSASVGDSSSAENVAYNETSTDEEPKEEPKEKPVEV 180

Query: 181 AQEWTLDSLNDLKLESVDKYSLALYGGGASFGLWLVSAVVGAVDSIPLVPKLLEIVGLGY 240
           AQEWTLDSLNDLKLESVDKYSLALYGGGA FGLWLVS VVGA DSIPLVPKLLEIVGLGY
Sbjct: 181 AQEWTLDSLNDLKLESVDKYSLALYGGGAFFGLWLVSTVVGAFDSIPLVPKLLEIVGLGY 240

Query: 241 TLWFAARFLLFKESRDELAAKIDEIKEQVIG 271
           T+WFAARFLLFKESRDELAAKIDEIKEQVIG
Sbjct: 241 TVWFAARFLLFKESRDELAAKIDEIKEQVIG 271

[Close]

BLAST of Cp4.1LG01g09120 vs. ExPASy TrEMBL
Match: A0A6J1FXL3 (protein CURVATURE THYLAKOID 1A, chloroplastic-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111448041 PE=4 SV=1)

HSP 1 Score: 466 bits (1199), Expect = 1.83e-164
Identity = 262/282 (92.91%), Postives = 264/282 (93.62%), Query Frame = 0


Query: 1   MAMELCACRPISDLPVSSPLLARNQLLRPKCALPLKMPVASRLARGIHFRYRHFSASLPR 60
           MAMELCACRPISDLPVSSPLLARNQ LRPK ALPLKMPVASRLARGIHFRYRHFS SLPR
Sbjct: 1   MAMELCACRPISDLPVSSPLLARNQHLRPKHALPLKMPVASRLARGIHFRYRHFSVSLPR 60

Query: 61  AAASDDSYGSSSYITEERDSAAVSEDSSPASSVAVEDSPPASSVA-----------EENL 120
           AAAS++SYGSS YITEERDSAAVSEDSSPASSVAVEDSPPASSVA           EENL
Sbjct: 61  AAASEESYGSSPYITEERDSAAVSEDSSPASSVAVEDSPPASSVAVEDSPPASSVAEENL 120

Query: 121 PAENLSSDEIVKPEVPKEEPVEDAPVVAVEDSLSASSATVGDSSSAENVAYKETSTAEEP 180
           PAENLSSDEIV PEVPKEEPVEDAPVVAVEDSLSASSATVGDSSSAENVAY ETSTAEEP
Sbjct: 121 PAENLSSDEIVTPEVPKEEPVEDAPVVAVEDSLSASSATVGDSSSAENVAYNETSTAEEP 180

Query: 181 KEEPKEKPVEVAQEWTLDSLNDLKLESVDKYSLALYGGGASFGLWLVSAVVGAVDSIPLV 240
           KEEPKEKPVEVAQEWTLDSL DLKLESVDKYSLALYGGGASFGLWLVSAVVGAVDSIPLV
Sbjct: 181 KEEPKEKPVEVAQEWTLDSLIDLKLESVDKYSLALYGGGASFGLWLVSAVVGAVDSIPLV 240

Query: 241 PKLLEIVGLGYTLWFAARFLLFKESRDELAAKIDEIKEQVIG 271
           PKLLEIVGLGYTLWFAARFLLFKESRDELAAKIDEIKEQVIG
Sbjct: 241 PKLLEIVGLGYTLWFAARFLLFKESRDELAAKIDEIKEQVIG 282

[Close]

BLAST of Cp4.1LG01g09120 vs. ExPASy TrEMBL
Match: A0A6J1JNY2 (protein CURVATURE THYLAKOID 1A, chloroplastic-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111487564 PE=4 SV=1)

HSP 1 Score: 461 bits (1187), Expect = 1.23e-162
Identity = 257/282 (91.13%), Postives = 261/282 (92.55%), Query Frame = 0


Query: 1   MAMELCACRPISDLPVSSPLLARNQLLRPKCALPLKMPVASRLARGIHFRYRHFSASLPR 60
           MAMELCACRPISDLPVSSPLLARNQLLRPK ALPLKMP+ASRL RGIHFRYRHFS SLPR
Sbjct: 1   MAMELCACRPISDLPVSSPLLARNQLLRPKHALPLKMPIASRLTRGIHFRYRHFSVSLPR 60

Query: 61  AAASDDSYGSSSYITEERDSAAVSEDSSPASSVAVEDS-----------PPASSVAEENL 120
           AAASDDSYGSS YITEERDSAAVSEDSSPASSVAVEDS           PPASSVAEENL
Sbjct: 61  AAASDDSYGSSPYITEERDSAAVSEDSSPASSVAVEDSSPASSVAVEDSPPASSVAEENL 120

Query: 121 PAENLSSDEIVKPEVPKEEPVEDAPVVAVEDSLSASSATVGDSSSAENVAYKETSTAEEP 180
           P+ENLSSDEIV PEVPKEEPVEDAPVVAVEDSLSASSA+VGDSSSAENVAY ETST EEP
Sbjct: 121 PSENLSSDEIVTPEVPKEEPVEDAPVVAVEDSLSASSASVGDSSSAENVAYNETSTDEEP 180

Query: 181 KEEPKEKPVEVAQEWTLDSLNDLKLESVDKYSLALYGGGASFGLWLVSAVVGAVDSIPLV 240
           KEEPKEKPVEVAQEWTLDSLNDLKLESVDKYSLALYGGGA FGLWLVS VVGA DSIPLV
Sbjct: 181 KEEPKEKPVEVAQEWTLDSLNDLKLESVDKYSLALYGGGAFFGLWLVSTVVGAFDSIPLV 240

Query: 241 PKLLEIVGLGYTLWFAARFLLFKESRDELAAKIDEIKEQVIG 271
           PKLLEIVGLGYT+WFAARFLLFKESRDELAAKIDEIKEQVIG
Sbjct: 241 PKLLEIVGLGYTVWFAARFLLFKESRDELAAKIDEIKEQVIG 282

[Close]

BLAST of Cp4.1LG01g09120 vs. ExPASy TrEMBL
Match: A0A6J1JR19 (protein CURVATURE THYLAKOID 1A, chloroplastic-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111487564 PE=4 SV=1)

HSP 1 Score: 457 bits (1177), Expect = 5.90e-161
Identity = 257/292 (88.01%), Postives = 261/292 (89.38%), Query Frame = 0


Query: 1   MAMELCACRPISDLPVSSPLLARNQLLRPKCALPLKMPVASRLARGIHFRYRHFSASLPR 60
           MAMELCACRPISDLPVSSPLLARNQLLRPK ALPLKMP+ASRL RGIHFRYRHFS SLPR
Sbjct: 1   MAMELCACRPISDLPVSSPLLARNQLLRPKHALPLKMPIASRLTRGIHFRYRHFSVSLPR 60

Query: 61  AAASDDSYGSSSYITEERDSAAVSEDSSPASSVAVEDS---------------------P 120
           AAASDDSYGSS YITEERDSAAVSEDSSPASSVAVEDS                     P
Sbjct: 61  AAASDDSYGSSPYITEERDSAAVSEDSSPASSVAVEDSSPASSVAVEDAPPASVAVEDSP 120

Query: 121 PASSVAEENLPAENLSSDEIVKPEVPKEEPVEDAPVVAVEDSLSASSATVGDSSSAENVA 180
           PASSVAEENLP+ENLSSDEIV PEVPKEEPVEDAPVVAVEDSLSASSA+VGDSSSAENVA
Sbjct: 121 PASSVAEENLPSENLSSDEIVTPEVPKEEPVEDAPVVAVEDSLSASSASVGDSSSAENVA 180

Query: 181 YKETSTAEEPKEEPKEKPVEVAQEWTLDSLNDLKLESVDKYSLALYGGGASFGLWLVSAV 240
           Y ETST EEPKEEPKEKPVEVAQEWTLDSLNDLKLESVDKYSLALYGGGA FGLWLVS V
Sbjct: 181 YNETSTDEEPKEEPKEKPVEVAQEWTLDSLNDLKLESVDKYSLALYGGGAFFGLWLVSTV 240

Query: 241 VGAVDSIPLVPKLLEIVGLGYTLWFAARFLLFKESRDELAAKIDEIKEQVIG 271
           VGA DSIPLVPKLLEIVGLGYT+WFAARFLLFKESRDELAAKIDEIKEQVIG
Sbjct: 241 VGAFDSIPLVPKLLEIVGLGYTVWFAARFLLFKESRDELAAKIDEIKEQVIG 292

[Close]

BLAST of Cp4.1LG01g09120 vs. TAIR 10
Match: AT4G38100.1 (unknown protein; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G01150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 107.5 bits (267), Expect = 1.8e-23
Identity = 61/136 (44.85%), Postives = 85/136 (62.50%), Query Frame = 0


Query: 136 VAVEDSLSASSATVGDSSSAENVAYKETSTAEEPKEEPKEKPVEVAQEWTLDSLNDLKLE 195
           V  E S   +   V D       A ++ S +E P+ E +E          L+ LND+KL+
Sbjct: 61  VTEETSTGVNEFGVEDRDGVVVAAEEKNSNSEAPQAEDEETQ-------ALEFLNDIKLD 120

Query: 196 SVDKYSLALYGGGASFGLWLVSAVVGAVDSIPLVPKLLEIVGLGYTLWFAARFLLFKESR 255
           S   YS+ LYG GA   L+L SA+V ++++IPL PKL+E+VGLGYTLWF  R+LLFK +R
Sbjct: 121 SDKTYSILLYGSGAIVALYLTSAIVSSLEAIPLFPKLMEVVGLGYTLWFTTRYLLFKRNR 180

Query: 256 DELAAKIDEIKEQVIG 272
           +EL  K+ EIK+QV+G
Sbjct: 181 EELKTKVSEIKKQVLG 189

[Close]

BLAST of Cp4.1LG01g09120 vs. TAIR 10
Match: AT4G01150.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, plastoglobule, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G38100.1); Has 323 Blast hits to 323 proteins in 59 species: Archae - 0; Bacteria - 107; Metazoa - 0; Fungi - 0; Plants - 206; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). )

HSP 1 Score: 79.0 bits (193), Expect = 6.7e-15
Identity = 58/163 (35.58%), Postives = 86/163 (52.76%), Query Frame = 0


Query: 115 SSDEIVKPEVPKEEPVEDAPVVAVEDSLSASSATV------GDSSSAENVAYKETSTAEE 174
           SS  ++ P VP       A       S   SS TV      G+      +     S+ E 
Sbjct: 9   SSMAVMVPRVPAVSTRCSAVPYLPPRSFGRSSFTVPLKLVSGNGLQKVELLKTRASSEET 68

Query: 175 PKEEPKEKPVEVAQEWTLDSLNDLKLESVDKYSLALYGGGASFGLWLVSAVVGAVDSIPL 234
              +  E   ++ ++W  D L        +K ++ +YGGGA   +WL S VVGA++S+PL
Sbjct: 69  SSIDTNELITDLKEKW--DGLE-------NKSTVLIYGGGAIVAVWLSSIVVGAINSVPL 128

Query: 235 VPKLLEIVGLGYTLWFAARFLLFKESRDELAAKIDEIKEQVIG 272
           +PK++E+VGLGYT WF  R+LLFK SR ELA  I+ +K+++ G
Sbjct: 129 LPKVMELVGLGYTGWFVYRYLLFKSSRKELAEDIESLKKKIAG 162

[Close]

BLAST of Cp4.1LG01g09120 vs. TAIR 10
Match: AT2G46820.1 (photosystem I P subunit )

HSP 1 Score: 52.4 bits (124), Expect = 6.7e-07
Identity = 42/172 (24.42%), Postives = 78/172 (45.35%), Query Frame = 0


Query: 101 ASSVAEENLPAENLSSDEIVKPEVPKEEPVEDAPVVAVEDSLSASSATVGDSSSAENVAY 160
           +S++ +   P   L+S     P           P + ++    A+ AT        NV  
Sbjct: 9   SSTIIDSRAPPSRLASASASSPS------CISLPTLPIQSHTRAAKATAYCRKIVRNVVT 68

Query: 161 KETS-TAEEPKEEPKEKPVEVAQEWTLDSLNDLKLESVDKYSLALYGGGASFGLWLVSAV 220
           + T+   E P    + +  E+ +   + +  +   +  DKY++          LW  + +
Sbjct: 69  RATTEVGEAPATTTEAETTELPE--IVKTAQEAWEKVDDKYAIGSLAFAGVVALWGSAGM 128

Query: 221 VGAVDSIPLVPKLLEIVGLGYTLWFAARFLLFKESRDELAAKIDEIKEQVIG 272
           + A+D +PLVP +LE+VG+GYT WF  + L+FK  R+ L  K+    + ++G
Sbjct: 129 ISAIDRLPLVPGVLELVGIGYTGWFTYKNLVFKPDREALFEKVKSTYKDILG 172

[Close]

BLAST of Cp4.1LG01g09120 vs. TAIR 10
Match: AT2G46820.2 (photosystem I P subunit )

HSP 1 Score: 52.4 bits (124), Expect = 6.7e-07
Identity = 42/172 (24.42%), Postives = 78/172 (45.35%), Query Frame = 0


Query: 101 ASSVAEENLPAENLSSDEIVKPEVPKEEPVEDAPVVAVEDSLSASSATVGDSSSAENVAY 160
           +S++ +   P   L+S     P           P + ++    A+ AT        NV  
Sbjct: 9   SSTIIDSRAPPSRLASASASSPS------CISLPTLPIQSHTRAAKATAYCRKIVRNVVT 68

Query: 161 KETS-TAEEPKEEPKEKPVEVAQEWTLDSLNDLKLESVDKYSLALYGGGASFGLWLVSAV 220
           + T+   E P    + +  E+ +   + +  +   +  DKY++          LW  + +
Sbjct: 69  RATTEVGEAPATTTEAETTELPE--IVKTAQEAWEKVDDKYAIGSLAFAGVVALWGSAGM 128

Query: 221 VGAVDSIPLVPKLLEIVGLGYTLWFAARFLLFKESRDELAAKIDEIKEQVIG 272
           + A+D +PLVP +LE+VG+GYT WF  + L+FK  R+ L  K+    + ++G
Sbjct: 129 ISAIDRLPLVPGVLELVGIGYTGWFTYKNLVFKPDREALFEKVKSTYKDILG 172

[Close]

BLAST of Cp4.1LG01g09120 vs. TAIR 10
Match: AT1G52220.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: photosystem I P subunit (TAIR:AT2G46820.2); Has 291 Blast hits to 291 proteins in 50 species: Archae - 0; Bacteria - 90; Metazoa - 0; Fungi - 0; Plants - 200; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). )

HSP 1 Score: 49.3 bits (116), Expect = 5.7e-06
Identity = 23/77 (29.87%), Postives = 41/77 (53.25%), Query Frame = 0


Query: 195 ESVDKYSLALYGGGASFGLWLVSAVVGAVDSIPLVPKLLEIVGLGYTLWFAARFLLFKES 254
           +S D+  L   G      LW    ++ A+D +P++    E+VG+ ++ WF  R+LLFK  
Sbjct: 79  KSEDRLGLIGLGFAGIVALWASLNLITAIDKLPVISSGFELVGILFSTWFTYRYLLFKPD 138

Query: 255 RDELAAKIDEIKEQVIG 272
           R EL+  + +    ++G
Sbjct: 139 RQELSKIVKKSVADILG 155

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g09120 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LDD3	2.5e-22	44.85	Protein CURVATURE THYLAKOID 1D, chloroplastic OS=Arabidopsis thaliana OX=3702 GN...	[more]
O04616	9.5e-14	35.58	Protein CURVATURE THYLAKOID 1A, chloroplastic OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q8LCA1	9.5e-06	24.42	Protein CURVATURE THYLAKOID 1B, chloroplastic OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q9M812	8.0e-05	29.87	Protein CURVATURE THYLAKOID 1C, chloroplastic OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of Cp4.1LG01g09120 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023552927.1	3.30e-176	100.00	protein CURVATURE THYLAKOID 1A, chloroplastic-like [Cucurbita pepo subsp. pepo]	[more]
XP_022943256.1	1.13e-167	96.68	protein CURVATURE THYLAKOID 1A, chloroplastic-like isoform X2 [Cucurbita moschat...	[more]
KAG6600663.1	2.28e-167	96.31	Protein CURVATURE THYLAKOID 1D, chloroplastic, partial [Cucurbita argyrosperma s...	[more]
XP_022990797.1	7.60e-166	94.83	protein CURVATURE THYLAKOID 1A, chloroplastic-like isoform X3 [Cucurbita maxima]	[more]
XP_022943255.1	3.78e-164	92.91	protein CURVATURE THYLAKOID 1A, chloroplastic-like isoform X1 [Cucurbita moschat...	[more]

BLAST of Cp4.1LG01g09120 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FR86	5.46e-168	96.68	protein CURVATURE THYLAKOID 1A, chloroplastic-like isoform X2 OS=Cucurbita mosch...	[more]
A0A6J1JJV3	3.68e-166	94.83	protein CURVATURE THYLAKOID 1A, chloroplastic-like isoform X3 OS=Cucurbita maxim...	[more]
A0A6J1FXL3	1.83e-164	92.91	protein CURVATURE THYLAKOID 1A, chloroplastic-like isoform X1 OS=Cucurbita mosch...	[more]
A0A6J1JNY2	1.23e-162	91.13	protein CURVATURE THYLAKOID 1A, chloroplastic-like isoform X2 OS=Cucurbita maxim...	[more]
A0A6J1JR19	5.90e-161	88.01	protein CURVATURE THYLAKOID 1A, chloroplastic-like isoform X1 OS=Cucurbita maxim...	[more]

BLAST of Cp4.1LG01g09120 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G38100.1	1.8e-23	44.85	unknown protein; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 23 pl...	[more]
AT4G01150.1	6.7e-15	35.58	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G46820.1	6.7e-07	24.42	photosystem I P subunit	[more]
AT2G46820.2	6.7e-07	24.42	photosystem I P subunit	[more]
AT1G52220.1	5.7e-06	29.87	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025564	Cyanobacterial aminoacyl-tRNA synthetase, CAAD domain	PFAM	PF14159	CAAD	coord: 198..271 e-value: 1.8E-23 score: 82.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 64..98
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 62..176
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 141..161
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 119..133
None	No IPR available	PANTHER	PTHR33222:SF2	PROTEIN CURVATURE THYLAKOID 1D, CHLOROPLASTIC	coord: 3..271
IPR033344	Protein CURVATURE THYLAKOID 1	PANTHER	PTHR33222	FAMILY NOT NAMED	coord: 3..271

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g09120.1	Cp4.1LG01g09120.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009579	thylakoid