Cp4.1LG01g09040 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG01g09040
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	RNA helicase
Location	Cp4.1LG01: 4446599 .. 4456605 (-)
RNA-Seq Expression	Cp4.1LG01g09040
Synteny	Cp4.1LG01g09040

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATTGCAGTCTAACTGGAAGTAAACTGCCCTAGATTTTGACGTTAGCAACCGCTGCCTTCCTCTCCTCGACGGCCCTCAGCTTCTCTTGCGCTGCCGCCGGCGCTCTTCTCCCCCTCCTCCGCATTGCTGTCGCTAATCGTCTGCCTCCCTCACAAGCCGCGGCGAACGGCTACTCCTCTATCGAGGTAATGAACTTCTCTATTTTCCGCGCAGTCTTTTCAAACTCCAACCGTTCGAACTGAACTGAAAAAACTGAGCCCATTGTTCTGGCTTAATTCGGCTTTGCTTAAAGTTAACGCCGGAGAACGATTTGGTTGTCATTACTCTAAAACTGAAATCTTCAATTTGGTTTCCGGTTCAAGCAAAACCAAAGAAACCGACCTCTATAGGGAGATTAAAGGGTAAAATACTGGTATGAGATATGAGATTTCAACTTAGTTTTTGTTCTATTCTTTTAAGTTTTCAAAACTAACTTCTCTGCCCCTCAAATTTTAATTCAGCTTTCATTTAGTATTTGTAAATTTAATTTAATTAAAGTTCTAAAATTTTAAATTGATTTCTTAGTGGTCACTGAAATTTGAGATTGGTTTCTAATCGGTAGCTATAAAGTTTTGTCGTTAAAAGACTTCAATTTTAATTTTGAACTAATCAAATTTGTAATTAATCTAAAATTTAAATGATCTTAATTTGTAAACAGTTAAAACTCTAGGGACCAAAATGTTCTTTAGGGAAGATTAAATGATATGCTTCACAAATGTTGATAATTTTTCAGCTAAGGTCTTTGTTTTCCTGGTAGTTTATGTACTGGGTTTTGATTATCATACAAGCTTCAAATTTCATGTTCTTACTTTTCAGTTTTTCTCTTTGAATTAGTCTAATGAAACTTACTTTGTTAGGTAAAAGTCTGGTTTCTTGTTACCCATCTATGCCTTTCATGCTTTTCTCAGAACTGTTTTTTTTTTTTTTNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAACAGGGCTGCCTTGAATCTGTTGGAAAATGAAGAAAATGATAGCACTGGGTTTTGAGGGTTCAGCAAACAAGATTGGTGTTGGGGTTGTGACATTAGATGGCAACATTTTGTCAAACCCACGTCACACCTACATTACACCTCCGGGCCATGGCTTTCTTCCTCGTGAAACTGCACATCACCATTTTGAGCACATTCTCCCGTTGATTAAGTCTGCTCTGGAAACTGCAAAAATTACCCCAGAGGATATTGACTGCCTCTGTTACACTAAAGGGCCTGGCATGGGAGCTCCTCTACAAGTTTCTGCTGTTGCTGTGAGGGTTCTTTCTCAGATTTGGAATAAGCCTATTGTTGCTGTTAATCATTGCGTTGCACATATTGAGATGGGAAGGATTGTAACGGGTGCTGATGATCCTGTTGTCTTGTATGTTAGTGGTGGGAATACTCAGGTGATTGCTTATAGTGAAGGAAGGTATAGAATCTTTGGGGAAACTATTGATATTGCCGTTGGAAATTGCTTGGATCGGTTTGCAAGAGTCCTAACGCTATCCAATGACCCAAGTCCTGGATACAATATTGAACAGGTGTAAATTTTTCGTTATTCCATTTATTCTTTTCATTGGATTATTGGGATTGAAAGGGCGTTGAAGCTTAATAGCGTAGGGAGTCTGAAAAGAAAACTTTTAGCTCTTACGTTCTTGGGTTGGAAAAAGCTTAGATAGGTCTTATTCGCGCCTTTTAACCAAAATGTTTCAAATATAATAAATCAAGTAATGCTCTTTGCTTCCTCTGTTGCACGCATAACTTCCTTTTCCTTTTTATAATGCATATGAAATATTTGAAGATGCAATTTGTACTGATAGTCTTATCTTCAAGGTGGGAGAGATATTATGAGAGAAAATGCTCATTGTGTACTTTTTCATTTCTAATTTTCTGAATCCTAACAAATGCTTCTGCTAAATGATGTGTGAAAAATGGTTTCTTTGACTCCCTCGATTGATTTTCTGTGTCCACAGCTTGCAAAGAAGGGAGAAAAGTTTATTGAACTTCCATATGTAGTCAAAGGGATGGATGTATCATTCAGTGGGATATTAAGTTATATTGAAGCAACTGCTGAGGAGAAACTAAAAAGTAACGAGTGTACTCCTGCTGACTTGTGCTACTCTCTACAGGTAATGTATGTTTATTATGTTAATAGTGCTCCATTTCTGGATGAACTGCAAACCTTGGGCCATTCTGTAACTAAGCGAAGTTTGTGAATTGGGCTGTTGCTCTATAATAGATGATCTCAAACTTTCAGCTCATTTGTAGAATTGTTATCCACTCTGACCTTGCCATTCTTCCGTAAAATTACTTACAAATGCTATTTCATCCCTTTCAACGCGCCGTTCTGTATTGTAGGAAACATTGTTTGCTATGCTTGTGGAAATCACAGAACGAGCCATGGCTCACTGCGACAAGAAAGATGTTCTTATAGTGGGTGGCGTAGGTTGTAATGAGCGCTTGCAAGAGATGATGAGAATAATGTGCTCTGAGAGAGGAGGAAGATTATTTGCAACAGATGACCGTTATTGTATTGATAATGGTGCAATGATTGCATATACTGGTCTTCTTGCTTGGGCACATGGCATGTCGACACCATTGGAGGAAGTAACATTCACCCAACGGTTTCGAACCGATGAAGTACATGCTATATGGAGAGAGAAAAAGGATTGGACTGAGCTCATGGAAGAAGACGTCTAGACCATCAAATGCCGCCCTCATTCTCTGCAAGATATAATAGTTGATATGGAAATTAGATGTGTTTGTAGGCGTAATTCTCTTCGGATATTCCATGGCTCTTTAGATGTTCCCTGAAGGCTTATAGATAATAGCATTATTGAAAACTTGGGCAAATGTTCTTTAGGATTAAACTTGTAAATGGTATTTACAGGTCCTTCATGAATAGAACAGCAAAAGAGAGGCAACTCTGAAGGTAAAGATCTCACTGACATAATGGACAAGGAAGGAAGGTGCGAAGTACTTCAGCATTTGCAGCTAGTAGTAGTAAAGGCTGATACTCTTGCTAGTATAGGTTCTATAATCTCTGTCCCACTCACTCTCTCAGTTTTTGGCTTTTTTTGTCCTTGTAATTTTGATGGCCAATTGAATGAACTAATGTATTTATTTGTAAAGATTATTCTAAGGGTCTATTTGGTTTGGATTATCTTTTCAAGTGGTTATTTATTTTTTTTCAGATAAATAACAATAAATACATTTAATAATAAAATTGATAAAATTGAAAATGGTTTTGTATCCTAAGAGAGAACTCAAATGCAAATTTTCAGATAAATAACAATAAATACATTTAATAATAAAATTTTATTATCATTCAAAATATAAAACAATTCATTAAATTTAGCTTTTTAATAAAAAAATATTTTTCTTTTGTAATGCAAAATTAAACTAATAGACAAAATATTGAAATGTANAAAAAAAATAGTTAAAATAATAAATAAATAAATAAAAATTAAAAGAAGAAAAAAAAATTGAGCCTATTTTTAAAATAAAATAAAAAGATTAACAAAAGAAAGAGGAAAACCCTTCCTCCGTTTCAGCAGCTCTGTGTCGCCGCCGCCAACATCGTCTTTCTTCCATACGTGTTGCCGCAGCTTCCTCCCTCCTAGCGTTGCACTGATTTTGGTCGTAGACGATTTGCTGCGAACTCGAGGGATTCTATGGGGAAGCAGGACGAGCCTCTCCATGTGAGTTCCAAAGCGGAACTGAAGCGAAGAGAGAAGCAGCAGAAGAAGGCAAAGTCTGGAGGGTTTGAGTCCTTAGGTCTCAGTCCCAATGTCTACAGGGGAATCAAGCGCAAGGGCTATAGAGTGCCCACTCCAATTCAGAGGAAAACCATGCCGCTCATTCTTTCCGGCAACGATGTGGTGGCCATGGCACGGACGGGCTCAGGTAAAACTGCTGCTTTTTTGGTGCCTATGCTGGAACGGCTTAAACAGCACGAGCCTCAGGGTGGTGTTAGGGCTCTCATCTTGTCTCCTACCAGGGACTTGGCGCTTCAGACTCTCAAGTTCACCAAGGAACTTGGAAAATTCACGGGTCAGTTCAGTGCTCTTAATTGAATTATTGTGATTTGAATGTGTATTGGCATGAGTTATCTCGTATGTTCTTAAACTGAAATAACGATTGGAACATATTTCACTTCACTGGTTTATAAACGTTTTATGTTATTGTTAATGGCATCACAATTGGACGATTCCAAACATCTGAAGAATGTCTCTATTGAGCATGTAACTTTGGAGGTTTCTTGTACGTAGAAATTCTTTTTGTTACTTGGTTATTAGAATCAATTTTGGTTTAGTTAAGCGTGTCGGCCTTGAACCTAGTTATTACTGACTAGTGTTGCTTCCTGTATTACTTTCTTTCCAAATAAGAAACAAAGTGGCTCGTGTTATACTTTCTTTGTGCAATCGATCTCAAAGATGAGAATTTGATTTAGATTAATAAAGGACTCGAGGACAAAAGAAATTACTATCATTTGTAAATTGCTGAGTGAGAAAGATGAATATTCTCCTTTCCTGGAAACCCTCAATAAGATCTATGTCTTTGCATTTTATGCCCTGCCTGCTTAGGATATTTAGCTCAATAATGAAAAGAAAGGGGAGAGAGGATCCTCTATCTGTAAATTAATTCTCCTACTTTACAGAGATGTTCAGATTTAAATATCATCTATTATTTGCTGCAGATCTTCGAATTAGTTTATTGGTTGGCGGTGATAGTATGGAAGCTCAATTTGAAGAATTGGCTCAAAATCCTGATATTATAATTGCCACTCCTGGAAGGTTGATGCACCATTTGTCTGAGGTTGATGACATGACCTTGCGCACTGTGGAATATGTGGTTTTTGATGAAGCTGATTGTCTCTTTGATATGGGTTTTGCTGAGCAGTTGCATAAAATCCTTGCACAACTGAGTGAGAATCGACAGACCTTACTTTTTAGTGCAACTTTACCAAGTGTTCTTGCAGAGTTTGCAAAGGCTGGTCTTCGTGATCCCCAGCTTGTGCGCCTTGATGTAGATAATAAGATTAGCCCTGACTTAAAGCTTGTCTTTTTTACTTTGCGTCAAGAAGAAAAAAATGCTGCACTGTTGTATTTGGTCAGAGAGAAAATCAGTTCCGATGAACAAAGTTTGATTTTTGTATCCACTCGGCATCATGTAGAGTTTTTAAATGTCTTGTTCCGAGAGGAAGGTATTGAGCCATCTGTATGTTATGGTGAAATGGACCAAGATGCTCGCAAGATTCATATATCAAGATTTAGGGCAAGAAAAACAATGTTCTTAATAGTGACTGATGTTGCAGCTAGGGGAATTGACATCCCATTGCTTGATAATGTTATCAACTGGGACTTCCCTCCAAAACCTAAAATCTTCGTACACCGAGTTGGACGAGCTGCAAGGGCTGGTCGAACTGGTGCAGCATTTTCATTTGTGACTTCTGAAGATCTTCCCAACCTTTTAGATCTTCATCTTTTTCTCTCAAAACCTATAAGAGCTGCCCCTACTGAAGAGGAGGTCTTACTTGATAAGGAGGGTGTATTCTCTAAAATAGACAATGCAATTGCAAGTGGAGAAACTGTATATGGTCGTCTCCCTCAGACAGTTATTGATCTTGCTTCCGACAGAATCAGAGAAACCATTGATTCTTCAGCTGACTTGATTTCTCTGCAGAAAACCTGTTCAAATGCATTTCGTATGTATTCAAAGTCAAAACCACTACCTTCGAAAGAGTCTATCAGAAGAGCAAAGGACTTACCTCGTGAAGGATTGCATCCAATCTTCAAAAATATACTAGAAGGTGGTGAATTAAAGGCATTGGCTTTCTCAGAGCGCTTAAAAACATTCAGGTTAAAGCAAATAGCTTGCTTTCCTTTTTCGGTAGTAGGCTTAACATTTCCACAAAAATTAGTTTTGCACTGGTCAATCATGCTTGGAACAATTGTTTATTTGCACCAGGCCCAAGCAGACAATACTAGAGGCTGAAGGAGAAACTGCCAAGTCAAAGCATCGACAGGTTTGTTTATGAGTTTTGTGACTTTTGTAGCTTGTGGCTGTTAGTTAAATACTTTGATGACAGTCTTTTGCTGAATCTATAAGCTTTTTATTTATTAATTATTATTATATATAAGCAATGTTTAAAGGAACCAACATTTTGTGTTGATGAAGATAGAATGACAATCTCGGGTTGACGTGTTAAATACTGCTTATGTATCCTGTTTGTGAGAGAGAATTGTATTGACGAATGTAATGTAAATAAAGGAAGGAAAAGTCCTTAAACAAGGACAATGAGTTATGAAATAGAATCTACTATTAACAGTGATGGGTGATGTAGTATAATTACAAAATTATTTAGAGAAAGAGCTTCAGGCAGAAGAAACAAAAAGTATGGTTCCTCAAAGATCTTTTATGTTCGAAATATTTTCCATCGCTTTTATTCCCTTCAATTCATATTTCTCACACTTCACTCTTCACTCTTCACTCTTCACTCTTCACTCTTAAATGTTTCAAAATATCATCTTGAACCTCAGATCACAATAAATTTGGTGGGTTGAATTCTTGGGTTGTACAAATAAATGTGATGACTTGATGAAATTATTTCCTATAAAAGAAACCCTCTTTTACTTTCAAATTAGAATGTTTACATATTTATCTTATTTAATTCCATTTCGTATAATAATTAAATTTTTAGGTTTTTTGCTTTCCTCATTGATGGAAGTCGAATGATTTCTTCAATAATGGCATTGTTGCAGGGTCCTAGGCAATGGGTTGATGTAATGAAGAGAAAGAGAGCTGTCCATGAGGAGGTCATTAACTTAGTTCATAAGCAACGCTCTGCCAAGCACGTTGAGGAGGTGTGATTTGAGTTTCTTTTCCTAATTTTAAATGTTCATAGTGAGTAGCAAAAGCTTATTGTTGGGCTTTTGACCCACGGAGGTCTGATCTGCCTGATGATGATTTATACATAATTTGAAATTTATTATGTTTATGCTTTTCTTTTCAAAGAATATCTTGCTATGCCTAAAATGTACTTCATATTTCAGGAACTCCCGTTGGAAAACATTTCTCCAAAGGGTAAGAATATGAAAGGTATGTCATTCTCTCTCTTTCTCACCCCTTCCCCATGGCAACTGGAAGAGAGACTGATGTCATTTCATTTGAAGAGTGTGTATGTGATGTGAGCATGGAATGCTACCCAAATCAATTGGAAATTACTTTTATATATGAGAGTTGATTGTTACCCAGACGCTCATATGCCCTTCAATCTAATTTGAGTTCCAATGAGATTTCATGCAAGTTACAAAAATGTAGAGGGGGCTGTGGGACAAAGAGGGTGAAATCAAAACAGATGAATGGCAAGAGTTAGAAAATAATGGAACAGTTTTTTTTTTTTTGTATGTGCACGTGGTTTGAAGACATATCTTGAGGCTTAAACTTGTGGTACTGGTACATTGGTGTGGCTTGTGCCTTTCCATAGGATAGGGCTATCCACCTGACTTCTTTTTTTCAAGGTCAAAGAAACTCTCGTTGAGTTTAGGGTAACAAGGTATTACTTCTAGAATTAACTAGAAGGTGCCTAAGATATCCTCTCTTCTTCAAGGTTTAAACGAGTAAAGTCTAAATGCATTCTTGATGGATAGTTAGCAGCATTCGGATTATTGCCGCAAGAACAGATTTTGCCAAATAAATTCTTAACATGTTCTTATCATGGTTTTTTCTCATGCTAAATAATGACCTCTTGCTTTCATAACTGATTGAATATTTTTTTTCCATATTTTAGGAACTCGAGGATTAAAAAAAAGAAAGACTGCAAGTTTCAAAGACGAGGAGTTCTACATAAATTCCGTACCAACAAATCATGTAGGGCTTTTGCCATTTACTGGCCCTTTTCATTTTTAGAAAAACATCCATTATAAGAATTTCTTATGATGTTGAGAAATGTAAATAGAATAATCATGCTGACTCTTATACCTGCATTTTGGTTTGACCCAGCATACAGAAGCAGGATTAGCAGTAAAAGGCGATCAAGGTTTTGGGTCCAACAGGTACTTCACTAGTACCACTAACCAACAAAGGAGTACTGTAGGGGCTATCCAGCCTGTCATTTGAAGATCATTTTTTACTGTTTTAATTTTTCAATTTCGTTGAAGAGAAGGGGATTAGATTTATGTTTTTTTACTCTTCCCATATTACATATTCGATAACAGTTAACAGTACATCTCTTTTAGGTTGGATAATGCTGTTCTGGATCTAGTCGCTGATGATAGTTCTGGCATGCAGAAACATAAATCTGTATACCATTGGGATAAGGTAGGTTTCAAACACGAGTAAACATAGGTACCAAACATAGGAGTTATGTGGGTACCTAGCATGAATAACTGTAGTTCGTGTTACCCTAAAATTTAGTCATTATAACTTTTTTGAACTTTTTGGTGACAGAGGGGCAAGAAATATGTGAAATTAAACAATGGGGATCGGGTCACAGCCAGTGGAAAGGTGCGTTCTTGACTCTTTTACCAATTGGGTGTTGATTTAAAAATTTCTTTCAACATTGATTCTAGCTTATAGTCAGGATGTTGGGATAATACATTGTTTGAGTTTCTATCAAGTTTCTACATCTCAATTTCTAGGATCTTAGGAATAATGTTAATGAAGCTATTTTCTTCTATAAATTTCACAGATAAAGACAGAAAGTGGTGCAAAAGTAAAAACTAACAAGACCGGCATATACAAGAAATGGAAAGAACGATCACATAATAAGATCTCTCTCAAAGGAATAAGTTTGGGAGATCACGATGGTGAAGCCATGAACCGTGCTGGTAATAGACTTCTTCCTTTTCATTTAGTTAGGTCTCTTTTTATATCCTTTTGGTTTTTGGTTTTCTTAGTTTTTGAAAATTAAGCCTATAAATATTGCTTCCACCCATAGGTTTTTTTTTGTTTTGTTATCTACTTTATTCATATGTTTTTAAAAGCTAAACGAAATCTGGAAGACTAAAAAGTAATTTTTTAAAACTTATTTTTGTTTTTTAGAATTTGGCTAAGAACTCCAATGTTTTCTTAAGGAAGATAAAACACGAAACACATAGTAGAGAAATGATGATGAGAAAAACAACGATGATCTGAAAACAAGCACAGACTAAAGAAACGTTTTGGTGGCTTTCAGCTTTGCTTATTTTTGTCTGCTAAATGAGGTGCAGGAAATCAGCGATTTTCGGGAAATAAAAGAAAGTTTGGATCCGGCAAAAACCAGCATTCAGTGCCTAATGCTCATGTGCGCTCTGAAGTTAAAAATCTCGATCAAATTCGGAAGGAACGACAGAAAAAGGCAACTAGAATTCAAACCATGAAGAACCAACCGAAAAGGGGTAAAAAGAAATCTGGTAAAAAGGGAAACCGAGGAAAGGCGAAGTAGGAAGAAATAAAAGCTTTGTCTTGCTCAAAAAGAGGGAAGATTTTCTATCCACTTCGTTTTTAGGAGACTTAGAAGTTCTCACACTGATTACATGGTCTTATACCGATCTAATCCAAAGTAGAGGAAAAGTAAAGATTTTTAGTTTCCATGCCTCCATTTCATGTGTCTCTTCATTATTTATGTTCAATGCCTCTGTCATCCTTTTTCCCCATAGAATTTAGTAGTTCAAGAACACATGTGGTGTCTGATGGCAAATTATGAGAGGCTGCTTTCTTTCGGCCTATTTTGTAATGTCTTTAAATGCTTCTGGTCGAGTTCAACTAGCCAATACGGGGTGGATTATTATACCTTCAATTTTAAGAAAAGTAGTAGGTGTTTAGCTTATCCATTTAGAGATGGTTGAATTTTATATTTTGAATTCTAATGTATTTTTTGGTTGGGTCTACTCCTATTGTAATTCATGTTTTTGACTTGTTAGATTAGTCCTTATGTTTCAATCCATGAAATTA

mRNA sequence

TATTGCAGTCTAACTGGAAGTAAACTGCCCTAGATTTTGACGTTAGCAACCGCTGCCTTCCTCTCCTCGACGGCCCTCAGCTTCTCTTGCGCTGCCGCCGGCGCTCTTCTCCCCCTCCTCCGCATTGCTGTCGCTAATCGTCTGCCTCCCTCACAAGCCGCGGCGAACGGCTACTCCTCTATCGAGGGCTGCCTTGAATCTAAAATGATAGCACTGGGTTTTGAGGGTTCAGCAAACAAGATTGGTGTTGGGGTTGTGACATTAGATGGCAACATTTTGTCAAACCCACGTCACACCTACATTACACCTCCGGGCCATGGCTTTCTTCCTCGTGAAACTGCACATCACCATTTTGAGCACATTCTCCCGTTGATTAAGTCTGCTCTGGAAACTGCAAAAATTACCCCAGAGGATATTGACTGCCTCTGTTACACTAAAGGGCCTGGCATGGGAGCTCCTCTACAAGTTTCTGCTGTTGCTGTGAGGGTTCTTTCTCAGATTTGGAATAAGCCTATTGTTGCTGTTAATCATTGCGTTGCACATATTGAGATGGGAAGGATTGTAACGGGTGCTGATGATCCTGTTGTCTTGTATGTTAGTGGTGGGAATACTCAGGTGATTGCTTATAGTGAAGGAAGGTATAGAATCTTTGGGGAAACTATTGATATTGCCGTTGGAAATTGCTTGGATCGGTTTGCAAGAGTCCTAACGCTATCCAATGACCCAAGTCCTGGATACAATATTGAACAGCGAAGAGAGAAGCAGCAGAAGAAGGCAAAGTCTGGAGGGTTTGAGTCCTTAGGTCTCAGTCCCAATGTCTACAGGGGAATCAAGCGCAAGGGCTATAGAGTGCCCACTCCAATTCAGAGGAAAACCATGCCGCTCATTCTTTCCGGCAACGATGTGGTGGCCATGGCACGGACGGGCTCAGGTAAAACTGCTGCTTTTTTGGTGCCTATGCTGGAACGGCTTAAACAGCACGAGCCTCAGGGTGGTGTTAGGGCTCTCATCTTGTCTCCTACCAGGGACTTGGCGCTTCAGACTCTCAAGTTCACCAAGGAACTTGGAAAATTCACGGATCTTCGAATTAGTTTATTGGTTGGCGGTGATAGTATGGAAGCTCAATTTGAAGAATTGGCTCAAAATCCTGATATTATAATTGCCACTCCTGGAAGGTTGATGCACCATTTGTCTGAGGTTGATGACATGACCTTGCGCACTGTGGAATATGTGGTTTTTGATGAAGCTGATTGTCTCTTTGATATGGGTTTTGCTGAGCAGTTGCATAAAATCCTTGCACAACTGAGTGAGAATCGACAGACCTTACTTTTTAGTGCAACTTTACCAAGTGTTCTTGCAGAGTTTGCAAAGGCTGGTCTTCGTGATCCCCAGCTTGTGCGCCTTGATGTAGATAATAAGATTAGCCCTGACTTAAAGCTTGTCTTTTTTACTTTGCGTCAAGAAGAAAAAAATGCTGCACTGTTGTATTTGGTCAGAGAGAAAATCAGTTCCGATGAACAAAGTTTGATTTTTGTATCCACTCGGCATCATGTAGAGTTTTTAAATGTCTTGTTCCGAGAGGAAGGTATTGAGCCATCTGTATGTTATGGTGAAATGGACCAAGATGCTCGCAAGATTCATATATCAAGATTTAGGGCAAGAAAAACAATGTTCTTAATAGTGACTGATGTTGCAGCTAGGGGAATTGACATCCCATTGCTTGATAATGTTATCAACTGGGACTTCCCTCCAAAACCTAAAATCTTCGTACACCGAGTTGGACGAGCTGCAAGGGCTGGTCGAACTGGTGCAGCATTTTCATTTGTGACTTCTGAAGATCTTCCCAACCTTTTAGATCTTCATCTTTTTCTCTCAAAACCTATAAGAGCTGCCCCTACTGAAGAGGAGGTCTTACTTGATAAGGAGGGTGTATTCTCTAAAATAGACAATGCAATTGCAAGTGGAGAAACTGTATATGGTCGTCTCCCTCAGACAGTTATTGATCTTGCTTCCGACAGAATCAGAGAAACCATTGATTCTTCAGCTGACTTGATTTCTCTGCAGAAAACCTGTTCAAATGCATTTCGTATGTATTCAAAGTCAAAACCACTACCTTCGAAAGAGTCTATCAGAAGAGCAAAGGACTTACCTCGTGAAGGATTGCATCCAATCTTCAAAAATATACTAGAAGGTGGTGAATTAAAGGCATTGGCTTTCTCAGAGCGCTTAAAAACATTCAGGCCCAAGCAGACAATACTAGAGGCTGAAGGAGAAACTGCCAAGTCAAAGCATCGACAGGGTCCTAGGCAATGGGTTGATGTAATGAAGAGAAAGAGAGCTGTCCATGAGGAGGTCATTAACTTAGTTCATAAGCAACGCTCTGCCAAGCACGTTGAGGAGGAACTCCCGTTGGAAAACATTTCTCCAAAGGGTAAGAATATGAAAGGAACTCGAGGATTAAAAAAAAGAAAGACTGCAAGTTTCAAAGACGAGGAGTTCTACATAAATTCCGTACCAACAAATCATCATACAGAAGCAGGATTAGCAGTAAAAGGCGATCAAGGTTTTGGGTCCAACAGGTTGGATAATGCTGTTCTGGATCTAGTCGCTGATGATAGTTCTGGCATGCAGAAACATAAATCTGTATACCATTGGGATAAGAGGGGCAAGAAATATGTGAAATTAAACAATGGGGATCGGGTCACAGCCAGTGGAAAGATAAAGACAGAAAGTGGTGCAAAAGTAAAAACTAACAAGACCGGCATATACAAGAAATGGAAAGAACGATCACATAATAAGATCTCTCTCAAAGGAATAAGAAATCAGCGATTTTCGGGAAATAAAAGAAAGTTTGGATCCGGCAAAAACCAGCATTCAGTGCCTAATGCTCATGTGCGCTCTGAAGTTAAAAATCTCGATCAAATTCGGAAGGAACGACAGAAAAAGGCAACTAGAATTCAAACCATGAAGAACCAACCGAAAAGGGGTAAAAAGAAATCTGGTAAAAAGGGAAACCGAGGAAAGGCGAAGTAGGAAGAAATAAAAGCTTTGTCTTGCTCAAAAAGAGGGAAGATTTTCTATCCACTTCGTTTTTAGGAGACTTAGAAGTTCTCACACTGATTACATGGTCTTATACCGATCTAATCCAAAGTAGAGGAAAAGTAAAGATTTTTAGTTTCCATGCCTCCATTTCATGTGTCTCTTCATTATTTATGTTCAATGCCTCTGTCATCCTTTTTCCCCATAGAATTTAGTAGTTCAAGAACACATGTGGTGTCTGATGGCAAATTATGAGAGGCTGCTTTCTTTCGGCCTATTTTGTAATGTCTTTAAATGCTTCTGGTCGAGTTCAACTAGCCAATACGGGGTGGATTATTATACCTTCAATTTTAAGAAAAGTAGTAGGTGTTTAGCTTATCCATTTAGAGATGGTTGAATTTTATATTTTGAATTCTAATGTATTTTTTGGTTGGGTCTACTCCTATTGTAATTCATGTTTTTGACTTGTTAGATTAGTCCTTATGTTTCAATCCATGAAATTA

Coding sequence (CDS)

ATGATAGCACTGGGTTTTGAGGGTTCAGCAAACAAGATTGGTGTTGGGGTTGTGACATTAGATGGCAACATTTTGTCAAACCCACGTCACACCTACATTACACCTCCGGGCCATGGCTTTCTTCCTCGTGAAACTGCACATCACCATTTTGAGCACATTCTCCCGTTGATTAAGTCTGCTCTGGAAACTGCAAAAATTACCCCAGAGGATATTGACTGCCTCTGTTACACTAAAGGGCCTGGCATGGGAGCTCCTCTACAAGTTTCTGCTGTTGCTGTGAGGGTTCTTTCTCAGATTTGGAATAAGCCTATTGTTGCTGTTAATCATTGCGTTGCACATATTGAGATGGGAAGGATTGTAACGGGTGCTGATGATCCTGTTGTCTTGTATGTTAGTGGTGGGAATACTCAGGTGATTGCTTATAGTGAAGGAAGGTATAGAATCTTTGGGGAAACTATTGATATTGCCGTTGGAAATTGCTTGGATCGGTTTGCAAGAGTCCTAACGCTATCCAATGACCCAAGTCCTGGATACAATATTGAACAGCGAAGAGAGAAGCAGCAGAAGAAGGCAAAGTCTGGAGGGTTTGAGTCCTTAGGTCTCAGTCCCAATGTCTACAGGGGAATCAAGCGCAAGGGCTATAGAGTGCCCACTCCAATTCAGAGGAAAACCATGCCGCTCATTCTTTCCGGCAACGATGTGGTGGCCATGGCACGGACGGGCTCAGGTAAAACTGCTGCTTTTTTGGTGCCTATGCTGGAACGGCTTAAACAGCACGAGCCTCAGGGTGGTGTTAGGGCTCTCATCTTGTCTCCTACCAGGGACTTGGCGCTTCAGACTCTCAAGTTCACCAAGGAACTTGGAAAATTCACGGATCTTCGAATTAGTTTATTGGTTGGCGGTGATAGTATGGAAGCTCAATTTGAAGAATTGGCTCAAAATCCTGATATTATAATTGCCACTCCTGGAAGGTTGATGCACCATTTGTCTGAGGTTGATGACATGACCTTGCGCACTGTGGAATATGTGGTTTTTGATGAAGCTGATTGTCTCTTTGATATGGGTTTTGCTGAGCAGTTGCATAAAATCCTTGCACAACTGAGTGAGAATCGACAGACCTTACTTTTTAGTGCAACTTTACCAAGTGTTCTTGCAGAGTTTGCAAAGGCTGGTCTTCGTGATCCCCAGCTTGTGCGCCTTGATGTAGATAATAAGATTAGCCCTGACTTAAAGCTTGTCTTTTTTACTTTGCGTCAAGAAGAAAAAAATGCTGCACTGTTGTATTTGGTCAGAGAGAAAATCAGTTCCGATGAACAAAGTTTGATTTTTGTATCCACTCGGCATCATGTAGAGTTTTTAAATGTCTTGTTCCGAGAGGAAGGTATTGAGCCATCTGTATGTTATGGTGAAATGGACCAAGATGCTCGCAAGATTCATATATCAAGATTTAGGGCAAGAAAAACAATGTTCTTAATAGTGACTGATGTTGCAGCTAGGGGAATTGACATCCCATTGCTTGATAATGTTATCAACTGGGACTTCCCTCCAAAACCTAAAATCTTCGTACACCGAGTTGGACGAGCTGCAAGGGCTGGTCGAACTGGTGCAGCATTTTCATTTGTGACTTCTGAAGATCTTCCCAACCTTTTAGATCTTCATCTTTTTCTCTCAAAACCTATAAGAGCTGCCCCTACTGAAGAGGAGGTCTTACTTGATAAGGAGGGTGTATTCTCTAAAATAGACAATGCAATTGCAAGTGGAGAAACTGTATATGGTCGTCTCCCTCAGACAGTTATTGATCTTGCTTCCGACAGAATCAGAGAAACCATTGATTCTTCAGCTGACTTGATTTCTCTGCAGAAAACCTGTTCAAATGCATTTCGTATGTATTCAAAGTCAAAACCACTACCTTCGAAAGAGTCTATCAGAAGAGCAAAGGACTTACCTCGTGAAGGATTGCATCCAATCTTCAAAAATATACTAGAAGGTGGTGAATTAAAGGCATTGGCTTTCTCAGAGCGCTTAAAAACATTCAGGCCCAAGCAGACAATACTAGAGGCTGAAGGAGAAACTGCCAAGTCAAAGCATCGACAGGGTCCTAGGCAATGGGTTGATGTAATGAAGAGAAAGAGAGCTGTCCATGAGGAGGTCATTAACTTAGTTCATAAGCAACGCTCTGCCAAGCACGTTGAGGAGGAACTCCCGTTGGAAAACATTTCTCCAAAGGGTAAGAATATGAAAGGAACTCGAGGATTAAAAAAAAGAAAGACTGCAAGTTTCAAAGACGAGGAGTTCTACATAAATTCCGTACCAACAAATCATCATACAGAAGCAGGATTAGCAGTAAAAGGCGATCAAGGTTTTGGGTCCAACAGGTTGGATAATGCTGTTCTGGATCTAGTCGCTGATGATAGTTCTGGCATGCAGAAACATAAATCTGTATACCATTGGGATAAGAGGGGCAAGAAATATGTGAAATTAAACAATGGGGATCGGGTCACAGCCAGTGGAAAGATAAAGACAGAAAGTGGTGCAAAAGTAAAAACTAACAAGACCGGCATATACAAGAAATGGAAAGAACGATCACATAATAAGATCTCTCTCAAAGGAATAAGAAATCAGCGATTTTCGGGAAATAAAAGAAAGTTTGGATCCGGCAAAAACCAGCATTCAGTGCCTAATGCTCATGTGCGCTCTGAAGTTAAAAATCTCGATCAAATTCGGAAGGAACGACAGAAAAAGGCAACTAGAATTCAAACCATGAAGAACCAACCGAAAAGGGGTAAAAAGAAATCTGGTAAAAAGGGAAACCGAGGAAAGGCGAAGTAG

Protein sequence

MIALGFEGSANKIGVGVVTLDGNILSNPRHTYITPPGHGFLPRETAHHHFEHILPLIKSALETAKITPEDIDCLCYTKGPGMGAPLQVSAVAVRVLSQIWNKPIVAVNHCVAHIEMGRIVTGADDPVVLYVSGGNTQVIAYSEGRYRIFGETIDIAVGNCLDRFARVLTLSNDPSPGYNIEQRREKQQKKAKSGGFESLGLSPNVYRGIKRKGYRVPTPIQRKTMPLILSGNDVVAMARTGSGKTAAFLVPMLERLKQHEPQGGVRALILSPTRDLALQTLKFTKELGKFTDLRISLLVGGDSMEAQFEELAQNPDIIIATPGRLMHHLSEVDDMTLRTVEYVVFDEADCLFDMGFAEQLHKILAQLSENRQTLLFSATLPSVLAEFAKAGLRDPQLVRLDVDNKISPDLKLVFFTLRQEEKNAALLYLVREKISSDEQSLIFVSTRHHVEFLNVLFREEGIEPSVCYGEMDQDARKIHISRFRARKTMFLIVTDVAARGIDIPLLDNVINWDFPPKPKIFVHRVGRAARAGRTGAAFSFVTSEDLPNLLDLHLFLSKPIRAAPTEEEVLLDKEGVFSKIDNAIASGETVYGRLPQTVIDLASDRIRETIDSSADLISLQKTCSNAFRMYSKSKPLPSKESIRRAKDLPREGLHPIFKNILEGGELKALAFSERLKTFRPKQTILEAEGETAKSKHRQGPRQWVDVMKRKRAVHEEVINLVHKQRSAKHVEEELPLENISPKGKNMKGTRGLKKRKTASFKDEEFYINSVPTNHHTEAGLAVKGDQGFGSNRLDNAVLDLVADDSSGMQKHKSVYHWDKRGKKYVKLNNGDRVTASGKIKTESGAKVKTNKTGIYKKWKERSHNKISLKGIRNQRFSGNKRKFGSGKNQHSVPNAHVRSEVKNLDQIRKERQKKATRIQTMKNQPKRGKKKSGKKGNRGKAK

Homology

[Close]

BLAST of Cp4.1LG01g09040 vs. ExPASy Swiss-Prot
Match: O49289 (Putative DEAD-box ATP-dependent RNA helicase 29 OS=Arabidopsis thaliana OX=3702 GN=RH29 PE=3 SV=1)

HSP 1 Score: 1060.1 bits (2740), Expect = 1.5e-308
Identity = 553/768 (72.01%), Postives = 644/768 (83.85%), Query Frame = 0


Query: 183 RREKQQKKAKSGGFESLGLSPNVYRGIKRKGYRVPTPIQRKTMPLILSGNDVVAMARTGS 242
           R+EKQ+KK KSGGFESL L PNV+  IK+KGY+VPTPIQRKTMPLILSG DVVAMARTGS
Sbjct: 17  RKEKQKKKGKSGGFESLNLGPNVFNAIKKKGYKVPTPIQRKTMPLILSGVDVVAMARTGS 76

Query: 243 GKTAAFLVPMLERLKQHEPQGGVRALILSPTRDLALQTLKFTKELGKFTDLRISLLVGGD 302
           GKTAAFL+PMLE+LKQH PQGGVRALILSPTRDLA QTLKFTKELGKFTDLR+SLLVGGD
Sbjct: 77  GKTAAFLIPMLEKLKQHVPQGGVRALILSPTRDLAEQTLKFTKELGKFTDLRVSLLVGGD 136

Query: 303 SMEAQFEELAQNPDIIIATPGRLMHHLSEVDDMTLRTVEYVVFDEADCLFDMGFAEQLHK 362
           SME QFEEL + PD+IIATPGRLMH LSEVDDMTLRTVEYVVFDEAD LF MGFAEQLH+
Sbjct: 137 SMEDQFEELTKGPDVIIATPGRLMHLLSEVDDMTLRTVEYVVFDEADSLFGMGFAEQLHQ 196

Query: 363 ILAQLSENRQTLLFSATLPSVLAEFAKAGLRDPQLVRLDVDNKISPDLKLVFFTLRQEEK 422
           IL QLSENRQTLLFSATLPS LAEFAKAGLR+PQLVRLDV+NKISPDLKL F T+R EEK
Sbjct: 197 ILTQLSENRQTLLFSATLPSALAEFAKAGLREPQLVRLDVENKISPDLKLSFLTVRPEEK 256

Query: 423 NAALLYLVREKISSDEQSLIFVSTRHHVEFLNVLFREEGIEPSVCYGEMDQDARKIHISR 482
            +ALLYLVRE ISSD+Q+LIFVST+HHVEF+N LF+ E IEPSVCYG+MDQDARKIH+SR
Sbjct: 257 YSALLYLVREHISSDQQTLIFVSTKHHVEFVNSLFKLENIEPSVCYGDMDQDARKIHVSR 316

Query: 483 FRARKTMFLIVTDVAARGIDIPLLDNVINWDFPPKPKIFVHRVGRAARAGRTGAAFSFVT 542
           FRARKTM LIVTD+AARGIDIPLLDNVINWDFPP+PKIFVHRVGRAARAGRTG A+SFVT
Sbjct: 317 FRARKTMLLIVTDIAARGIDIPLLDNVINWDFPPRPKIFVHRVGRAARAGRTGCAYSFVT 376

Query: 543 SEDLPNLLDLHLFLSKPIRAAPTEEEVLLDKEGVFSKIDNAIASGETVYGRLPQTVIDLA 602
            ED+P +LDLHLFLSKP+R APTE+EVL + E V +K   AI SG TVYGR PQ  IDL 
Sbjct: 377 PEDMPYMLDLHLFLSKPVRPAPTEDEVLKNMEEVMTKTSQAIDSGVTVYGRFPQKTIDLI 436

Query: 603 SDRIRETIDSSADLISLQKTCSNAFRMYSKSKPLPSKESIRRAKDLPREGLHPIFKNILE 662
            +R RE IDSSA+L SL++T + AFR+YSK+KP PSKESIRRAKDLPREGLHPIF++I+E
Sbjct: 437 FNRTREMIDSSAELDSLERTSTKAFRLYSKTKPSPSKESIRRAKDLPREGLHPIFRSIIE 496

Query: 663 GGELKALAFSERLKTFRPKQTILEAEGETAKSKHRQGPR-QWVDVMKRKRAVHEEVINLV 722
            GEL+A++F +++K FRPKQTILEAEGE AKSKH +GP  QWVDVMK+KRA+HEE+IN  
Sbjct: 497 TGELEAMSFFQKIKNFRPKQTILEAEGEVAKSKHVKGPAGQWVDVMKKKRAIHEEIINTR 556

Query: 723 HKQR---SAKHVEEELPLENISPKGKNMKGTR--GLKKRKTASFKDEEFYINSVPTNHHT 782
           H+Q    S  H+E E         G  ++G++  G K++   +FKD+EF+I+S+P NHH+
Sbjct: 557 HQQNQKTSNNHLEMEAEPTTSFVDG-TVEGSKVSGKKRKAQETFKDDEFFISSIPVNHHS 616

Query: 783 EAGLAVKGDQGFGSNRLDNAVLDLVADDSSGMQKHKSVYHWDKRGKKYVKLNNGDRVTAS 842
           EAGL+++G++GFGSNRLD AVLDLVADD  G+++ +S YHWDK+GKKY+KLNNGDRVTAS
Sbjct: 617 EAGLSLRGNEGFGSNRLDAAVLDLVADDGQGIKQQQSNYHWDKKGKKYIKLNNGDRVTAS 676

Query: 843 GKIKTESGAKVKTNKTGIYKKWKERSHNKISL---KGIRNQRFSGNKRKFGSGKNQHSVP 902
           GKIKTESGAK    KTGIYK+W+ERSH K+S          R SG   + G  + Q SVP
Sbjct: 677 GKIKTESGAKATAKKTGIYKRWQERSHKKVSRDSGDADETTRMSGRGGRDGK-RRQGSVP 736

Query: 903 NAHVRSEVKNLDQIRKERQKKATRIQTMKNQPKRGKK--KSGKKGNRG 940
           NAHVRSE+K+LDQ+RKERQ+KA ++  +  Q KRG +  + G +G RG
Sbjct: 737 NAHVRSEIKDLDQVRKERQQKANKVSYL--QSKRGGRGGRGGARGGRG 780

[Close]

BLAST of Cp4.1LG01g09040 vs. ExPASy Swiss-Prot
Match: A2YV85 (DEAD-box ATP-dependent RNA helicase 29 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_028228 PE=2 SV=2)

HSP 1 Score: 987.3 bits (2551), Expect = 1.2e-286
Identity = 513/778 (65.94%), Postives = 624/778 (80.21%), Query Frame = 0


Query: 174 PSPGYNIEQRREKQQKKAKSGGFESLGLSPNVYRGIKRKGYRVPTPIQRKTMPLILSGND 233
           P PG    +     +KKAKSGGFES+GL   VYRG++ KGYRVPTPIQRK MPLIL+G+D
Sbjct: 29  PPPGRPKREGEGASKKKAKSGGFESMGLCEEVYRGVRHKGYRVPTPIQRKAMPLILAGHD 88

Query: 234 VVAMARTGSGKTAAFLVPMLERLKQHEPQGGVRALILSPTRDLALQTLKFTKELGKFTDL 293
           + AMARTGSGKTAAFLVPM++RL++H+   G+RALILSPTRDLA QTLKF ++LGKFTDL
Sbjct: 89  IAAMARTGSGKTAAFLVPMIQRLRRHDAGAGIRALILSPTRDLATQTLKFAQQLGKFTDL 148

Query: 294 RISLLVGGDSMEAQFEELAQNPDIIIATPGRLMHHLSEVDDMTLRTVEYVVFDEADCLFD 353
           +ISL+VGGDSME+QFEELA+NPDIIIATPGRL+HHL+EV+D+ LRTVEYVVFDEAD LF 
Sbjct: 149 KISLIVGGDSMESQFEELAENPDIIIATPGRLVHHLAEVEDLNLRTVEYVVFDEADSLFS 208

Query: 354 MGFAEQLHKILAQLSENRQTLLFSATLPSVLAEFAKAGLRDPQLVRLDVDNKISPDLKLV 413
           +G  +QLH IL +LS+ RQTLLFSATLP  LA+FAKAGLRDPQ+VRLD+D KISPDLKL 
Sbjct: 209 LGLIQQLHDILHKLSDTRQTLLFSATLPQALADFAKAGLRDPQIVRLDLDKKISPDLKLA 268

Query: 414 FFTLRQEEKNAALLYLVREKISSDEQSLIFVSTRHHVEFLNVLFREEGIEPSVCYGEMDQ 473
           FFTLRQEEK AALLYLVRE+ISS+EQ++IFVST+HHVEFLN+LFREEG+EPS+ YG MDQ
Sbjct: 269 FFTLRQEEKLAALLYLVRERISSEEQTIIFVSTKHHVEFLNILFREEGLEPSLSYGAMDQ 328

Query: 474 DARKIHISRFRARKTMFLIVTDVAARGIDIPLLDNVINWDFPPKPKIFVHRVGRAARAGR 533
           +AR IHIS+FRARKTM LIVTDVAARG+DIPLLDNV+NWDFP KPK+FVHRVGR AR GR
Sbjct: 329 EARNIHISKFRARKTMILIVTDVAARGLDIPLLDNVVNWDFPAKPKLFVHRVGRVARQGR 388

Query: 534 TGAAFSFVTSEDLPNLLDLHLFLSKPIRAAPTEEEVLLDKEGVFSKIDNAIASGETVYGR 593
           +G A++FVTSED+  LLDLHLFLSKP+R APTEEE+L D EG+  KID A+A+GETVYGR
Sbjct: 389 SGTAYTFVTSEDMAYLLDLHLFLSKPLRPAPTEEELLKDMEGMNLKIDRALANGETVYGR 448

Query: 594 LPQTVIDLASDRIRETIDSSADLISLQKTCSNAFRMYSKSKPLPSKESIRRAKDLPREGL 653
            PQT+IDL SD IRE I+   DLI+L+K C+NAF +Y K++P+PS ESIRR KDLPREGL
Sbjct: 449 FPQTIIDLVSDGIREVINGCTDLIALEKPCTNAFHLYLKTRPMPSTESIRRVKDLPREGL 508

Query: 654 HPIFKNILEGGELKALAFSERLKTFRPKQTILEAEGETAKSKHRQGPRQWVDVMKRKRAV 713
           HPIF+++L   EL ALAFSERLK+FRPKQTILEAEGE A+     G  QW+DVMK+KR V
Sbjct: 509 HPIFRDVLGSDELSALAFSERLKSFRPKQTILEAEGEAAR-----GSNQWLDVMKKKREV 568

Query: 714 HEEVINLVHKQRSAKHVEEELPLENISP-KGKNMKGTRGLKKRKTASFKDEEFYINSVPT 773
           HE +INLVH++ +  H  +E  +ENIS  + K++ G     KRK  SF+DEE+YI+SVP 
Sbjct: 569 HEGIINLVHQKNNVDHEPKEELVENISNWERKDVCG----NKRKLQSFRDEEYYISSVPQ 628

Query: 774 NHHTEAGLAVKGDQGFGSNRLDNAVLDLVADDSSGMQKHKSVYHWDKRGKKYVKLNNGDR 833
           N H EAGL+V+ ++GF  NRLD AVLDLV D++SGMQ  K+ YHW K   K+VKLN+GDR
Sbjct: 629 NQHLEAGLSVRANEGFVENRLDAAVLDLVDDETSGMQAQKTRYHWKK--NKFVKLNSGDR 688

Query: 834 VTASGKIKTESGAKVKTNKTGIYKKWKERSHNKI----SLKGIRNQRFS-------GNKR 893
           VTA+GKIKTESGAK+K  KTGIYKKW++++H  I       G   +  S       GN++
Sbjct: 689 VTATGKIKTESGAKLKPTKTGIYKKWQQKTHRSIDTGRKYGGFAEEGASTTGSHQRGNRK 748

Query: 894 KFGSGKNQHSVPNAHVRSEVKNLDQIRKERQKKATRIQTMKNQ-PKRGKKKSGKKGNR 939
              +G+ +  +PNA V SE++N +QI+K RQ+KA  I  MKN+  K  K +  +K NR
Sbjct: 749 HTAAGRGRRYIPNADVPSEIRNPEQIQKSRQQKAMDIARMKNRSTKESKFQKFQKNNR 795

[Close]

BLAST of Cp4.1LG01g09040 vs. ExPASy Swiss-Prot
Match: A3BT52 (DEAD-box ATP-dependent RNA helicase 29 OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g0416100 PE=2 SV=2)

HSP 1 Score: 983.8 bits (2542), Expect = 1.4e-285
Identity = 511/778 (65.68%), Postives = 623/778 (80.08%), Query Frame = 0


Query: 174 PSPGYNIEQRREKQQKKAKSGGFESLGLSPNVYRGIKRKGYRVPTPIQRKTMPLILSGND 233
           P PG    +     ++KAKSGGFES+GL   VYRG++ KGYRVPTPIQRK MPLIL+G+D
Sbjct: 29  PLPGRPKREGEGASKRKAKSGGFESMGLCEEVYRGVRHKGYRVPTPIQRKAMPLILAGHD 88

Query: 234 VVAMARTGSGKTAAFLVPMLERLKQHEPQGGVRALILSPTRDLALQTLKFTKELGKFTDL 293
           + AMARTGSGKTAAFLVPM++RL++H+   G+RALILSPTRDLA QTLKF ++LGKFTDL
Sbjct: 89  IAAMARTGSGKTAAFLVPMIQRLRRHDAGAGIRALILSPTRDLATQTLKFAQQLGKFTDL 148

Query: 294 RISLLVGGDSMEAQFEELAQNPDIIIATPGRLMHHLSEVDDMTLRTVEYVVFDEADCLFD 353
           +ISL+VGGDSME+QFEELA+NPDIIIATPGRL+HHL+EV+D+ LRTVEYVVFDEAD LF 
Sbjct: 149 KISLIVGGDSMESQFEELAENPDIIIATPGRLVHHLAEVEDLNLRTVEYVVFDEADSLFS 208

Query: 354 MGFAEQLHKILAQLSENRQTLLFSATLPSVLAEFAKAGLRDPQLVRLDVDNKISPDLKLV 413
           +G  +QLH IL +LS+ RQTLLFSATLP  LA+FAKAGLRDPQ+VRLD+D KISPDLKL 
Sbjct: 209 LGLIQQLHDILHKLSDTRQTLLFSATLPQALADFAKAGLRDPQIVRLDLDKKISPDLKLA 268

Query: 414 FFTLRQEEKNAALLYLVREKISSDEQSLIFVSTRHHVEFLNVLFREEGIEPSVCYGEMDQ 473
           FFTLRQEEK AALLYLVRE+ISS+EQ++IFVST+HHVEFLN+LFREEG+EPS+ YG MDQ
Sbjct: 269 FFTLRQEEKLAALLYLVRERISSEEQTIIFVSTKHHVEFLNILFREEGLEPSLSYGAMDQ 328

Query: 474 DARKIHISRFRARKTMFLIVTDVAARGIDIPLLDNVINWDFPPKPKIFVHRVGRAARAGR 533
           +AR IHIS+FRARKTM LIVTDVAARG+DIPLLDNV+NWDFP KPK+FVHRVGR AR GR
Sbjct: 329 EARNIHISKFRARKTMILIVTDVAARGLDIPLLDNVVNWDFPAKPKLFVHRVGRVARQGR 388

Query: 534 TGAAFSFVTSEDLPNLLDLHLFLSKPIRAAPTEEEVLLDKEGVFSKIDNAIASGETVYGR 593
           +G A++FVTSED+  LLDLHLFLSKP+R APTEEE+L D EG+  KID A+A+GETVYGR
Sbjct: 389 SGTAYTFVTSEDMAYLLDLHLFLSKPLRPAPTEEELLKDMEGMNLKIDRALANGETVYGR 448

Query: 594 LPQTVIDLASDRIRETIDSSADLISLQKTCSNAFRMYSKSKPLPSKESIRRAKDLPREGL 653
            PQT+IDL SD I+E I+   DLI+L+K C+NAF +Y K++P+PS ESIRR KDLPREGL
Sbjct: 449 FPQTIIDLVSDGIKEVINGCTDLIALEKPCTNAFHLYLKTRPMPSTESIRRVKDLPREGL 508

Query: 654 HPIFKNILEGGELKALAFSERLKTFRPKQTILEAEGETAKSKHRQGPRQWVDVMKRKRAV 713
           HPIF+++L   EL ALAFSERLK+FRPKQTILEAEGE A+     G  QW+DVMK+KR V
Sbjct: 509 HPIFRDVLGSDELSALAFSERLKSFRPKQTILEAEGEAAR-----GSNQWLDVMKKKREV 568

Query: 714 HEEVINLVHKQRSAKHVEEELPLENISP-KGKNMKGTRGLKKRKTASFKDEEFYINSVPT 773
           HE +INLVH++ +  H  +E  +ENIS  + K++ G     KRK  SF+DEE+YI+SVP 
Sbjct: 569 HEGIINLVHQKNNVDHEPKEELVENISNWERKDVCG----NKRKLQSFRDEEYYISSVPQ 628

Query: 774 NHHTEAGLAVKGDQGFGSNRLDNAVLDLVADDSSGMQKHKSVYHWDKRGKKYVKLNNGDR 833
           N H EAGL+V+ ++GF  NRLD AVLDLV D++SGMQ  K+ YHW K   K+VKLN+GDR
Sbjct: 629 NQHLEAGLSVRANEGFVENRLDAAVLDLVDDETSGMQAQKTRYHWKK--NKFVKLNSGDR 688

Query: 834 VTASGKIKTESGAKVKTNKTGIYKKWKERSHNKI----SLKGIRNQRFS-------GNKR 893
           VTA+GKIKTESGAK+K  KTGIYKKW++++H  I       G   +  S       GN++
Sbjct: 689 VTATGKIKTESGAKLKPTKTGIYKKWQQKTHRSIDTGRKFGGFAEEGASTTGSHQRGNRK 748

Query: 894 KFGSGKNQHSVPNAHVRSEVKNLDQIRKERQKKATRIQTMKNQ-PKRGKKKSGKKGNR 939
               G+ +  +PNA V SE++N +QI+K RQ+KA  I  MKN+  K  K +  +K NR
Sbjct: 749 HTAVGRGRRYIPNADVPSEIRNPEQIQKSRQQKAMDIARMKNRSTKESKFQKFQKNNR 795

[Close]

BLAST of Cp4.1LG01g09040 vs. ExPASy Swiss-Prot
Match: Q8K4L0 (ATP-dependent RNA helicase DDX54 OS=Mus musculus OX=10090 GN=Ddx54 PE=1 SV=1)

HSP 1 Score: 587.8 bits (1514), Expect = 2.2e-166
Identity = 344/762 (45.14%), Postives = 486/762 (63.78%), Query Frame = 0


Query: 181 EQRREKQQKKAKSGGFESLGLSPNVYRGIKRKGYRVPTPIQRKTMPLILSGNDVVAMART 240
           E  R + +KK KSGGF+S+GLS  V++GI +KGY+VPTPIQRKT+P+IL G DVVAMART
Sbjct: 82  EMVRAQNKKKKKSGGFQSMGLSYPVFKGIMKKGYKVPTPIQRKTIPVILDGKDVVAMART 141

Query: 241 GSGKTAAFLVPMLERLKQHEPQGGVRALILSPTRDLALQTLKFTKELGKFTDLRISLLVG 300
           GSGKTA FL+PM ERLK    Q G RALILSPTR+LALQT+KFTKELGKFT L+ +L++G
Sbjct: 142 GSGKTACFLLPMFERLKARSAQTGARALILSPTRELALQTMKFTKELGKFTGLKTALILG 201

Query: 301 GDSMEAQFEELAQNPDIIIATPGRLMHHLSEVDDMTLRTVEYVVFDEADCLFDMGFAEQL 360
           GD ME QF  L +NPDIIIATPGRL+H   E+ ++ L++VEYVVFDEAD LF+MGFAEQL
Sbjct: 202 GDKMEDQFAALHENPDIIIATPGRLVHVAVEM-NLKLQSVEYVVFDEADRLFEMGFAEQL 261

Query: 361 HKILAQLSENRQTLLFSATLPSVLAEFAKAGLRDPQLVRLDVDNKISPDLKLVFFTLRQE 420
            +I+ +L    QT+LFSATLP +L EFA+AGL +P L+RLDVD+K++  LK  F  +R++
Sbjct: 262 QEIIGRLPGGHQTVLFSATLPKLLVEFARAGLTEPVLIRLDVDSKLNEQLKTSFLLVRED 321

Query: 421 EKNAALLYLVREKISSDEQSLIFVSTRHHVEFLNVLFREEGIEPSVCYGEMDQDARKIHI 480
            K A LLYL++  +   +Q+++FV+T+HH E+L  L   +G+  +  Y  +DQ ARKI++
Sbjct: 322 TKAAVLLYLLQNVVRPQDQTVVFVATKHHAEYLTELLMGQGVSCAHIYSALDQTARKINL 381

Query: 481 SRFRARKTMFLIVTDVAARGIDIPLLDNVINWDFPPKPKIFVHRVGRAARAGRTGAAFSF 540
           ++F   K   LIVTD+AARG+DIPLLDNVIN+ FP K K+F+HRVGR ARAGR+G A+S 
Sbjct: 382 AKFTHNKCSTLIVTDLAARGLDIPLLDNVINYSFPAKGKLFLHRVGRVARAGRSGTAYSL 441

Query: 541 VTSEDLPNLLDLHLFLSKPIR-AAPTEEEVLLDKEGVFSKIDNAIASGETVYGRLPQTVI 600
           V  +++P LLDLHLFL + +  A P EE  + D  G            + V GR+PQ+V+
Sbjct: 442 VAPDEVPYLLDLHLFLGRSVTLARPCEEPSVADAVG-----------RDGVLGRVPQSVV 501

Query: 601 DLASDRIRETIDSSADLISLQKTCSNAFRMYSKSKPLPSKESIRRAK--DLPREGLHPIF 660
           D     ++  + +S DL  L +  +NA + Y +S+P PS ESI+RAK  DL   GLHP+F
Sbjct: 502 DDEDSSLQTAMGASLDLQGLHRVANNAQQQYVRSRPAPSPESIKRAKELDLAELGLHPLF 561

Query: 661 KNILEGGELKALAFSERLKTFRPKQTILE--AEGETAKSK----HRQGPRQWVDVMKRKR 720
            +  E GEL+ L   + +K +R + TI E  A  +   S+     RQ  R+ V   +++R
Sbjct: 562 SSCFEEGELQRLRLVDSIKNYRTRTTIFEINASSKDPSSQMMRAKRQRDRKAVASFQQRR 621

Query: 721 AVHEEVINLVHKQRSAKHVEEELPLENISPKGKNMKG--------TRGLKKRKTAS-FKD 780
              +E       QR     EEE  +E +      + G        ++G K+R+  +  +D
Sbjct: 622 QERQEGPADPAPQRELPQEEEEEMVETVEGVFTEVVGQKRPRPGPSQGAKRRRMETRQRD 681

Query: 781 EEFYINSVPTNHHTEAGLAVKGDQGFGSNRLDNAVLDLVADDSSGMQKHKSVYHWDKRGK 840
           +EFY+   P +  +E GL+V G  G    ++  AVLDL+ D++  M + +    WD++ K
Sbjct: 682 QEFYVPYRPKDFDSERGLSVSGAGGAFEQQVAGAVLDLMGDEAQNMSRGQQQLKWDRKKK 741

Query: 841 KYVKLNNGDRVTASGKIKTESGAKVKTN-KTGIYKKWKER---SHNKISLKGIRNQRFSG 900
           ++V  +  +      KIKTESG  + ++ K  +Y+KWK++          +G  NQR  G
Sbjct: 742 RFVGQSGQE---DKKKIKTESGRFISSSYKRDLYQKWKQKQKIDDRDSEEEGPSNQRGPG 801

Query: 901 NKRKFGSGKNQ-------HSVPNAHVRSEVKNLDQIRKERQK 914
            +R    G++Q        SVP   +RSE+K  +QI K+R++
Sbjct: 802 PRRGGKRGRSQGTSQPRASSVPAGRMRSELKTKEQILKQRRQ 828

[Close]

BLAST of Cp4.1LG01g09040 vs. ExPASy Swiss-Prot
Match: Q8TDD1 (ATP-dependent RNA helicase DDX54 OS=Homo sapiens OX=9606 GN=DDX54 PE=1 SV=2)

HSP 1 Score: 572.8 bits (1475), Expect = 7.2e-162
Identity = 333/773 (43.08%), Postives = 478/773 (61.84%), Query Frame = 0


Query: 181 EQRREKQQKKAKSGGFESLGLSPNVYRGIKRKGYRVPTPIQRKTMPLILSGNDVVAMART 240
           E  R + +KK KSGGF+S+GLS  V++GI +KGY+VPTPIQRKT+P+IL G DVVAMART
Sbjct: 83  EMVRAQNKKKKKSGGFQSMGLSYPVFKGIMKKGYKVPTPIQRKTIPVILDGKDVVAMART 142

Query: 241 GSGKTAAFLVPMLERLKQHEPQGGVRALILSPTRDLALQTLKFTKELGKFTDLRISLLVG 300
           GSGKTA FL+PM ERLK H  Q G RALILSPTR+LALQTLKFTKELGKFT L+ +L++G
Sbjct: 143 GSGKTACFLLPMFERLKTHSAQTGARALILSPTRELALQTLKFTKELGKFTGLKTALILG 202

Query: 301 GDSMEAQFEELAQNPDIIIATPGRLMHHLSEVDDMTLRTVEYVVFDEADCLFDMGFAEQL 360
           GD ME QF  L +NPDIIIATPGRL+H   E+  + L++VEYVVFDEAD LF+MGFAEQL
Sbjct: 203 GDRMEDQFAALHENPDIIIATPGRLVHVAVEM-SLKLQSVEYVVFDEADRLFEMGFAEQL 262

Query: 361 HKILAQLSENRQTLLFSATLPSVLAEFAKAGLRDPQLVRLDVDNKISPDLKLVFFTLRQE 420
            +I+A+L    QT+LFSATLP +L EFA+AGL +P L+RLDVD K++  LK  FF +R++
Sbjct: 263 QEIIARLPGGHQTVLFSATLPKLLVEFARAGLTEPVLIRLDVDTKLNEQLKTSFFLVRED 322

Query: 421 EKNAALLYLVREKISSDEQSLIFVSTRHHVEFLNVLFREEGIEPSVCYGEMDQDARKIHI 480
            K A LL+L+   +   +Q+++FV+T+HH E+L  L   + +  +  Y  +D  ARKI++
Sbjct: 323 TKAAVLLHLLHNVVRPQDQTVVFVATKHHAEYLTELLTTQRVSCAHIYSALDPTARKINL 382

Query: 481 SRFRARKTMFLIVTDVAARGIDIPLLDNVINWDFPPKPKIFVHRVGRAARAGRTGAAFSF 540
           ++F   K   LIVTD+AARG+DIPLLDNVIN+ FP K K+F+HRVGR ARAGR+G A+S 
Sbjct: 383 AKFTLGKCSTLIVTDLAARGLDIPLLDNVINYSFPAKGKLFLHRVGRVARAGRSGTAYSL 442

Query: 541 VTSEDLPNLLDLHLFLSKPIRAAPTEEEVLLDKEGVFSKIDNAIASGETVYGRLPQTVID 600
           V  +++P LLDLHLFL + +  A   +E             + +A  + + GR+PQ+V+D
Sbjct: 443 VAPDEIPYLLDLHLFLGRSLTLARPLKE------------PSGVAGVDGMLGRVPQSVVD 502

Query: 601 LASDRIRETIDSSADLISLQKTCSNAFRMYSKSKPLPSKESIRRAK--DLPREGLHPIFK 660
                ++ T+++S +L  L +   NA + Y +S+P PS ESI+RAK  DL   GLHP+F 
Sbjct: 503 EEDSGLQSTLEASLELRGLARVADNAQQQYVRSRPAPSPESIKRAKEMDLVGLGLHPLFS 562

Query: 661 NILEGGELKALAFSERLKTFRPKQTILE---------------------------AEGET 720
           +  E  EL+ L   + +K +R + TI E                            +G+ 
Sbjct: 563 SRFEEEELQRLRLVDSIKNYRSRATIFEINASSRDLCSQVMRAKRQKDRKAIARFQQGQQ 622

Query: 721 AKSKHRQGPRQWVDVMKRKRAVHEEVINLVHKQRSAKHVEEELPLENISPKGKNMKGTRG 780
            + + ++GP   V     + A+ E+      ++ + + V E++  E +  K +     RG
Sbjct: 623 GRQEQQEGP---VGPAPSRPALQEKQPEKEEEEEAGESV-EDIFSEVVGRKRQRSGPNRG 682

Query: 781 LKKRK-TASFKDEEFYINSVPTNHHTEAGLAVKGDQGFGSNRLDNAVLDLVADDSSGMQK 840
            K+R+  A  +D+EFYI   P +  +E GL++ G+ G    +   AVLDL+ D++  + +
Sbjct: 683 AKRRREEARQRDQEFYIPYRPKDFDSERGLSISGEGGAFEQQAAGAVLDLMGDEAQNLTR 742

Query: 841 HKSVYHWDKRGKKYVKLNNGDRVTASGKIKTESGAKVKTN-KTGIYKKWK------ERSH 900
            +    WD++ K++V  +  +      KIKTESG  + ++ K  +Y+KWK      +R  
Sbjct: 743 GRQQLKWDRKKKRFVGQSGQE---DKKKIKTESGRYISSSYKRDLYQKWKQKQKIDDRDS 802

Query: 901 NKISLKGIRNQRFSGNKRKFGSGKNQHSVPN---AHVRSEVKNLDQIRKERQK 914
           ++      R     G KR  G G ++   P      VR E+K   QI K+R++
Sbjct: 803 DEEGASDRRGPERRGGKRDRGQGASRPHAPGTPAGRVRPELKTKQQILKQRRR 835

[Close]

BLAST of Cp4.1LG01g09040 vs. NCBI nr
Match: XP_023537507.1 (putative DEAD-box ATP-dependent RNA helicase 29 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1462 bits (3784), Expect = 0.0
Identity = 759/774 (98.06%), Postives = 760/774 (98.19%), Query Frame = 0


Query: 182 QRREKQQKKAKSGGFESLGLSPNVYRGIKRKGYRVPTPIQRKTMPLILSGNDVVAMARTG 241
           +RREKQQKKAKSGGFESLGLSPNVYRGIKRKGYRVPTPIQRKTMPLILSGNDVVAMARTG
Sbjct: 17  KRREKQQKKAKSGGFESLGLSPNVYRGIKRKGYRVPTPIQRKTMPLILSGNDVVAMARTG 76

Query: 242 SGKTAAFLVPMLERLKQHEPQGGVRALILSPTRDLALQTLKFTKELGKFTDLRISLLVGG 301
           SGKTAAFLVPMLERLKQHEPQGGVRALILSPTRDLALQTLKFTKELGKFTDLRISLLVGG
Sbjct: 77  SGKTAAFLVPMLERLKQHEPQGGVRALILSPTRDLALQTLKFTKELGKFTDLRISLLVGG 136

Query: 302 DSMEAQFEELAQNPDIIIATPGRLMHHLSEVDDMTLRTVEYVVFDEADCLFDMGFAEQLH 361
           DSMEAQFEELAQNPDIIIATPGRLMHHLSEVDDMTLRTVEYVVFDEADCLFDMGFAEQLH
Sbjct: 137 DSMEAQFEELAQNPDIIIATPGRLMHHLSEVDDMTLRTVEYVVFDEADCLFDMGFAEQLH 196

Query: 362 KILAQLSENRQTLLFSATLPSVLAEFAKAGLRDPQLVRLDVDNKISPDLKLVFFTLRQEE 421
           KILAQLSENRQTLLFSATLPSVLAEFAKAGLRDPQLVRLDVDNKISPDLKLVFFTLRQEE
Sbjct: 197 KILAQLSENRQTLLFSATLPSVLAEFAKAGLRDPQLVRLDVDNKISPDLKLVFFTLRQEE 256

Query: 422 KNAALLYLVREKISSDEQSLIFVSTRHHVEFLNVLFREEGIEPSVCYGEMDQDARKIHIS 481
           KNAALLYLVREKISSDEQSLIFVSTRHHVEFLNVLFREEGIEPSVCYGEMDQDARKIHIS
Sbjct: 257 KNAALLYLVREKISSDEQSLIFVSTRHHVEFLNVLFREEGIEPSVCYGEMDQDARKIHIS 316

Query: 482 RFRARKTMFLIVTDVAARGIDIPLLDNVINWDFPPKPKIFVHRVGRAARAGRTGAAFSFV 541
           RFRARKTMFLIVTDVAARGIDIPLLDNVINWDFPPKPKIFVHRVGRAARAGRTGAAFSFV
Sbjct: 317 RFRARKTMFLIVTDVAARGIDIPLLDNVINWDFPPKPKIFVHRVGRAARAGRTGAAFSFV 376

Query: 542 TSEDLPNLLDLHLFLSKPIRAAPTEEEVLLDKEGVFSKIDNAIASGETVYGRLPQTVIDL 601
           TSEDLPNLLDLHLFLSKPIRAAPTEEEVLLDKEGVFSKIDNAIASGETVYGRLPQTVIDL
Sbjct: 377 TSEDLPNLLDLHLFLSKPIRAAPTEEEVLLDKEGVFSKIDNAIASGETVYGRLPQTVIDL 436

Query: 602 ASDRIRETIDSSADLISLQKTCSNAFRMYSKSKPLPSKESIRRAKDLPREGLHPIFKNIL 661
           ASDRIRETIDSSADLISLQKTCSNAFRMYSKSKPLPSKESIRRAKDLPREGLHPIFKNIL
Sbjct: 437 ASDRIRETIDSSADLISLQKTCSNAFRMYSKSKPLPSKESIRRAKDLPREGLHPIFKNIL 496

Query: 662 EGGELKALAFSERLKTFRPKQTILEAEGETAKSKHRQGPRQWVDVMKRKRAVHEEVINLV 721
           EGGELKALAFSERLKTFRPKQTILEAEGETAKSKHRQGPRQWVDVMKRKRAVHEEVINLV
Sbjct: 497 EGGELKALAFSERLKTFRPKQTILEAEGETAKSKHRQGPRQWVDVMKRKRAVHEEVINLV 556

Query: 722 HKQRSAKHVEEELPLENISPKGKNMKGTRGLKKRKTASFKDEEFYINSVPTNHHTEAGLA 781
           HKQRSAKHVEEELPLENISPKGKNMKGTRGLKKRKTASFKDEEFYINSVPTNHHTEAGLA
Sbjct: 557 HKQRSAKHVEEELPLENISPKGKNMKGTRGLKKRKTASFKDEEFYINSVPTNHHTEAGLA 616

Query: 782 VKGDQGFGSNRLDNAVLDLVADDSSGMQKHKSVYHWDKRGKKYVKLNNGDRVTASGKIKT 841
           VKGDQGFGSNRLDNAVLDLVADDSSGMQKHKSVYHWDKRGKKYVKLNNGDRVTASGKIKT
Sbjct: 617 VKGDQGFGSNRLDNAVLDLVADDSSGMQKHKSVYHWDKRGKKYVKLNNGDRVTASGKIKT 676

Query: 842 ESGAKVKTNKTGIYKKWKERSHNKISLKGIR-------------NQRFSGNKRKFGSGKN 901
           ESGAKVKTNKTGIYKKWKERSHNKISLKGI              NQRFSGNKRKFGSGKN
Sbjct: 677 ESGAKVKTNKTGIYKKWKERSHNKISLKGISLGDHDGEAMNRAGNQRFSGNKRKFGSGKN 736

Query: 902 QHSVPNAHVRSEVKNLDQIRKERQKKATRIQTMKNQPKRGKKKSGKKGNRGKAK 942
           QHSVPNAHVRSEVKNLDQIRKERQKKATRIQTMKNQPKRGKKKSGKKGNRGKAK
Sbjct: 737 QHSVPNAHVRSEVKNLDQIRKERQKKATRIQTMKNQPKRGKKKSGKKGNRGKAK 790

[Close]

BLAST of Cp4.1LG01g09040 vs. NCBI nr
Match: XP_023537498.1 (putative DEAD-box ATP-dependent RNA helicase 29 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1461 bits (3782), Expect = 0.0
Identity = 759/776 (97.81%), Postives = 760/776 (97.94%), Query Frame = 0


Query: 182 QRREKQQKKAKSGGFESLGLSPNVYRGIKRKGYRVPTPIQRKTMPLILSGNDVVAMARTG 241
           +RREKQQKKAKSGGFESLGLSPNVYRGIKRKGYRVPTPIQRKTMPLILSGNDVVAMARTG
Sbjct: 17  KRREKQQKKAKSGGFESLGLSPNVYRGIKRKGYRVPTPIQRKTMPLILSGNDVVAMARTG 76

Query: 242 SGKTAAFLVPMLERLKQHEPQGGVRALILSPTRDLALQTLKFTKELGKFTDLRISLLVGG 301
           SGKTAAFLVPMLERLKQHEPQGGVRALILSPTRDLALQTLKFTKELGKFTDLRISLLVGG
Sbjct: 77  SGKTAAFLVPMLERLKQHEPQGGVRALILSPTRDLALQTLKFTKELGKFTDLRISLLVGG 136

Query: 302 DSMEAQFEELAQNPDIIIATPGRLMHHLSEVDDMTLRTVEYVVFDEADCLFDMGFAEQLH 361
           DSMEAQFEELAQNPDIIIATPGRLMHHLSEVDDMTLRTVEYVVFDEADCLFDMGFAEQLH
Sbjct: 137 DSMEAQFEELAQNPDIIIATPGRLMHHLSEVDDMTLRTVEYVVFDEADCLFDMGFAEQLH 196

Query: 362 KILAQLSENRQTLLFSATLPSVLAEFAKAGLRDPQLVRLDVDNKISPDLKLVFFTLRQEE 421
           KILAQLSENRQTLLFSATLPSVLAEFAKAGLRDPQLVRLDVDNKISPDLKLVFFTLRQEE
Sbjct: 197 KILAQLSENRQTLLFSATLPSVLAEFAKAGLRDPQLVRLDVDNKISPDLKLVFFTLRQEE 256

Query: 422 KNAALLYLVREKISSDEQSLIFVSTRHHVEFLNVLFREEGIEPSVCYGEMDQDARKIHIS 481
           KNAALLYLVREKISSDEQSLIFVSTRHHVEFLNVLFREEGIEPSVCYGEMDQDARKIHIS
Sbjct: 257 KNAALLYLVREKISSDEQSLIFVSTRHHVEFLNVLFREEGIEPSVCYGEMDQDARKIHIS 316

Query: 482 RFRARKTMFLIVTDVAARGIDIPLLDNVINWDFPPKPKIFVHRVGRAARAGRTGAAFSFV 541
           RFRARKTMFLIVTDVAARGIDIPLLDNVINWDFPPKPKIFVHRVGRAARAGRTGAAFSFV
Sbjct: 317 RFRARKTMFLIVTDVAARGIDIPLLDNVINWDFPPKPKIFVHRVGRAARAGRTGAAFSFV 376

Query: 542 TSEDLPNLLDLHLFLSKPIRAAPTEEEVLLDKEGVFSKIDNAIASGETVYGRLPQTVIDL 601
           TSEDLPNLLDLHLFLSKPIRAAPTEEEVLLDKEGVFSKIDNAIASGETVYGRLPQTVIDL
Sbjct: 377 TSEDLPNLLDLHLFLSKPIRAAPTEEEVLLDKEGVFSKIDNAIASGETVYGRLPQTVIDL 436

Query: 602 ASDRIRETIDSSADLISLQKTCSNAFRMYSKSKPLPSKESIRRAKDLPREGLHPIFKNIL 661
           ASDRIRETIDSSADLISLQKTCSNAFRMYSKSKPLPSKESIRRAKDLPREGLHPIFKNIL
Sbjct: 437 ASDRIRETIDSSADLISLQKTCSNAFRMYSKSKPLPSKESIRRAKDLPREGLHPIFKNIL 496

Query: 662 EGGELKALAFSERLKTFRPKQTILEAEGETAKSKHRQGPRQWVDVMKRKRAVHEEVINLV 721
           EGGELKALAFSERLKTFRPKQTILEAEGETAKSKHRQGPRQWVDVMKRKRAVHEEVINLV
Sbjct: 497 EGGELKALAFSERLKTFRPKQTILEAEGETAKSKHRQGPRQWVDVMKRKRAVHEEVINLV 556

Query: 722 HKQRSAKHVEEELPLENISPKGKNMKGTRGLKKRKTASFKDEEFYINSVPTNHHTEAGLA 781
           HKQRSAKHVEEELPLENISPKGKNMKGTRGLKKRKTASFKDEEFYINSVPTNHHTEAGLA
Sbjct: 557 HKQRSAKHVEEELPLENISPKGKNMKGTRGLKKRKTASFKDEEFYINSVPTNHHTEAGLA 616

Query: 782 VKGDQGFGSNRLDNAVLDLVADDSSGMQKHKSVYHWDKRGKKYVKLNNGDRVTASGKIKT 841
           VKGDQGFGSNRLDNAVLDLVADDSSGMQKHKSVYHWDKRGKKYVKLNNGDRVTASGKIKT
Sbjct: 617 VKGDQGFGSNRLDNAVLDLVADDSSGMQKHKSVYHWDKRGKKYVKLNNGDRVTASGKIKT 676

Query: 842 ESGAKVKTNKTGIYKKWKERSHNKISLKGIR---------------NQRFSGNKRKFGSG 901
           ESGAKVKTNKTGIYKKWKERSHNKISLKGI                NQRFSGNKRKFGSG
Sbjct: 677 ESGAKVKTNKTGIYKKWKERSHNKISLKGISLGDHDGEAMNRAGAGNQRFSGNKRKFGSG 736

Query: 902 KNQHSVPNAHVRSEVKNLDQIRKERQKKATRIQTMKNQPKRGKKKSGKKGNRGKAK 942
           KNQHSVPNAHVRSEVKNLDQIRKERQKKATRIQTMKNQPKRGKKKSGKKGNRGKAK
Sbjct: 737 KNQHSVPNAHVRSEVKNLDQIRKERQKKATRIQTMKNQPKRGKKKSGKKGNRGKAK 792

[Close]

BLAST of Cp4.1LG01g09040 vs. NCBI nr
Match: KAG7031303.1 (putative DEAD-box ATP-dependent RNA helicase 29 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1459 bits (3777), Expect = 0.0
Identity = 754/763 (98.82%), Postives = 759/763 (99.48%), Query Frame = 0


Query: 182 QRREKQQKKAKSGGFESLGLSPNVYRGIKRKGYRVPTPIQRKTMPLILSGNDVVAMARTG 241
           +RREKQQKKAKSGGFESLGLSPNVYRGIKRKGYRVPTPIQRKTMPLILSGNDVVAMARTG
Sbjct: 17  KRREKQQKKAKSGGFESLGLSPNVYRGIKRKGYRVPTPIQRKTMPLILSGNDVVAMARTG 76

Query: 242 SGKTAAFLVPMLERLKQHEPQGGVRALILSPTRDLALQTLKFTKELGKFTDLRISLLVGG 301
           SGKTAAFLVPMLERLKQHEPQGGVRALILSPTRDLALQTLKFTKELGKFTDLRISLLVGG
Sbjct: 77  SGKTAAFLVPMLERLKQHEPQGGVRALILSPTRDLALQTLKFTKELGKFTDLRISLLVGG 136

Query: 302 DSMEAQFEELAQNPDIIIATPGRLMHHLSEVDDMTLRTVEYVVFDEADCLFDMGFAEQLH 361
           DSME QFEELAQNPDIIIATPGRLMHHLSEVDDMTLRTVEYVVFDEADCLFDMGFAEQLH
Sbjct: 137 DSMETQFEELAQNPDIIIATPGRLMHHLSEVDDMTLRTVEYVVFDEADCLFDMGFAEQLH 196

Query: 362 KILAQLSENRQTLLFSATLPSVLAEFAKAGLRDPQLVRLDVDNKISPDLKLVFFTLRQEE 421
           KILAQLSENRQTLLFSATLPSVLAEFAKAGLRDPQLVRLDVDNKISPDLKLVFFTLRQEE
Sbjct: 197 KILAQLSENRQTLLFSATLPSVLAEFAKAGLRDPQLVRLDVDNKISPDLKLVFFTLRQEE 256

Query: 422 KNAALLYLVREKISSDEQSLIFVSTRHHVEFLNVLFREEGIEPSVCYGEMDQDARKIHIS 481
           KNAALLYLVRE+ISSDEQSLIFVSTRHHVEFLNVLFREEGIEPSVCYGEMDQDARKIHIS
Sbjct: 257 KNAALLYLVREQISSDEQSLIFVSTRHHVEFLNVLFREEGIEPSVCYGEMDQDARKIHIS 316

Query: 482 RFRARKTMFLIVTDVAARGIDIPLLDNVINWDFPPKPKIFVHRVGRAARAGRTGAAFSFV 541
           RFRARKTMFLIVTDVAARGIDIPLLDNVINWDFPPKPKIFVHRVGRAARAGRTGAAFSFV
Sbjct: 317 RFRARKTMFLIVTDVAARGIDIPLLDNVINWDFPPKPKIFVHRVGRAARAGRTGAAFSFV 376

Query: 542 TSEDLPNLLDLHLFLSKPIRAAPTEEEVLLDKEGVFSKIDNAIASGETVYGRLPQTVIDL 601
           TSEDLPNLLDLHLFLSKPIRAAPTEEEVLLDKEGVFSKIDNAIASGETVYGRLPQTVIDL
Sbjct: 377 TSEDLPNLLDLHLFLSKPIRAAPTEEEVLLDKEGVFSKIDNAIASGETVYGRLPQTVIDL 436

Query: 602 ASDRIRETIDSSADLISLQKTCSNAFRMYSKSKPLPSKESIRRAKDLPREGLHPIFKNIL 661
           ASDRIRETIDSSADLISLQKTCSNAFRMYSKSKPLPSKESIRRAKDLPREGLHPIFKNIL
Sbjct: 437 ASDRIRETIDSSADLISLQKTCSNAFRMYSKSKPLPSKESIRRAKDLPREGLHPIFKNIL 496

Query: 662 EGGELKALAFSERLKTFRPKQTILEAEGETAKSKHRQGPRQWVDVMKRKRAVHEEVINLV 721
           EGGELKALAFSERLKTFRPKQTILEAEGETAKSKHRQGPRQWVDVMKRKRAVHEEVINLV
Sbjct: 497 EGGELKALAFSERLKTFRPKQTILEAEGETAKSKHRQGPRQWVDVMKRKRAVHEEVINLV 556

Query: 722 HKQRSAKHVEEELPLENISPKGKNMKGTRGLKKRKTASFKDEEFYINSVPTNHHTEAGLA 781
           HKQRSAKHVEEELPLENISPKGKNMKGTRGLKKRKTASFKDEEFYINSVPTNHHTEAGLA
Sbjct: 557 HKQRSAKHVEEELPLENISPKGKNMKGTRGLKKRKTASFKDEEFYINSVPTNHHTEAGLA 616

Query: 782 VKGDQGFGSNRLDNAVLDLVADDSSGMQKHKSVYHWDKRGKKYVKLNNGDRVTASGKIKT 841
           VKGDQGFGSNRLDNAVLDLVADDSSGMQKHKSVYHWDKRGKKYVKLNNGDRVTASGKIKT
Sbjct: 617 VKGDQGFGSNRLDNAVLDLVADDSSGMQKHKSVYHWDKRGKKYVKLNNGDRVTASGKIKT 676

Query: 842 ESGAKVKTNKTGIYKKWKERSHNKISLKGIR--NQRFSGNKRKFGSGKNQHSVPNAHVRS 901
           ESGAKVKTNKTGIYKKWKERSHNKISLKGI   NQRFSGNKRKFG+GKN+HSVPNAHVR+
Sbjct: 677 ESGAKVKTNKTGIYKKWKERSHNKISLKGISAGNQRFSGNKRKFGAGKNKHSVPNAHVRT 736

Query: 902 EVKNLDQIRKERQKKATRIQTMKNQPKRGKKKSGKKGNRGKAK 942
           EVKNLDQIRKERQKKATRIQTMKNQPKRGKKKSGKKGNRGKAK
Sbjct: 737 EVKNLDQIRKERQKKATRIQTMKNQPKRGKKKSGKKGNRGKAK 779

[Close]

BLAST of Cp4.1LG01g09040 vs. NCBI nr
Match: XP_022942470.1 (putative DEAD-box ATP-dependent RNA helicase 29 isoform X2 [Cucurbita moschata])

HSP 1 Score: 1455 bits (3766), Expect = 0.0
Identity = 754/774 (97.42%), Postives = 759/774 (98.06%), Query Frame = 0


Query: 182 QRREKQQKKAKSGGFESLGLSPNVYRGIKRKGYRVPTPIQRKTMPLILSGNDVVAMARTG 241
           +RREKQQKKAKSGGFESLGLSPNVYRGIKRKGYRVPTPIQRKTMPLILSGNDVVAMARTG
Sbjct: 17  KRREKQQKKAKSGGFESLGLSPNVYRGIKRKGYRVPTPIQRKTMPLILSGNDVVAMARTG 76

Query: 242 SGKTAAFLVPMLERLKQHEPQGGVRALILSPTRDLALQTLKFTKELGKFTDLRISLLVGG 301
           SGKTAAFLVPMLERLKQHEPQGGVRALILSPTRDLALQTLKFTKELGKFTDLRISLLVGG
Sbjct: 77  SGKTAAFLVPMLERLKQHEPQGGVRALILSPTRDLALQTLKFTKELGKFTDLRISLLVGG 136

Query: 302 DSMEAQFEELAQNPDIIIATPGRLMHHLSEVDDMTLRTVEYVVFDEADCLFDMGFAEQLH 361
           DSME QFEELAQNPDIIIATPGRLMHHLSEVDDMTLRTVEYVVFDEADCLFDMGFAEQLH
Sbjct: 137 DSMETQFEELAQNPDIIIATPGRLMHHLSEVDDMTLRTVEYVVFDEADCLFDMGFAEQLH 196

Query: 362 KILAQLSENRQTLLFSATLPSVLAEFAKAGLRDPQLVRLDVDNKISPDLKLVFFTLRQEE 421
           KILAQLSENRQTLLFSATLPSVLAEFAKAGLRDPQLVRLDVDNKISPDLKLVFFTLRQEE
Sbjct: 197 KILAQLSENRQTLLFSATLPSVLAEFAKAGLRDPQLVRLDVDNKISPDLKLVFFTLRQEE 256

Query: 422 KNAALLYLVREKISSDEQSLIFVSTRHHVEFLNVLFREEGIEPSVCYGEMDQDARKIHIS 481
           KNAALLYLVRE+ISSDEQSLIFVSTRHHVEFLNVLFREEGIEPSVCYGEMDQDARKIHIS
Sbjct: 257 KNAALLYLVREQISSDEQSLIFVSTRHHVEFLNVLFREEGIEPSVCYGEMDQDARKIHIS 316

Query: 482 RFRARKTMFLIVTDVAARGIDIPLLDNVINWDFPPKPKIFVHRVGRAARAGRTGAAFSFV 541
           RFRARKTMFLIVTDVAARGIDIPLLDNVINWDFPPKPKIFVHRVGRAARAGRTGAAFSFV
Sbjct: 317 RFRARKTMFLIVTDVAARGIDIPLLDNVINWDFPPKPKIFVHRVGRAARAGRTGAAFSFV 376

Query: 542 TSEDLPNLLDLHLFLSKPIRAAPTEEEVLLDKEGVFSKIDNAIASGETVYGRLPQTVIDL 601
           TSEDLPNLLDLHLFLSKPIRAAPTEEEVLLDKEGVFSKIDNAIASGETVYGRLPQTVIDL
Sbjct: 377 TSEDLPNLLDLHLFLSKPIRAAPTEEEVLLDKEGVFSKIDNAIASGETVYGRLPQTVIDL 436

Query: 602 ASDRIRETIDSSADLISLQKTCSNAFRMYSKSKPLPSKESIRRAKDLPREGLHPIFKNIL 661
           ASDRIRETIDSSADLISLQKTCSNAFRMYSKSKPLPSKESIRRAKDLPREGLHPIFKNIL
Sbjct: 437 ASDRIRETIDSSADLISLQKTCSNAFRMYSKSKPLPSKESIRRAKDLPREGLHPIFKNIL 496

Query: 662 EGGELKALAFSERLKTFRPKQTILEAEGETAKSKHRQGPRQWVDVMKRKRAVHEEVINLV 721
           EGGELKALAFSERLKTFRPKQTILEAEGETAKSKHRQGPRQWVDVMKRKRAVHEEVINLV
Sbjct: 497 EGGELKALAFSERLKTFRPKQTILEAEGETAKSKHRQGPRQWVDVMKRKRAVHEEVINLV 556

Query: 722 HKQRSAKHVEEELPLENISPKGKNMKGTRGLKKRKTASFKDEEFYINSVPTNHHTEAGLA 781
           HKQRSAKHVEEELPLENISPKGKNMKGTRGLKKRKTASFKDEEFYINSVPTNHHTEAGLA
Sbjct: 557 HKQRSAKHVEEELPLENISPKGKNMKGTRGLKKRKTASFKDEEFYINSVPTNHHTEAGLA 616

Query: 782 VKGDQGFGSNRLDNAVLDLVADDSSGMQKHKSVYHWDKRGKKYVKLNNGDRVTASGKIKT 841
           VKGDQGFGSNRLDNAVLDLVADDSSGMQKHKSVYHWDKRGKKYVKLNNGDRVTASGKIKT
Sbjct: 617 VKGDQGFGSNRLDNAVLDLVADDSSGMQKHKSVYHWDKRGKKYVKLNNGDRVTASGKIKT 676

Query: 842 ESGAKVKTNKTGIYKKWKERSHNKISLKGIR-------------NQRFSGNKRKFGSGKN 901
           ESGAKVKTNKTGIYKKWKERSHNKISLKGI              NQRFSGNKRKFG+GKN
Sbjct: 677 ESGAKVKTNKTGIYKKWKERSHNKISLKGISLGDHDGEAMNRAGNQRFSGNKRKFGAGKN 736

Query: 902 QHSVPNAHVRSEVKNLDQIRKERQKKATRIQTMKNQPKRGKKKSGKKGNRGKAK 942
           +HSVPNAHVR+EVKNLDQIRKERQKKATRIQTMKNQPKRGKKKSGKKGNRGKAK
Sbjct: 737 KHSVPNAHVRTEVKNLDQIRKERQKKATRIQTMKNQPKRGKKKSGKKGNRGKAK 790

[Close]

BLAST of Cp4.1LG01g09040 vs. NCBI nr
Match: XP_022942469.1 (putative DEAD-box ATP-dependent RNA helicase 29 isoform X1 [Cucurbita moschata])

HSP 1 Score: 1454 bits (3764), Expect = 0.0
Identity = 754/776 (97.16%), Postives = 759/776 (97.81%), Query Frame = 0


Query: 182 QRREKQQKKAKSGGFESLGLSPNVYRGIKRKGYRVPTPIQRKTMPLILSGNDVVAMARTG 241
           +RREKQQKKAKSGGFESLGLSPNVYRGIKRKGYRVPTPIQRKTMPLILSGNDVVAMARTG
Sbjct: 17  KRREKQQKKAKSGGFESLGLSPNVYRGIKRKGYRVPTPIQRKTMPLILSGNDVVAMARTG 76

Query: 242 SGKTAAFLVPMLERLKQHEPQGGVRALILSPTRDLALQTLKFTKELGKFTDLRISLLVGG 301
           SGKTAAFLVPMLERLKQHEPQGGVRALILSPTRDLALQTLKFTKELGKFTDLRISLLVGG
Sbjct: 77  SGKTAAFLVPMLERLKQHEPQGGVRALILSPTRDLALQTLKFTKELGKFTDLRISLLVGG 136

Query: 302 DSMEAQFEELAQNPDIIIATPGRLMHHLSEVDDMTLRTVEYVVFDEADCLFDMGFAEQLH 361
           DSME QFEELAQNPDIIIATPGRLMHHLSEVDDMTLRTVEYVVFDEADCLFDMGFAEQLH
Sbjct: 137 DSMETQFEELAQNPDIIIATPGRLMHHLSEVDDMTLRTVEYVVFDEADCLFDMGFAEQLH 196

Query: 362 KILAQLSENRQTLLFSATLPSVLAEFAKAGLRDPQLVRLDVDNKISPDLKLVFFTLRQEE 421
           KILAQLSENRQTLLFSATLPSVLAEFAKAGLRDPQLVRLDVDNKISPDLKLVFFTLRQEE
Sbjct: 197 KILAQLSENRQTLLFSATLPSVLAEFAKAGLRDPQLVRLDVDNKISPDLKLVFFTLRQEE 256

Query: 422 KNAALLYLVREKISSDEQSLIFVSTRHHVEFLNVLFREEGIEPSVCYGEMDQDARKIHIS 481
           KNAALLYLVRE+ISSDEQSLIFVSTRHHVEFLNVLFREEGIEPSVCYGEMDQDARKIHIS
Sbjct: 257 KNAALLYLVREQISSDEQSLIFVSTRHHVEFLNVLFREEGIEPSVCYGEMDQDARKIHIS 316

Query: 482 RFRARKTMFLIVTDVAARGIDIPLLDNVINWDFPPKPKIFVHRVGRAARAGRTGAAFSFV 541
           RFRARKTMFLIVTDVAARGIDIPLLDNVINWDFPPKPKIFVHRVGRAARAGRTGAAFSFV
Sbjct: 317 RFRARKTMFLIVTDVAARGIDIPLLDNVINWDFPPKPKIFVHRVGRAARAGRTGAAFSFV 376

Query: 542 TSEDLPNLLDLHLFLSKPIRAAPTEEEVLLDKEGVFSKIDNAIASGETVYGRLPQTVIDL 601
           TSEDLPNLLDLHLFLSKPIRAAPTEEEVLLDKEGVFSKIDNAIASGETVYGRLPQTVIDL
Sbjct: 377 TSEDLPNLLDLHLFLSKPIRAAPTEEEVLLDKEGVFSKIDNAIASGETVYGRLPQTVIDL 436

Query: 602 ASDRIRETIDSSADLISLQKTCSNAFRMYSKSKPLPSKESIRRAKDLPREGLHPIFKNIL 661
           ASDRIRETIDSSADLISLQKTCSNAFRMYSKSKPLPSKESIRRAKDLPREGLHPIFKNIL
Sbjct: 437 ASDRIRETIDSSADLISLQKTCSNAFRMYSKSKPLPSKESIRRAKDLPREGLHPIFKNIL 496

Query: 662 EGGELKALAFSERLKTFRPKQTILEAEGETAKSKHRQGPRQWVDVMKRKRAVHEEVINLV 721
           EGGELKALAFSERLKTFRPKQTILEAEGETAKSKHRQGPRQWVDVMKRKRAVHEEVINLV
Sbjct: 497 EGGELKALAFSERLKTFRPKQTILEAEGETAKSKHRQGPRQWVDVMKRKRAVHEEVINLV 556

Query: 722 HKQRSAKHVEEELPLENISPKGKNMKGTRGLKKRKTASFKDEEFYINSVPTNHHTEAGLA 781
           HKQRSAKHVEEELPLENISPKGKNMKGTRGLKKRKTASFKDEEFYINSVPTNHHTEAGLA
Sbjct: 557 HKQRSAKHVEEELPLENISPKGKNMKGTRGLKKRKTASFKDEEFYINSVPTNHHTEAGLA 616

Query: 782 VKGDQGFGSNRLDNAVLDLVADDSSGMQKHKSVYHWDKRGKKYVKLNNGDRVTASGKIKT 841
           VKGDQGFGSNRLDNAVLDLVADDSSGMQKHKSVYHWDKRGKKYVKLNNGDRVTASGKIKT
Sbjct: 617 VKGDQGFGSNRLDNAVLDLVADDSSGMQKHKSVYHWDKRGKKYVKLNNGDRVTASGKIKT 676

Query: 842 ESGAKVKTNKTGIYKKWKERSHNKISLKGIR---------------NQRFSGNKRKFGSG 901
           ESGAKVKTNKTGIYKKWKERSHNKISLKGI                NQRFSGNKRKFG+G
Sbjct: 677 ESGAKVKTNKTGIYKKWKERSHNKISLKGISLGDHDGEAMNRAGAGNQRFSGNKRKFGAG 736

Query: 902 KNQHSVPNAHVRSEVKNLDQIRKERQKKATRIQTMKNQPKRGKKKSGKKGNRGKAK 942
           KN+HSVPNAHVR+EVKNLDQIRKERQKKATRIQTMKNQPKRGKKKSGKKGNRGKAK
Sbjct: 737 KNKHSVPNAHVRTEVKNLDQIRKERQKKATRIQTMKNQPKRGKKKSGKKGNRGKAK 792

[Close]

BLAST of Cp4.1LG01g09040 vs. ExPASy TrEMBL
Match: A0A6J1FWD3 (RNA helicase OS=Cucurbita moschata OX=3662 GN=LOC111447496 PE=3 SV=1)

HSP 1 Score: 1455 bits (3766), Expect = 0.0
Identity = 754/774 (97.42%), Postives = 759/774 (98.06%), Query Frame = 0


Query: 182 QRREKQQKKAKSGGFESLGLSPNVYRGIKRKGYRVPTPIQRKTMPLILSGNDVVAMARTG 241
           +RREKQQKKAKSGGFESLGLSPNVYRGIKRKGYRVPTPIQRKTMPLILSGNDVVAMARTG
Sbjct: 17  KRREKQQKKAKSGGFESLGLSPNVYRGIKRKGYRVPTPIQRKTMPLILSGNDVVAMARTG 76

Query: 242 SGKTAAFLVPMLERLKQHEPQGGVRALILSPTRDLALQTLKFTKELGKFTDLRISLLVGG 301
           SGKTAAFLVPMLERLKQHEPQGGVRALILSPTRDLALQTLKFTKELGKFTDLRISLLVGG
Sbjct: 77  SGKTAAFLVPMLERLKQHEPQGGVRALILSPTRDLALQTLKFTKELGKFTDLRISLLVGG 136

Query: 302 DSMEAQFEELAQNPDIIIATPGRLMHHLSEVDDMTLRTVEYVVFDEADCLFDMGFAEQLH 361
           DSME QFEELAQNPDIIIATPGRLMHHLSEVDDMTLRTVEYVVFDEADCLFDMGFAEQLH
Sbjct: 137 DSMETQFEELAQNPDIIIATPGRLMHHLSEVDDMTLRTVEYVVFDEADCLFDMGFAEQLH 196

Query: 362 KILAQLSENRQTLLFSATLPSVLAEFAKAGLRDPQLVRLDVDNKISPDLKLVFFTLRQEE 421
           KILAQLSENRQTLLFSATLPSVLAEFAKAGLRDPQLVRLDVDNKISPDLKLVFFTLRQEE
Sbjct: 197 KILAQLSENRQTLLFSATLPSVLAEFAKAGLRDPQLVRLDVDNKISPDLKLVFFTLRQEE 256

Query: 422 KNAALLYLVREKISSDEQSLIFVSTRHHVEFLNVLFREEGIEPSVCYGEMDQDARKIHIS 481
           KNAALLYLVRE+ISSDEQSLIFVSTRHHVEFLNVLFREEGIEPSVCYGEMDQDARKIHIS
Sbjct: 257 KNAALLYLVREQISSDEQSLIFVSTRHHVEFLNVLFREEGIEPSVCYGEMDQDARKIHIS 316

Query: 482 RFRARKTMFLIVTDVAARGIDIPLLDNVINWDFPPKPKIFVHRVGRAARAGRTGAAFSFV 541
           RFRARKTMFLIVTDVAARGIDIPLLDNVINWDFPPKPKIFVHRVGRAARAGRTGAAFSFV
Sbjct: 317 RFRARKTMFLIVTDVAARGIDIPLLDNVINWDFPPKPKIFVHRVGRAARAGRTGAAFSFV 376

Query: 542 TSEDLPNLLDLHLFLSKPIRAAPTEEEVLLDKEGVFSKIDNAIASGETVYGRLPQTVIDL 601
           TSEDLPNLLDLHLFLSKPIRAAPTEEEVLLDKEGVFSKIDNAIASGETVYGRLPQTVIDL
Sbjct: 377 TSEDLPNLLDLHLFLSKPIRAAPTEEEVLLDKEGVFSKIDNAIASGETVYGRLPQTVIDL 436

Query: 602 ASDRIRETIDSSADLISLQKTCSNAFRMYSKSKPLPSKESIRRAKDLPREGLHPIFKNIL 661
           ASDRIRETIDSSADLISLQKTCSNAFRMYSKSKPLPSKESIRRAKDLPREGLHPIFKNIL
Sbjct: 437 ASDRIRETIDSSADLISLQKTCSNAFRMYSKSKPLPSKESIRRAKDLPREGLHPIFKNIL 496

Query: 662 EGGELKALAFSERLKTFRPKQTILEAEGETAKSKHRQGPRQWVDVMKRKRAVHEEVINLV 721
           EGGELKALAFSERLKTFRPKQTILEAEGETAKSKHRQGPRQWVDVMKRKRAVHEEVINLV
Sbjct: 497 EGGELKALAFSERLKTFRPKQTILEAEGETAKSKHRQGPRQWVDVMKRKRAVHEEVINLV 556

Query: 722 HKQRSAKHVEEELPLENISPKGKNMKGTRGLKKRKTASFKDEEFYINSVPTNHHTEAGLA 781
           HKQRSAKHVEEELPLENISPKGKNMKGTRGLKKRKTASFKDEEFYINSVPTNHHTEAGLA
Sbjct: 557 HKQRSAKHVEEELPLENISPKGKNMKGTRGLKKRKTASFKDEEFYINSVPTNHHTEAGLA 616

Query: 782 VKGDQGFGSNRLDNAVLDLVADDSSGMQKHKSVYHWDKRGKKYVKLNNGDRVTASGKIKT 841
           VKGDQGFGSNRLDNAVLDLVADDSSGMQKHKSVYHWDKRGKKYVKLNNGDRVTASGKIKT
Sbjct: 617 VKGDQGFGSNRLDNAVLDLVADDSSGMQKHKSVYHWDKRGKKYVKLNNGDRVTASGKIKT 676

Query: 842 ESGAKVKTNKTGIYKKWKERSHNKISLKGIR-------------NQRFSGNKRKFGSGKN 901
           ESGAKVKTNKTGIYKKWKERSHNKISLKGI              NQRFSGNKRKFG+GKN
Sbjct: 677 ESGAKVKTNKTGIYKKWKERSHNKISLKGISLGDHDGEAMNRAGNQRFSGNKRKFGAGKN 736

Query: 902 QHSVPNAHVRSEVKNLDQIRKERQKKATRIQTMKNQPKRGKKKSGKKGNRGKAK 942
           +HSVPNAHVR+EVKNLDQIRKERQKKATRIQTMKNQPKRGKKKSGKKGNRGKAK
Sbjct: 737 KHSVPNAHVRTEVKNLDQIRKERQKKATRIQTMKNQPKRGKKKSGKKGNRGKAK 790

[Close]

BLAST of Cp4.1LG01g09040 vs. ExPASy TrEMBL
Match: A0A6J1FRF0 (RNA helicase OS=Cucurbita moschata OX=3662 GN=LOC111447496 PE=3 SV=1)

HSP 1 Score: 1454 bits (3764), Expect = 0.0
Identity = 754/776 (97.16%), Postives = 759/776 (97.81%), Query Frame = 0


Query: 182 QRREKQQKKAKSGGFESLGLSPNVYRGIKRKGYRVPTPIQRKTMPLILSGNDVVAMARTG 241
           +RREKQQKKAKSGGFESLGLSPNVYRGIKRKGYRVPTPIQRKTMPLILSGNDVVAMARTG
Sbjct: 17  KRREKQQKKAKSGGFESLGLSPNVYRGIKRKGYRVPTPIQRKTMPLILSGNDVVAMARTG 76

Query: 242 SGKTAAFLVPMLERLKQHEPQGGVRALILSPTRDLALQTLKFTKELGKFTDLRISLLVGG 301
           SGKTAAFLVPMLERLKQHEPQGGVRALILSPTRDLALQTLKFTKELGKFTDLRISLLVGG
Sbjct: 77  SGKTAAFLVPMLERLKQHEPQGGVRALILSPTRDLALQTLKFTKELGKFTDLRISLLVGG 136

Query: 302 DSMEAQFEELAQNPDIIIATPGRLMHHLSEVDDMTLRTVEYVVFDEADCLFDMGFAEQLH 361
           DSME QFEELAQNPDIIIATPGRLMHHLSEVDDMTLRTVEYVVFDEADCLFDMGFAEQLH
Sbjct: 137 DSMETQFEELAQNPDIIIATPGRLMHHLSEVDDMTLRTVEYVVFDEADCLFDMGFAEQLH 196

Query: 362 KILAQLSENRQTLLFSATLPSVLAEFAKAGLRDPQLVRLDVDNKISPDLKLVFFTLRQEE 421
           KILAQLSENRQTLLFSATLPSVLAEFAKAGLRDPQLVRLDVDNKISPDLKLVFFTLRQEE
Sbjct: 197 KILAQLSENRQTLLFSATLPSVLAEFAKAGLRDPQLVRLDVDNKISPDLKLVFFTLRQEE 256

Query: 422 KNAALLYLVREKISSDEQSLIFVSTRHHVEFLNVLFREEGIEPSVCYGEMDQDARKIHIS 481
           KNAALLYLVRE+ISSDEQSLIFVSTRHHVEFLNVLFREEGIEPSVCYGEMDQDARKIHIS
Sbjct: 257 KNAALLYLVREQISSDEQSLIFVSTRHHVEFLNVLFREEGIEPSVCYGEMDQDARKIHIS 316

Query: 482 RFRARKTMFLIVTDVAARGIDIPLLDNVINWDFPPKPKIFVHRVGRAARAGRTGAAFSFV 541
           RFRARKTMFLIVTDVAARGIDIPLLDNVINWDFPPKPKIFVHRVGRAARAGRTGAAFSFV
Sbjct: 317 RFRARKTMFLIVTDVAARGIDIPLLDNVINWDFPPKPKIFVHRVGRAARAGRTGAAFSFV 376

Query: 542 TSEDLPNLLDLHLFLSKPIRAAPTEEEVLLDKEGVFSKIDNAIASGETVYGRLPQTVIDL 601
           TSEDLPNLLDLHLFLSKPIRAAPTEEEVLLDKEGVFSKIDNAIASGETVYGRLPQTVIDL
Sbjct: 377 TSEDLPNLLDLHLFLSKPIRAAPTEEEVLLDKEGVFSKIDNAIASGETVYGRLPQTVIDL 436

Query: 602 ASDRIRETIDSSADLISLQKTCSNAFRMYSKSKPLPSKESIRRAKDLPREGLHPIFKNIL 661
           ASDRIRETIDSSADLISLQKTCSNAFRMYSKSKPLPSKESIRRAKDLPREGLHPIFKNIL
Sbjct: 437 ASDRIRETIDSSADLISLQKTCSNAFRMYSKSKPLPSKESIRRAKDLPREGLHPIFKNIL 496

Query: 662 EGGELKALAFSERLKTFRPKQTILEAEGETAKSKHRQGPRQWVDVMKRKRAVHEEVINLV 721
           EGGELKALAFSERLKTFRPKQTILEAEGETAKSKHRQGPRQWVDVMKRKRAVHEEVINLV
Sbjct: 497 EGGELKALAFSERLKTFRPKQTILEAEGETAKSKHRQGPRQWVDVMKRKRAVHEEVINLV 556

Query: 722 HKQRSAKHVEEELPLENISPKGKNMKGTRGLKKRKTASFKDEEFYINSVPTNHHTEAGLA 781
           HKQRSAKHVEEELPLENISPKGKNMKGTRGLKKRKTASFKDEEFYINSVPTNHHTEAGLA
Sbjct: 557 HKQRSAKHVEEELPLENISPKGKNMKGTRGLKKRKTASFKDEEFYINSVPTNHHTEAGLA 616

Query: 782 VKGDQGFGSNRLDNAVLDLVADDSSGMQKHKSVYHWDKRGKKYVKLNNGDRVTASGKIKT 841
           VKGDQGFGSNRLDNAVLDLVADDSSGMQKHKSVYHWDKRGKKYVKLNNGDRVTASGKIKT
Sbjct: 617 VKGDQGFGSNRLDNAVLDLVADDSSGMQKHKSVYHWDKRGKKYVKLNNGDRVTASGKIKT 676

Query: 842 ESGAKVKTNKTGIYKKWKERSHNKISLKGIR---------------NQRFSGNKRKFGSG 901
           ESGAKVKTNKTGIYKKWKERSHNKISLKGI                NQRFSGNKRKFG+G
Sbjct: 677 ESGAKVKTNKTGIYKKWKERSHNKISLKGISLGDHDGEAMNRAGAGNQRFSGNKRKFGAG 736

Query: 902 KNQHSVPNAHVRSEVKNLDQIRKERQKKATRIQTMKNQPKRGKKKSGKKGNRGKAK 942
           KN+HSVPNAHVR+EVKNLDQIRKERQKKATRIQTMKNQPKRGKKKSGKKGNRGKAK
Sbjct: 737 KNKHSVPNAHVRTEVKNLDQIRKERQKKATRIQTMKNQPKRGKKKSGKKGNRGKAK 792

[Close]

BLAST of Cp4.1LG01g09040 vs. ExPASy TrEMBL
Match: A0A6J1INZ1 (RNA helicase OS=Cucurbita maxima OX=3661 GN=LOC111478139 PE=3 SV=1)

HSP 1 Score: 1447 bits (3746), Expect = 0.0
Identity = 751/774 (97.03%), Postives = 755/774 (97.55%), Query Frame = 0


Query: 182 QRREKQQKKAKSGGFESLGLSPNVYRGIKRKGYRVPTPIQRKTMPLILSGNDVVAMARTG 241
           +RREKQQKKAKSGGFESLGLSPNVYRGIKRKGYRVPTPIQRKTMPLILSGNDVVAMARTG
Sbjct: 17  KRREKQQKKAKSGGFESLGLSPNVYRGIKRKGYRVPTPIQRKTMPLILSGNDVVAMARTG 76

Query: 242 SGKTAAFLVPMLERLKQHEPQGGVRALILSPTRDLALQTLKFTKELGKFTDLRISLLVGG 301
           SGKTAAFLVPMLERLKQHEPQGGVRALILSPTRDLALQTLKFTKELGKFTDLRISLLVGG
Sbjct: 77  SGKTAAFLVPMLERLKQHEPQGGVRALILSPTRDLALQTLKFTKELGKFTDLRISLLVGG 136

Query: 302 DSMEAQFEELAQNPDIIIATPGRLMHHLSEVDDMTLRTVEYVVFDEADCLFDMGFAEQLH 361
           DSME QFEELAQNPDIIIATPGRLMHHLSEVDDMTLRTVEYVVFDEADCLFDMGFAEQLH
Sbjct: 137 DSMETQFEELAQNPDIIIATPGRLMHHLSEVDDMTLRTVEYVVFDEADCLFDMGFAEQLH 196

Query: 362 KILAQLSENRQTLLFSATLPSVLAEFAKAGLRDPQLVRLDVDNKISPDLKLVFFTLRQEE 421
           KIL QLSENRQTLLFSATLPSVLAEFAKAGLRDPQLVRLDVDNKISPDLKLVFFTLRQEE
Sbjct: 197 KILTQLSENRQTLLFSATLPSVLAEFAKAGLRDPQLVRLDVDNKISPDLKLVFFTLRQEE 256

Query: 422 KNAALLYLVREKISSDEQSLIFVSTRHHVEFLNVLFREEGIEPSVCYGEMDQDARKIHIS 481
           KNAALLYLVRE+ISSDEQSLIFVSTRHHVEFLNVLFREEGIEPSVCYGEMDQDARKIHIS
Sbjct: 257 KNAALLYLVREQISSDEQSLIFVSTRHHVEFLNVLFREEGIEPSVCYGEMDQDARKIHIS 316

Query: 482 RFRARKTMFLIVTDVAARGIDIPLLDNVINWDFPPKPKIFVHRVGRAARAGRTGAAFSFV 541
           RFRARKTMFLIVTDVAARGIDIPLLDNVINWDFPPKPKIFVHRVGRAARAGRTGAAFSFV
Sbjct: 317 RFRARKTMFLIVTDVAARGIDIPLLDNVINWDFPPKPKIFVHRVGRAARAGRTGAAFSFV 376

Query: 542 TSEDLPNLLDLHLFLSKPIRAAPTEEEVLLDKEGVFSKIDNAIASGETVYGRLPQTVIDL 601
           TSEDLPNLLDLHLFLSKPIRAAPTEEEVLLDKEGVFSKIDNAIASGETVYGRLPQTVIDL
Sbjct: 377 TSEDLPNLLDLHLFLSKPIRAAPTEEEVLLDKEGVFSKIDNAIASGETVYGRLPQTVIDL 436

Query: 602 ASDRIRETIDSSADLISLQKTCSNAFRMYSKSKPLPSKESIRRAKDLPREGLHPIFKNIL 661
           ASDRIRETIDSSADLISLQKTCSNAFRMYSKSKPLPSKESIRRAKDLPREGLHPIFKNIL
Sbjct: 437 ASDRIRETIDSSADLISLQKTCSNAFRMYSKSKPLPSKESIRRAKDLPREGLHPIFKNIL 496

Query: 662 EGGELKALAFSERLKTFRPKQTILEAEGETAKSKHRQGPRQWVDVMKRKRAVHEEVINLV 721
           EGGELKALAFSERLKTFRPKQTILEAEGETAKSKHRQGPRQWVDVMKRKRAVHEEVINLV
Sbjct: 497 EGGELKALAFSERLKTFRPKQTILEAEGETAKSKHRQGPRQWVDVMKRKRAVHEEVINLV 556

Query: 722 HKQRSAKHVEEELPLENISPKGKNMKGTRGLKKRKTASFKDEEFYINSVPTNHHTEAGLA 781
           HKQRSAKHVEEELPLENIS KGKNMKGTRGLKKRKTASFKDEEFYINSVPTNHHTEAGLA
Sbjct: 557 HKQRSAKHVEEELPLENISTKGKNMKGTRGLKKRKTASFKDEEFYINSVPTNHHTEAGLA 616

Query: 782 VKGDQGFGSNRLDNAVLDLVADDSSGMQKHKSVYHWDKRGKKYVKLNNGDRVTASGKIKT 841
           VKGDQGFGSNRLDNAVLDLVADDSSGMQKHKSVYHWDKRGKKYVKLNNGDRVTASGKIKT
Sbjct: 617 VKGDQGFGSNRLDNAVLDLVADDSSGMQKHKSVYHWDKRGKKYVKLNNGDRVTASGKIKT 676

Query: 842 ESGAKVKTNKTGIYKKWKERSHNKISLKGIR-------------NQRFSGNKRKFGSGKN 901
           ESGAKVKTNKTGIYKKWKERSHNKISLKGI              NQRFSGNKRKFGS KN
Sbjct: 677 ESGAKVKTNKTGIYKKWKERSHNKISLKGISLGDHDGEATNRAGNQRFSGNKRKFGSSKN 736

Query: 902 QHSVPNAHVRSEVKNLDQIRKERQKKATRIQTMKNQPKRGKKKSGKKGNRGKAK 942
           +HSVPNAHVR+EVKNLDQIRKERQKKA RIQTMKNQPKRGKKKSGKKGNRGKAK
Sbjct: 737 KHSVPNAHVRTEVKNLDQIRKERQKKANRIQTMKNQPKRGKKKSGKKGNRGKAK 790

[Close]

BLAST of Cp4.1LG01g09040 vs. ExPASy TrEMBL
Match: A0A6J1ILN0 (RNA helicase OS=Cucurbita maxima OX=3661 GN=LOC111478139 PE=3 SV=1)

HSP 1 Score: 1446 bits (3744), Expect = 0.0
Identity = 751/776 (96.78%), Postives = 755/776 (97.29%), Query Frame = 0


Query: 182 QRREKQQKKAKSGGFESLGLSPNVYRGIKRKGYRVPTPIQRKTMPLILSGNDVVAMARTG 241
           +RREKQQKKAKSGGFESLGLSPNVYRGIKRKGYRVPTPIQRKTMPLILSGNDVVAMARTG
Sbjct: 17  KRREKQQKKAKSGGFESLGLSPNVYRGIKRKGYRVPTPIQRKTMPLILSGNDVVAMARTG 76

Query: 242 SGKTAAFLVPMLERLKQHEPQGGVRALILSPTRDLALQTLKFTKELGKFTDLRISLLVGG 301
           SGKTAAFLVPMLERLKQHEPQGGVRALILSPTRDLALQTLKFTKELGKFTDLRISLLVGG
Sbjct: 77  SGKTAAFLVPMLERLKQHEPQGGVRALILSPTRDLALQTLKFTKELGKFTDLRISLLVGG 136

Query: 302 DSMEAQFEELAQNPDIIIATPGRLMHHLSEVDDMTLRTVEYVVFDEADCLFDMGFAEQLH 361
           DSME QFEELAQNPDIIIATPGRLMHHLSEVDDMTLRTVEYVVFDEADCLFDMGFAEQLH
Sbjct: 137 DSMETQFEELAQNPDIIIATPGRLMHHLSEVDDMTLRTVEYVVFDEADCLFDMGFAEQLH 196

Query: 362 KILAQLSENRQTLLFSATLPSVLAEFAKAGLRDPQLVRLDVDNKISPDLKLVFFTLRQEE 421
           KIL QLSENRQTLLFSATLPSVLAEFAKAGLRDPQLVRLDVDNKISPDLKLVFFTLRQEE
Sbjct: 197 KILTQLSENRQTLLFSATLPSVLAEFAKAGLRDPQLVRLDVDNKISPDLKLVFFTLRQEE 256

Query: 422 KNAALLYLVREKISSDEQSLIFVSTRHHVEFLNVLFREEGIEPSVCYGEMDQDARKIHIS 481
           KNAALLYLVRE+ISSDEQSLIFVSTRHHVEFLNVLFREEGIEPSVCYGEMDQDARKIHIS
Sbjct: 257 KNAALLYLVREQISSDEQSLIFVSTRHHVEFLNVLFREEGIEPSVCYGEMDQDARKIHIS 316

Query: 482 RFRARKTMFLIVTDVAARGIDIPLLDNVINWDFPPKPKIFVHRVGRAARAGRTGAAFSFV 541
           RFRARKTMFLIVTDVAARGIDIPLLDNVINWDFPPKPKIFVHRVGRAARAGRTGAAFSFV
Sbjct: 317 RFRARKTMFLIVTDVAARGIDIPLLDNVINWDFPPKPKIFVHRVGRAARAGRTGAAFSFV 376

Query: 542 TSEDLPNLLDLHLFLSKPIRAAPTEEEVLLDKEGVFSKIDNAIASGETVYGRLPQTVIDL 601
           TSEDLPNLLDLHLFLSKPIRAAPTEEEVLLDKEGVFSKIDNAIASGETVYGRLPQTVIDL
Sbjct: 377 TSEDLPNLLDLHLFLSKPIRAAPTEEEVLLDKEGVFSKIDNAIASGETVYGRLPQTVIDL 436

Query: 602 ASDRIRETIDSSADLISLQKTCSNAFRMYSKSKPLPSKESIRRAKDLPREGLHPIFKNIL 661
           ASDRIRETIDSSADLISLQKTCSNAFRMYSKSKPLPSKESIRRAKDLPREGLHPIFKNIL
Sbjct: 437 ASDRIRETIDSSADLISLQKTCSNAFRMYSKSKPLPSKESIRRAKDLPREGLHPIFKNIL 496

Query: 662 EGGELKALAFSERLKTFRPKQTILEAEGETAKSKHRQGPRQWVDVMKRKRAVHEEVINLV 721
           EGGELKALAFSERLKTFRPKQTILEAEGETAKSKHRQGPRQWVDVMKRKRAVHEEVINLV
Sbjct: 497 EGGELKALAFSERLKTFRPKQTILEAEGETAKSKHRQGPRQWVDVMKRKRAVHEEVINLV 556

Query: 722 HKQRSAKHVEEELPLENISPKGKNMKGTRGLKKRKTASFKDEEFYINSVPTNHHTEAGLA 781
           HKQRSAKHVEEELPLENIS KGKNMKGTRGLKKRKTASFKDEEFYINSVPTNHHTEAGLA
Sbjct: 557 HKQRSAKHVEEELPLENISTKGKNMKGTRGLKKRKTASFKDEEFYINSVPTNHHTEAGLA 616

Query: 782 VKGDQGFGSNRLDNAVLDLVADDSSGMQKHKSVYHWDKRGKKYVKLNNGDRVTASGKIKT 841
           VKGDQGFGSNRLDNAVLDLVADDSSGMQKHKSVYHWDKRGKKYVKLNNGDRVTASGKIKT
Sbjct: 617 VKGDQGFGSNRLDNAVLDLVADDSSGMQKHKSVYHWDKRGKKYVKLNNGDRVTASGKIKT 676

Query: 842 ESGAKVKTNKTGIYKKWKERSHNKISLKGIR---------------NQRFSGNKRKFGSG 901
           ESGAKVKTNKTGIYKKWKERSHNKISLKGI                NQRFSGNKRKFGS 
Sbjct: 677 ESGAKVKTNKTGIYKKWKERSHNKISLKGISLGDHDGEATNRAGAGNQRFSGNKRKFGSS 736

Query: 902 KNQHSVPNAHVRSEVKNLDQIRKERQKKATRIQTMKNQPKRGKKKSGKKGNRGKAK 942
           KN+HSVPNAHVR+EVKNLDQIRKERQKKA RIQTMKNQPKRGKKKSGKKGNRGKAK
Sbjct: 737 KNKHSVPNAHVRTEVKNLDQIRKERQKKANRIQTMKNQPKRGKKKSGKKGNRGKAK 792

[Close]

BLAST of Cp4.1LG01g09040 vs. ExPASy TrEMBL
Match: A0A0A0M3G2 (RNA helicase OS=Cucumis sativus OX=3659 GN=Csa_1G688130 PE=3 SV=1)

HSP 1 Score: 1365 bits (3533), Expect = 0.0
Identity = 707/775 (91.23%), Postives = 736/775 (94.97%), Query Frame = 0


Query: 182 QRREKQQKKAKSGGFESLGLSPNVYRGIKRKGYRVPTPIQRKTMPLILSGNDVVAMARTG 241
           +RREKQQKKAKSGGFESLGLS NV+RGIKRKGYRVPTPIQRKTMPLILSG DVVAMARTG
Sbjct: 17  KRREKQQKKAKSGGFESLGLSANVFRGIKRKGYRVPTPIQRKTMPLILSGADVVAMARTG 76

Query: 242 SGKTAAFLVPMLERLKQHEPQGGVRALILSPTRDLALQTLKFTKELGKFTDLRISLLVGG 301
           SGKTAAFLVPMLERLKQHEPQGGVRALILSPTRDLALQTLKFTKELGKFTDLRISLLVGG
Sbjct: 77  SGKTAAFLVPMLERLKQHEPQGGVRALILSPTRDLALQTLKFTKELGKFTDLRISLLVGG 136

Query: 302 DSMEAQFEELAQNPDIIIATPGRLMHHLSEVDDMTLRTVEYVVFDEADCLFDMGFAEQLH 361
           DSME QFEELAQ+PD+IIATPGRLMHHL+EVDDMTLRTVEYVVFDEADCLFDMGFAEQLH
Sbjct: 137 DSMETQFEELAQSPDVIIATPGRLMHHLAEVDDMTLRTVEYVVFDEADCLFDMGFAEQLH 196

Query: 362 KILAQLSENRQTLLFSATLPSVLAEFAKAGLRDPQLVRLDVDNKISPDLKLVFFTLRQEE 421
           KILAQLSENRQTLLFSATLPSVLAEFAKAGLRDPQLVRLD+D KISPDLK+VFFTLRQEE
Sbjct: 197 KILAQLSENRQTLLFSATLPSVLAEFAKAGLRDPQLVRLDLDTKISPDLKVVFFTLRQEE 256

Query: 422 KNAALLYLVREKISSDEQSLIFVSTRHHVEFLNVLFREEGIEPSVCYGEMDQDARKIHIS 481
           KNAALLYL+RE+IS+D+QSLIFVSTRHHVEFLNVLFREEGIEPSVCYGEMDQDARKIHIS
Sbjct: 257 KNAALLYLIREQISADQQSLIFVSTRHHVEFLNVLFREEGIEPSVCYGEMDQDARKIHIS 316

Query: 482 RFRARKTMFLIVTDVAARGIDIPLLDNVINWDFPPKPKIFVHRVGRAARAGRTGAAFSFV 541
           RFRAR+TMFLIVTDVAARGIDIPLLDNVINWDFPPKPKIFVHRVGRAARAGRTG AFSFV
Sbjct: 317 RFRARRTMFLIVTDVAARGIDIPLLDNVINWDFPPKPKIFVHRVGRAARAGRTGTAFSFV 376

Query: 542 TSEDLPNLLDLHLFLSKPIRAAPTEEEVLLDKEGVFSKIDNAIASGETVYGRLPQTVIDL 601
           TSEDLPNLLDLHLFLSKPIRAAPTEEEVLLDKEGVFSKID+AIASGETVYGRLPQTVIDL
Sbjct: 377 TSEDLPNLLDLHLFLSKPIRAAPTEEEVLLDKEGVFSKIDHAIASGETVYGRLPQTVIDL 436

Query: 602 ASDRIRETIDSSADLISLQKTCSNAFRMYSKSKPLPSKESIRRAKDLPREGLHPIFKNIL 661
           ASDRIRETIDSSADLISLQKTCSNAFRMYSKSKPLPSKESIRRAKDLPREGLHPIFK  L
Sbjct: 437 ASDRIRETIDSSADLISLQKTCSNAFRMYSKSKPLPSKESIRRAKDLPREGLHPIFKTAL 496

Query: 662 EGGELKALAFSERLKTFRPKQTILEAEGETAKSKHRQGPRQWVDVMKRKRAVHEEVINLV 721
           EGGEL ALAFSERLKTFRPKQTILEAEGET+KS+HRQGP QWVDVMKRKRA+HEEVINLV
Sbjct: 497 EGGELMALAFSERLKTFRPKQTILEAEGETSKSRHRQGPNQWVDVMKRKRAIHEEVINLV 556

Query: 722 HKQRSAKHVEEELPLENISPKGKNMKGTRGLKKRKTASFKDEEFYINSVPTNHHTEAGLA 781
           H+Q+ AKHVEEELPLENISPK K  KG RGLK+RKT SFKDEEFYINSVPTNHHTEAGL 
Sbjct: 557 HQQQFAKHVEEELPLENISPKDKQKKGPRGLKRRKTTSFKDEEFYINSVPTNHHTEAGLT 616

Query: 782 VKGDQGFGSNRLDNAVLDLVADDSSGMQKHKSVYHWDKRGKKYVKLNNGDRVTASGKIKT 841
           VKGDQGFGSNRLDNAVLDLVADDSSGMQK+KSVYHWDKR KKYVKLNNGDRVTASGKIKT
Sbjct: 617 VKGDQGFGSNRLDNAVLDLVADDSSGMQKNKSVYHWDKRSKKYVKLNNGDRVTASGKIKT 676

Query: 842 ESGAKVKTNKTGIYKKWKERSHNKISLKGIRN-------------QRFSGNKRKFGSGKN 901
           ESGAKVK NKTGIYKKWKERSHNKISLKGI N             QRFSGNKR+FG G+N
Sbjct: 677 ESGAKVKANKTGIYKKWKERSHNKISLKGISNGEHDGDAINTGGNQRFSGNKRRFGQGRN 736

Query: 902 QHSVPNAHVRSEVKNLDQIRKERQKKATRIQTMKN-QPKRGKKKSGKKGNRGKAK 942
           +HSVPNAHVR EVKNLDQIRKERQKKA ++Q MKN +PKRGKK SGK+G++ KAK
Sbjct: 737 KHSVPNAHVRPEVKNLDQIRKERQKKADKVQHMKNNRPKRGKK-SGKRGSKRKAK 790

[Close]

BLAST of Cp4.1LG01g09040 vs. TAIR 10
Match: AT1G77030.1 (hydrolases, acting on acid anhydrides, in phosphorus-containing anhydrides;ATP-dependent helicases;nucleic acid binding;ATP binding;RNA binding;helicases )

HSP 1 Score: 1060.1 bits (2740), Expect = 1.1e-309
Identity = 553/768 (72.01%), Postives = 644/768 (83.85%), Query Frame = 0


Query: 183 RREKQQKKAKSGGFESLGLSPNVYRGIKRKGYRVPTPIQRKTMPLILSGNDVVAMARTGS 242
           R+EKQ+KK KSGGFESL L PNV+  IK+KGY+VPTPIQRKTMPLILSG DVVAMARTGS
Sbjct: 17  RKEKQKKKGKSGGFESLNLGPNVFNAIKKKGYKVPTPIQRKTMPLILSGVDVVAMARTGS 76

Query: 243 GKTAAFLVPMLERLKQHEPQGGVRALILSPTRDLALQTLKFTKELGKFTDLRISLLVGGD 302
           GKTAAFL+PMLE+LKQH PQGGVRALILSPTRDLA QTLKFTKELGKFTDLR+SLLVGGD
Sbjct: 77  GKTAAFLIPMLEKLKQHVPQGGVRALILSPTRDLAEQTLKFTKELGKFTDLRVSLLVGGD 136

Query: 303 SMEAQFEELAQNPDIIIATPGRLMHHLSEVDDMTLRTVEYVVFDEADCLFDMGFAEQLHK 362
           SME QFEEL + PD+IIATPGRLMH LSEVDDMTLRTVEYVVFDEAD LF MGFAEQLH+
Sbjct: 137 SMEDQFEELTKGPDVIIATPGRLMHLLSEVDDMTLRTVEYVVFDEADSLFGMGFAEQLHQ 196

Query: 363 ILAQLSENRQTLLFSATLPSVLAEFAKAGLRDPQLVRLDVDNKISPDLKLVFFTLRQEEK 422
           IL QLSENRQTLLFSATLPS LAEFAKAGLR+PQLVRLDV+NKISPDLKL F T+R EEK
Sbjct: 197 ILTQLSENRQTLLFSATLPSALAEFAKAGLREPQLVRLDVENKISPDLKLSFLTVRPEEK 256

Query: 423 NAALLYLVREKISSDEQSLIFVSTRHHVEFLNVLFREEGIEPSVCYGEMDQDARKIHISR 482
            +ALLYLVRE ISSD+Q+LIFVST+HHVEF+N LF+ E IEPSVCYG+MDQDARKIH+SR
Sbjct: 257 YSALLYLVREHISSDQQTLIFVSTKHHVEFVNSLFKLENIEPSVCYGDMDQDARKIHVSR 316

Query: 483 FRARKTMFLIVTDVAARGIDIPLLDNVINWDFPPKPKIFVHRVGRAARAGRTGAAFSFVT 542
           FRARKTM LIVTD+AARGIDIPLLDNVINWDFPP+PKIFVHRVGRAARAGRTG A+SFVT
Sbjct: 317 FRARKTMLLIVTDIAARGIDIPLLDNVINWDFPPRPKIFVHRVGRAARAGRTGCAYSFVT 376

Query: 543 SEDLPNLLDLHLFLSKPIRAAPTEEEVLLDKEGVFSKIDNAIASGETVYGRLPQTVIDLA 602
            ED+P +LDLHLFLSKP+R APTE+EVL + E V +K   AI SG TVYGR PQ  IDL 
Sbjct: 377 PEDMPYMLDLHLFLSKPVRPAPTEDEVLKNMEEVMTKTSQAIDSGVTVYGRFPQKTIDLI 436

Query: 603 SDRIRETIDSSADLISLQKTCSNAFRMYSKSKPLPSKESIRRAKDLPREGLHPIFKNILE 662
            +R RE IDSSA+L SL++T + AFR+YSK+KP PSKESIRRAKDLPREGLHPIF++I+E
Sbjct: 437 FNRTREMIDSSAELDSLERTSTKAFRLYSKTKPSPSKESIRRAKDLPREGLHPIFRSIIE 496

Query: 663 GGELKALAFSERLKTFRPKQTILEAEGETAKSKHRQGPR-QWVDVMKRKRAVHEEVINLV 722
            GEL+A++F +++K FRPKQTILEAEGE AKSKH +GP  QWVDVMK+KRA+HEE+IN  
Sbjct: 497 TGELEAMSFFQKIKNFRPKQTILEAEGEVAKSKHVKGPAGQWVDVMKKKRAIHEEIINTR 556

Query: 723 HKQR---SAKHVEEELPLENISPKGKNMKGTR--GLKKRKTASFKDEEFYINSVPTNHHT 782
           H+Q    S  H+E E         G  ++G++  G K++   +FKD+EF+I+S+P NHH+
Sbjct: 557 HQQNQKTSNNHLEMEAEPTTSFVDG-TVEGSKVSGKKRKAQETFKDDEFFISSIPVNHHS 616

Query: 783 EAGLAVKGDQGFGSNRLDNAVLDLVADDSSGMQKHKSVYHWDKRGKKYVKLNNGDRVTAS 842
           EAGL+++G++GFGSNRLD AVLDLVADD  G+++ +S YHWDK+GKKY+KLNNGDRVTAS
Sbjct: 617 EAGLSLRGNEGFGSNRLDAAVLDLVADDGQGIKQQQSNYHWDKKGKKYIKLNNGDRVTAS 676

Query: 843 GKIKTESGAKVKTNKTGIYKKWKERSHNKISL---KGIRNQRFSGNKRKFGSGKNQHSVP 902
           GKIKTESGAK    KTGIYK+W+ERSH K+S          R SG   + G  + Q SVP
Sbjct: 677 GKIKTESGAKATAKKTGIYKRWQERSHKKVSRDSGDADETTRMSGRGGRDGK-RRQGSVP 736

Query: 903 NAHVRSEVKNLDQIRKERQKKATRIQTMKNQPKRGKK--KSGKKGNRG 940
           NAHVRSE+K+LDQ+RKERQ+KA ++  +  Q KRG +  + G +G RG
Sbjct: 737 NAHVRSEIKDLDQVRKERQQKANKVSYL--QSKRGGRGGRGGARGGRG 780

[Close]

BLAST of Cp4.1LG01g09040 vs. TAIR 10
Match: AT4G22720.1 (Actin-like ATPase superfamily protein )

HSP 1 Score: 355.5 bits (911), Expect = 1.3e-97
Identity = 164/186 (88.17%), Postives = 179/186 (96.24%), Query Frame = 0


Query: 1   MIALGFEGSANKIGVGVVTLDGNILSNPRHTYITPPGHGFLPRETAHHHFEHILPLIKSA 60
           MIA+GFEGSANKIGVG+VTLDG IL+NPRHTYITPPGHGFLPRETAHHH +H+LPL+KSA
Sbjct: 5   MIAIGFEGSANKIGVGIVTLDGTILANPRHTYITPPGHGFLPRETAHHHLDHVLPLVKSA 64

Query: 61  LETAKITPEDIDCLCYTKGPGMGAPLQVSAVAVRVLSQIWNKPIVAVNHCVAHIEMGRIV 120
           LET+++TPE+IDC+CYTKGPGMGAPLQVSA+ VRVLSQ+W KPIVAVNHCVAHIEMGR+V
Sbjct: 65  LETSQVTPEEIDCICYTKGPGMGAPLQVSAIVVRVLSQLWKKPIVAVNHCVAHIEMGRVV 124

Query: 121 TGADDPVVLYVSGGNTQVIAYSEGRYRIFGETIDIAVGNCLDRFARVLTLSNDPSPGYNI 180
           TGADDPVVLYVSGGNTQVIAYSEGRYRIFGETIDIAVGNCLDRFARVL LSNDPSPGYNI
Sbjct: 125 TGADDPVVLYVSGGNTQVIAYSEGRYRIFGETIDIAVGNCLDRFARVLKLSNDPSPGYNI 184

Query: 181 EQRREK 187
           EQ  +K
Sbjct: 185 EQLAKK 190

[Close]

BLAST of Cp4.1LG01g09040 vs. TAIR 10
Match: AT4G22720.2 (Actin-like ATPase superfamily protein )

HSP 1 Score: 355.5 bits (911), Expect = 1.3e-97
Identity = 164/186 (88.17%), Postives = 179/186 (96.24%), Query Frame = 0


Query: 1   MIALGFEGSANKIGVGVVTLDGNILSNPRHTYITPPGHGFLPRETAHHHFEHILPLIKSA 60
           MIA+GFEGSANKIGVG+VTLDG IL+NPRHTYITPPGHGFLPRETAHHH +H+LPL+KSA
Sbjct: 5   MIAIGFEGSANKIGVGIVTLDGTILANPRHTYITPPGHGFLPRETAHHHLDHVLPLVKSA 64

Query: 61  LETAKITPEDIDCLCYTKGPGMGAPLQVSAVAVRVLSQIWNKPIVAVNHCVAHIEMGRIV 120
           LET+++TPE+IDC+CYTKGPGMGAPLQVSA+ VRVLSQ+W KPIVAVNHCVAHIEMGR+V
Sbjct: 65  LETSQVTPEEIDCICYTKGPGMGAPLQVSAIVVRVLSQLWKKPIVAVNHCVAHIEMGRVV 124

Query: 121 TGADDPVVLYVSGGNTQVIAYSEGRYRIFGETIDIAVGNCLDRFARVLTLSNDPSPGYNI 180
           TGADDPVVLYVSGGNTQVIAYSEGRYRIFGETIDIAVGNCLDRFARVL LSNDPSPGYNI
Sbjct: 125 TGADDPVVLYVSGGNTQVIAYSEGRYRIFGETIDIAVGNCLDRFARVLKLSNDPSPGYNI 184

Query: 181 EQRREK 187
           EQ  +K
Sbjct: 185 EQLAKK 190

[Close]

BLAST of Cp4.1LG01g09040 vs. TAIR 10
Match: AT5G60990.1 (DEA(D/H)-box RNA helicase family protein )

HSP 1 Score: 245.7 bits (626), Expect = 1.4e-64
Identity = 140/388 (36.08%), Postives = 224/388 (57.73%), Query Frame = 0


Query: 196 FESLGLSPNVYRGIKRKGYRVPTPIQRKTMPLILSGNDVVAMARTGSGKTAAFLVPMLER 255
           F  LG+   + +  +R G++ P+ IQ + +P  L G DV+ +A+TGSGKT AF +P+L+ 
Sbjct: 11  FAELGVREELVKACERLGWKNPSKIQAEALPFALEGKDVIGLAQTGSGKTGAFAIPILQA 70

Query: 256 LKQH----EPQGGVR------ALILSPTRDLALQTLKFTKELGKFTDLRISLLVGGDSME 315
           L ++    EP+ G R      A +LSPTR+LA+Q  +  + LG    LR ++LVGG    
Sbjct: 71  LLEYVYDSEPKKGRRPDPAFFACVLSPTRELAIQIAEQFEALGADISLRCAVLVGGIDRM 130

Query: 316 AQFEELAQNPDIIIATPGRLMHHLSEVDDMTLRTVEYVVFDEADCLFDMGFAEQLHKILA 375
            Q   L + P +I+ATPGRL  H+S+    +L++++Y+V DEAD L +  F + L++IL 
Sbjct: 131 QQTIALGKRPHVIVATPGRLWDHMSDTKGFSLKSLKYLVLDEADRLLNEDFEKSLNQILE 190

Query: 376 QLSENRQTLLFSATLPSVLAEFAKAGLRDPQLVRLDVDNKIS--PDLKLVFFTLRQEEKN 435
           ++   R+T LFSAT+   + +  +A LR+P  V+++  +K S    LK  +  +  + K+
Sbjct: 191 EIPLERKTFLFSATMTKKVRKLQRACLRNP--VKIEAASKYSTVDTLKQQYRFVAAKYKD 250

Query: 436 AALLYLVREKISSDEQSLIFVSTRHHVEFLNVLFREEGIEPSVCYGEMDQDARKIHISRF 495
             L+Y++ E    +  S+IF  T     FL ++ R  G       G+M Q  R   +++F
Sbjct: 251 CYLVYILSE--MPESTSMIFTRTCDGTRFLALVLRSLGFRAIPISGQMTQSKRLGALNKF 310

Query: 496 RARKTMFLIVTDVAARGIDIPLLDNVINWDFPPKPKIFVHRVGRAARAGRTGAAFSFVTS 555
           +A +   L+ TDVA+RG+DIP +D VIN+D P   K ++HRVGR ARAGR+G   S V  
Sbjct: 311 KAGECNILVCTDVASRGLDIPSVDVVINYDIPTNSKDYIHRVGRTARAGRSGVGISLVNQ 370

Query: 556 EDLPNLLDLHLFLSKPIRAAPTEEEVLL 572
            +L   + +   + K +   P EE+ +L
Sbjct: 371 YELEWYIQIEKLIGKKLPEYPAEEDEVL 394

[Close]

BLAST of Cp4.1LG01g09040 vs. TAIR 10
Match: AT1G16280.1 (RNA helicase 36 )

HSP 1 Score: 231.9 bits (590), Expect = 2.2e-60
Identity = 148/384 (38.54%), Postives = 214/384 (55.73%), Query Frame = 0


Query: 196 FESLGLSPNVYRGIKRKGYRVPTPIQRKTMPLILSGNDVVAMARTGSGKTAAFLVPMLER 255
           FE LGL+       K  G R PTP+Q   +P IL+G DV+ +A+TGSGKTAAF +P+L R
Sbjct: 60  FEGLGLAEWAVETCKELGMRKPTPVQTHCVPKILAGRDVLGLAQTGSGKTAAFALPILHR 119

Query: 256 LKQHEPQGGVRALILSPTRDLALQTLKFTKELGKFTDLRISLLVGGDSMEAQFEELAQNP 315
           L   E   GV AL+++PTR+LA Q  +  K LG   +LR S++VGG  M  Q   L   P
Sbjct: 120 LA--EDPYGVFALVVTPTRELAFQLAEQFKALGSCLNLRCSVIVGGMDMLTQTMSLVSRP 179

Query: 316 DIIIATPGR---LMHHLSEVDDMTLRTVEYVVFDEADCLFDMGFAEQLHKILAQLSENRQ 375
            I+I TPGR   L+ +  +V  +  RT +++V DEAD + D+GF ++L  I   L ++RQ
Sbjct: 180 HIVITTPGRIKVLLENNPDVPPVFSRT-KFLVLDEADRVLDVGFQDELRTIFQCLPKSRQ 239

Query: 376 TLLFSATLPSVLAEFAKAGLRDPQLVRLDVDNKISPDLKLVFFTLRQEEKNAALLYLVRE 435
           TLLFSAT+ S L    +               K    L   F     E+K+A  LYLV  
Sbjct: 240 TLLFSATMTSNLQALLEHSSNKAYFYEAYEGLKTVDTLTQQFIF---EDKDAKELYLVHI 299

Query: 436 KISSDEQ----SLIFVSTRHHVEFLNVLFREEGIEPSVCYGEMDQDARKIHISRFRARKT 495
               +++    ++IFVST    + L+++  E  +E    +    Q  R   +S+F++ K 
Sbjct: 300 LSQMEDKGIRSAMIFVSTCRTCQRLSLMLDELEVENIAMHSLNSQSMRLSALSKFKSGKV 359

Query: 496 MFLIVTDVAARGIDIPLLDNVINWDFPPKPKIFVHRVGRAARAGRTGAAFSFVTSEDLPN 555
             L+ TDVA+RG+DIP +D VIN+D P  P+ +VHRVGR ARAGR G A S +T  D+  
Sbjct: 360 PILLATDVASRGLDIPTVDLVINYDIPRDPRDYVHRVGRTARAGRGGLAVSIITETDVKL 419

Query: 556 LLDLHLFLSKPIRAAPTEEEVLLD 573
           +  +   + K  +  P  ++V+ D
Sbjct: 420 IHKIEEEVGK--KMEPYNKKVITD 435

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g09040 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O49289	1.5e-308	72.01	Putative DEAD-box ATP-dependent RNA helicase 29 OS=Arabidopsis thaliana OX=3702 ...	[more]
A2YV85	1.2e-286	65.94	DEAD-box ATP-dependent RNA helicase 29 OS=Oryza sativa subsp. indica OX=39946 GN...	[more]
A3BT52	1.4e-285	65.68	DEAD-box ATP-dependent RNA helicase 29 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q8K4L0	2.2e-166	45.14	ATP-dependent RNA helicase DDX54 OS=Mus musculus OX=10090 GN=Ddx54 PE=1 SV=1	[more]
Q8TDD1	7.2e-162	43.08	ATP-dependent RNA helicase DDX54 OS=Homo sapiens OX=9606 GN=DDX54 PE=1 SV=2	[more]

BLAST of Cp4.1LG01g09040 vs. NCBI nr


Match Name	Identity	Description
XP_023537507.1	98.06	putative DEAD-box ATP-dependent RNA helicase 29 isoform X2 [Cucurbita pepo subsp...	[more]
XP_023537498.1	97.81	putative DEAD-box ATP-dependent RNA helicase 29 isoform X1 [Cucurbita pepo subsp...	[more]
KAG7031303.1	98.82	putative DEAD-box ATP-dependent RNA helicase 29 [Cucurbita argyrosperma subsp. a...	[more]
XP_022942470.1	97.42	putative DEAD-box ATP-dependent RNA helicase 29 isoform X2 [Cucurbita moschata]	[more]
XP_022942469.1	97.16	putative DEAD-box ATP-dependent RNA helicase 29 isoform X1 [Cucurbita moschata]	[more]

BLAST of Cp4.1LG01g09040 vs. ExPASy TrEMBL


Match Name	Identity	Description
A0A6J1FWD3	97.42	RNA helicase OS=Cucurbita moschata OX=3662 GN=LOC111447496 PE=3 SV=1	[more]
A0A6J1FRF0	97.16	RNA helicase OS=Cucurbita moschata OX=3662 GN=LOC111447496 PE=3 SV=1	[more]
A0A6J1INZ1	97.03	RNA helicase OS=Cucurbita maxima OX=3661 GN=LOC111478139 PE=3 SV=1	[more]
A0A6J1ILN0	96.78	RNA helicase OS=Cucurbita maxima OX=3661 GN=LOC111478139 PE=3 SV=1	[more]
A0A0A0M3G2	91.23	RNA helicase OS=Cucumis sativus OX=3659 GN=Csa_1G688130 PE=3 SV=1	[more]

BLAST of Cp4.1LG01g09040 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G77030.1	1.1e-309	72.01	hydrolases, acting on acid anhydrides, in phosphorus-containing anhydrides;ATP-d...	[more]
AT4G22720.1	1.3e-97	88.17	Actin-like ATPase superfamily protein	[more]
AT4G22720.2	1.3e-97	88.17	Actin-like ATPase superfamily protein	[more]
AT5G60990.1	1.4e-64	36.08	DEA(D/H)-box RNA helicase family protein	[more]
AT1G16280.1	2.2e-60	38.54	RNA helicase 36	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 904..924
None	No IPR available	GENE3D	3.30.420.40		coord: 1..160 e-value: 2.1E-36 score: 127.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 923..942
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 873..896
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 873..942
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 175..196
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 901..917
None	No IPR available	PANTHER	PTHR47959:SF8	DEAD-BOX ATP-DEPENDENT RNA HELICASE 29	coord: 182..937
None	No IPR available	PANTHER	PTHR47959	ATP-DEPENDENT RNA HELICASE RHLE-RELATED	coord: 182..937
None	No IPR available	CDD	cd17959	DEADc_DDX54	coord: 194..399 e-value: 2.22847E-139 score: 412.083
None	No IPR available	CDD	cd00012	NBD_sugar-kinase_HSP70_actin	coord: 4..172 e-value: 8.40801E-7 score: 48.3539
None	No IPR available	CDD	cd18787	SF2_C_DEAD	coord: 410..525 e-value: 8.26613E-33 score: 121.46
IPR017861	Kae1/TsaD family	PRINTS	PR00789	OSIALOPTASE	coord: 127..139 score: 57.19 coord: 4..17 score: 44.41 coord: 95..114 score: 43.04 coord: 74..94 score: 36.44 coord: 149..170 score: 50.4
IPR014001	Helicase superfamily 1/2, ATP-binding domain	SMART	SM00487	ultradead3	coord: 213..413 e-value: 3.2E-59 score: 212.7
IPR014001	Helicase superfamily 1/2, ATP-binding domain	PROSITE	PS51192	HELICASE_ATP_BIND_1	coord: 225..398 score: 31.879955
IPR001650	Helicase, C-terminal	SMART	SM00490	helicmild6	coord: 451..532 e-value: 1.7E-22 score: 90.7
IPR001650	Helicase, C-terminal	PFAM	PF00271	Helicase_C	coord: 422..532 e-value: 4.1E-24 score: 85.0
IPR001650	Helicase, C-terminal	PROSITE	PS51194	HELICASE_CTER	coord: 421..571 score: 18.929096
IPR012541	DBP10, C-terminal	SMART	SM01123	DBP10CT_2	coord: 799..861 e-value: 3.6E-23 score: 93.0
IPR012541	DBP10, C-terminal	PFAM	PF08147	DBP10CT	coord: 799..860 e-value: 3.0E-14 score: 53.0
IPR000905	Gcp-like domain	PFAM	PF00814	TsaD	coord: 26..209 e-value: 3.2E-51 score: 174.6
IPR011545	DEAD/DEAH box helicase domain	PFAM	PF00270	DEAD	coord: 218..384 e-value: 2.7E-50 score: 170.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 175..399 e-value: 4.3E-78 score: 264.1
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 400..569 e-value: 1.8E-38 score: 133.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 264..549
IPR014014	RNA helicase, DEAD-box type, Q motif	PROSITE	PS51195	Q_MOTIF	coord: 194..222 score: 11.176648
IPR043129	ATPase, nucleotide binding domain	SUPERFAMILY	53067	Actin-like ATPase domain	coord: 3..121

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g09040.1	Cp4.1LG01g09040.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006364	rRNA processing
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016887	ATP hydrolysis activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003724	RNA helicase activity
molecular_function	GO:0003676	nucleic acid binding