Cp4.1LG01g08610 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG01g08610
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Unknown protein
Location	Cp4.1LG01: 4842009 .. 4845078 (+)
RNA-Seq Expression	Cp4.1LG01g08610
Synteny	Cp4.1LG01g08610

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTATACATTTTTTTAAAACAATATTGAAGTCAATAATTCAACGTGGAATATTCGAATACCTATAAGCTTAAAAAAATGGACTTTCAACCGTCTAAAGTTTATAATTAAAAATCTCGAAAACGGCATTTATCCTGAGAATATCAAATAAAATTAAAATCAATTTTGAAAATATACTCGTAAAATTTGAAGGAATTTTAATCAACCATCTTGGTTCTTCACTCTTCAGGTAACTTCCAACCGTGTAGCGTTAGCGTGGTTTTGCAGCTTTCAGCTTTCCCTTCAACTTCCATTTCTCTGCCGCGAGCGAGCGAGCGAGCGACAGAATTTGTTTTCGAGTTTGCCAGAAACAGATAGACACAGAGATGAGCGCAAATTTGAGTCGCAGATCGTCTGATTTTATTTCGTTTTCGGCTTTGCTTTCTCTTCTATTCGTCTCCGGTACTTTCTTCAGATCTCTCTTTCTTGTCCTTTCTGTTAATTTATACTTCGCTTAATTCAATTTTTATTTAGTTTCTATGATCCGTTCTTTGATTTTATGCAAATTCTCGTTTCCTTGTTTTTGCTTGTTCTGTTACTGGAAGCGGTTGAGGTGAACCGAATTGAGAGGGACGCAATTGACTTTGGAAACCTTTTCTTTTCATGAATTTGTATTCAGATCTCGTTTTTGTTTGATTTTCAATCTCCTTCCATGTTAACTAGTTGAAATCTTTGTTTGTTTATGTTTTCTTAGTTAAAATAATACTTACAGAACTTCATTGTTGTTTGAATGAAATTTGGTTGCTGTATTACGATCTAAGGGGATGTGTGAATCTCAATTTCGCAATGTATAAGCGAGCCAAGCAGATGCACGAAGTAGCAGTACTACTTAATCTGTGTGTCTATATATATATATATAAAGAATCCTTGTCGACATAAAAAACAACTTCTTGTACATGTTTTTATAGGTGTATGAAATTACAAAAACTGTACAAAAAAGCAGCCATGAAGTTTGTTCTTTCAGTGGCTACGCACAATTTTGCTAATTGAGAATGAAAATGAGGAGTTTCAGTTCACCTCTGGCTTCGTTGCTTATTTCCCTTCAAACCCGTACTCATTGTTCATTGCTGAGGGAGATGCAATCATGCATTAGTATTTTACCTGTGTATACTCCAAATCACATGGTTACTCTTATTTTTGTGCATTTTCCATGATCTTTTATCTTGAAATGAATTTTGCTGTCGAATGATAAATTTCTAGACATCAATTAGCCAATATTGAGACATGAATACTATCTTTTGTAGCTATCTCATAACACTTCTTTTGGTTGGCTGCTACAGCCCTTTCTGATGACTCCACTCCCAAAGATGGTATTAAATCTGGAAATCATCCATCCTCCAGAAGCAACACTAGCTCGATGATTGCAATCATCCTCCTTGGTCTTTTGGTAGTGGTGTTGTCATTTTTCCTTTTCAAGTTATGGCAAAAAAAGAGAAGAGAGGAGCAATATGCCCGACTTCTGAAATTGTTTGAAGAAGACGATGAGCTTGAAGTTGAGCTTGGTCTTCGGGATTGAAGGATATCTGAAATTTACTTCACTGAAGTTGGGTATGTCTTTGAACTCGTCATCCTTTTATTTTTCACCTGAAATAGCTTTATACATATCTGATATGCTGGAGTGGTATTGTCATGTCTTTTAGATGATATGGTTTCTCATGATGAATTCAGTATTAGAAAATCCATCGAACGCCATATGTATGTTTCTATTCATGGCTTCCTGACGAGTAATCATTTTTCTTCTCTAATTTATATCTCATTCAGTCTTTTTCTCTATGATGTTGCCATTAAGTTCTTATTATCCTTGGGAGTAACACACTAAATTATAGGAGATTCTCAGTTTTGCTTCTCCATTTCTTGGTTTTGGAACCATTTTACATCCTAAAAGGCTAAAAAGCTCTGTACATATCAACCAACTCCTACTTCCCCTATTTTCTCCTCGTTTCGATTTTTTTTCTTTGCCAACCCTTCATTGCAATGTTGACTCTTTCATCTTGACTTGAACTTACAAATTACAATTAAAAACTCTTAAACGGGAAGTGGAAAAGCCTGTCATGGTGTTTTAAAAGTAAATAGCTTCCTTAGAGACTATGCTTAAGGTGCTTCGTGGGGGCGAGACTATGTAAGACAACATTATATCTATATAAACTTTCAAGTACTATTCATAAAAGAATGTCTATTTTGAGCACTGCCCATAGGAAAGGTATGATGGAGAAGGCAACATGCTAGCACTGCCATTAGCATTGCAAGACGTTCTACCAATTAGTATCAGTAAAAATGAATCATAATTACAAAATAATAACTAGGAGCTGTTAAAATATTTTATGATACTCCCACGCATTCTAGAAAATACCATATAAGAACATTTCCCATAGAAGATGATATTGCAGCAAAAGCTACTCTAATTATTTACTTGTTCAGTGACTTTATGAATTGATGCACTGGCTGTTGTGTAGCTTGTCAGACCTTTTGAAGCTTTTAGACCTAATATATTCGCTTTTATGCTGTTCTTGCGATTACACTCTATACCCCGACTTGCTTGTTTGTTTTAGACTGTTCTTGCATCTGCATTCAATAGTGAGCTGTCATTTCTTTTTGGGGCCCTCACAAGTTAGGCAGTATATATCAAATGTTTTATCACACCTCAAATGTTCAAAAGGGGCACTTCTCTTGCTTTTGTCTCTCTTTTGTACCTTATAATTGACAATATTCAGATTCCTGTACATATAATTTACATATAATTTTCAGATTCCTGTACCTTATAATTGACAATATTCCTTCATCTGAAATTCTATCACAGGCTTAGAAAACATTATCTTGGAATTGTTGCATGTCAAATGTCTAAAGATCATAAGACGGTAGTTTGCTGTAAGGTTAGTTTTATTTTATTTTTTTTCTTTTCTACAATTTTAGATGTATTAGTTTATCCAATTGAGGATAAAATGAGTGCTTATAGCATGTAAAATTGATGAGTTCATATATGTAAAATTGATGTTATATAACGAGTTTATTAATGAAAGGGTTAAGTTCTCAAAT

mRNA sequence

ATTATACATTTTTTTAAAACAATATTGAAGTCAATAATTCAACGTGGAATATTCGAATACCTATAAGCTTAAAAAAATGGACTTTCAACCGTCTAAAGTTTATAATTAAAAATCTCGAAAACGGCATTTATCCTGAGAATATCAAATAAAATTAAAATCAATTTTGAAAATATACTCGTAAAATTTGAAGGAATTTTAATCAACCATCTTGGTTCTTCACTCTTCAGGTAACTTCCAACCGTGTAGCGTTAGCGTGGTTTTGCAGCTTTCAGCTTTCCCTTCAACTTCCATTTCTCTGCCGCGAGCGAGCGAGCGAGCGACAGAATTTGTTTTCGAGTTTGCCAGAAACAGATAGACACAGAGATGAGCGCAAATTTGAGTCGCAGATCGTCTGATTTTATTTCGTTTTCGGCTTTGCTTTCTCTTCTATTCGTCTCCGCCCTTTCTGATGACTCCACTCCCAAAGATGGTATTAAATCTGGAAATCATCCATCCTCCAGAAGCAACACTAGCTCGATGATTGCAATCATCCTCCTTGGTCTTTTGGTAGTGGTGTTGTCATTTTTCCTTTTCAAGTTATGGCAAAAAAAGAGAAGAGAGGAGCAATATGCCCGACTTCTGAAATTGTTTGAAGAAGACGATGAGCTTGAAGTTGAGCTTGGTCTTCGGGATTGAAGGATATCTGAAATTTACTTCACTGAAGTTGGGCTTAGAAAACATTATCTTGGAATTGTTGCATGTCAAATGTCTAAAGATCATAAGACGGTAGTTTGCTGTAAGGTTAGTTTTATTTTATTTTTTTTCTTTTCTACAATTTTAGATGTATTAGTTTATCCAATTGAGGATAAAATGAGTGCTTATAGCATGTAAAATTGATGAGTTCATATATGTAAAATTGATGTTATATAACGAGTTTATTAATGAAAGGGTTAAGTTCTCAAAT

Coding sequence (CDS)

ATGAGCGCAAATTTGAGTCGCAGATCGTCTGATTTTATTTCGTTTTCGGCTTTGCTTTCTCTTCTATTCGTCTCCGCCCTTTCTGATGACTCCACTCCCAAAGATGGTATTAAATCTGGAAATCATCCATCCTCCAGAAGCAACACTAGCTCGATGATTGCAATCATCCTCCTTGGTCTTTTGGTAGTGGTGTTGTCATTTTTCCTTTTCAAGTTATGGCAAAAAAAGAGAAGAGAGGAGCAATATGCCCGACTTCTGAAATTGTTTGAAGAAGACGATGAGCTTGAAGTTGAGCTTGGTCTTCGGGATTGA

Protein sequence

MSANLSRRSSDFISFSALLSLLFVSALSDDSTPKDGIKSGNHPSSRSNTSSMIAIILLGLLVVVLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD

Homology

[Close]

BLAST of Cp4.1LG01g08610 vs. NCBI nr
Match: KAG7031355.1 (hypothetical protein SDJN02_05395 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 183 bits (465), Expect = 6.50e-58
Identity = 101/103 (98.06%), Postives = 101/103 (98.06%), Query Frame = 0


Query: 1   MSANLSRRSSDFISFSALLSLLFVSALSDDSTPKDGIKSGNHPSSRSNTSSMIAIILLGL 60
           MS NLSRRSSDFISFSALLSLLFVSALSDDSTPKD IKSGNHPSSRSNTSSMIAIILLGL
Sbjct: 1   MSENLSRRSSDFISFSALLSLLFVSALSDDSTPKDSIKSGNHPSSRSNTSSMIAIILLGL 60

Query: 61  LVVVLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD 103
           LVVVLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD
Sbjct: 61  LVVVLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD 103

[Close]

BLAST of Cp4.1LG01g08610 vs. NCBI nr
Match: XP_016901207.1 (PREDICTED: uncharacterized protein LOC103493315 [Cucumis melo])

HSP 1 Score: 160 bits (406), Expect = 6.67e-49
Identity = 90/104 (86.54%), Postives = 95/104 (91.35%), Query Frame = 0


Query: 1   MSANLSRRSSDFISFSALLSLLFVSALSDDSTPKDGIKSGNHPSSRSNTSSMIAIILLGL 60
           MS NLS R SDF+SFSA LSLLFVSALSDDS+ KD I SGNHPSSRSNT SM+AIILLG+
Sbjct: 1   MSRNLSPRPSDFLSFSASLSLLFVSALSDDSSKKDSINSGNHPSSRSNTGSMVAIILLGI 60

Query: 61  LV-VVLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD 103
           LV V+LSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD
Sbjct: 61  LVAVLLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD 104

[Close]

BLAST of Cp4.1LG01g08610 vs. NCBI nr
Match: KAE8650189.1 (hypothetical protein Csa_011006, partial [Cucumis sativus])

HSP 1 Score: 155 bits (392), Expect = 1.41e-45
Identity = 88/104 (84.62%), Postives = 93/104 (89.42%), Query Frame = 0


Query: 1   MSANLSRRSSDFISFSALLSLLFVSALSDDSTPKDGIKSGNHPSSRSNTSSMIAIILLGL 60
           MS N S R SDF+SFSA LSLLFVSALSDDS+ KD   SGNHPSSRS+T SM+AIILLG+
Sbjct: 90  MSRNSSPRPSDFLSFSASLSLLFVSALSDDSSKKDSTHSGNHPSSRSSTGSMVAIILLGI 149

Query: 61  LVVVL-SFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD 103
           LVVVL SFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD
Sbjct: 150 LVVVLLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD 193

[Close]

BLAST of Cp4.1LG01g08610 vs. NCBI nr
Match: XP_022929545.1 (uncharacterized protein LOC111436082 [Cucurbita moschata] >XP_022929546.1 uncharacterized protein LOC111436082 [Cucurbita moschata] >XP_022929547.1 uncharacterized protein LOC111436082 [Cucurbita moschata] >XP_022984816.1 uncharacterized protein LOC111482987 [Cucurbita maxima] >XP_023551749.1 uncharacterized protein LOC111809626 [Cucurbita pepo subsp. pepo] >XP_023551750.1 uncharacterized protein LOC111809626 [Cucurbita pepo subsp. pepo] >XP_023551751.1 uncharacterized protein LOC111809626 [Cucurbita pepo subsp. pepo] >XP_023551752.1 uncharacterized protein LOC111809626 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 148 bits (373), Expect = 7.15e-44
Identity = 85/104 (81.73%), Postives = 90/104 (86.54%), Query Frame = 0


Query: 1   MSANLSRRSSDFISFSALLSLLFVSALSDDSTPKDGIKSGNHPSSRSNTSSMIAIILLGL 60
           MS NLSRRSSD ++ SA LSLLFVSALS+DS+ KD I SG H SS S T SM+AIILLG 
Sbjct: 1   MSRNLSRRSSDLVALSASLSLLFVSALSNDSSGKDSINSGKHSSSSSKTGSMVAIILLGF 60

Query: 61  LVVVL-SFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD 103
           LVVVL SFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD
Sbjct: 61  LVVVLLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD 104

[Close]

BLAST of Cp4.1LG01g08610 vs. NCBI nr
Match: KAG7015450.1 (hypothetical protein SDJN02_23086, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 148 bits (373), Expect = 1.86e-43
Identity = 85/104 (81.73%), Postives = 90/104 (86.54%), Query Frame = 0


Query: 1   MSANLSRRSSDFISFSALLSLLFVSALSDDSTPKDGIKSGNHPSSRSNTSSMIAIILLGL 60
           MS NLSRRSSD ++ SA LSLLFVSALS+DS+ KD I SG H SS S T SM+AIILLG 
Sbjct: 32  MSRNLSRRSSDLVALSASLSLLFVSALSNDSSGKDSINSGKHSSSSSKTGSMVAIILLGF 91

Query: 61  LVVVL-SFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD 103
           LVVVL SFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD
Sbjct: 92  LVVVLLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD 135

[Close]

BLAST of Cp4.1LG01g08610 vs. ExPASy TrEMBL
Match: A0A1S4DZ07 (uncharacterized protein LOC103493315 OS=Cucumis melo OX=3656 GN=LOC103493315 PE=4 SV=1)

HSP 1 Score: 160 bits (406), Expect = 3.23e-49
Identity = 90/104 (86.54%), Postives = 95/104 (91.35%), Query Frame = 0


Query: 1   MSANLSRRSSDFISFSALLSLLFVSALSDDSTPKDGIKSGNHPSSRSNTSSMIAIILLGL 60
           MS NLS R SDF+SFSA LSLLFVSALSDDS+ KD I SGNHPSSRSNT SM+AIILLG+
Sbjct: 1   MSRNLSPRPSDFLSFSASLSLLFVSALSDDSSKKDSINSGNHPSSRSNTGSMVAIILLGI 60

Query: 61  LV-VVLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD 103
           LV V+LSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD
Sbjct: 61  LVAVLLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD 104

[Close]

BLAST of Cp4.1LG01g08610 vs. ExPASy TrEMBL
Match: A0A0A0L5F0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G110610 PE=4 SV=1)

HSP 1 Score: 155 bits (392), Expect = 3.61e-46
Identity = 88/104 (84.62%), Postives = 93/104 (89.42%), Query Frame = 0


Query: 1   MSANLSRRSSDFISFSALLSLLFVSALSDDSTPKDGIKSGNHPSSRSNTSSMIAIILLGL 60
           MS N S R SDF+SFSA LSLLFVSALSDDS+ KD   SGNHPSSRS+T SM+AIILLG+
Sbjct: 69  MSRNSSPRPSDFLSFSASLSLLFVSALSDDSSKKDSTHSGNHPSSRSSTGSMVAIILLGI 128

Query: 61  LVVVL-SFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD 103
           LVVVL SFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD
Sbjct: 129 LVVVLLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD 172

[Close]

BLAST of Cp4.1LG01g08610 vs. ExPASy TrEMBL
Match: A0A6J1EUP1 (uncharacterized protein LOC111436082 OS=Cucurbita moschata OX=3662 GN=LOC111436082 PE=4 SV=1)

HSP 1 Score: 148 bits (373), Expect = 3.46e-44
Identity = 85/104 (81.73%), Postives = 90/104 (86.54%), Query Frame = 0


Query: 1   MSANLSRRSSDFISFSALLSLLFVSALSDDSTPKDGIKSGNHPSSRSNTSSMIAIILLGL 60
           MS NLSRRSSD ++ SA LSLLFVSALS+DS+ KD I SG H SS S T SM+AIILLG 
Sbjct: 1   MSRNLSRRSSDLVALSASLSLLFVSALSNDSSGKDSINSGKHSSSSSKTGSMVAIILLGF 60

Query: 61  LVVVL-SFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD 103
           LVVVL SFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD
Sbjct: 61  LVVVLLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD 104

[Close]

BLAST of Cp4.1LG01g08610 vs. ExPASy TrEMBL
Match: A0A6J1J6C2 (uncharacterized protein LOC111482987 OS=Cucurbita maxima OX=3661 GN=LOC111482987 PE=4 SV=1)

HSP 1 Score: 148 bits (373), Expect = 3.46e-44
Identity = 85/104 (81.73%), Postives = 90/104 (86.54%), Query Frame = 0


Query: 1   MSANLSRRSSDFISFSALLSLLFVSALSDDSTPKDGIKSGNHPSSRSNTSSMIAIILLGL 60
           MS NLSRRSSD ++ SA LSLLFVSALS+DS+ KD I SG H SS S T SM+AIILLG 
Sbjct: 1   MSRNLSRRSSDLVALSASLSLLFVSALSNDSSGKDSINSGKHSSSSSKTGSMVAIILLGF 60

Query: 61  LVVVL-SFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD 103
           LVVVL SFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD
Sbjct: 61  LVVVLLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD 104

[Close]

BLAST of Cp4.1LG01g08610 vs. ExPASy TrEMBL
Match: A0A5A7V4C4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G004510 PE=4 SV=1)

HSP 1 Score: 129 bits (323), Expect = 1.94e-36
Identity = 69/78 (88.46%), Postives = 73/78 (93.59%), Query Frame = 0


Query: 27  LSDDSTPKDGIKSGNHPSSRSNTSSMIAIILLGLLV-VVLSFFLFKLWQKKRREEQYARL 86
           LSDDS+ KD I SGNHPSSRSNT SM+AIILLG+LV V+LSFFLFKLWQKKRREEQYARL
Sbjct: 37  LSDDSSKKDSINSGNHPSSRSNTGSMVAIILLGILVAVLLSFFLFKLWQKKRREEQYARL 96

Query: 87  LKLFEEDDELEVELGLRD 103
           LKLFEEDDELEVELGLRD
Sbjct: 97  LKLFEEDDELEVELGLRD 114

[Close]

BLAST of Cp4.1LG01g08610 vs. TAIR 10
Match: AT1G09645.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G57765.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 89.0 bits (219), Expect = 2.5e-18
Identity = 53/91 (58.24%), Postives = 67/91 (73.63%), Query Frame = 0


Query: 15  FSALLSLLFVSALSDDS-TPKDGIKSGNHPSSRSNTSSMIAIILLGLLVVVL-SFFLFKL 74
           F A + L F   LS DS     G+K+ +H SS S T + + ++L+G + V + SFFL+KL
Sbjct: 17  FFASIGLQFFLGLSGDSKNTNAGVKTESHTSS-SKTGTKVILVLVGFVAVAMFSFFLYKL 76

Query: 75  WQKKRREEQYARLLKLFEEDDELEVELGLRD 104
           WQKK+R+EQYARLLKLFEEDDELEVELGLRD
Sbjct: 77  WQKKKRDEQYARLLKLFEEDDELEVELGLRD 106

[Close]

BLAST of Cp4.1LG01g08610 vs. TAIR 10
Match: AT1G57765.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G09645.1); Has 68 Blast hits to 68 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 68; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 85.5 bits (210), Expect = 2.7e-17
Identity = 50/82 (60.98%), Postives = 60/82 (73.17%), Query Frame = 0


Query: 23  FVSALSDDSTPKDGIKSGNHPSSRSNTSSMIAIILLGL-LVVVLSFFLFKLWQKKRREEQ 82
           F+    D ++   G K+ +H SS S T + +  ILLG   V  LSFFL+KLWQKK+R+EQ
Sbjct: 27  FLGISGDPNSSSTGAKAESHTSS-SKTGTKVIFILLGFGAVAGLSFFLYKLWQKKKRDEQ 86

Query: 83  YARLLKLFEEDDELEVELGLRD 104
           YARLLKLFEEDDELEVELGLRD
Sbjct: 87  YARLLKLFEEDDELEVELGLRD 107

[Close]

BLAST of Cp4.1LG01g08610 vs. TAIR 10
Match: AT1G57765.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G09645.1). )

HSP 1 Score: 83.6 bits (205), Expect = 1.0e-16
Identity = 53/92 (57.61%), Postives = 65/92 (70.65%), Query Frame = 0


Query: 15  FSALLSL--LFVSALSDDSTPKDGIKSGNHPSSRSNTSSMIAIILLGL-LVVVLSFFLFK 74
           F A+L L  ++     D ++   G K+ +H SS S T + +  ILLG   V  LSFFL+K
Sbjct: 27  FLAMLYLDSVYQCISGDPNSSSTGAKAESHTSS-SKTGTKVIFILLGFGAVAGLSFFLYK 86

Query: 75  LWQKKRREEQYARLLKLFEEDDELEVELGLRD 104
           LWQKK+R+EQYARLLKLFEEDDELEVELGLRD
Sbjct: 87  LWQKKKRDEQYARLLKLFEEDDELEVELGLRD 117

[Close]

BLAST of Cp4.1LG01g08610 vs. TAIR 10
Match: AT3G53490.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G02720.1); Has 70 Blast hits to 70 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 49.7 bits (117), Expect = 1.7e-06
Identity = 30/75 (40.00%), Postives = 47/75 (62.67%), Query Frame = 0


Query: 29  DDSTPKDGIKSGNHPSSRSNTSSMIAIILLGLLVVVLSFFLFKLWQKKRREEQYARLLKL 88
           +  T K+  K G HP        +I ++LLG++ V L    +K W+KK+R+++ AR LKL
Sbjct: 154 ESGTEKEEQKGGMHP----GIVVLIVVLLLGVVAVGL-LVGYKYWRKKKRQQEQARFLKL 213

Query: 89  FEEDDELEVELGLRD 104
           FE+ D++E ELGL +
Sbjct: 214 FEDGDDIEDELGLEN 223

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g08610 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG01g08610 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7031355.1	6.50e-58	98.06	hypothetical protein SDJN02_05395 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_016901207.1	6.67e-49	86.54	PREDICTED: uncharacterized protein LOC103493315 [Cucumis melo]	[more]
KAE8650189.1	1.41e-45	84.62	hypothetical protein Csa_011006, partial [Cucumis sativus]	[more]
XP_022929545.1	7.15e-44	81.73	uncharacterized protein LOC111436082 [Cucurbita moschata] >XP_022929546.1 unchar...	[more]
KAG7015450.1	1.86e-43	81.73	hypothetical protein SDJN02_23086, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of Cp4.1LG01g08610 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4DZ07	3.23e-49	86.54	uncharacterized protein LOC103493315 OS=Cucumis melo OX=3656 GN=LOC103493315 PE=...	[more]
A0A0A0L5F0	3.61e-46	84.62	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G110610 PE=4 SV=1	[more]
A0A6J1EUP1	3.46e-44	81.73	uncharacterized protein LOC111436082 OS=Cucurbita moschata OX=3662 GN=LOC1114360...	[more]
A0A6J1J6C2	3.46e-44	81.73	uncharacterized protein LOC111482987 OS=Cucurbita maxima OX=3661 GN=LOC111482987...	[more]
A0A5A7V4C4	1.94e-36	88.46	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of Cp4.1LG01g08610 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G09645.1	2.5e-18	58.24	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G57765.1	2.7e-17	60.98	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G57765.2	1.0e-16	57.61	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G53490.1	1.7e-06	40.00	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33780:SF10	TRANSMEMBRANE PROTEIN	coord: 4..103
None	No IPR available	PANTHER	PTHR33780	EXPRESSED PROTEIN	coord: 4..103

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g08610.1	Cp4.1LG01g08610.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane