Cp4.1LG01g08090 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACGACCCGGGAAGGCATTCACCACCATCCACACAACAGTACTGACTGGAGCCTTGAACCCATGGACGAAAATAAACTAAGCGATAATAATATGTACTTAAACCAGCCACAAAAGCGAGTTATCATCAACTCATCATTTGTGAAACGACATATCATCAAGACATCGGAGTCGTCAAAACGTTCGACCAGGTCGTGGTGGAAGAACCCGAAAATAAAGAGACGGCGGCGTGTCGCCAAGTACAGATTCTATACTGTTGAAGGGAAGGTAAAGAGTTCCATAAAGAAAGGAATCAAATGGTTGAAAACCAAGTGTAGCAGAATCATATTTGGGTTTTGA ATGACGACCCGGGAAGGCATTCACCACCATCCACACAACAGTACTGACTGGAGCCTTGAACCCATGGACGAAAATAAACTAAGCGATAATAATATGTACTTAAACCAGCCACAAAAGCGAGTTATCATCAACTCATCATTTGTGAAACGACATATCATCAAGACATCGGAGTCGTCAAAACGTTCGACCAGGTCGTGGTGGAAGAACCCGAAAATAAAGAGACGGCGGCGTGTCGCCAAGTACAGATTCTATACTGTTGAAGGGAAGGTAAAGAGTTCCATAAAGAAAGGAATCAAATGGTTGAAAACCAAGTGTAGCAGAATCATATTTGGGTTTTGA ATGACGACCCGGGAAGGCATTCACCACCATCCACACAACAGTACTGACTGGAGCCTTGAACCCATGGACGAAAATAAACTAAGCGATAATAATATGTACTTAAACCAGCCACAAAAGCGAGTTATCATCAACTCATCATTTGTGAAACGACATATCATCAAGACATCGGAGTCGTCAAAACGTTCGACCAGGTCGTGGTGGAAGAACCCGAAAATAAAGAGACGGCGGCGTGTCGCCAAGTACAGATTCTATACTGTTGAAGGGAAGGTAAAGAGTTCCATAAAGAAAGGAATCAAATGGTTGAAAACCAAGTGTAGCAGAATCATATTTGGGTTTTGA MTTREGIHHHPHNSTDWSLEPMDENKLSDNNMYLNQPQKRVIINSSFVKRHIIKTSESSKRSTRSWWKNPKIKRRRRVAKYRFYTVEGKVKSSIKKGIKWLKTKCSRIIFGF Homology
BLAST of Cp4.1LG01g08090 vs. NCBI nr
Match: KAG6600771.1 (hypothetical protein SDJN03_06004, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 223 bits (567), Expect = 3.46e-73 Identity = 110/112 (98.21%), Postives = 111/112 (99.11%), Query Frame = 0
BLAST of Cp4.1LG01g08090 vs. NCBI nr
Match: KAG7031408.1 (hypothetical protein SDJN02_05448, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 219 bits (559), Expect = 5.74e-72 Identity = 109/112 (97.32%), Postives = 110/112 (98.21%), Query Frame = 0
BLAST of Cp4.1LG01g08090 vs. NCBI nr
Match: KAA0033960.1 (DUF3511 domain protein [Cucumis melo var. makuwa] >TYK02584.1 DUF3511 domain protein [Cucumis melo var. makuwa]) HSP 1 Score: 133 bits (334), Expect = 9.77e-38 Identity = 69/108 (63.89%), Postives = 84/108 (77.78%), Query Frame = 0
BLAST of Cp4.1LG01g08090 vs. NCBI nr
Match: KGN56136.1 (hypothetical protein Csa_009524 [Cucumis sativus]) HSP 1 Score: 127 bits (320), Expect = 1.40e-35 Identity = 66/109 (60.55%), Postives = 84/109 (77.06%), Query Frame = 0
BLAST of Cp4.1LG01g08090 vs. NCBI nr
Match: KAG7017168.1 (hypothetical protein SDJN02_22280, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 113 bits (283), Expect = 6.13e-30 Identity = 56/109 (51.38%), Postives = 80/109 (73.39%), Query Frame = 0
BLAST of Cp4.1LG01g08090 vs. ExPASy TrEMBL
Match: A0A5D3BTT8 (DUF3511 domain protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold925G00370 PE=4 SV=1) HSP 1 Score: 133 bits (334), Expect = 4.73e-38 Identity = 69/108 (63.89%), Postives = 84/108 (77.78%), Query Frame = 0
BLAST of Cp4.1LG01g08090 vs. ExPASy TrEMBL
Match: A0A0A0L7N5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G077700 PE=4 SV=1) HSP 1 Score: 127 bits (320), Expect = 6.79e-36 Identity = 66/109 (60.55%), Postives = 84/109 (77.06%), Query Frame = 0
BLAST of Cp4.1LG01g08090 vs. ExPASy TrEMBL
Match: A0A6J1DCB3 (uncharacterized protein LOC111019023 OS=Momordica charantia OX=3673 GN=LOC111019023 PE=4 SV=1) HSP 1 Score: 112 bits (281), Expect = 5.97e-30 Identity = 65/110 (59.09%), Postives = 79/110 (71.82%), Query Frame = 0
BLAST of Cp4.1LG01g08090 vs. ExPASy TrEMBL
Match: A0A5D3BBI7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1159G00320 PE=4 SV=1) HSP 1 Score: 107 bits (268), Expect = 5.98e-28 Identity = 62/112 (55.36%), Postives = 80/112 (71.43%), Query Frame = 0
BLAST of Cp4.1LG01g08090 vs. ExPASy TrEMBL
Match: A0A0A0LL30 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G123580 PE=4 SV=1) HSP 1 Score: 95.5 bits (236), Expect = 1.15e-22 Identity = 59/110 (53.64%), Postives = 76/110 (69.09%), Query Frame = 0
BLAST of Cp4.1LG01g08090 vs. TAIR 10
Match: AT3G05725.1 (Protein of unknown function (DUF3511) ) HSP 1 Score: 67.4 bits (163), Expect = 8.4e-12 Identity = 30/61 (49.18%), Postives = 45/61 (73.77%), Query Frame = 0
BLAST of Cp4.1LG01g08090 vs. TAIR 10
Match: AT2G47480.1 (Protein of unknown function (DUF3511) ) HSP 1 Score: 55.5 bits (132), Expect = 3.3e-08 Identity = 22/42 (52.38%), Postives = 35/42 (83.33%), Query Frame = 0
BLAST of Cp4.1LG01g08090 vs. TAIR 10
Match: AT2G19460.1 (Protein of unknown function (DUF3511) ) HSP 1 Score: 53.1 bits (126), Expect = 1.6e-07 Identity = 23/49 (46.94%), Postives = 37/49 (75.51%), Query Frame = 0
BLAST of Cp4.1LG01g08090 vs. TAIR 10
Match: AT3G62640.1 (Protein of unknown function (DUF3511) ) HSP 1 Score: 52.0 bits (123), Expect = 3.6e-07 Identity = 26/58 (44.83%), Postives = 40/58 (68.97%), Query Frame = 0
BLAST of Cp4.1LG01g08090 vs. TAIR 10
Match: AT5G11970.1 (Protein of unknown function (DUF3511) ) HSP 1 Score: 49.7 bits (117), Expect = 1.8e-06 Identity = 24/61 (39.34%), Postives = 43/61 (70.49%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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