Cp4.1LG01g08570 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG01g08570
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	thioredoxin-like
Location	Cp4.1LG01: 4906003 .. 4908639 (+)
RNA-Seq Expression	Cp4.1LG01g08570
Synteny	Cp4.1LG01g08570

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTACGGTTCTCGATTCCCTCGCTCTTCCCTCTTCCTCCGTCTTGGCTTCCACCACCTTCTCCGGCCGTCGGACCTCCCTCGCGCTTCCGCGCTACAGAGCATTGAAGGTCGGACACAGCTTCACTTCTCATTCTATAAAATCTGCGAGATCGAATGCCAGATTTACTCATCGTTCTGGCAGAGTCGTCTGCGAAGGTCAGGAAACTTCTTCCATAGGTTCGGATTTTGTTCTGTTGTTTTCTTTTATTGTGTTGTTTGGCTTTTGGGAGAAGGGAAGAAAGGAAAATTTAGGACACTTGTAAGTTTGGTGAATTGATGAAGATCATACTCTTAAGTGTCTATTGGTGTTTGGTTTGGTTTTGATAAAAGTTGAAACTAAACTGTATAATTAACAAATAGTAGGTTAGATCATTACTAGAGTTATATGCGGCAACTACTTATGCGTTAAATGAAGTCTCACAAATAGTGTCTACCCTTAAAAGCTTCGAACACATCGAGTATATTGTAGTTAGTTGTCCATGTTAAGTAAAGTGACCTTTTGTATTTAGTTGATTTTGTGGGTTCAGTAGCTGACTGATGAAAAAGGAGTTAGCCAATTTTCAAAGAAGCTGCATTAAATTGTCAATTTTCAATTCCTTTTTTATCCAATCAACTACTTAACTTTGACACTTATGTAGCTAACTGTCAGGCATTCAATCCTTCTCTTATTTATAAGGGGAGGATTGTTTATGAGGTTTTATCAATAGGGATATAATTATAACTTTTAAAACCATAAGGATTAAATCTAACTTTCTCCAAACTATTGGGATCACATTTGTAATTCACCTACTATGTTTTAGTCCTCTGAAGCCTGACAGATTTGAAGGTAAAATCCTGGGATGGCAAGTTGCAATCAATCTAAATTGGGCTGTGGAAATGTGTTTCCATTTGAAAGTGAAAGATCAAGCATTAAAATTTCAATGAATTACTACATTAACCATAAAGATTGGATAGCAAGAGTTAACTACTGATTAAGGTATATTCTCTCGACCAAGGGATCATATATCTATAACTAAATTAAGCTTAACTCATGTGCTTAAGAAATGTACACTTGGTCAAAATGTCCAAAGTGCTCCATATCCCTCCCGTAGAGGTTTCCTGGGTTTGTTGCAGTTGGAAGAGAGGTGCCTCTGATACCAACTTGAGTTATAAAATGAAGGGAATGTACTTCATGTTGCTCAGTGGGCAGAATAAATTATATGAGATTGGAGCTCTTCTTTAGTTTATATGTTGCCATGGTCAATCAGTCGACACCCAATAGGTGAGTGACAAACCAATTCTGTGCACCCTTGTGAATATGATTTCTGCTGTGCCTGGGTCTTAATGCCGTTATAGAGAGTCGTCAGTAGGGAGCTGGTCTGATACTGGCTCAGTTTGTTTGGAATTTTGGAGAAAGTGGTTTACTCGTCTCTCTCTCCTGGTTCTTCCCAGTAACCCCATTCTTTTGCGTGTGTATGAGTGAGCGTGTTTTGGTGTATGCATCTTGATTTGCAGGGGAGCCAACATTTACCTTTTATGTATGGCATGAGATTCTGAGTCATTTACAGCATTTGTTGTTGGTTGTCTTTCCTGCTCACCATTTTTTATTGTTATTATGAATCGTTAATTTGGAATAACAGATGTTTAAGTATAGAAAAACGTTTACCAAATAGTGCATTTAAGCTATACCTTTATATTCTAATATATACACATGCATGAACATATTTATTTTATCTATGAAGATCATGGGGTGGGGACGTCGAAATTTTTAGTTTGAGTATTAAGAATGTGATACTTTCAATTGACTTCGAGTTCAGGCTCTGTATCATAGGTTGTACTGATTCTTGATCACTTGCTTTTGCGATAATTCCTGCAATGTGACAGCACTCAGTTCATGTTAGAACATTCACATAGTAATTTGTTATCCATAAAATAACATTTTAATCTATGTTTTCTTTTGACTCTTCTCTTCCGTCTGACTGATTCACAGATCAGCAATATACCTGCAACTACTTTTTATTTCTCTAACTTTCTTTCCCCCAAAAGAAAACCCTTGTCGAGGTTTAACAAATCACATGTTTCTCGAATGTTGCAGTACCTTCTGCTTCAGAAGCTACTTGGCAGTCACAGGTTATTGAATCTGGTTTACCGGTTCTAGTTGAATTCTGGGCTCCATGGTGCGGTCCTTGCCGAATGATTCATCCGGTTGTTGATGAACTATCCGAGGAGTATGCAGGAAAGTTTAAATTTTACAAGGTAAATACTGATGAGGAAGCTGGGATTGCATCCCAATGTGCTATCAGAAGCATCCCCACTGCCATTATCTTCAAAAATGGTGAGAAGAAGGAGGCAATAATTGGTGCAGTTCCCAAAACAACTCTGACTGATATCATGGACAAATTCTTGTAGAGATGGCTGATAAAAAGTACGTATTGAAAGAATCAAAGCTGCTTTCTCATAGTTTATTGAATTTCTCCTCTATATCTGATGATGAATTCTCTAGTCTGGAAATAAACTCTCCTCGTTTGTTACAAATAGTTCTTAATGCAACTGTATCTTCTTTGGTCATGGCAATTCAATACCTTTTCTATGAATGCATCTTTCTTTTTTGAATT

mRNA sequence

ATGGCTACGGTTCTCGATTCCCTCGCTCTTCCCTCTTCCTCCGTCTTGGCTTCCACCACCTTCTCCGGCCGTCGGACCTCCCTCGCGCTTCCGCGCTACAGAGCATTGAAGGTCGGACACAGCTTCACTTCTCATTCTATAAAATCTGCGAGATCGAATGCCAGATTTACTCATCGTTCTGGCAGAGTCGTCTGCGAAGGTCAGGAAACTTCTTCCATAGTACCTTCTGCTTCAGAAGCTACTTGGCAGTCACAGGTTATTGAATCTGGTTTACCGGTTCTAGTTGAATTCTGGGCTCCATGGTGCGGTCCTTGCCGAATGATTCATCCGGTTGTTGATGAACTATCCGAGGAGTATGCAGGAAAGTTTAAATTTTACAAGGTAAATACTGATGAGGAAGCTGGGATTGCATCCCAATGTGCTATCAGAAGCATCCCCACTGCCATTATCTTCAAAAATGGTGAGAAGAAGGAGGCAATAATTGGTGCAGTTCCCAAAACAACTCTGACTGATATCATGGACAAATTCTTGTAGAGATGGCTGATAAAAAGTACGTATTGAAAGAATCAAAGCTGCTTTCTCATAGTTTATTGAATTTCTCCTCTATATCTGATGATGAATTCTCTAGTCTGGAAATAAACTCTCCTCGTTTGTTACAAATAGTTCTTAATGCAACTGTATCTTCTTTGGTCATGGCAATTCAATACCTTTTCTATGAATGCATCTTTCTTTTTTGAATT

Coding sequence (CDS)

ATGGCTACGGTTCTCGATTCCCTCGCTCTTCCCTCTTCCTCCGTCTTGGCTTCCACCACCTTCTCCGGCCGTCGGACCTCCCTCGCGCTTCCGCGCTACAGAGCATTGAAGGTCGGACACAGCTTCACTTCTCATTCTATAAAATCTGCGAGATCGAATGCCAGATTTACTCATCGTTCTGGCAGAGTCGTCTGCGAAGGTCAGGAAACTTCTTCCATAGTACCTTCTGCTTCAGAAGCTACTTGGCAGTCACAGGTTATTGAATCTGGTTTACCGGTTCTAGTTGAATTCTGGGCTCCATGGTGCGGTCCTTGCCGAATGATTCATCCGGTTGTTGATGAACTATCCGAGGAGTATGCAGGAAAGTTTAAATTTTACAAGGTAAATACTGATGAGGAAGCTGGGATTGCATCCCAATGTGCTATCAGAAGCATCCCCACTGCCATTATCTTCAAAAATGGTGAGAAGAAGGAGGCAATAATTGGTGCAGTTCCCAAAACAACTCTGACTGATATCATGGACAAATTCTTGTAG

Protein sequence

MATVLDSLALPSSSVLASTTFSGRRTSLALPRYRALKVGHSFTSHSIKSARSNARFTHRSGRVVCEGQETSSIVPSASEATWQSQVIESGLPVLVEFWAPWCGPCRMIHPVVDELSEEYAGKFKFYKVNTDEEAGIASQCAIRSIPTAIIFKNGEKKEAIIGAVPKTTLTDIMDKFL

Homology

[Close]

BLAST of Cp4.1LG01g08570 vs. ExPASy Swiss-Prot
Match: Q9SEU6 (Thioredoxin M4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g15360 PE=2 SV=2)

HSP 1 Score: 175.3 bits (443), Expect = 6.3e-43
Identity = 92/191 (48.17%), Postives = 127/191 (66.49%), Query Frame = 0


Query: 1   MATVLDS----------LALPSSSVLASTTFSGRRTSLA-LPRYRALKVGHSFTSHSIKS 60
           MA++LDS          +A   SS  A+ + S RR S A    +R LK   S  + S   
Sbjct: 1   MASLLDSVTVTRVFSLPIAASVSSSSAAPSVSRRRISPARFLEFRGLKSSRSLVTQSASL 60

Query: 61  ARSNARFTHRSGRVVCEGQETSSI---VPSASEATWQSQVIESGLPVLVEFWAPWCGPCR 120
             +      R GR+ CE Q+T++    VP+ S++ WQ++V+ES +PVLVEFWAPWCGPCR
Sbjct: 61  GANRRTRIARGGRIACEAQDTTAAAVEVPNLSDSEWQTKVLESDVPVLVEFWAPWCGPCR 120

Query: 121 MIHPVVDELSEEYAGKFKFYKVNTDEEAGIASQCAIRSIPTAIIFKNGEKKEAIIGAVPK 178
           MIHP+VD+L++++AGKFKFYK+NTDE    A++  IRS+PT IIFK GEKK++IIGAVP+
Sbjct: 121 MIHPIVDQLAKDFAGKFKFYKINTDESPNTANRYGIRSVPTVIIFKGGEKKDSIIGAVPR 180

[Close]

BLAST of Cp4.1LG01g08570 vs. ExPASy Swiss-Prot
Match: P07591 (Thioredoxin M-type, chloroplastic OS=Spinacia oleracea OX=3562 PE=1 SV=2)

HSP 1 Score: 160.6 bits (405), Expect = 1.6e-38
Identity = 77/148 (52.03%), Postives = 108/148 (72.97%), Query Frame = 0


Query: 30  LPRYRALKVGHSFTSHSIKSARSNARFTHRSGRVVCEGQETSSIVPSASEATWQSQVIES 89
           +P +R LK      S S+ S+ S  +F + S  VVC+  E    V   ++++W+  V+ES
Sbjct: 35  VPTFRGLKRSFPALSSSVSSS-SPRQFRYSS--VVCKASEAVKEVQDVNDSSWKEFVLES 94

Query: 90  GLPVLVEFWAPWCGPCRMIHPVVDELSEEYAGKFKFYKVNTDEEAGIASQCAIRSIPTAI 149
            +PV+V+FWAPWCGPC++I PV+DEL++EY+GK   YK+NTDE  GIA+Q  IRSIPT +
Sbjct: 95  EVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEAPGIATQYNIRSIPTVL 154

Query: 150 IFKNGEKKEAIIGAVPKTTLTDIMDKFL 178
            FKNGE+KE+IIGAVPK+TLTD ++K+L
Sbjct: 155 FFKNGERKESIIGAVPKSTLTDSIEKYL 179

[Close]

BLAST of Cp4.1LG01g08570 vs. ExPASy Swiss-Prot
Match: Q6H7E4 (Thioredoxin M1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0639900 PE=2 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 2.1e-38
Identity = 78/126 (61.90%), Postives = 97/126 (76.98%), Query Frame = 0


Query: 59  RSGR-----VVC--EGQETSSIVPSASEATWQSQVIESGLPVLVEFWAPWCGPCRMIHPV 118
           RSGR     VVC  +GQETS  VP  +++TWQS V+ES LPVLVEFWA WCGPC+MI PV
Sbjct: 46  RSGRARGVSVVCAAQGQETSFQVPDVTKSTWQSLVVESELPVLVEFWASWCGPCKMIDPV 105

Query: 119 VDELSEEYAGKFKFYKVNTDEEAGIASQCAIRSIPTAIIFKNGEKKEAIIGAVPKTTLTD 178
           + +LS+EY GK   YK+NTDE   IA+Q  IRSIPT +IFKNGEKK+A+IGAVP++TL  
Sbjct: 106 IGKLSKEYEGKLNCYKLNTDENPDIATQFGIRSIPTMMIFKNGEKKDAVIGAVPESTLVS 165

[Close]

BLAST of Cp4.1LG01g08570 vs. ExPASy Swiss-Prot
Match: Q7X8R5 (Thioredoxin M2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0530600 PE=2 SV=2)

HSP 1 Score: 159.5 bits (402), Expect = 3.6e-38
Identity = 93/186 (50.00%), Postives = 118/186 (63.44%), Query Frame = 0


Query: 1   MATVLDSLALPSSSVLAS---TTFSGRRTSLALP----RYRALKVGHSFTSHSIKSARSN 60
           MA+ L +     SS LAS   +  S RR     P    RY+AL+    F          N
Sbjct: 1   MASALAASTAVCSSPLASASASASSARRLRAVPPSRGIRYQALRADSGFA--------GN 60

Query: 61  ARFTHRSGRVVC--EGQETSSIVPSASEATWQSQVIESGLPVLVEFWAPWCGPCRMIHPV 120
            R   R   VVC  +GQ+TS  VP  +++TWQS V+ES LPVLV +WA WCGPC+MI PV
Sbjct: 61  RRGGGRGASVVCAVQGQDTSIQVPEVTKSTWQSLVMESELPVLVGYWATWCGPCKMIDPV 120

Query: 121 VDELSEEYAGKFKFYKVNTDEEAGIASQCAIRSIPTAIIFKNGEKKEAIIGAVPKTTLTD 178
           V +LS+EY GK K YK+NTDE   IASQ  +RSIPT +IFKNGEKK+A+IGAVP++TL  
Sbjct: 121 VGKLSKEYEGKLKCYKLNTDENPDIASQYGVRSIPTMMIFKNGEKKDAVIGAVPESTLIA 178

[Close]

BLAST of Cp4.1LG01g08570 vs. ExPASy Swiss-Prot
Match: Q9SEU8 (Thioredoxin M2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TRXM2 PE=1 SV=2)

HSP 1 Score: 157.9 bits (398), Expect = 1.0e-37
Identity = 78/165 (47.27%), Postives = 109/165 (66.06%), Query Frame = 0


Query: 13  SSVLASTTFSGRRTSLALPRYRALKVGHSFTSHSIKSARSNARFTHRSGRVVCEGQETSS 72
           SS  ++++ S RR    LP    L++  S +  S+ S     R +     VVCE QET++
Sbjct: 22  SSSPSASSLSSRRMFAVLPESSGLRIRLSLSPASLTSIH-QPRVSRLRRAVVCEAQETTT 81

Query: 73  IVPSASEATWQSQVIESGLPVLVEFWAPWCGPCRMIHPVVDELSEEYAGKFKFYKVNTDE 132
            +   +++TW S V+++  PV+V+FWAPWCGPC+MI P+V++L++ Y GK KFYK+NTDE
Sbjct: 82  DIQVVNDSTWDSLVLKATGPVVVDFWAPWCGPCKMIDPLVNDLAQHYTGKIKFYKLNTDE 141

Query: 133 EAGIASQCAIRSIPTAIIFKNGEKKEAIIGAVPKTTLTDIMDKFL 178
                 Q  +RSIPT +IF  GEKK+ IIGAVPKTTLT  +DKFL
Sbjct: 142 SPNTPGQYGVRSIPTIMIFVGGEKKDTIIGAVPKTTLTSSLDKFL 185

[Close]

BLAST of Cp4.1LG01g08570 vs. NCBI nr
Match: XP_023539212.1 (uncharacterized protein LOC111799921 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 350 bits (898), Expect = 1.49e-121
Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0


Query: 1   MATVLDSLALPSSSVLASTTFSGRRTSLALPRYRALKVGHSFTSHSIKSARSNARFTHRS 60
           MATVLDSLALPSSSVLASTTFSGRRTSLALPRYRALKVGHSFTSHSIKSARSNARFTHRS
Sbjct: 1   MATVLDSLALPSSSVLASTTFSGRRTSLALPRYRALKVGHSFTSHSIKSARSNARFTHRS 60

Query: 61  GRVVCEGQETSSIVPSASEATWQSQVIESGLPVLVEFWAPWCGPCRMIHPVVDELSEEYA 120
           GRVVCEGQETSSIVPSASEATWQSQVIESGLPVLVEFWAPWCGPCRMIHPVVDELSEEYA
Sbjct: 61  GRVVCEGQETSSIVPSASEATWQSQVIESGLPVLVEFWAPWCGPCRMIHPVVDELSEEYA 120

Query: 121 GKFKFYKVNTDEEAGIASQCAIRSIPTAIIFKNGEKKEAIIGAVPKTTLTDIMDKFL 177
           GKFKFYKVNTDEEAGIASQCAIRSIPTAIIFKNGEKKEAIIGAVPKTTLTDIMDKFL
Sbjct: 121 GKFKFYKVNTDEEAGIASQCAIRSIPTAIIFKNGEKKEAIIGAVPKTTLTDIMDKFL 177

[Close]

BLAST of Cp4.1LG01g08570 vs. NCBI nr
Match: KAG7031370.1 (Thioredoxin M4, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 345 bits (885), Expect = 1.43e-119
Identity = 174/177 (98.31%), Postives = 175/177 (98.87%), Query Frame = 0


Query: 1   MATVLDSLALPSSSVLASTTFSGRRTSLALPRYRALKVGHSFTSHSIKSARSNARFTHRS 60
           MATVLDSLALPSSSVLASTTFSGRRTSLALPRYRALKVGHSFTSHSIKSARSNARFTHRS
Sbjct: 1   MATVLDSLALPSSSVLASTTFSGRRTSLALPRYRALKVGHSFTSHSIKSARSNARFTHRS 60

Query: 61  GRVVCEGQETSSIVPSASEATWQSQVIESGLPVLVEFWAPWCGPCRMIHPVVDELSEEYA 120
           GRVVCEGQETSSIVPSASEATWQSQVIESGLPVLVEFWAPWCGPCRMIHPVVDELS+EYA
Sbjct: 61  GRVVCEGQETSSIVPSASEATWQSQVIESGLPVLVEFWAPWCGPCRMIHPVVDELSDEYA 120

Query: 121 GKFKFYKVNTDEEAGIASQCAIRSIPTAIIFKNGEKKEAIIGAVPKTTLTDIMDKFL 177
           GKFKFYKVNTDEEAGIASQCAIRSIPT IIFKNGEKKEAIIGAVPKTTLTD MDKFL
Sbjct: 121 GKFKFYKVNTDEEAGIASQCAIRSIPTVIIFKNGEKKEAIIGAVPKTTLTDSMDKFL 177

[Close]

BLAST of Cp4.1LG01g08570 vs. NCBI nr
Match: XP_022941602.1 (uncharacterized protein LOC111446910 isoform X1 [Cucurbita moschata])

HSP 1 Score: 344 bits (882), Expect = 4.10e-119
Identity = 173/177 (97.74%), Postives = 175/177 (98.87%), Query Frame = 0


Query: 1   MATVLDSLALPSSSVLASTTFSGRRTSLALPRYRALKVGHSFTSHSIKSARSNARFTHRS 60
           MATVLDSLALPSSSVLASTTFSGRRTSLALPRYRALKVGHSFTSHSIKSARSNARFTHRS
Sbjct: 1   MATVLDSLALPSSSVLASTTFSGRRTSLALPRYRALKVGHSFTSHSIKSARSNARFTHRS 60

Query: 61  GRVVCEGQETSSIVPSASEATWQSQVIESGLPVLVEFWAPWCGPCRMIHPVVDELSEEYA 120
           GRVVCEGQETSSIVPSASEATWQSQVIESG+PVLVEFWAPWCGPCRMIHPVVDELS+EYA
Sbjct: 61  GRVVCEGQETSSIVPSASEATWQSQVIESGVPVLVEFWAPWCGPCRMIHPVVDELSDEYA 120

Query: 121 GKFKFYKVNTDEEAGIASQCAIRSIPTAIIFKNGEKKEAIIGAVPKTTLTDIMDKFL 177
           GKFKFYKVNTDEEAGIASQCAIRSIPT IIFKNGEKKEAIIGAVPKTTLTD MDKFL
Sbjct: 121 GKFKFYKVNTDEEAGIASQCAIRSIPTVIIFKNGEKKEAIIGAVPKTTLTDSMDKFL 177

[Close]

BLAST of Cp4.1LG01g08570 vs. NCBI nr
Match: XP_023539221.1 (uncharacterized protein LOC111799921 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 331 bits (849), Expect = 3.46e-114
Identity = 170/177 (96.05%), Postives = 170/177 (96.05%), Query Frame = 0


Query: 1   MATVLDSLALPSSSVLASTTFSGRRTSLALPRYRALKVGHSFTSHSIKSARSNARFTHRS 60
           MATVLDSLALPSSSVLASTTFSGRRTSLALPRYRALKVGHSFTSHSIKSARSNARFTHRS
Sbjct: 1   MATVLDSLALPSSSVLASTTFSGRRTSLALPRYRALKVGHSFTSHSIKSARSNARFTHRS 60

Query: 61  GRVVCEGQETSSIVPSASEATWQSQVIESGLPVLVEFWAPWCGPCRMIHPVVDELSEEYA 120
           GRVVCE       VPSASEATWQSQVIESGLPVLVEFWAPWCGPCRMIHPVVDELSEEYA
Sbjct: 61  GRVVCE-------VPSASEATWQSQVIESGLPVLVEFWAPWCGPCRMIHPVVDELSEEYA 120

Query: 121 GKFKFYKVNTDEEAGIASQCAIRSIPTAIIFKNGEKKEAIIGAVPKTTLTDIMDKFL 177
           GKFKFYKVNTDEEAGIASQCAIRSIPTAIIFKNGEKKEAIIGAVPKTTLTDIMDKFL
Sbjct: 121 GKFKFYKVNTDEEAGIASQCAIRSIPTAIIFKNGEKKEAIIGAVPKTTLTDIMDKFL 170

[Close]

BLAST of Cp4.1LG01g08570 vs. NCBI nr
Match: XP_022941603.1 (uncharacterized protein LOC111446910 isoform X2 [Cucurbita moschata])

HSP 1 Score: 325 bits (833), Expect = 9.51e-112
Identity = 166/177 (93.79%), Postives = 168/177 (94.92%), Query Frame = 0


Query: 1   MATVLDSLALPSSSVLASTTFSGRRTSLALPRYRALKVGHSFTSHSIKSARSNARFTHRS 60
           MATVLDSLALPSSSVLASTTFSGRRTSLALPRYRALKVGHSFTSHSIKSARSNARFTHRS
Sbjct: 1   MATVLDSLALPSSSVLASTTFSGRRTSLALPRYRALKVGHSFTSHSIKSARSNARFTHRS 60

Query: 61  GRVVCEGQETSSIVPSASEATWQSQVIESGLPVLVEFWAPWCGPCRMIHPVVDELSEEYA 120
           GRVVCE       VPSASEATWQSQVIESG+PVLVEFWAPWCGPCRMIHPVVDELS+EYA
Sbjct: 61  GRVVCE-------VPSASEATWQSQVIESGVPVLVEFWAPWCGPCRMIHPVVDELSDEYA 120

Query: 121 GKFKFYKVNTDEEAGIASQCAIRSIPTAIIFKNGEKKEAIIGAVPKTTLTDIMDKFL 177
           GKFKFYKVNTDEEAGIASQCAIRSIPT IIFKNGEKKEAIIGAVPKTTLTD MDKFL
Sbjct: 121 GKFKFYKVNTDEEAGIASQCAIRSIPTVIIFKNGEKKEAIIGAVPKTTLTDSMDKFL 170

[Close]

BLAST of Cp4.1LG01g08570 vs. ExPASy TrEMBL
Match: A0A6J1FMY5 (uncharacterized protein LOC111446910 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111446910 PE=4 SV=1)

HSP 1 Score: 344 bits (882), Expect = 1.99e-119
Identity = 173/177 (97.74%), Postives = 175/177 (98.87%), Query Frame = 0


Query: 1   MATVLDSLALPSSSVLASTTFSGRRTSLALPRYRALKVGHSFTSHSIKSARSNARFTHRS 60
           MATVLDSLALPSSSVLASTTFSGRRTSLALPRYRALKVGHSFTSHSIKSARSNARFTHRS
Sbjct: 1   MATVLDSLALPSSSVLASTTFSGRRTSLALPRYRALKVGHSFTSHSIKSARSNARFTHRS 60

Query: 61  GRVVCEGQETSSIVPSASEATWQSQVIESGLPVLVEFWAPWCGPCRMIHPVVDELSEEYA 120
           GRVVCEGQETSSIVPSASEATWQSQVIESG+PVLVEFWAPWCGPCRMIHPVVDELS+EYA
Sbjct: 61  GRVVCEGQETSSIVPSASEATWQSQVIESGVPVLVEFWAPWCGPCRMIHPVVDELSDEYA 120

Query: 121 GKFKFYKVNTDEEAGIASQCAIRSIPTAIIFKNGEKKEAIIGAVPKTTLTDIMDKFL 177
           GKFKFYKVNTDEEAGIASQCAIRSIPT IIFKNGEKKEAIIGAVPKTTLTD MDKFL
Sbjct: 121 GKFKFYKVNTDEEAGIASQCAIRSIPTVIIFKNGEKKEAIIGAVPKTTLTDSMDKFL 177

[Close]

BLAST of Cp4.1LG01g08570 vs. ExPASy TrEMBL
Match: A0A6J1FSJ8 (uncharacterized protein LOC111446910 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111446910 PE=4 SV=1)

HSP 1 Score: 325 bits (833), Expect = 4.60e-112
Identity = 166/177 (93.79%), Postives = 168/177 (94.92%), Query Frame = 0


Query: 1   MATVLDSLALPSSSVLASTTFSGRRTSLALPRYRALKVGHSFTSHSIKSARSNARFTHRS 60
           MATVLDSLALPSSSVLASTTFSGRRTSLALPRYRALKVGHSFTSHSIKSARSNARFTHRS
Sbjct: 1   MATVLDSLALPSSSVLASTTFSGRRTSLALPRYRALKVGHSFTSHSIKSARSNARFTHRS 60

Query: 61  GRVVCEGQETSSIVPSASEATWQSQVIESGLPVLVEFWAPWCGPCRMIHPVVDELSEEYA 120
           GRVVCE       VPSASEATWQSQVIESG+PVLVEFWAPWCGPCRMIHPVVDELS+EYA
Sbjct: 61  GRVVCE-------VPSASEATWQSQVIESGVPVLVEFWAPWCGPCRMIHPVVDELSDEYA 120

Query: 121 GKFKFYKVNTDEEAGIASQCAIRSIPTAIIFKNGEKKEAIIGAVPKTTLTDIMDKFL 177
           GKFKFYKVNTDEEAGIASQCAIRSIPT IIFKNGEKKEAIIGAVPKTTLTD MDKFL
Sbjct: 121 GKFKFYKVNTDEEAGIASQCAIRSIPTVIIFKNGEKKEAIIGAVPKTTLTDSMDKFL 170

[Close]

BLAST of Cp4.1LG01g08570 vs. ExPASy TrEMBL
Match: A0A6J1IKG3 (uncharacterized protein LOC111477886 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111477886 PE=4 SV=1)

HSP 1 Score: 318 bits (815), Expect = 3.26e-109
Identity = 160/177 (90.40%), Postives = 168/177 (94.92%), Query Frame = 0


Query: 1   MATVLDSLALPSSSVLASTTFSGRRTSLALPRYRALKVGHSFTSHSIKSARSNARFTHRS 60
           MATVL SLALPSSSVLASTTFSGRRTSL LPRYRALK+GHSFTSHS+KSARSNARFTHRS
Sbjct: 1   MATVLGSLALPSSSVLASTTFSGRRTSLVLPRYRALKIGHSFTSHSVKSARSNARFTHRS 60

Query: 61  GRVVCEGQETSSIVPSASEATWQSQVIESGLPVLVEFWAPWCGPCRMIHPVVDELSEEYA 120
            RVVC+GQETSSIVPSASEATWQSQVIES +PVLVEFWAPWCGPCRMIHPVVDELS+EYA
Sbjct: 61  DRVVCDGQETSSIVPSASEATWQSQVIESRVPVLVEFWAPWCGPCRMIHPVVDELSKEYA 120

Query: 121 GKFKFYKVNTDEEAGIASQCAIRSIPTAIIFKNGEKKEAIIGAVPKTTLTDIMDKFL 177
           GKFKFYKVNTD+EA IAS+ AIRS+PT IIFKNGEKKEAIIGAV KTTLTD MDKFL
Sbjct: 121 GKFKFYKVNTDQEAEIASRYAIRSVPTVIIFKNGEKKEAIIGAVTKTTLTDSMDKFL 177

[Close]

BLAST of Cp4.1LG01g08570 vs. ExPASy TrEMBL
Match: A0A6J1IKH3 (uncharacterized protein LOC111477886 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111477886 PE=4 SV=1)

HSP 1 Score: 299 bits (766), Expect = 7.54e-102
Identity = 153/177 (86.44%), Postives = 161/177 (90.96%), Query Frame = 0


Query: 1   MATVLDSLALPSSSVLASTTFSGRRTSLALPRYRALKVGHSFTSHSIKSARSNARFTHRS 60
           MATVL SLALPSSSVLASTTFSGRRTSL LPRYRALK+GHSFTSHS+KSARSNARFTHRS
Sbjct: 1   MATVLGSLALPSSSVLASTTFSGRRTSLVLPRYRALKIGHSFTSHSVKSARSNARFTHRS 60

Query: 61  GRVVCEGQETSSIVPSASEATWQSQVIESGLPVLVEFWAPWCGPCRMIHPVVDELSEEYA 120
            RVVC+       VPSASEATWQSQVIES +PVLVEFWAPWCGPCRMIHPVVDELS+EYA
Sbjct: 61  DRVVCD-------VPSASEATWQSQVIESRVPVLVEFWAPWCGPCRMIHPVVDELSKEYA 120

Query: 121 GKFKFYKVNTDEEAGIASQCAIRSIPTAIIFKNGEKKEAIIGAVPKTTLTDIMDKFL 177
           GKFKFYKVNTD+EA IAS+ AIRS+PT IIFKNGEKKEAIIGAV KTTLTD MDKFL
Sbjct: 121 GKFKFYKVNTDQEAEIASRYAIRSVPTVIIFKNGEKKEAIIGAVTKTTLTDSMDKFL 170

[Close]

BLAST of Cp4.1LG01g08570 vs. ExPASy TrEMBL
Match: A0A6J1J2W9 (uncharacterized protein LOC111482904 OS=Cucurbita maxima OX=3661 GN=LOC111482904 PE=4 SV=1)

HSP 1 Score: 280 bits (716), Expect = 3.99e-94
Identity = 136/177 (76.84%), Postives = 157/177 (88.70%), Query Frame = 0


Query: 1   MATVLDSLALPSSSVLASTTFSGRRTSLALPRYRALKVGHSFTSHSIKSARSNARFTHRS 60
           MATVLDSL LP SS LAST FSGRR+S+ALP+YR LK+GHSFTS SI+SARSNARF  RS
Sbjct: 1   MATVLDSLTLPCSSALASTAFSGRRSSVALPQYRGLKIGHSFTSQSIRSARSNARFAQRS 60

Query: 61  GRVVCEGQETSSIVPSASEATWQSQVIESGLPVLVEFWAPWCGPCRMIHPVVDELSEEYA 120
           GR+VCE QET++IVP+ASEATW S V++S LPVLVEFWAPWCGPCRMIHP+VDELS++YA
Sbjct: 61  GRIVCEAQETAAIVPAASEATWDSLVLKSELPVLVEFWAPWCGPCRMIHPIVDELSKQYA 120

Query: 121 GKFKFYKVNTDEEAGIASQCAIRSIPTAIIFKNGEKKEAIIGAVPKTTLTDIMDKFL 177
           GKFKFYKV+TD  +G+AS+  IRSIPT IIFK+GEKKEAIIGAVPK TLT  ++KFL
Sbjct: 121 GKFKFYKVDTDSNSGVASRYGIRSIPTVIIFKDGEKKEAIIGAVPKATLTASIEKFL 177

[Close]

BLAST of Cp4.1LG01g08570 vs. TAIR 10
Match: AT3G15360.1 (thioredoxin M-type 4 )

HSP 1 Score: 175.3 bits (443), Expect = 4.5e-44
Identity = 92/191 (48.17%), Postives = 127/191 (66.49%), Query Frame = 0


Query: 1   MATVLDS----------LALPSSSVLASTTFSGRRTSLA-LPRYRALKVGHSFTSHSIKS 60
           MA++LDS          +A   SS  A+ + S RR S A    +R LK   S  + S   
Sbjct: 1   MASLLDSVTVTRVFSLPIAASVSSSSAAPSVSRRRISPARFLEFRGLKSSRSLVTQSASL 60

Query: 61  ARSNARFTHRSGRVVCEGQETSSI---VPSASEATWQSQVIESGLPVLVEFWAPWCGPCR 120
             +      R GR+ CE Q+T++    VP+ S++ WQ++V+ES +PVLVEFWAPWCGPCR
Sbjct: 61  GANRRTRIARGGRIACEAQDTTAAAVEVPNLSDSEWQTKVLESDVPVLVEFWAPWCGPCR 120

Query: 121 MIHPVVDELSEEYAGKFKFYKVNTDEEAGIASQCAIRSIPTAIIFKNGEKKEAIIGAVPK 178
           MIHP+VD+L++++AGKFKFYK+NTDE    A++  IRS+PT IIFK GEKK++IIGAVP+
Sbjct: 121 MIHPIVDQLAKDFAGKFKFYKINTDESPNTANRYGIRSVPTVIIFKGGEKKDSIIGAVPR 180

[Close]

BLAST of Cp4.1LG01g08570 vs. TAIR 10
Match: AT4G03520.1 (Thioredoxin superfamily protein )

HSP 1 Score: 157.9 bits (398), Expect = 7.4e-39
Identity = 78/165 (47.27%), Postives = 109/165 (66.06%), Query Frame = 0


Query: 13  SSVLASTTFSGRRTSLALPRYRALKVGHSFTSHSIKSARSNARFTHRSGRVVCEGQETSS 72
           SS  ++++ S RR    LP    L++  S +  S+ S     R +     VVCE QET++
Sbjct: 22  SSSPSASSLSSRRMFAVLPESSGLRIRLSLSPASLTSIH-QPRVSRLRRAVVCEAQETTT 81

Query: 73  IVPSASEATWQSQVIESGLPVLVEFWAPWCGPCRMIHPVVDELSEEYAGKFKFYKVNTDE 132
            +   +++TW S V+++  PV+V+FWAPWCGPC+MI P+V++L++ Y GK KFYK+NTDE
Sbjct: 82  DIQVVNDSTWDSLVLKATGPVVVDFWAPWCGPCKMIDPLVNDLAQHYTGKIKFYKLNTDE 141

Query: 133 EAGIASQCAIRSIPTAIIFKNGEKKEAIIGAVPKTTLTDIMDKFL 178
                 Q  +RSIPT +IF  GEKK+ IIGAVPKTTLT  +DKFL
Sbjct: 142 SPNTPGQYGVRSIPTIMIFVGGEKKDTIIGAVPKTTLTSSLDKFL 185

[Close]

BLAST of Cp4.1LG01g08570 vs. TAIR 10
Match: AT1G03680.1 (thioredoxin M-type 1 )

HSP 1 Score: 156.4 bits (394), Expect = 2.2e-38
Identity = 75/158 (47.47%), Postives = 106/158 (67.09%), Query Frame = 0


Query: 20  TFSGRRTSLALPRYRALKVGHSFTSHSIKSARSNARFTHRSGRVVCEGQETSSIVPSASE 79
           +FS R+    LP    L+     T  S+ S   N+R +     V+CE Q+T++ +P  ++
Sbjct: 27  SFSTRQMFSVLPESSGLR-----TRVSLSSLSKNSRVSRLRRGVICEAQDTATGIPVVND 86

Query: 80  ATWQSQVIESGLPVLVEFWAPWCGPCRMIHPVVDELSEEYAGKFKFYKVNTDEEAGIASQ 139
           +TW S V+++  PV V+FWAPWCGPC+MI P+V+EL+++YAG+FKFYK+NTDE      Q
Sbjct: 87  STWDSLVLKADEPVFVDFWAPWCGPCKMIDPIVNELAQKYAGQFKFYKLNTDESPATPGQ 146

Query: 140 CAIRSIPTAIIFKNGEKKEAIIGAVPKTTLTDIMDKFL 178
             +RSIPT +IF NGEKK+ IIGAV K TL   ++KFL
Sbjct: 147 YGVRSIPTIMIFVNGEKKDTIIGAVSKDTLATSINKFL 179

[Close]

BLAST of Cp4.1LG01g08570 vs. TAIR 10
Match: AT2G15570.1 (Thioredoxin superfamily protein )

HSP 1 Score: 109.8 bits (273), Expect = 2.3e-24
Identity = 41/100 (41.00%), Postives = 70/100 (70.00%), Query Frame = 0


Query: 78  SEATWQSQVIESGLPVLVEFWAPWCGPCRMIHPVVDELSEEYAGKFKFYKVNTDEEAGIA 137
           ++ +W+  V++S  PVLVEF+  WCGPCRM+H ++DE++ +YAGK   Y +N D +  +A
Sbjct: 72  TQRSWEDSVLKSETPVLVEFYTSWCGPCRMVHRIIDEIAGDYAGKLNCYLLNADNDLPVA 131

Query: 138 SQCAIRSIPTAIIFKNGEKKEAIIGAVPKTTLTDIMDKFL 178
            +  I+++P  ++FKNGEK+E+I+G +PK      +++ L
Sbjct: 132 EEYEIKAVPVVLLFKNGEKRESIMGTMPKEFYISAIERVL 171

[Close]

BLAST of Cp4.1LG01g08570 vs. TAIR 10
Match: AT2G15570.2 (Thioredoxin superfamily protein )

HSP 1 Score: 109.8 bits (273), Expect = 2.3e-24
Identity = 42/107 (39.25%), Postives = 71/107 (66.36%), Query Frame = 0


Query: 71  SSIVPSASEATWQSQVIESGLPVLVEFWAPWCGPCRMIHPVVDELSEEYAGKFKFYKVNT 130
           S      ++ +W+  V++S  PVLVEF+  WCGPCRM+H ++DE++ +YAGK   Y +N 
Sbjct: 66  SRAAAEVTQRSWEDSVLKSETPVLVEFYTSWCGPCRMVHRIIDEIAGDYAGKLNCYLLNA 125

Query: 131 DEEAGIASQCAIRSIPTAIIFKNGEKKEAIIGAVPKTTLTDIMDKFL 178
           D +  +A +  I+++P  ++FKNGEK+E+I+G +PK      +++ L
Sbjct: 126 DNDLPVAEEYEIKAVPVVLLFKNGEKRESIMGTMPKEFYISAIERVL 172

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g08570 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SEU6	6.3e-43	48.17	Thioredoxin M4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g15360 PE=2 ...	[more]
P07591	1.6e-38	52.03	Thioredoxin M-type, chloroplastic OS=Spinacia oleracea OX=3562 PE=1 SV=2	[more]
Q6H7E4	2.1e-38	61.90	Thioredoxin M1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0...	[more]
Q7X8R5	3.6e-38	50.00	Thioredoxin M2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0...	[more]
Q9SEU8	1.0e-37	47.27	Thioredoxin M2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TRXM2 PE=1 SV=2	[more]

BLAST of Cp4.1LG01g08570 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023539212.1	1.49e-121	100.00	uncharacterized protein LOC111799921 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
KAG7031370.1	1.43e-119	98.31	Thioredoxin M4, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosper...	[more]
XP_022941602.1	4.10e-119	97.74	uncharacterized protein LOC111446910 isoform X1 [Cucurbita moschata]	[more]
XP_023539221.1	3.46e-114	96.05	uncharacterized protein LOC111799921 isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_022941603.1	9.51e-112	93.79	uncharacterized protein LOC111446910 isoform X2 [Cucurbita moschata]	[more]

BLAST of Cp4.1LG01g08570 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FMY5	1.99e-119	97.74	uncharacterized protein LOC111446910 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1FSJ8	4.60e-112	93.79	uncharacterized protein LOC111446910 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1IKG3	3.26e-109	90.40	uncharacterized protein LOC111477886 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1IKH3	7.54e-102	86.44	uncharacterized protein LOC111477886 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1J2W9	3.99e-94	76.84	uncharacterized protein LOC111482904 OS=Cucurbita maxima OX=3661 GN=LOC111482904...	[more]

BLAST of Cp4.1LG01g08570 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G15360.1	4.5e-44	48.17	thioredoxin M-type 4	[more]
AT4G03520.1	7.4e-39	47.27	Thioredoxin superfamily protein	[more]
AT1G03680.1	2.2e-38	47.47	thioredoxin M-type 1	[more]
AT2G15570.1	2.3e-24	41.00	Thioredoxin superfamily protein	[more]
AT2G15570.2	2.3e-24	39.25	Thioredoxin superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00421	THIOREDOXIN	coord: 141..152 score: 38.43 coord: 93..101 score: 64.57 coord: 101..110 score: 61.5
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 74..177 e-value: 2.0E-33 score: 116.6
None	No IPR available	PANTHER	PTHR45663:SF24	THIOREDOXIN-1-LIKE	coord: 9..177
None	No IPR available	PANTHER	PTHR45663	GEO12009P1	coord: 9..177
None	No IPR available	CDD	cd02947	TRX_family	coord: 85..174 e-value: 4.64483E-38 score: 124.208
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 77..174 e-value: 1.6E-29 score: 101.9
IPR013766	Thioredoxin domain	PROSITE	PS51352	THIOREDOXIN_2	coord: 68..177 score: 14.010843
IPR005746	Thioredoxin	TIGRFAM	TIGR01068	TIGR01068	coord: 79..176 e-value: 5.2E-35 score: 117.6
IPR017937	Thioredoxin, conserved site	PROSITE	PS00194	THIOREDOXIN_1	coord: 94..112
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 74..177

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g08570.1	Cp4.1LG01g08570.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006662	glycerol ether metabolic process
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0016671	oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor
molecular_function	GO:0015035	protein-disulfide reductase activity