Cp4.1LG01g08930 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG01g08930
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionUnknown protein
LocationCp4.1LG01: 4548293 .. 4554005 (-)
RNA-Seq ExpressionCp4.1LG01g08930
SyntenyCp4.1LG01g08930
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGTAGTCATCAACGTATTCGGTTTTGCATCTGCATGGGCAACACTCCACGTCCGAGGAGCATAACAAGGTAGGACAACTGTTCTTGAATCCAACAGATTTGAACATCTTCCTGGAGCAACCATAATTCAAGTGGTTTTCATTTTGTTGTGAAGGGAGTTGGATGATCTCATTGTCCACCGCAGACTGAACCACACTGGACATGGACATTAGCATCATGCATAACATTGCCACCACCAAACCAACCTTCTTCATCTCCATCTCTTATACTTTTCTCTCTTGCTCTTGCTCCTTCCCATCACACCACTTCTCTATTTATTGTATGGATTTAAGGGATAAGGGTGCAAAATCTACACTAGTACGTACACGAGTGGATAAGAATGAACGAAAAATGTGATCCAAAACAATATAATCAATCGGTGTTACTACGCTCCCTATAATTAATGAATAGAACAAAATAAAATAAATATAAAAAAATCTGTCAAATAGGGGCAAATGGGTCATTTTGCCCTCCGCCCATGATGGGGTCTTGACTGGCCTTGAAAGAAAAAGTGAGAGAAAGTTGAGAGAAGTGGAAGAGAGAAGAAAGAAGGAGCCACCGAAAAACTCACTGGAAACTAAGTCGGGGTTCATTCCGGCCAAGACTATGATGCAGGAGTCTTCCTTGAAAGGAAAGAGAAGATTCGAGTGGTTAGAGTTCCATAAGAGCTATTTTTATTTTATTGGATTTTTTTTTTCTTTTATTCTACTCTAACGAGTTAAATTTTCAGATAGGCGGGTCATGACATCCAAGCTCACCCTAACGAGTAAATTTTCAGATAGGCCTCACGAAAAGATACATTTCCTACAGTGCATATCCTTGATCTAAGTAGAGCACATGAAGGCTTAAGGCACCTGTTGGTTTGCGTAGGGAGAACCTTCATGTGATTTTTGCTGGAGAAGCTCCAAGTAAACGGTCAATCTGTTACCACGGAGGGATCAAGCTTTTACAACAAGATTGCTTTTACAACAAGATGGAGAATCTCACTAACTAAAATAGAGATAGGAAATGATATGAATTAAGGTATAGAGATAGGAAATGATATGAATTATGGTATCTCAATAATCGTTAAAATAGAGATAGGAAATGATATGAATTAAGGTATAGAGATAGGAAATGATATGAATTATGGTATCTCAATAATCGTCAATAATCGTGAAGAATGTTGTTCAAATTAAAGTCAAAGTCATATTAAGTAAAATCAAGTTTCATTAAACTTGAATTCAAGTTGTGGTAATCATTTCTCGACTTTCGTTTCCTTTTCCTTTAGTTCTGTGGAGTTTCTCGAGTACTATGTTTTGTAAATAGTTCAAAATGATTTGTGAAGAAGTCTGATCTTGAAAACATCAAATATGTCTATCGTTTACAGCCTGCAGCATGTACAAGAAAATTCCTCCTGCAACTGAGACGTTGAGGGACTCGAAACCACCCGCCATTGGAATGCTCAAAAGCTCACAAACCTGCCAACATTTCTCAGATAGACCACTCCCTTCACTCCCCAAAACCAAGCACAATGGGATATCTTTCGAAGAATTCGCGAACTGTTGCGAAAGGACCGATACAGGCTTCAGTTCATTACTTTCGGGATGTCCAGCCAACATTTTCATTTGGAATTCGGTTTTTAGAGCCTCAAGATGATTCCAAGTGCCAGACACTATTGGAAGCTGAAAAGATGCTCCTCGTGAGGCTCGGAGTGCCTTCTCGTTGAATGGATCACAACACCCAGGAAGCAGAAAAACACCGTTCTGTTTGGCATACCCAAATATGTATCAGAAAACTTATTTGATATACCCAAATGCTTCATCATACTTCAAAAAATTGCAGTCTTAGACATGGTATGTCATGTATAATCCTTCAGGCAATTTTGAACCAATCAGCATTCATTGAAAATTGGGTTCAAAGAAGGATTATTCAAACCAATAACCTTACCCATTTGAAGGCCAAAGCAGACCTGATTAATGTACCAAGATTGCCCGGGTCCTGCAATAAGCAAAGATGAACCTTTAAATGTCATGTTCACATATCGGTACTAAATCAATGAAATAATCTATAATACGTTATAACATCAAATGTTAAGCATTAAAAGTTCTTTTCAAAGCCTTAAAGATAGATTAAGAAGACCATAGCTACAGAGAAACTATTGGCATGTCAATGTGCATAGGTAAATACCAGAAGTGGCATTTGAGAGATAGCTTAACACAATGTAGCAAGTTATCTCAGCAGTAACTATAGAATGAAATGCAGGAAATGATAACTATTTTGAAACAACTTAGAGACAGGACAACTAGATGCACCAAATTACAGGACTTGAGTCGATTCCAGATAAAATAATTACCTGGATTCCTTCAAGGACTAGTATTCGATGTGGAGATGGAAACCATCTTTTACAATGTGCTTGTTTTAAATTGCCATCTAAACTATAAAAACTGTCAGGTATTCTCATGAGGGCAATTGCATCAATAGATTCTGTTGATTGCATTCCAGAAAGCTTTTTCATCACAGTTGGGCTCACCTGCACGACACGAACAGAGACATCGACAAGTTCTTCAGGAATCTCAACTTCATCTAGCAGAAGTAGGCACTCCAATGTACAACTTATCCCACGCAGAGTCTCTTGAAACTTGCATATTTCTCTGTAAATGACTAAGATTAGATGTATGTGCATACAAACCTTGTAAAGTCGAGCAAAATATTTACCTCAAAGAATGACCACATGAGAAATTGAACTAACACAAGACAGAAGTAGAATTCCCAAGATCCGGGGGGTGGGGGAGCTAGCAAATTCCTCATGGGGAAACATTACATAAATTTTTTAATGCTCCAATTAGGATTGAATTCAAATGACTGGAAAGCACTTATTCTATACAACTCCAACAATTTATACTTTATAGCTGAATCAGAGAACAGCCACAAGCAAATAAAACTCTGAACGAAGCTTAAGGGTGCTTCAAAAACATTCAGTCACATGCTTGCTATTACATTAGACCTGATTCCAAGAACTTAATTCTTCAGAAACTGAAATGGGCCAATTATAAAACTACTCATATCAAACCGACATTTCAGGAGAAACTCACAGAACAACCTTCATCTTTACTTCGGAAAAACAATCAACGAAGGAAGGGAATCGGTTAACCCATACGACAAATGTNTTTTGCTGGAGAAGCTCCAAGTAAACGGTCAATCTGTTACCATGGAGGGATCAAGCTTTTACAACAAGATTGCTTTTACAACAAGATGGAGAATCTCGCTAACTAAAATAGAGATAGGAAATGATATGAATTAAGGTATCTCAATTGAATAATATGATTGNATCGTTAAAATAGAGATAGGAAATGATATGAATTAAGGTATAGAGATAGGAAATGATATGAATTATGGTATCTCAATAATCGTCAATAATCGTGAAGAATGTTGTTCAAATTAAAGTCAAAGTCATATTAAGTAAAATCAAGTTTCATTAAACTTGAATTCAAGTTGTGGTAATCATTTCTCGACTTTCGTTTCCTTTTCCTTTAGTTCTGTGGAGTTTCTCGAGTACTATGTTTTGTAAATAGTTCAAAATGATTTGTGAAGAAGTCTGATCTTGAAAACATCAAATATGTCTATCGTTTACAGCCTGCAGCATGTACAAGAAAATTCCTCCTGCAACTGAGACGTTGAGGGACTCGAAACCACCCGCCATTGGAATGCTCAAAAGCTCACAAACCTGCCAACATTTCTCAGATAGACCACTCCCTTCACTCCCCAAAACCAAGCACAATGGGATATCTTTCGAAGAATTCGCGAACTGTTGCGAAAGGACCGATACAGGCTTCAGTTCATTACTTTCGGGATGTCCAGCCAACATTTTCATTTGGAATTCGGNTATAATGTCTGGATGCTCCTAAAGGCTTAAACGTACAAAATAAAGTTTGTGTGGGGAATTTAAAACTGAAGGGAAGGCTGACAAAAAGTTGGAAGAGGCATTTGTTTGGGTAGATTAGGCATTGCCTCTTCAAAACTAAGAACTTGANATATGTATCAGAAAACTTATTTGATATACCCAAATGCTTCATCATACTTCAAAAAATTGCAGTCTTAGACATGGTATGTCATGTATAATCCTTCAGGCAATTTTGAACCAATCAGCATTCATTGAAAATTGGGTTCAAAGAAGGATTATTCAAACCAATAACCTTACCCATTTGAAGGCCAAAGCAGACCTGATTAATGTACCAAGATTGCCCGGGTCCTGCAATAAGCAAAGATGAACCTTTAAATGTCATGTTCACATATCGGTACTAAATCAATGAAATAATCTATAATACGTTATAACATCAAATGTTAAGCATTAAAAGTTCTTTTCAAAGCCTTAAAGATAGATTAAGAAGACCATAGCTACAGAGAAACTATTGGCATGTCAATGTGCATAGGTAAATACCAGAAGTGGCATTTGAGAGATAGCTTAACACAATGTAGCAAGTTATCTCAGCAGTAACTATAGAATGAAATGCAGGAAATGATAACTATTTTGAAACAACTTAGAGACAGGACAACTAGATGCACCAAATTACAGGACTTGAGTCGATTCCAGATAAAATAATTACCTGGATTCCCTCAAGGACTAGTATTCGATGTGGAGATGGAAACCATCTTTTACAATGTGCTTGTTTTAAATTGCCATCTAAACTATAAAAACTGTCAGGTATTCTCATGAGGGCAATTGCATCAATAGATTCTGTTGATTGCATTCCAGAAAGCTTTTTCATCACAGTTGGGCTCACCTGCACGACACGAACAGAGACATCGACAAGTTCTTCAGGAATCTCAACTTCATCTAGCAGAAGTAGGCACTCCAATGTACAACTTATCCCACGCAGAGTCTCTTGAAACTTGCATATTTCTCTGTAAATGACTAAGATTAGATGTATGTGCATACAAACCTTGTAAAGTCGAGCAAAATATTTACCTCAAAGAATGACCACATGAGAAATTGAACTAACACAAGACAGAAGTAGAATTCCCAAGATCCGGGGGGTGGGGGAGCTAGCAAATTCCTCATGGGGAAACATTACATAAATTTTTTAATGCTCCAATTAGGATTGAATTCAAATGACTGGAAAGCACTTATTCTATACAACTCCAACAATTTATCCTTTATAGCTGAATCAGAGAACAGCCACAAGCAAATAAAACTCTGAACGAAGCTTAAGGGTGCTTCAAAAACATTCAGTCACATGCTTGCTATTACATTAGACCTGATTCCAAGAACTTAATTCTTCAGAAACTGAAATAACTACTCATATCAAACCGACATTTCGGGAGAAACTCACAAAACAACTTTCATCTTTACTTCGGAAAAATAATAAACAAGAAGGGAATTGCTTAATCCATACGATAAATTTGCAAAAATATTCAAGGATTTAGAGTTTCCTTTTTGATGAAATGTATCAACAAAAAGAATTCAAAAGGCAAAACCGTGCATAGACGAATTTGATTTTTTTAATTGAAGAACAAAACTATGGACAGACGTAGAAAGTAAAGCGTTAAGAGGCGACCTAATTGGGGTAGCGCCGACGACGATGACGGAGCCATGGAAGTGGCGATAAGAGGAACTGAAGCGGAGTTTAACGCAATGCTTGACGAAGGGGTTGGAGGTGCTGGTGATGGCTTTCACATGAGAAGGAAGTGA

mRNA sequence

ATGGGCATGTACAAGAAAATTCCTCCTGCAACTGAGACGTTGAGGGACTCGAAACCACCCGCCATTGGAATGCTCAAAAGCTCACAAACCTGCCAACATTTCTCAGATAGACCACTCCCTTCACTCCCCAAAACCAAGCACAATGGGATATCTTTCGAAGAATTCGCGAACTGTTGCGAAAGGACCGATACAGGCTTCAATGATTCCAAGTGCCAGACACTATTGGAAGCTGAAAAGATGCTCCTCGTGAGGCTCGGAGTGCCTTCTCCCTGCAGCATGTACAAGAAAATTCCTCCTGCAACTGAGACGTTGAGGGACTCGAAACCACCCGCCATTGGAATGCTCAAAAGCTCACAAACCTGCCAACATTTCTCAGATAGACCACTCCCTTCACTCCCCAAAACCAAGCACAATGGGATATCTTTCGAAGAATTCGCGAACTGTTGCGAAAGGACCGATACAGGCTTCATCTTAGACATGAAAGCTTTTTCATCACAGTTGGGCTCACCTGCACGACACGAACAGAGACATCGACAAGTTCTTCAGGAATCTCAACTTCATCTAGCAGAAGTAGGCACTCCAATCGTTAAGAGGCGACCTAATTGGGGTAGCGCCGACGACGATGACGGAGCCATGGAAGTGGCGATAAGAGGAACTGAAGCGGAGTTTAACGCAATGCTTGACGAAGGGGTTGGAGGTGCTGGTGATGGCTTTCACATGAGAAGGAAGTGA

Coding sequence (CDS)

ATGGGCATGTACAAGAAAATTCCTCCTGCAACTGAGACGTTGAGGGACTCGAAACCACCCGCCATTGGAATGCTCAAAAGCTCACAAACCTGCCAACATTTCTCAGATAGACCACTCCCTTCACTCCCCAAAACCAAGCACAATGGGATATCTTTCGAAGAATTCGCGAACTGTTGCGAAAGGACCGATACAGGCTTCAATGATTCCAAGTGCCAGACACTATTGGAAGCTGAAAAGATGCTCCTCGTGAGGCTCGGAGTGCCTTCTCCCTGCAGCATGTACAAGAAAATTCCTCCTGCAACTGAGACGTTGAGGGACTCGAAACCACCCGCCATTGGAATGCTCAAAAGCTCACAAACCTGCCAACATTTCTCAGATAGACCACTCCCTTCACTCCCCAAAACCAAGCACAATGGGATATCTTTCGAAGAATTCGCGAACTGTTGCGAAAGGACCGATACAGGCTTCATCTTAGACATGAAAGCTTTTTCATCACAGTTGGGCTCACCTGCACGACACGAACAGAGACATCGACAAGTTCTTCAGGAATCTCAACTTCATCTAGCAGAAGTAGGCACTCCAATCGTTAAGAGGCGACCTAATTGGGGTAGCGCCGACGACGATGACGGAGCCATGGAAGTGGCGATAAGAGGAACTGAAGCGGAGTTTAACGCAATGCTTGACGAAGGGGTTGGAGGTGCTGGTGATGGCTTTCACATGAGAAGGAAGTGA

Protein sequence

MGMYKKIPPATETLRDSKPPAIGMLKSSQTCQHFSDRPLPSLPKTKHNGISFEEFANCCERTDTGFNDSKCQTLLEAEKMLLVRLGVPSPCSMYKKIPPATETLRDSKPPAIGMLKSSQTCQHFSDRPLPSLPKTKHNGISFEEFANCCERTDTGFILDMKAFSSQLGSPARHEQRHRQVLQESQLHLAEVGTPIVKRRPNWGSADDDDGAMEVAIRGTEAEFNAMLDEGVGGAGDGFHMRRK
Homology
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BLAST of Cp4.1LG01g08930 vs. ExPASy TrEMBL
Match: A0A0A0L3H4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G115070 PE=4 SV=1)

HSP 1 Score: 144 bits (363), Expect = 9.79e-41
Identity = 73/87 (83.91%), Postives = 76/87 (87.36%), Query Frame = 0 

Query: 3  MYKKIPPATETLRDSKPPAIGMLKSSQTCQHFSDRPLPSLPKTKHNGISFEEFANCCERT 62
          MYKKIPPATETLRDSKPPAIGMLKSSQTCQ FSDRPLPS PKTKHNG SF+EF NC ERT
Sbjct: 1  MYKKIPPATETLRDSKPPAIGMLKSSQTCQDFSDRPLPSQPKTKHNGKSFKEFENCWERT 60

Query: 63 DTGFNDSKCQTLLEAEKMLLVRLGVPS 89
          DT  +DSKCQ LLEAEKML  +L VPS
Sbjct: 61 DT--DDSKCQKLLEAEKMLHAKLEVPS 85

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g08930 vs.
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG01g08930 vs.
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG01g08930 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L3H49.79e-4183.91Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G115070 PE=4 SV=1[more]
BLAST of Cp4.1LG01g08930 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g08930.1Cp4.1LG01g08930.1mRNA