Cp4.1LG01g08550 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG01g08550
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Expansin
Location	Cp4.1LG01: 4910298 .. 4911472 (+)
RNA-Seq Expression	Cp4.1LG01g08550
Synteny	Cp4.1LG01g08550

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CCATGGTTTATGGGAATGGTGGGTTTGTTTGGGTTTTGTATGCGTTGTTTTTCATGGTGGTCGGTGGGTCCTTCGTCCATGGGGACGGTGGTGCTTGGCTTCATGCTCATGCAACTTTCTATGGAGCTGATCAAAACCCTACTAGCCTTGGTGAGTCTTTGAATGAAATAATTATTAAATGAGATTTAAAATATATATATATATATATATATTTTGAATTAAAAAATTAACTTTTAAAAATATTTCTAAAAGGTACTCTAAAATTAAGAAAATTGTTAGTACACATGTTTCCAATAATTTAAGAAAATGCACAATTTATTAATCATACATATCTGGCAATCAACTTTAATATTTGAACATTATGCCATTTAATCATTTTCTTGATATATATATATATATATATAAAAGAAAATAATATTATTAATATTGTAATAAAGTTATGTGATTATTTATTAATCAGGAGGAGCATGTGGTTACGACAATACATTTCATGCCGGATTTGGAATAAACACGGCGGCGGTGAGCGGCGCACTTTTCAGAGGAGGAGAGGCTTGCGGCGCTTGCTTCCTAGTAATTTGCAACTACAACGTGGACCCCAAGTGGTGTCTCCGCCGCCGCGCCGTCGCCATCACCGCCACAAACTTCTGCCCCTCCAATAACAACGGGGGCTGGTGCGACCCACCTCGCGCGCACTTCGACATGTCGTCACCTGCCTTTCTTACCATTGCTCGGCAAGGCAACGAAGGGATCGTCCCTGTCCTTTACAAGAGGTATAACATGATACAATATTTAGTAAGTTGGTAGAAATTTAAATAAAACGTTCAATTTTTTTTAATATATAGTTTTAAATGTTGTATTTTTAAAGGGTAAGTTGTAGAAGGAAGGGAGGAGTTCGATTCACTTTGAGAGGACAATCAAACTTCAATATGGTGATGATATCGAACGTCGGTGGCAGTGGCGACGTGAAGGCTGCATGGGTTAAAGGGTCAAGGACGAGGACGTGGATGCCCATGCATCGTAATTGGGGGGCAAACTGGCAAGCCAATGTCGACCTTCGAAACCAAAGAATGTCGTTTAAGGTTACTCTAATAGATGGGAGGACATTGGAGTTTGTCAATGTGGTTCCTTCCTCTTGGAGGTTTGGACAGACGTTTTCTTCCATGATTCAGTTTTCT

mRNA sequence

CCATGGTTTATGGGAATGGTGGGTTTGTTTGGGTTTTGTATGCGTTGTTTTTCATGGTGGTCGGTGGGTCCTTCGTCCATGGGGACGGTGGTGCTTGGCTTCATGCTCATGCAACTTTCTATGGAGCTGATCAAAACCCTACTAGCCTTGGAGGAGCATGTGGTTACGACAATACATTTCATGCCGGATTTGGAATAAACACGGCGGCGGTGAGCGGCGCACTTTTCAGAGGAGGAGAGGCTTGCGGCGCTTGCTTCCTAGTAATTTGCAACTACAACGTGGACCCCAAGTGGTGTCTCCGCCGCCGCGCCGTCGCCATCACCGCCACAAACTTCTGCCCCTCCAATAACAACGGGGGCTGGTGCGACCCACCTCGCGCGCACTTCGACATGTCGTCACCTGCCTTTCTTACCATTGCTCGGCAAGGCAACGAAGGGATCGTCCCTGTCCTTTACAAGAGGGTAAGTTGTAGAAGGAAGGGAGGAGTTCGATTCACTTTGAGAGGACAATCAAACTTCAATATGGTGATGATATCGAACGTCGGTGGCAGTGGCGACGTGAAGGCTGCATGGGTTAAAGGGTCAAGGACGAGGACGTGGATGCCCATGCATCGTAATTGGGGGGCAAACTGGCAAGCCAATGTCGACCTTCGAAACCAAAGAATGTCGTTTAAGGTTACTCTAATAGATGGGAGGACATTGGAGTTTGTCAATGTGGTTCCTTCCTCTTGGAGGTTTGGACAGACGTTTTCTTCCATGATTCAGTTTTCT

Coding sequence (CDS)

ATGGTTTATGGGAATGGTGGGTTTGTTTGGGTTTTGTATGCGTTGTTTTTCATGGTGGTCGGTGGGTCCTTCGTCCATGGGGACGGTGGTGCTTGGCTTCATGCTCATGCAACTTTCTATGGAGCTGATCAAAACCCTACTAGCCTTGGAGGAGCATGTGGTTACGACAATACATTTCATGCCGGATTTGGAATAAACACGGCGGCGGTGAGCGGCGCACTTTTCAGAGGAGGAGAGGCTTGCGGCGCTTGCTTCCTAGTAATTTGCAACTACAACGTGGACCCCAAGTGGTGTCTCCGCCGCCGCGCCGTCGCCATCACCGCCACAAACTTCTGCCCCTCCAATAACAACGGGGGCTGGTGCGACCCACCTCGCGCGCACTTCGACATGTCGTCACCTGCCTTTCTTACCATTGCTCGGCAAGGCAACGAAGGGATCGTCCCTGTCCTTTACAAGAGGGTAAGTTGTAGAAGGAAGGGAGGAGTTCGATTCACTTTGAGAGGACAATCAAACTTCAATATGGTGATGATATCGAACGTCGGTGGCAGTGGCGACGTGAAGGCTGCATGGGTTAAAGGGTCAAGGACGAGGACGTGGATGCCCATGCATCGTAATTGGGGGGCAAACTGGCAAGCCAATGTCGACCTTCGAAACCAAAGAATGTCGTTTAAGGTTACTCTAATAGATGGGAGGACATTGGAGTTTGTCAATGTGGTTCCTTCCTCTTGGAGGTTTGGACAGACGTTTTCTTCCATGATTCAGTTTTCT

Protein sequence

MVYGNGGFVWVLYALFFMVVGGSFVHGDGGAWLHAHATFYGADQNPTSLGGACGYDNTFHAGFGINTAAVSGALFRGGEACGACFLVICNYNVDPKWCLRRRAVAITATNFCPSNNNGGWCDPPRAHFDMSSPAFLTIARQGNEGIVPVLYKRVSCRRKGGVRFTLRGQSNFNMVMISNVGGSGDVKAAWVKGSRTRTWMPMHRNWGANWQANVDLRNQRMSFKVTLIDGRTLEFVNVVPSSWRFGQTFSSMIQFS

Homology

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BLAST of Cp4.1LG01g08550 vs. ExPASy Swiss-Prot
Match: Q9LDJ3 (Expansin-A12 OS=Arabidopsis thaliana OX=3702 GN=EXPA12 PE=2 SV=1)

HSP 1 Score: 347.4 bits (890), Expect = 1.3e-94
Identity = 152/220 (69.09%), Postives = 182/220 (82.73%), Query Frame = 0


Query: 32  WLHAHATFYGADQNPTSLGGACGYDNTFHAGFGINTAAVSGALFRGGEACGACFLVICNY 91
           W+ AHAT+YG + +P SLGGACGYDN +HAGFG +TAA+SG LFR GE+CG C+ V C++
Sbjct: 27  WIRAHATYYGVNDSPASLGGACGYDNPYHAGFGAHTAALSGELFRSGESCGGCYQVRCDF 86

Query: 92  NVDPKWCLRRRAVAITATNFCPSNNNGGWCDPPRAHFDMSSPAFLTIARQGNEGIVPVLY 151
             DPKWCLR  AV +TATNFCP+NNN GWC+ PR HFDMSSPAF  IAR+GNEGIVPV Y
Sbjct: 87  PADPKWCLRGAAVTVTATNFCPTNNNNGWCNLPRHHFDMSSPAFFRIARRGNEGIVPVFY 146

Query: 152 KRVSCRRKGGVRFTLRGQSNFNMVMISNVGGSGDVKAAWVKGSRTRTWMPMHRNWGANWQ 211
           +RV C+R+GGVRFT+RGQ NFNMVMISNVGG G V++  V+GS+ +TW+ M RNWGANWQ
Sbjct: 147 RRVGCKRRGGVRFTMRGQGNFNMVMISNVGGGGSVRSVAVRGSKGKTWLQMTRNWGANWQ 206

Query: 212 ANVDLRNQRMSFKVTLIDGRTLEFVNVVPSSWRFGQTFSS 252
           ++ DLR QR+SFKVTL D +T  F+NVVPSSW FGQTFSS
Sbjct: 207 SSGDLRGQRLSFKVTLTDSKTQTFLNVVPSSWWFGQTFSS 246

[Close]

BLAST of Cp4.1LG01g08550 vs. ExPASy Swiss-Prot
Match: Q9ZSI1 (Putative expansin-A17 OS=Arabidopsis thaliana OX=3702 GN=EXPA17 PE=2 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 2.6e-74
Identity = 126/250 (50.40%), Postives = 170/250 (68.00%), Query Frame = 0


Query: 11  VLYALFFMVVGGSFVHGDGGAWLHAHATFYGADQNPTSLGGACGYDNTFHAGFGINTAAV 70
           +L A+ F  +    +      WL AHATFYG      ++GGACGY N +  G+  NTAA+
Sbjct: 7   LLVAMIFSTMFFMKISSVSAGWLQAHATFYGGSDASGTMGGACGYGNLYTDGYKTNTAAL 66

Query: 71  SGALFRGGEACGACFLVICNYNVDPKWCLRRRAVAITATNFCPSN-----NNGGWCDPPR 130
           S ALF  G++CG C+ ++C+    P+WCL+ +++ ITATNFCP N     +NGGWC+PPR
Sbjct: 67  STALFNDGKSCGGCYQILCDATKVPQWCLKGKSITITATNFCPPNFAQASDNGGWCNPPR 126

Query: 131 AHFDMSSPAFLTIARQGNEGIVPVLYKRVSCRRKGGVRFTLRGQSNFNMVMISNVGGSGD 190
            HFDM+ PAFLTIA+    GIVP+LYK+V CRR GG+RFT+ G++ F +V+ISNV G G+
Sbjct: 127 PHFDMAQPAFLTIAKY-KAGIVPILYKKVGCRRSGGMRFTINGRNYFELVLISNVAGGGE 186

Query: 191 VKAAWVKGSRTRTWMPMHRNWGANWQANVDLRNQRMSFKVTLIDGRTLEFVNVVPSSWRF 250
           +   W+KGS++  W  M RNWGAN+Q+N  L  Q +SFKV L DG     +NVVPS+WRF
Sbjct: 187 ISKVWIKGSKSNKWETMSRNWGANYQSNTYLNGQSLSFKVQLSDGSIKAALNVVPSNWRF 246

Query: 251 GQTFSSMIQF 256
           GQ+F S + F
Sbjct: 247 GQSFKSNVNF 255

[Close]

BLAST of Cp4.1LG01g08550 vs. ExPASy Swiss-Prot
Match: O22874 (Expansin-A8 OS=Arabidopsis thaliana OX=3702 GN=EXPA8 PE=2 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 1.9e-72
Identity = 127/229 (55.46%), Postives = 163/229 (71.18%), Query Frame = 0


Query: 26  HGDGGAWLHAHATFYGADQNPTSLGGACGYDNTFHAGFGINTAAVSGALFRGGEACGACF 85
           HGD G W   HATFYG +    ++GGACGY N +  G+G NTAA+S ALF  G  CGAC+
Sbjct: 24  HGDDGGWQGGHATFYGGEDASGTMGGACGYGNLYGQGYGTNTAALSTALFNNGLTCGACY 83

Query: 86  LVICNYNVDPKWCLRRRAVAITATNFCP-----SNNNGGWCDPPRAHFDMSSPAFLTIAR 145
            + C  N DP+WCL    + +TATNFCP     SN+NGGWC+PP  HFD++ PAFL IA 
Sbjct: 84  EMKC--NDDPRWCL-GSTITVTATNFCPPNPGLSNDNGGWCNPPLQHFDLAEPAFLQIA- 143

Query: 146 QGNEGIVPVLYKRVSCRRKGGVRFTLRGQSNFNMVMISNVGGSGDVKAAWVKGSRTRTWM 205
           Q   GIVPV ++RV C +KGG+RFT+ G S FN+V+ISNVGG+GDV A  +KGS+T++W 
Sbjct: 144 QYRAGIVPVSFRRVPCMKKGGIRFTINGHSYFNLVLISNVGGAGDVHAVSIKGSKTQSWQ 203

Query: 206 PMHRNWGANWQANVDLRNQRMSFKVTLIDGRTLEFVNVVPSSWRFGQTF 250
            M RNWG NWQ+N  + +Q +SF+VT  DGRTL   +V PS+W+FGQT+
Sbjct: 204 AMSRNWGQNWQSNSYMNDQSLSFQVTTSDGRTLVSNDVAPSNWQFGQTY 248

[Close]

BLAST of Cp4.1LG01g08550 vs. ExPASy Swiss-Prot
Match: Q9LDR9 (Expansin-A10 OS=Arabidopsis thaliana OX=3702 GN=EXPA10 PE=2 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 6.7e-70
Identity = 131/252 (51.98%), Postives = 169/252 (67.06%), Query Frame = 0


Query: 4   GNGGFVWVLYALFFMVVGGSFVHGDGGAWLHAHATFYGADQNPTSLGGACGYDNTFHAGF 63
           G+ GF+     +  + V  S V G GG W++AHATFYG      ++GGACGY N +  G+
Sbjct: 2   GHLGFL----VMIMVGVMASSVSGYGGGWINAHATFYGGGDASGTMGGACGYGNLYSQGY 61

Query: 64  GINTAAVSGALFRGGEACGACFLVICNYNVDPKWCLRRRAVAITATNFCP-----SNNNG 123
           G +TAA+S ALF  G +CG+CF + C    D KWCL   ++ +TATNFCP     +NNNG
Sbjct: 62  GTSTAALSTALFNNGLSCGSCFEIRCEN--DGKWCL-PGSIVVTATNFCPPNNALANNNG 121

Query: 124 GWCDPPRAHFDMSSPAFLTIARQGNEGIVPVLYKRVSCRRKGGVRFTLRGQSNFNMVMIS 183
           GWC+PP  HFD++ P F  IA Q   GIVPV Y+RV CRR+GG+RFT+ G S FN+V+I+
Sbjct: 122 GWCNPPLEHFDLAQPVFQRIA-QYRAGIVPVSYRRVPCRRRGGIRFTINGHSYFNLVLIT 181

Query: 184 NVGGSGDVKAAWVKGSRTRTWMPMHRNWGANWQANVDLRNQRMSFKVTLIDGRTLEFVNV 243
           NVGG+GDV +A +KGSRT  W  M RNWG NWQ+N  L  Q +SFKVT  DGRT+   N 
Sbjct: 182 NVGGAGDVHSAAIKGSRT-VWQAMSRNWGQNWQSNSYLNGQALSFKVTTSDGRTVVSFNA 241

Query: 244 VPSSWRFGQTFS 251
            P+ W +GQTF+
Sbjct: 242 APAGWSYGQTFA 244

[Close]

BLAST of Cp4.1LG01g08550 vs. ExPASy Swiss-Prot
Match: Q4PR50 (Expansin-A15 OS=Oryza sativa subsp. japonica OX=39947 GN=EXPA15 PE=2 SV=2)

HSP 1 Score: 262.3 bits (669), Expect = 5.7e-69
Identity = 122/247 (49.39%), Postives = 165/247 (66.80%), Query Frame = 0


Query: 15  LFFMVVGGSFVHGDGGAWLHAHATFYGADQNPTSLGGACGYDNTFHAGFGINTAAVSGAL 74
           L  ++   S +      W    ATFYG      ++GGACGY N + +G+G NTAA+S AL
Sbjct: 15  LVVVIAAASLIAPTTAGWSSGTATFYGGSDASGTMGGACGYGNLYWSGYGTNTAALSSAL 74

Query: 75  FRGGEACGACFLVICNYNVDPKWCLRRRAVAITATNFCP-----SNNNGGWCDPPRAHFD 134
           F  G +CG C+ + C++  +P+WCL+ R V IT TN CP     S+N+GGWC+PPR HFD
Sbjct: 75  FNDGASCGQCYQIACDHQAEPRWCLQGRTVTITGTNLCPPNYALSSNDGGWCNPPRTHFD 134

Query: 135 MSSPAFLTIARQGNEGIVPVLYKRVSCRRKGGVRFTLRGQSNFNMVMISNVGGSGDVKAA 194
           M+ PA+L I      GIVPVLY+RV C ++GGVRFT+ G + F +V+ISNV GSG +++ 
Sbjct: 135 MAEPAWLQIGIY-KAGIVPVLYQRVPCVKQGGVRFTMGGFNYFELVLISNVAGSGSIQSV 194

Query: 195 WVKGSRTRTWMPMHRNWGANWQANVDLRNQRMSFKVTLIDGRTLEFVNVVPSSWRFGQTF 254
           WVKG  T   MP+ RNWGANWQ++  L  Q ++F VT   G+TL F N+VP+ W+FGQ+F
Sbjct: 195 WVKGPNTDR-MPLSRNWGANWQSHAGLVGQTLTFGVTSTGGQTLVFQNIVPAWWKFGQSF 254

Query: 255 SSMIQFS 257
           SS +QFS
Sbjct: 255 SSNLQFS 259

[Close]

BLAST of Cp4.1LG01g08550 vs. NCBI nr
Match: XP_023539200.1 (expansin-A12 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 540 bits (1392), Expect = 3.52e-194
Identity = 256/256 (100.00%), Postives = 256/256 (100.00%), Query Frame = 0


Query: 1   MVYGNGGFVWVLYALFFMVVGGSFVHGDGGAWLHAHATFYGADQNPTSLGGACGYDNTFH 60
           MVYGNGGFVWVLYALFFMVVGGSFVHGDGGAWLHAHATFYGADQNPTSLGGACGYDNTFH
Sbjct: 5   MVYGNGGFVWVLYALFFMVVGGSFVHGDGGAWLHAHATFYGADQNPTSLGGACGYDNTFH 64

Query: 61  AGFGINTAAVSGALFRGGEACGACFLVICNYNVDPKWCLRRRAVAITATNFCPSNNNGGW 120
           AGFGINTAAVSGALFRGGEACGACFLVICNYNVDPKWCLRRRAVAITATNFCPSNNNGGW
Sbjct: 65  AGFGINTAAVSGALFRGGEACGACFLVICNYNVDPKWCLRRRAVAITATNFCPSNNNGGW 124

Query: 121 CDPPRAHFDMSSPAFLTIARQGNEGIVPVLYKRVSCRRKGGVRFTLRGQSNFNMVMISNV 180
           CDPPRAHFDMSSPAFLTIARQGNEGIVPVLYKRVSCRRKGGVRFTLRGQSNFNMVMISNV
Sbjct: 125 CDPPRAHFDMSSPAFLTIARQGNEGIVPVLYKRVSCRRKGGVRFTLRGQSNFNMVMISNV 184

Query: 181 GGSGDVKAAWVKGSRTRTWMPMHRNWGANWQANVDLRNQRMSFKVTLIDGRTLEFVNVVP 240
           GGSGDVKAAWVKGSRTRTWMPMHRNWGANWQANVDLRNQRMSFKVTLIDGRTLEFVNVVP
Sbjct: 185 GGSGDVKAAWVKGSRTRTWMPMHRNWGANWQANVDLRNQRMSFKVTLIDGRTLEFVNVVP 244

Query: 241 SSWRFGQTFSSMIQFS 256
           SSWRFGQTFSSMIQFS
Sbjct: 245 SSWRFGQTFSSMIQFS 260

[Close]

BLAST of Cp4.1LG01g08550 vs. NCBI nr
Match: KAG6600731.1 (Expansin-A12, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 533 bits (1372), Expect = 3.95e-191
Identity = 249/256 (97.27%), Postives = 255/256 (99.61%), Query Frame = 0


Query: 1   MVYGNGGFVWVLYALFFMVVGGSFVHGDGGAWLHAHATFYGADQNPTSLGGACGYDNTFH 60
           M+YGNGG VWVL+ALFFMVVGGSFVHGDGGAWLHAHATFYGADQNPTSLGGACGYDNTFH
Sbjct: 5   MIYGNGGLVWVLHALFFMVVGGSFVHGDGGAWLHAHATFYGADQNPTSLGGACGYDNTFH 64

Query: 61  AGFGINTAAVSGALFRGGEACGACFLVICNYNVDPKWCLRRRAVAITATNFCPSNNNGGW 120
           AGFGINTAAVSGALFRGGEACGACFLVICNYNVDPKWCLRRRAVAITATNFCPSNNNGGW
Sbjct: 65  AGFGINTAAVSGALFRGGEACGACFLVICNYNVDPKWCLRRRAVAITATNFCPSNNNGGW 124

Query: 121 CDPPRAHFDMSSPAFLTIARQGNEGIVPVLYKRVSCRRKGGVRFTLRGQSNFNMVMISNV 180
           CDPPRAHFDMSSPAFLTIARQGNEGIVPVLYKRVSCRRKGGVRFTLRGQSNFNMVMISNV
Sbjct: 125 CDPPRAHFDMSSPAFLTIARQGNEGIVPVLYKRVSCRRKGGVRFTLRGQSNFNMVMISNV 184

Query: 181 GGSGDVKAAWVKGSRTRTWMPMHRNWGANWQANVDLRNQRMSFKVTLIDGRTLEFVNVVP 240
           GGSGD+KAAWVKGSRTRTWMPMHRNWGANWQANVDLRNQRMSFKVTLIDGRTL+FVNVVP
Sbjct: 185 GGSGDIKAAWVKGSRTRTWMPMHRNWGANWQANVDLRNQRMSFKVTLIDGRTLDFVNVVP 244

Query: 241 SSWRFGQTFSSMIQFS 256
           SSWRFGQTFSS++QFS
Sbjct: 245 SSWRFGQTFSSLVQFS 260

[Close]

BLAST of Cp4.1LG01g08550 vs. NCBI nr
Match: XP_023002729.1 (expansin-A12 [Cucurbita maxima])

HSP 1 Score: 532 bits (1370), Expect = 7.68e-191
Identity = 251/256 (98.05%), Postives = 254/256 (99.22%), Query Frame = 0


Query: 1   MVYGNGGFVWVLYALFFMVVGGSFVHGDGGAWLHAHATFYGADQNPTSLGGACGYDNTFH 60
           M+YGNGGFVWVLYALFFM+VGGSFVHGDGGAWL AHATFYGADQNPTSLGGACGYDNTFH
Sbjct: 4   MIYGNGGFVWVLYALFFMLVGGSFVHGDGGAWLDAHATFYGADQNPTSLGGACGYDNTFH 63

Query: 61  AGFGINTAAVSGALFRGGEACGACFLVICNYNVDPKWCLRRRAVAITATNFCPSNNNGGW 120
           AGFGINTAAVSGALFRGGEACGACFLVICNYNVDPKWCLRRRAVAITATNFCPSNNNGGW
Sbjct: 64  AGFGINTAAVSGALFRGGEACGACFLVICNYNVDPKWCLRRRAVAITATNFCPSNNNGGW 123

Query: 121 CDPPRAHFDMSSPAFLTIARQGNEGIVPVLYKRVSCRRKGGVRFTLRGQSNFNMVMISNV 180
           CDPPRAHFDMSSPAFLTIARQGNEGIVPVLYKRVSCRRKGGVRFTLRGQSNFNMVMISNV
Sbjct: 124 CDPPRAHFDMSSPAFLTIARQGNEGIVPVLYKRVSCRRKGGVRFTLRGQSNFNMVMISNV 183

Query: 181 GGSGDVKAAWVKGSRTRTWMPMHRNWGANWQANVDLRNQRMSFKVTLIDGRTLEFVNVVP 240
           GGSGDVKAAWVKGSRTRTWMPMHRNWGANWQANVDLRNQRMSFKVTLIDGRTLEFVNVVP
Sbjct: 184 GGSGDVKAAWVKGSRTRTWMPMHRNWGANWQANVDLRNQRMSFKVTLIDGRTLEFVNVVP 243

Query: 241 SSWRFGQTFSSMIQFS 256
           SSW FGQTFSSM+QFS
Sbjct: 244 SSWWFGQTFSSMVQFS 259

[Close]

BLAST of Cp4.1LG01g08550 vs. NCBI nr
Match: XP_022942774.1 (expansin-A12-like [Cucurbita moschata])

HSP 1 Score: 526 bits (1354), Expect = 2.19e-188
Identity = 248/256 (96.88%), Postives = 253/256 (98.83%), Query Frame = 0


Query: 1   MVYGNGGFVWVLYALFFMVVGGSFVHGDGGAWLHAHATFYGADQNPTSLGGACGYDNTFH 60
           M+YGNGGFVWVL+ALFFMVVGGSFVHGDGGAWL AHATFYGADQNPTSLGGACGYDNTFH
Sbjct: 5   MIYGNGGFVWVLHALFFMVVGGSFVHGDGGAWLDAHATFYGADQNPTSLGGACGYDNTFH 64

Query: 61  AGFGINTAAVSGALFRGGEACGACFLVICNYNVDPKWCLRRRAVAITATNFCPSNNNGGW 120
           AGFGINTAAVSGALFRGGEACGACFLVICNYNVDPKWCLRRRAVAITATNFCPSNNNGGW
Sbjct: 65  AGFGINTAAVSGALFRGGEACGACFLVICNYNVDPKWCLRRRAVAITATNFCPSNNNGGW 124

Query: 121 CDPPRAHFDMSSPAFLTIARQGNEGIVPVLYKRVSCRRKGGVRFTLRGQSNFNMVMISNV 180
           CDPPRAHFDMSSPAFLTIARQGNEGIVPVLYKRVSCRRKGGVRFTLRGQSNFNMVMISNV
Sbjct: 125 CDPPRAHFDMSSPAFLTIARQGNEGIVPVLYKRVSCRRKGGVRFTLRGQSNFNMVMISNV 184

Query: 181 GGSGDVKAAWVKGSRTRTWMPMHRNWGANWQANVDLRNQRMSFKVTLIDGRTLEFVNVVP 240
           GGSGD+KAAWVKGSRTRTWM MHRNWGANWQANVDLRNQ MSFKVTLIDGRTL+FVNVVP
Sbjct: 185 GGSGDIKAAWVKGSRTRTWMLMHRNWGANWQANVDLRNQIMSFKVTLIDGRTLDFVNVVP 244

Query: 241 SSWRFGQTFSSMIQFS 256
           SSWRFGQTFSSM+QFS
Sbjct: 245 SSWRFGQTFSSMVQFS 260

[Close]

BLAST of Cp4.1LG01g08550 vs. NCBI nr
Match: KAG7031371.1 (Expansin-A12, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 503 bits (1295), Expect = 1.00e-179
Identity = 235/239 (98.33%), Postives = 239/239 (100.00%), Query Frame = 0


Query: 18  MVVGGSFVHGDGGAWLHAHATFYGADQNPTSLGGACGYDNTFHAGFGINTAAVSGALFRG 77
           MVVGGSFVHGDGGAWLHAHATFYGADQNPTSLGGACGYDNTFHAGFGINTAAVSGALFRG
Sbjct: 1   MVVGGSFVHGDGGAWLHAHATFYGADQNPTSLGGACGYDNTFHAGFGINTAAVSGALFRG 60

Query: 78  GEACGACFLVICNYNVDPKWCLRRRAVAITATNFCPSNNNGGWCDPPRAHFDMSSPAFLT 137
           GEACGACFLVICNYNVDPKWCLRRRAVAITATNFCPSNNNGGWCDPPRAHFDMSSPAFLT
Sbjct: 61  GEACGACFLVICNYNVDPKWCLRRRAVAITATNFCPSNNNGGWCDPPRAHFDMSSPAFLT 120

Query: 138 IARQGNEGIVPVLYKRVSCRRKGGVRFTLRGQSNFNMVMISNVGGSGDVKAAWVKGSRTR 197
           IARQGNEGIVPVLYKRVSCRRKGGVRFTLRGQSNFNMVMISNVGGSGD+KAAWVKGSRTR
Sbjct: 121 IARQGNEGIVPVLYKRVSCRRKGGVRFTLRGQSNFNMVMISNVGGSGDIKAAWVKGSRTR 180

Query: 198 TWMPMHRNWGANWQANVDLRNQRMSFKVTLIDGRTLEFVNVVPSSWRFGQTFSSMIQFS 256
           TWMPMHRNWGANWQANVDLRNQRMSFKVTLIDGRTL+FVNVVPSSWRFGQTFSS++QFS
Sbjct: 181 TWMPMHRNWGANWQANVDLRNQRMSFKVTLIDGRTLDFVNVVPSSWRFGQTFSSLVQFS 239

[Close]

BLAST of Cp4.1LG01g08550 vs. ExPASy TrEMBL
Match: A0A6J1KRA2 (Expansin OS=Cucurbita maxima OX=3661 GN=LOC111496472 PE=3 SV=1)

HSP 1 Score: 532 bits (1370), Expect = 3.72e-191
Identity = 251/256 (98.05%), Postives = 254/256 (99.22%), Query Frame = 0


Query: 1   MVYGNGGFVWVLYALFFMVVGGSFVHGDGGAWLHAHATFYGADQNPTSLGGACGYDNTFH 60
           M+YGNGGFVWVLYALFFM+VGGSFVHGDGGAWL AHATFYGADQNPTSLGGACGYDNTFH
Sbjct: 4   MIYGNGGFVWVLYALFFMLVGGSFVHGDGGAWLDAHATFYGADQNPTSLGGACGYDNTFH 63

Query: 61  AGFGINTAAVSGALFRGGEACGACFLVICNYNVDPKWCLRRRAVAITATNFCPSNNNGGW 120
           AGFGINTAAVSGALFRGGEACGACFLVICNYNVDPKWCLRRRAVAITATNFCPSNNNGGW
Sbjct: 64  AGFGINTAAVSGALFRGGEACGACFLVICNYNVDPKWCLRRRAVAITATNFCPSNNNGGW 123

Query: 121 CDPPRAHFDMSSPAFLTIARQGNEGIVPVLYKRVSCRRKGGVRFTLRGQSNFNMVMISNV 180
           CDPPRAHFDMSSPAFLTIARQGNEGIVPVLYKRVSCRRKGGVRFTLRGQSNFNMVMISNV
Sbjct: 124 CDPPRAHFDMSSPAFLTIARQGNEGIVPVLYKRVSCRRKGGVRFTLRGQSNFNMVMISNV 183

Query: 181 GGSGDVKAAWVKGSRTRTWMPMHRNWGANWQANVDLRNQRMSFKVTLIDGRTLEFVNVVP 240
           GGSGDVKAAWVKGSRTRTWMPMHRNWGANWQANVDLRNQRMSFKVTLIDGRTLEFVNVVP
Sbjct: 184 GGSGDVKAAWVKGSRTRTWMPMHRNWGANWQANVDLRNQRMSFKVTLIDGRTLEFVNVVP 243

Query: 241 SSWRFGQTFSSMIQFS 256
           SSW FGQTFSSM+QFS
Sbjct: 244 SSWWFGQTFSSMVQFS 259

[Close]

BLAST of Cp4.1LG01g08550 vs. ExPASy TrEMBL
Match: A0A6J1FSB0 (Expansin OS=Cucurbita moschata OX=3662 GN=LOC111447709 PE=3 SV=1)

HSP 1 Score: 526 bits (1354), Expect = 1.06e-188
Identity = 248/256 (96.88%), Postives = 253/256 (98.83%), Query Frame = 0


Query: 1   MVYGNGGFVWVLYALFFMVVGGSFVHGDGGAWLHAHATFYGADQNPTSLGGACGYDNTFH 60
           M+YGNGGFVWVL+ALFFMVVGGSFVHGDGGAWL AHATFYGADQNPTSLGGACGYDNTFH
Sbjct: 5   MIYGNGGFVWVLHALFFMVVGGSFVHGDGGAWLDAHATFYGADQNPTSLGGACGYDNTFH 64

Query: 61  AGFGINTAAVSGALFRGGEACGACFLVICNYNVDPKWCLRRRAVAITATNFCPSNNNGGW 120
           AGFGINTAAVSGALFRGGEACGACFLVICNYNVDPKWCLRRRAVAITATNFCPSNNNGGW
Sbjct: 65  AGFGINTAAVSGALFRGGEACGACFLVICNYNVDPKWCLRRRAVAITATNFCPSNNNGGW 124

Query: 121 CDPPRAHFDMSSPAFLTIARQGNEGIVPVLYKRVSCRRKGGVRFTLRGQSNFNMVMISNV 180
           CDPPRAHFDMSSPAFLTIARQGNEGIVPVLYKRVSCRRKGGVRFTLRGQSNFNMVMISNV
Sbjct: 125 CDPPRAHFDMSSPAFLTIARQGNEGIVPVLYKRVSCRRKGGVRFTLRGQSNFNMVMISNV 184

Query: 181 GGSGDVKAAWVKGSRTRTWMPMHRNWGANWQANVDLRNQRMSFKVTLIDGRTLEFVNVVP 240
           GGSGD+KAAWVKGSRTRTWM MHRNWGANWQANVDLRNQ MSFKVTLIDGRTL+FVNVVP
Sbjct: 185 GGSGDIKAAWVKGSRTRTWMLMHRNWGANWQANVDLRNQIMSFKVTLIDGRTLDFVNVVP 244

Query: 241 SSWRFGQTFSSMIQFS 256
           SSWRFGQTFSSM+QFS
Sbjct: 245 SSWRFGQTFSSMVQFS 260

[Close]

BLAST of Cp4.1LG01g08550 vs. ExPASy TrEMBL
Match: A0A0A0L6M1 (Expansin OS=Cucumis sativus OX=3659 GN=Csa_3G104900 PE=3 SV=1)

HSP 1 Score: 468 bits (1205), Expect = 4.42e-166
Identity = 225/259 (86.87%), Postives = 236/259 (91.12%), Query Frame = 0


Query: 1   MVY-GNGGFVWVLYALFFMVVGGS--FVHGDGGAWLHAHATFYGADQNPTSLGGACGYDN 60
           M+Y  N GFVW +    FMV+G    FVHGD  +W  AHATFYGADQNPTSLGGACGYDN
Sbjct: 1   MIYENNNGFVWFI----FMVIGLGEFFVHGDN-SWFDAHATFYGADQNPTSLGGACGYDN 60

Query: 61  TFHAGFGINTAAVSGALFRGGEACGACFLVICNYNVDPKWCLRRRAVAITATNFCPSNNN 120
           TFHAGFGINTAAVSG LFR GEACGACFLVICNYN DPKWCLRRRAV +TATNFCPSNNN
Sbjct: 61  TFHAGFGINTAAVSGVLFRRGEACGACFLVICNYNADPKWCLRRRAVTVTATNFCPSNNN 120

Query: 121 GGWCDPPRAHFDMSSPAFLTIARQGNEGIVPVLYKRVSCRRKGGVRFTLRGQSNFNMVMI 180
           GGWCDPPR+HFDMSSPAFLTIARQGNEGIVPVLYKRVSC+RKGGVRFTLRGQSNFNMVMI
Sbjct: 121 GGWCDPPRSHFDMSSPAFLTIARQGNEGIVPVLYKRVSCKRKGGVRFTLRGQSNFNMVMI 180

Query: 181 SNVGGSGDVKAAWVKGSRTRTWMPMHRNWGANWQANVDLRNQRMSFKVTLIDGRTLEFVN 240
           SNVGGSGDVKAAWVKGS+ R W PMHRNWGANWQANVDLRNQRMSFK+TL+DGRTLEFVN
Sbjct: 181 SNVGGSGDVKAAWVKGSKMRMWTPMHRNWGANWQANVDLRNQRMSFKLTLLDGRTLEFVN 240

Query: 241 VVPSSWRFGQTFSSMIQFS 256
           VVPSSWRFGQTFSSM+QFS
Sbjct: 241 VVPSSWRFGQTFSSMVQFS 254

[Close]

BLAST of Cp4.1LG01g08550 vs. ExPASy TrEMBL
Match: A0A1S3BTH1 (Expansin OS=Cucumis melo OX=3656 GN=LOC103493334 PE=3 SV=1)

HSP 1 Score: 462 bits (1189), Expect = 1.26e-163
Identity = 223/260 (85.77%), Postives = 237/260 (91.15%), Query Frame = 0


Query: 1   MVYGNG--GFVWVLYALFFMVVG-GSF-VHGDGGAWLHAHATFYGADQNPTSLGGACGYD 60
           M+Y N   GFVW +    FMV+G G F VHGD  +W  AHATFYGADQNPTSLGGACGYD
Sbjct: 1   MIYENNSNGFVWFI----FMVIGLGKFLVHGDN-SWFDAHATFYGADQNPTSLGGACGYD 60

Query: 61  NTFHAGFGINTAAVSGALFRGGEACGACFLVICNYNVDPKWCLRRRAVAITATNFCPSNN 120
           NTFHAGFGINTAAVSG LFR GEACGACFLV+CNYN DPKWCLRRRAV +TATNFCPSNN
Sbjct: 61  NTFHAGFGINTAAVSGVLFRRGEACGACFLVMCNYNADPKWCLRRRAVTVTATNFCPSNN 120

Query: 121 NGGWCDPPRAHFDMSSPAFLTIARQGNEGIVPVLYKRVSCRRKGGVRFTLRGQSNFNMVM 180
           NGGWCDPPR+HFDMSSPAFLTIARQGNEGIVPVLYKRVSC+RKGGVRFTLRGQSNFNMVM
Sbjct: 121 NGGWCDPPRSHFDMSSPAFLTIARQGNEGIVPVLYKRVSCKRKGGVRFTLRGQSNFNMVM 180

Query: 181 ISNVGGSGDVKAAWVKGSRTRTWMPMHRNWGANWQANVDLRNQRMSFKVTLIDGRTLEFV 240
           ISNVGGSGDVKAAWVKGS+ RTW PMHRNWGANWQANVDLRNQRMSFK++L DGR+LEFV
Sbjct: 181 ISNVGGSGDVKAAWVKGSKMRTWTPMHRNWGANWQANVDLRNQRMSFKLSLHDGRSLEFV 240

Query: 241 NVVPSSWRFGQTFSSMIQFS 256
           NV+PSSWRFGQTFSSM+QFS
Sbjct: 241 NVIPSSWRFGQTFSSMLQFS 255

[Close]

BLAST of Cp4.1LG01g08550 vs. ExPASy TrEMBL
Match: A0A5D3BST0 (Expansin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold18G00140 PE=3 SV=1)

HSP 1 Score: 456 bits (1172), Expect = 2.65e-161
Identity = 213/239 (89.12%), Postives = 224/239 (93.72%), Query Frame = 0


Query: 18  MVVGGSFVHGDGGAWLHAHATFYGADQNPTSLGGACGYDNTFHAGFGINTAAVSGALFRG 77
           M VG   VHGD  +W  AHATFYGADQNPTSLGGACGYDNTFHAGFGINTAAVSG LFR 
Sbjct: 1   MKVGKFLVHGDN-SWFDAHATFYGADQNPTSLGGACGYDNTFHAGFGINTAAVSGVLFRR 60

Query: 78  GEACGACFLVICNYNVDPKWCLRRRAVAITATNFCPSNNNGGWCDPPRAHFDMSSPAFLT 137
           GEACGACFLV+CNYN DPKWCLRRRAV +TATNFCPSNNNGGWCDPPR+HFDMSSPAFLT
Sbjct: 61  GEACGACFLVMCNYNADPKWCLRRRAVTVTATNFCPSNNNGGWCDPPRSHFDMSSPAFLT 120

Query: 138 IARQGNEGIVPVLYKRVSCRRKGGVRFTLRGQSNFNMVMISNVGGSGDVKAAWVKGSRTR 197
           IARQGNEGIVPVLYKRVSC+RKGGVRFTLRGQSNFNMVMISNVGGSGDVKAAWVKGS+ R
Sbjct: 121 IARQGNEGIVPVLYKRVSCKRKGGVRFTLRGQSNFNMVMISNVGGSGDVKAAWVKGSKMR 180

Query: 198 TWMPMHRNWGANWQANVDLRNQRMSFKVTLIDGRTLEFVNVVPSSWRFGQTFSSMIQFS 256
           TW PMHRNWGANWQANVDLRNQRMSFK++L DGR+LEFVNV+PSSWRFGQTFSSM+QFS
Sbjct: 181 TWTPMHRNWGANWQANVDLRNQRMSFKLSLHDGRSLEFVNVIPSSWRFGQTFSSMLQFS 238

[Close]

BLAST of Cp4.1LG01g08550 vs. TAIR 10
Match: AT3G15370.1 (expansin 12 )

HSP 1 Score: 347.4 bits (890), Expect = 9.6e-96
Identity = 152/220 (69.09%), Postives = 182/220 (82.73%), Query Frame = 0


Query: 32  WLHAHATFYGADQNPTSLGGACGYDNTFHAGFGINTAAVSGALFRGGEACGACFLVICNY 91
           W+ AHAT+YG + +P SLGGACGYDN +HAGFG +TAA+SG LFR GE+CG C+ V C++
Sbjct: 27  WIRAHATYYGVNDSPASLGGACGYDNPYHAGFGAHTAALSGELFRSGESCGGCYQVRCDF 86

Query: 92  NVDPKWCLRRRAVAITATNFCPSNNNGGWCDPPRAHFDMSSPAFLTIARQGNEGIVPVLY 151
             DPKWCLR  AV +TATNFCP+NNN GWC+ PR HFDMSSPAF  IAR+GNEGIVPV Y
Sbjct: 87  PADPKWCLRGAAVTVTATNFCPTNNNNGWCNLPRHHFDMSSPAFFRIARRGNEGIVPVFY 146

Query: 152 KRVSCRRKGGVRFTLRGQSNFNMVMISNVGGSGDVKAAWVKGSRTRTWMPMHRNWGANWQ 211
           +RV C+R+GGVRFT+RGQ NFNMVMISNVGG G V++  V+GS+ +TW+ M RNWGANWQ
Sbjct: 147 RRVGCKRRGGVRFTMRGQGNFNMVMISNVGGGGSVRSVAVRGSKGKTWLQMTRNWGANWQ 206

Query: 212 ANVDLRNQRMSFKVTLIDGRTLEFVNVVPSSWRFGQTFSS 252
           ++ DLR QR+SFKVTL D +T  F+NVVPSSW FGQTFSS
Sbjct: 207 SSGDLRGQRLSFKVTLTDSKTQTFLNVVPSSWWFGQTFSS 246

[Close]

BLAST of Cp4.1LG01g08550 vs. TAIR 10
Match: AT4G01630.1 (expansin A17 )

HSP 1 Score: 280.0 bits (715), Expect = 1.9e-75
Identity = 126/250 (50.40%), Postives = 170/250 (68.00%), Query Frame = 0


Query: 11  VLYALFFMVVGGSFVHGDGGAWLHAHATFYGADQNPTSLGGACGYDNTFHAGFGINTAAV 70
           +L A+ F  +    +      WL AHATFYG      ++GGACGY N +  G+  NTAA+
Sbjct: 7   LLVAMIFSTMFFMKISSVSAGWLQAHATFYGGSDASGTMGGACGYGNLYTDGYKTNTAAL 66

Query: 71  SGALFRGGEACGACFLVICNYNVDPKWCLRRRAVAITATNFCPSN-----NNGGWCDPPR 130
           S ALF  G++CG C+ ++C+    P+WCL+ +++ ITATNFCP N     +NGGWC+PPR
Sbjct: 67  STALFNDGKSCGGCYQILCDATKVPQWCLKGKSITITATNFCPPNFAQASDNGGWCNPPR 126

Query: 131 AHFDMSSPAFLTIARQGNEGIVPVLYKRVSCRRKGGVRFTLRGQSNFNMVMISNVGGSGD 190
            HFDM+ PAFLTIA+    GIVP+LYK+V CRR GG+RFT+ G++ F +V+ISNV G G+
Sbjct: 127 PHFDMAQPAFLTIAKY-KAGIVPILYKKVGCRRSGGMRFTINGRNYFELVLISNVAGGGE 186

Query: 191 VKAAWVKGSRTRTWMPMHRNWGANWQANVDLRNQRMSFKVTLIDGRTLEFVNVVPSSWRF 250
           +   W+KGS++  W  M RNWGAN+Q+N  L  Q +SFKV L DG     +NVVPS+WRF
Sbjct: 187 ISKVWIKGSKSNKWETMSRNWGANYQSNTYLNGQSLSFKVQLSDGSIKAALNVVPSNWRF 246

Query: 251 GQTFSSMIQF 256
           GQ+F S + F
Sbjct: 247 GQSFKSNVNF 255

[Close]

BLAST of Cp4.1LG01g08550 vs. TAIR 10
Match: AT2G40610.1 (expansin A8 )

HSP 1 Score: 273.9 bits (699), Expect = 1.3e-73
Identity = 127/229 (55.46%), Postives = 163/229 (71.18%), Query Frame = 0


Query: 26  HGDGGAWLHAHATFYGADQNPTSLGGACGYDNTFHAGFGINTAAVSGALFRGGEACGACF 85
           HGD G W   HATFYG +    ++GGACGY N +  G+G NTAA+S ALF  G  CGAC+
Sbjct: 24  HGDDGGWQGGHATFYGGEDASGTMGGACGYGNLYGQGYGTNTAALSTALFNNGLTCGACY 83

Query: 86  LVICNYNVDPKWCLRRRAVAITATNFCP-----SNNNGGWCDPPRAHFDMSSPAFLTIAR 145
            + C  N DP+WCL    + +TATNFCP     SN+NGGWC+PP  HFD++ PAFL IA 
Sbjct: 84  EMKC--NDDPRWCL-GSTITVTATNFCPPNPGLSNDNGGWCNPPLQHFDLAEPAFLQIA- 143

Query: 146 QGNEGIVPVLYKRVSCRRKGGVRFTLRGQSNFNMVMISNVGGSGDVKAAWVKGSRTRTWM 205
           Q   GIVPV ++RV C +KGG+RFT+ G S FN+V+ISNVGG+GDV A  +KGS+T++W 
Sbjct: 144 QYRAGIVPVSFRRVPCMKKGGIRFTINGHSYFNLVLISNVGGAGDVHAVSIKGSKTQSWQ 203

Query: 206 PMHRNWGANWQANVDLRNQRMSFKVTLIDGRTLEFVNVVPSSWRFGQTF 250
            M RNWG NWQ+N  + +Q +SF+VT  DGRTL   +V PS+W+FGQT+
Sbjct: 204 AMSRNWGQNWQSNSYMNDQSLSFQVTTSDGRTLVSNDVAPSNWQFGQTY 248

[Close]

BLAST of Cp4.1LG01g08550 vs. TAIR 10
Match: AT1G26770.1 (expansin A10 )

HSP 1 Score: 265.4 bits (677), Expect = 4.8e-71
Identity = 131/252 (51.98%), Postives = 169/252 (67.06%), Query Frame = 0


Query: 4   GNGGFVWVLYALFFMVVGGSFVHGDGGAWLHAHATFYGADQNPTSLGGACGYDNTFHAGF 63
           G+ GF+     +  + V  S V G GG W++AHATFYG      ++GGACGY N +  G+
Sbjct: 2   GHLGFL----VMIMVGVMASSVSGYGGGWINAHATFYGGGDASGTMGGACGYGNLYSQGY 61

Query: 64  GINTAAVSGALFRGGEACGACFLVICNYNVDPKWCLRRRAVAITATNFCP-----SNNNG 123
           G +TAA+S ALF  G +CG+CF + C    D KWCL   ++ +TATNFCP     +NNNG
Sbjct: 62  GTSTAALSTALFNNGLSCGSCFEIRCEN--DGKWCL-PGSIVVTATNFCPPNNALANNNG 121

Query: 124 GWCDPPRAHFDMSSPAFLTIARQGNEGIVPVLYKRVSCRRKGGVRFTLRGQSNFNMVMIS 183
           GWC+PP  HFD++ P F  IA Q   GIVPV Y+RV CRR+GG+RFT+ G S FN+V+I+
Sbjct: 122 GWCNPPLEHFDLAQPVFQRIA-QYRAGIVPVSYRRVPCRRRGGIRFTINGHSYFNLVLIT 181

Query: 184 NVGGSGDVKAAWVKGSRTRTWMPMHRNWGANWQANVDLRNQRMSFKVTLIDGRTLEFVNV 243
           NVGG+GDV +A +KGSRT  W  M RNWG NWQ+N  L  Q +SFKVT  DGRT+   N 
Sbjct: 182 NVGGAGDVHSAAIKGSRT-VWQAMSRNWGQNWQSNSYLNGQALSFKVTTSDGRTVVSFNA 241

Query: 244 VPSSWRFGQTFS 251
            P+ W +GQTF+
Sbjct: 242 APAGWSYGQTFA 244

[Close]

BLAST of Cp4.1LG01g08550 vs. TAIR 10
Match: AT1G26770.2 (expansin A10 )

HSP 1 Score: 265.4 bits (677), Expect = 4.8e-71
Identity = 131/252 (51.98%), Postives = 169/252 (67.06%), Query Frame = 0


Query: 4   GNGGFVWVLYALFFMVVGGSFVHGDGGAWLHAHATFYGADQNPTSLGGACGYDNTFHAGF 63
           G+ GF+     +  + V  S V G GG W++AHATFYG      ++GGACGY N +  G+
Sbjct: 12  GHLGFL----VMIMVGVMASSVSGYGGGWINAHATFYGGGDASGTMGGACGYGNLYSQGY 71

Query: 64  GINTAAVSGALFRGGEACGACFLVICNYNVDPKWCLRRRAVAITATNFCP-----SNNNG 123
           G +TAA+S ALF  G +CG+CF + C    D KWCL   ++ +TATNFCP     +NNNG
Sbjct: 72  GTSTAALSTALFNNGLSCGSCFEIRCEN--DGKWCL-PGSIVVTATNFCPPNNALANNNG 131

Query: 124 GWCDPPRAHFDMSSPAFLTIARQGNEGIVPVLYKRVSCRRKGGVRFTLRGQSNFNMVMIS 183
           GWC+PP  HFD++ P F  IA Q   GIVPV Y+RV CRR+GG+RFT+ G S FN+V+I+
Sbjct: 132 GWCNPPLEHFDLAQPVFQRIA-QYRAGIVPVSYRRVPCRRRGGIRFTINGHSYFNLVLIT 191

Query: 184 NVGGSGDVKAAWVKGSRTRTWMPMHRNWGANWQANVDLRNQRMSFKVTLIDGRTLEFVNV 243
           NVGG+GDV +A +KGSRT  W  M RNWG NWQ+N  L  Q +SFKVT  DGRT+   N 
Sbjct: 192 NVGGAGDVHSAAIKGSRT-VWQAMSRNWGQNWQSNSYLNGQALSFKVTTSDGRTVVSFNA 251

Query: 244 VPSSWRFGQTFS 251
            P+ W +GQTF+
Sbjct: 252 APAGWSYGQTFA 254

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g08550 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LDJ3	1.3e-94	69.09	Expansin-A12 OS=Arabidopsis thaliana OX=3702 GN=EXPA12 PE=2 SV=1	[more]
Q9ZSI1	2.6e-74	50.40	Putative expansin-A17 OS=Arabidopsis thaliana OX=3702 GN=EXPA17 PE=2 SV=1	[more]
O22874	1.9e-72	55.46	Expansin-A8 OS=Arabidopsis thaliana OX=3702 GN=EXPA8 PE=2 SV=1	[more]
Q9LDR9	6.7e-70	51.98	Expansin-A10 OS=Arabidopsis thaliana OX=3702 GN=EXPA10 PE=2 SV=1	[more]
Q4PR50	5.7e-69	49.39	Expansin-A15 OS=Oryza sativa subsp. japonica OX=39947 GN=EXPA15 PE=2 SV=2	[more]

BLAST of Cp4.1LG01g08550 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023539200.1	3.52e-194	100.00	expansin-A12 [Cucurbita pepo subsp. pepo]	[more]
KAG6600731.1	3.95e-191	97.27	Expansin-A12, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023002729.1	7.68e-191	98.05	expansin-A12 [Cucurbita maxima]	[more]
XP_022942774.1	2.19e-188	96.88	expansin-A12-like [Cucurbita moschata]	[more]
KAG7031371.1	1.00e-179	98.33	Expansin-A12, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Cp4.1LG01g08550 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KRA2	3.72e-191	98.05	Expansin OS=Cucurbita maxima OX=3661 GN=LOC111496472 PE=3 SV=1	[more]
A0A6J1FSB0	1.06e-188	96.88	Expansin OS=Cucurbita moschata OX=3662 GN=LOC111447709 PE=3 SV=1	[more]
A0A0A0L6M1	4.42e-166	86.87	Expansin OS=Cucumis sativus OX=3659 GN=Csa_3G104900 PE=3 SV=1	[more]
A0A1S3BTH1	1.26e-163	85.77	Expansin OS=Cucumis melo OX=3656 GN=LOC103493334 PE=3 SV=1	[more]
A0A5D3BST0	2.65e-161	89.12	Expansin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold18G00140 PE=3 S...	[more]

BLAST of Cp4.1LG01g08550 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G15370.1	9.6e-96	69.09	expansin 12	[more]
AT4G01630.1	1.9e-75	50.40	expansin A17	[more]
AT2G40610.1	1.3e-73	55.46	expansin A8	[more]
AT1G26770.1	4.8e-71	51.98	expansin A10	[more]
AT1G26770.2	4.8e-71	51.98	expansin A10	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002963	Expansin	PRINTS	PR01226	EXPANSIN	coord: 91..102 score: 36.39 coord: 160..172 score: 57.95 coord: 172..193 score: 53.48 coord: 104..114 score: 67.88 coord: 208..229 score: 51.06 coord: 62..76 score: 62.22 coord: 118..135 score: 68.7 coord: 237..253 score: 55.29
IPR007118	Expansin/Lol pI	PRINTS	PR01225	EXPANSNFAMLY	coord: 31..46 score: 46.09 coord: 144..160 score: 52.65 coord: 71..89 score: 49.61 coord: 49..67 score: 52.37 coord: 237..251 score: 54.0 coord: 199..213 score: 61.5
IPR007112	Expansin/pollen allergen, DPBB domain	SMART	SM00837	dpbb_1	coord: 67..151 e-value: 3.6E-38 score: 142.8
IPR007112	Expansin/pollen allergen, DPBB domain	PROSITE	PS50842	EXPANSIN_EG45	coord: 50..161 score: 29.280092
IPR036749	Expansin, cellulose-binding-like domain superfamily	GENE3D	2.60.40.760		coord: 161..256 e-value: 2.8E-24 score: 86.8
IPR036749	Expansin, cellulose-binding-like domain superfamily	SUPERFAMILY	49590	PHL pollen allergen	coord: 158..251
IPR009009	RlpA-like protein, double-psi beta-barrel domain	PFAM	PF03330	DPBB_1	coord: 67..151 e-value: 2.2E-17 score: 63.1
IPR036908	RlpA-like domain superfamily	GENE3D	2.40.40.10		coord: 21..157 e-value: 7.9E-35 score: 121.9
IPR036908	RlpA-like domain superfamily	SUPERFAMILY	50685	Barwin-like endoglucanases	coord: 11..179
IPR007117	Expansin, cellulose-binding-like domain	PFAM	PF01357	Expansin_C	coord: 162..240 e-value: 3.6E-24 score: 84.6
IPR007117	Expansin, cellulose-binding-like domain	PROSITE	PS50843	EXPANSIN_CBD	coord: 171..251 score: 21.068068
None	No IPR available	PANTHER	PTHR31867	EXPANSIN-A15	coord: 12..256
None	No IPR available	PANTHER	PTHR31867:SF124	EXPANSIN-A12	coord: 12..256

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g08550.1	Cp4.1LG01g08550.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009664	plant-type cell wall organization
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0016021	integral component of membrane