Cp4.1LG01g08840 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGAGGTAATGAGTTCTTTTCATGAGTGGAATGCTGCATCAACCTTAACTTGATATCCAATGTTACGTTTTTTATATTATTTATCATTTTTATATTACAGTTATTATTACGGTGACAACCTCTTCCAATTAAAATCTTACAATTTTGAAATCATGTTATGTTCAACTTCTACTTAGTCACCCCAGTTCTTCTACTGAATGAATGAGATGATTTCACTATATGACATGGACGGGCAGTTGAAAGTGGTCCTCCAATATTGACTTTCTGGACACCCTCAGTTCTAAATATGGAGGTTAACCTTGATTGGCATCTTGAGGGATGTCATGTTGGCTGACTATCCTGTCGTTGATCACATTACCTTTTTTTCTTTTAATTGTTACTTTGTAGCTGAAAATATCTGATAGAGTAATACAAGTTTTCTTGAGTTTAATTTGAGATGTATTGAGGATTAAAGAAAGAATTTCTTATATTTGTCCGAGACAATTCTTGTCATGCTTATAGAGAAGGAGAACCTGTGTCTCTATGGACTTCCAAATGAAACGTGGGAAGTTAACTTGCCTGTGGAGGAGGTGCCCCCTGAGCTCCCGGAACCAGCATTAGGCATAAACTTTGCGAGGGATGGGATGCAGGAGAAAGATTGGTTATCGCTGGTTGCAGTTCACAGTGATTCATGGTTGCTTGCTGTTGCATTCTATTTTGGTGCTCGTTTTGGATTTGGGAAGAATGAAAGGTTTGCAACATTACTTTTGTGACCATTATGAATTCTTTATAAGACATTTTTCAGCATTAATGCTGCTGTCTTTTTACTTTTATAAATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAAAATTCAAAAGAAATAAAAGAAATTTGGCTCTGCTTCACCACACATATCTTTCTCTTTTCAATGTAATAAGGACAATTTTACATTTAACTGTGAATGGAGATAGAGAATGAGGTTTCACTAGTTGTTCATGTTCTAGCGTGTCACGTCTGAACATTTTTTTTTTTGGAAAAACAGTGTAGTGGAGGGGCTTTAACAATGCTTCATACTCATAAGGCTCAAATTATTTTGTATGATAAGTTACTCCTCCGTATTTATTTGTTTACTTTAGGATGTGTCTGTGTGTTGGGGGGCTCTAACAAAATAACCAGAAGTGTGCTTTCACAAAATCTAGCAGTCAACAGATGATCTTTCAGAAGAACTCCTGGAACTTTTTATATCTTTTCATTCTTAATGAAAAGTTTGTTTATCGTTTTAAAAAAATTACTTGTTCAGAGTTGAGTGTGAACTTTGTTTGTTTCAAGTTGGATCTATGTATATGTTTTTTCCCCTGTTGTTGATGCAACTATATTTTTTCTCCAAGTAGACAGGAGTCTGTGGTTTGAATTGTTTGGATAACTGTATCCTTGCCCTTGAATGCTCTGTTGTTCTTGGTTCTTCCAGTTTAAGATGGGGGTTTACTCATTTTTAGATTTGAAAATACTTGGTTAACTTCAAGTTATCCTCTAGTTTTACCAATTTTATGCATATTTATTTGTTTAGTTCTAGCATTTTCCTCTTATTAAAAAGAAAGCTTTAGTATCCTGGGAAAGGTCTCTTGCAGGAGTGGTTAGTATCTTCAACATCGAGTCAACTTGCAGTCCACTTTGCTTATCTTTTATTATTATTTTCTTCAGAGAAAAATTATACCCATTTTTTACCATGCTATCATTTCAACAATTCTTTAGTGCATTGTATTGCATGTGCTTTTTGATGCTCATAATCTCGGGTTTGTTTCATGACCTCAATGATTTTTTTCAAGGAAACCTTGTAGTCTCTGCTGTGCTGTCTCATTTTGTCACTTGCTTTAACTAGCTAATTAAGACATGCATTACACGTGACATAAACCATTATTTATAAATAGTTAACCAGTTATCTATAGAGGTAGGCTAGGCATATGAAAATGATTTTCAAGTTTCTTATTATGTTGACTCTCTTTTGAAAATAGCTTAAACTAAATCCAGTTCTAGCTTGAGAATCACTGAAACATATTAGCACTTTAACATACATGTCTTTGTCGTGATCATATCATATATTTTAAAATTTGTTCATGTTATGCCTATGCCCATGCTTCTTTCGGTAAAAATACCTAAACTTTCTTTAATGGATTCTGAATAAGTCAAATCTAAGCTATTCCTTGGTGTGCATGTACTTCTTTCTCTTTCTTATCTTTTCTTACTCTTTTTCTCAAAAAAATCTGAATGATGCTACAAGAAGGAATGGAATTACACGATTAAGGTCTGGCATCCTTTTGTACTGTGCATCACTCATTTTAGACTATAAGTGTTGACAAAGAGGAGAAATTTATTATTTCTTAATGAAGTTTTAGGTGAACTTTTTATATTCTTACAGAGTCACAGTCAAAATTATTAGAGTATAGGTTTAGGGGCTTAATGATCATTACAGAAGTAATGTTTACCTCTAGTTCAGCCCAATACTTGATATAAGCGGCTGAGTGAGAGAAGCCTTACGAAAAATTTTGACCTGTCTGTGTCATTGTTGCTTGAACCTGGTGGTTTTTGAAATTGTGAAGGTTTTTATTCTCGAAATTATTGTAAAGTTGTAACTTGTAGACACATTAAGTTTCTATGTTCTACGGATGTCAGGAAATTTACGGGATCCTTGTGACGTCTTTAAGCATGTTTTGATTTTGATCTCACTTTTGCTATGTCGTATTCATTTGGATTCCTTCTCATCTACTAAGGTCATCTGCTTCAGTGGAATAATAAGCTATTTTTTATTTTAGTTGGATTTCTGTTCAATGTCTTCTGGCATAGTCATTTTCACCATATGGTAATGGCAATAATGTAGATGAAACGTGTTGTGTTTAGGAAAGTAGGGGAAATATCCAGAAAATTCCTCCATCGTTAATGGAGATAATTGTGGTCTTTATTTCTGAAAATTTGATTTCCTTTATGCCAATACTGTATTTTCGTCATGGTATTAGACAGACATGACTCAGATTGAGATTGGACATTGCAGGAAGAGGCTATTCCAGATGATCAACGATCTCCCAAGTGTATTTGAAGTTGTAAGTGGAAATGGTAAGCAGTCAAAAGAACAGTCTGCCACTCATAACAATAGCAGCAAAAGCAAATCGGGTGGGAAGATGGTAAGCAATTTCCGAAGTTCATAATTAGTTGAACATTATTCTTCTGTTCTTTTGCTGCAACCTCATGCCATACATAAATCCTGCTGTTCTTTTCTGTCTTTTAGCAGTCTAGGCAATTGGAGTCCCATAGCAAGGGAGTGAAGATGTCTCCACCACCAAAAGAGGATGAAGATAGCGGGGAAGACGAGGAGGAAGAAGAAGATGATGAACAGGGTGCAACATGTGGGGCTTGTGGGGACAACTACGGCAACGATGAATTCTGGATTTGTTGTGATGTATGTGAAAGATGGTTCCATGGAAAGTGTGTGAAGATTACACCTGCCAAGGCCGAGCATATCAAACAATACAAGTGTCCAAGTTGCAGTAACAAGAGAGCAAGGGTTTGAATTTAGGATCTGAAAGTTGAAGATAGTTGCAGGGAACGAAAAAAAGGGAGAAAAAGAAAAGGAAAAAAAAAAAAAACGAAGAAAGCAGGCAGCACGACGACTCCGAGACTTGTGTTATTACTACGATTATAAAGCTAAAATATGGTGTTGTTAAAGTCAGTTGACAGATTTGGTGAATTGGGATGGAATTTCAAGTTTTCCTACTTGTGTTATTCTTCTGTCTAATTCTAGAATTAGTGGTTTTCTCTTTGAATAGTTATGAATATTTGTCATCCACATCCCAAATTGAATCAGACTCAGAAACAACCTCTTGTTCATGTTTTTTTTTTCCTATTAAATGCCTGTAGAAGAACTGGATAGGTAGAGTGGTGGATCATGGTTTTTAATGTGTTCTTCAACCAGGCTGGCTATTGAAGGAGGAGGACCTAGAATGACAGTGATTTGGATCTGCCTTTATGCTTGTTGGTTGAAGGGGCTGAGGTTGAAATTTCTGTTTATGTGTAAGAAGTTTGAGGCAATTTGGATGAGAGAAAGAGAGAGAGGAAAATGGATACATTTAGAGATGTCTGTAAGTGTTTGTTTGTTTGTTTGTTGGTTTGGATGATTTAATATCATCTCTAACAAACGTAAGAAGACAATGGGGCGATGTCAAGTCAAGTCCTGCTTTGTTTTGTTTCGTTTGGTGAATGCTTGTCTGCAAGGTGTGACTATTGAGGCTTTTTTGCTCATTAATTTCTGCATCTATCAAACTTCAGGCACACACCTTGTGGCCTCTGCTGCTGTGTCTTCTTCTGTC TGAGGTAATGAGTTCTTTTCATGAGTGGAATGCTGCATCAACCTTAACTTGATATCCAATGTTACGTTTTTTATATTATTTATCATTTTTATATTACAGTTATTATTACGGTGACAACCTCTTCCAATTAAAATCTTACAATTTTGAAATCATGTTATGTTCAACTTCTACTTAGTCACCCCAGTTCTTCTACTGAATGAATGAGATGATTTCACTATATGACATGGACGGGCAGTTGAAAGTGGTCCTCCAATATTGACTTTCTGGACACCCTCAGTTCTAAATATGGAGGTTAACCTTGATTGGCATCTTGAGGGATGTCATGTTGGCTGACTATCCTGTCGTTGATCACATTACCTTTTTTTCTTTTAATTGTTACTTTGTAGCTGAAAATATCTGATAGAGTAATACAAGTTTTCTTGAGTTTAATTTGAGATGTATTGAGGATTAAAGAAAGAATTTCTTATATTTGTCCGAGACAATTCTTGTCATGCTTATAGAGAAGGAGAACCTGTGTCTCTATGGACTTCCAAATGAAACGTGGGAAGTTAACTTGCCTGTGGAGGAGGTGCCCCCTGAGCTCCCGGAACCAGCATTAGGCATAAACTTTGCGAGGGATGGGATGCAGGAGAAAGATTGGTTATCGCTGGTTGCAGTTCACAGTGATTCATGGTTGCTTGCTGTTGCATTCTATTTTGGTGCTCGTTTTGGATTTGGGAAGAATGAAAGGAAGAGGCTATTCCAGATGATCAACGATCTCCCAAGTGTATTTGAAGTTGTAAGTGGAAATGGTAAGCAGTCAAAAGAACAGTCTGCCACTCATAACAATAGCAGCAAAAGCAAATCGGGTGGGAAGATGTCTAGGCAATTGGAGTCCCATAGCAAGGGAGTGAAGATGTCTCCACCACCAAAAGAGGATGAAGATAGCGGGGAAGACGAGGAGGAAGAAGAAGATGATGAACAGGGTGCAACATGTGGGGCTTGTGGGGACAACTACGGCAACGATGAATTCTGGATTTGTTGTGATGTATGTGAAAGATGGTTCCATGGAAAGTGTGTGAAGATTACACCTGCCAAGGCCGAGCATATCAAACAATACAAGTGTCCAAGTTGCAGTAACAAGAGAGCAAGGGTTTGAATTTAGGATCTGAAAGTTGAAGATAGTTGCAGGGAACGAAAAAAAGGGAGAAAAAGAAAAGGAAAAAAAAAAAAAACGAAGAAAGCAGGCAGCACGACGACTCCGAGACTTGTGTTATTACTACGATTATAAAGCTAAAATATGGTGTTGTTAAAGTCAGTTGACAGATTTGGTGAATTGGGATGGAATTTCAAGTTTTCCTACTTGTGTTATTCTTCTGTCTAATTCTAGAATTAGTGGTTTTCTCTTTGAATAGTTATGAATATTTGTCATCCACATCCCAAATTGAATCAGACTCAGAAACAACCTCTTGTTCATGTTTTTTTTTTCCTATTAAATGCCTGTAGAAGAACTGGATAGGTAGAGTGGTGGATCATGGTTTTTAATGTGTTCTTCAACCAGGCTGGCTATTGAAGGAGGAGGACCTAGAATGACAGTGATTTGGATCTGCCTTTATGCTTGTTGGTTGAAGGGGCTGAGGTTGAAATTTCTGTTTATGTGTAAGAAGTTTGAGGCAATTTGGATGAGAGAAAGAGAGAGAGGAAAATGGATACATTTAGAGATGTCTGTAAGTGTTTGTTTGTTTGTTTGTTGGTTTGGATGATTTAATATCATCTCTAACAAACGTAAGAAGACAATGGGGCGATGTCAAGTCAAGTCCTGCTTTGTTTTGTTTCGTTTGGTGAATGCTTGTCTGCAAGGTGTGACTATTGAGGCTTTTTTGCTCATTAATTTCTGCATCTATCAAACTTCAGGCACACACCTTGTGGCCTCTGCTGCTGTGTCTTCTTCTGTC ATGCTTATAGAGAAGGAGAACCTGTGTCTCTATGGACTTCCAAATGAAACGTGGGAAGTTAACTTGCCTGTGGAGGAGGTGCCCCCTGAGCTCCCGGAACCAGCATTAGGCATAAACTTTGCGAGGGATGGGATGCAGGAGAAAGATTGGTTATCGCTGGTTGCAGTTCACAGTGATTCATGGTTGCTTGCTGTTGCATTCTATTTTGGTGCTCGTTTTGGATTTGGGAAGAATGAAAGGAAGAGGCTATTCCAGATGATCAACGATCTCCCAAGTGTATTTGAAGTTGTAAGTGGAAATGGTAAGCAGTCAAAAGAACAGTCTGCCACTCATAACAATAGCAGCAAAAGCAAATCGGGTGGGAAGATGTCTAGGCAATTGGAGTCCCATAGCAAGGGAGTGAAGATGTCTCCACCACCAAAAGAGGATGAAGATAGCGGGGAAGACGAGGAGGAAGAAGAAGATGATGAACAGGGTGCAACATGTGGGGCTTGTGGGGACAACTACGGCAACGATGAATTCTGGATTTGTTGTGATGTATGTGAAAGATGGTTCCATGGAAAGTGTGTGAAGATTACACCTGCCAAGGCCGAGCATATCAAACAATACAAGTGTCCAAGTTGCAGTAACAAGAGAGCAAGGGTTTGA MLIEKENLCLYGLPNETWEVNLPVEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNERKRLFQMINDLPSVFEVVSGNGKQSKEQSATHNNSSKSKSGGKMSRQLESHSKGVKMSPPPKEDEDSGEDEEEEEDDEQGATCGACGDNYGNDEFWICCDVCERWFHGKCVKITPAKAEHIKQYKCPSCSNKRARV Homology
BLAST of Cp4.1LG01g08840 vs. ExPASy Swiss-Prot
Match: Q40359 (PHD finger protein Alfin1 OS=Medicago sativa OX=3879 GN=ALFIN-1 PE=1 SV=1) HSP 1 Score: 362.8 bits (930), Expect = 2.6e-99 Identity = 179/214 (83.64%), Postives = 192/214 (89.72%), Query Frame = 0
BLAST of Cp4.1LG01g08840 vs. ExPASy Swiss-Prot
Match: Q8LA16 (PHD finger protein ALFIN-LIKE 7 OS=Arabidopsis thaliana OX=3702 GN=AL7 PE=1 SV=1) HSP 1 Score: 360.1 bits (923), Expect = 1.7e-98 Identity = 170/209 (81.34%), Postives = 189/209 (90.43%), Query Frame = 0
BLAST of Cp4.1LG01g08840 vs. ExPASy Swiss-Prot
Match: Q8S8M9 (PHD finger protein ALFIN-LIKE 6 OS=Arabidopsis thaliana OX=3702 GN=AL6 PE=1 SV=1) HSP 1 Score: 359.4 bits (921), Expect = 2.9e-98 Identity = 178/213 (83.57%), Postives = 191/213 (89.67%), Query Frame = 0
BLAST of Cp4.1LG01g08840 vs. ExPASy Swiss-Prot
Match: B8BJV8 (PHD finger protein ALFIN-LIKE 8 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_35671 PE=3 SV=1) HSP 1 Score: 327.0 bits (837), Expect = 1.6e-88 Identity = 157/213 (73.71%), Postives = 178/213 (83.57%), Query Frame = 0
BLAST of Cp4.1LG01g08840 vs. ExPASy Swiss-Prot
Match: Q2R837 (PHD finger protein ALFIN-LIKE 8 OS=Oryza sativa subsp. japonica OX=39947 GN=Os11g0244800 PE=2 SV=1) HSP 1 Score: 327.0 bits (837), Expect = 1.6e-88 Identity = 157/213 (73.71%), Postives = 178/213 (83.57%), Query Frame = 0
BLAST of Cp4.1LG01g08840 vs. NCBI nr
Match: KAG7031336.1 (PHD finger protein Alfin1 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 429 bits (1103), Expect = 1.55e-151 Identity = 214/216 (99.07%), Postives = 214/216 (99.07%), Query Frame = 0
BLAST of Cp4.1LG01g08840 vs. NCBI nr
Match: XP_022942330.1 (PHD finger protein ALFIN-LIKE 7-like isoform X2 [Cucurbita moschata] >XP_022972061.1 PHD finger protein ALFIN-LIKE 7-like isoform X2 [Cucurbita maxima] >XP_023536749.1 PHD finger protein ALFIN-LIKE 7-like isoform X4 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 430 bits (1106), Expect = 2.21e-151 Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 0
BLAST of Cp4.1LG01g08840 vs. NCBI nr
Match: XP_023536733.1 (PHD finger protein ALFIN-LIKE 7-like isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 430 bits (1106), Expect = 4.87e-151 Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 0
BLAST of Cp4.1LG01g08840 vs. NCBI nr
Match: XP_022942329.1 (PHD finger protein ALFIN-LIKE 7-like isoform X1 [Cucurbita moschata] >XP_022965040.1 PHD finger protein ALFIN-LIKE 7-like isoform X1 [Cucurbita maxima] >XP_023536741.1 PHD finger protein ALFIN-LIKE 7-like isoform X3 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 426 bits (1094), Expect = 1.54e-149 Identity = 212/213 (99.53%), Postives = 212/213 (99.53%), Query Frame = 0
BLAST of Cp4.1LG01g08840 vs. NCBI nr
Match: XP_023536726.1 (PHD finger protein ALFIN-LIKE 7-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 426 bits (1094), Expect = 3.40e-149 Identity = 212/213 (99.53%), Postives = 212/213 (99.53%), Query Frame = 0
BLAST of Cp4.1LG01g08840 vs. ExPASy TrEMBL
Match: A0A6J1I4X7 (PHD finger protein ALFIN-LIKE 7-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111497531 PE=3 SV=1) HSP 1 Score: 430 bits (1106), Expect = 1.07e-151 Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 0
BLAST of Cp4.1LG01g08840 vs. ExPASy TrEMBL
Match: A0A6J1FW30 (PHD finger protein ALFIN-LIKE 7-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111447408 PE=3 SV=1) HSP 1 Score: 430 bits (1106), Expect = 1.07e-151 Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 0
BLAST of Cp4.1LG01g08840 vs. ExPASy TrEMBL
Match: A0A6J1HMK8 (PHD finger protein ALFIN-LIKE 7-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111497531 PE=3 SV=1) HSP 1 Score: 426 bits (1094), Expect = 7.48e-150 Identity = 212/213 (99.53%), Postives = 212/213 (99.53%), Query Frame = 0
BLAST of Cp4.1LG01g08840 vs. ExPASy TrEMBL
Match: A0A6J1FQZ9 (PHD finger protein ALFIN-LIKE 7-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111447408 PE=3 SV=1) HSP 1 Score: 426 bits (1094), Expect = 7.48e-150 Identity = 212/213 (99.53%), Postives = 212/213 (99.53%), Query Frame = 0
BLAST of Cp4.1LG01g08840 vs. ExPASy TrEMBL
Match: A0A6J1J8D6 (PHD finger protein Alfin1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111482676 PE=3 SV=1) HSP 1 Score: 423 bits (1087), Expect = 8.42e-149 Identity = 208/212 (98.11%), Postives = 209/212 (98.58%), Query Frame = 0
BLAST of Cp4.1LG01g08840 vs. TAIR 10
Match: AT1G14510.1 (alfin-like 7 ) HSP 1 Score: 360.1 bits (923), Expect = 1.2e-99 Identity = 170/209 (81.34%), Postives = 189/209 (90.43%), Query Frame = 0
BLAST of Cp4.1LG01g08840 vs. TAIR 10
Match: AT2G02470.1 (alfin-like 6 ) HSP 1 Score: 359.4 bits (921), Expect = 2.0e-99 Identity = 178/213 (83.57%), Postives = 191/213 (89.67%), Query Frame = 0
BLAST of Cp4.1LG01g08840 vs. TAIR 10
Match: AT2G02470.2 (alfin-like 6 ) HSP 1 Score: 347.8 bits (891), Expect = 6.1e-96 Identity = 168/212 (79.25%), Postives = 183/212 (86.32%), Query Frame = 0
BLAST of Cp4.1LG01g08840 vs. TAIR 10
Match: AT5G26210.1 (alfin-like 4 ) HSP 1 Score: 305.8 bits (782), Expect = 2.7e-83 Identity = 158/215 (73.49%), Postives = 179/215 (83.26%), Query Frame = 0
BLAST of Cp4.1LG01g08840 vs. TAIR 10
Match: AT3G42790.1 (alfin-like 3 ) HSP 1 Score: 300.4 bits (768), Expect = 1.1e-81 Identity = 146/211 (69.19%), Postives = 169/211 (80.09%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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