Cp4.1LG01g08090 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG01g08090
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionProtein of unknown function (DUF3511)
LocationCp4.1LG01: 5085591 .. 5085929 (-)
RNA-Seq ExpressionCp4.1LG01g08090
SyntenyCp4.1LG01g08090
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACGACCCGGGAAGGCATTCACCACCATCCACACAACAGTACTGACTGGAGCCTTGAACCCATGGACGAAAATAAACTAAGCGATAATAATATGTACTTAAACCAGCCACAAAAGCGAGTTATCATCAACTCATCATTTGTGAAACGACATATCATCAAGACATCGGAGTCGTCAAAACGTTCGACCAGGTCGTGGTGGAAGAACCCGAAAATAAAGAGACGGCGGCGTGTCGCCAAGTACAGATTCTATACTGTTGAAGGGAAGGTAAAGAGTTCCATAAAGAAAGGAATCAAATGGTTGAAAACCAAGTGTAGCAGAATCATATTTGGGTTTTGA

mRNA sequence

ATGACGACCCGGGAAGGCATTCACCACCATCCACACAACAGTACTGACTGGAGCCTTGAACCCATGGACGAAAATAAACTAAGCGATAATAATATGTACTTAAACCAGCCACAAAAGCGAGTTATCATCAACTCATCATTTGTGAAACGACATATCATCAAGACATCGGAGTCGTCAAAACGTTCGACCAGGTCGTGGTGGAAGAACCCGAAAATAAAGAGACGGCGGCGTGTCGCCAAGTACAGATTCTATACTGTTGAAGGGAAGGTAAAGAGTTCCATAAAGAAAGGAATCAAATGGTTGAAAACCAAGTGTAGCAGAATCATATTTGGGTTTTGA

Coding sequence (CDS)

ATGACGACCCGGGAAGGCATTCACCACCATCCACACAACAGTACTGACTGGAGCCTTGAACCCATGGACGAAAATAAACTAAGCGATAATAATATGTACTTAAACCAGCCACAAAAGCGAGTTATCATCAACTCATCATTTGTGAAACGACATATCATCAAGACATCGGAGTCGTCAAAACGTTCGACCAGGTCGTGGTGGAAGAACCCGAAAATAAAGAGACGGCGGCGTGTCGCCAAGTACAGATTCTATACTGTTGAAGGGAAGGTAAAGAGTTCCATAAAGAAAGGAATCAAATGGTTGAAAACCAAGTGTAGCAGAATCATATTTGGGTTTTGA

Protein sequence

MTTREGIHHHPHNSTDWSLEPMDENKLSDNNMYLNQPQKRVIINSSFVKRHIIKTSESSKRSTRSWWKNPKIKRRRRVAKYRFYTVEGKVKSSIKKGIKWLKTKCSRIIFGF
Homology
BLAST of Cp4.1LG01g08090 vs. NCBI nr
Match: KAG6600771.1 (hypothetical protein SDJN03_06004, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 223 bits (567), Expect = 3.46e-73
Identity = 110/112 (98.21%), Postives = 111/112 (99.11%), Query Frame = 0

Query: 1   MTTREGIHHHPHNSTDWSLEPMDENKLSDNNMYLNQPQKRVIINSSFVKRHIIKTSESSK 60
           MTT EGIHHHPHNSTDWSLEPMDENKLSDNNMYLNQPQKRVII+SSFVKRHIIKTSESSK
Sbjct: 1   MTTEEGIHHHPHNSTDWSLEPMDENKLSDNNMYLNQPQKRVIISSSFVKRHIIKTSESSK 60

Query: 61  RSTRSWWKNPKIKRRRRVAKYRFYTVEGKVKSSIKKGIKWLKTKCSRIIFGF 112
           RSTRSWWKNPKIKRRRRVAKYRFYTVEGKVKSSIKKGIKWLKTKCSRIIFGF
Sbjct: 61  RSTRSWWKNPKIKRRRRVAKYRFYTVEGKVKSSIKKGIKWLKTKCSRIIFGF 112

BLAST of Cp4.1LG01g08090 vs. NCBI nr
Match: KAG7031408.1 (hypothetical protein SDJN02_05448, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 219 bits (559), Expect = 5.74e-72
Identity = 109/112 (97.32%), Postives = 110/112 (98.21%), Query Frame = 0

Query: 1   MTTREGIHHHPHNSTDWSLEPMDENKLSDNNMYLNQPQKRVIINSSFVKRHIIKTSESSK 60
           MTT EGIHHHPHNSTDWSLEPMDENKLSDNNMYLNQPQKRVII+SSFVKR IIKTSESSK
Sbjct: 1   MTTEEGIHHHPHNSTDWSLEPMDENKLSDNNMYLNQPQKRVIISSSFVKRQIIKTSESSK 60

Query: 61  RSTRSWWKNPKIKRRRRVAKYRFYTVEGKVKSSIKKGIKWLKTKCSRIIFGF 112
           RSTRSWWKNPKIKRRRRVAKYRFYTVEGKVKSSIKKGIKWLKTKCSRIIFGF
Sbjct: 61  RSTRSWWKNPKIKRRRRVAKYRFYTVEGKVKSSIKKGIKWLKTKCSRIIFGF 112

BLAST of Cp4.1LG01g08090 vs. NCBI nr
Match: KAA0033960.1 (DUF3511 domain protein [Cucumis melo var. makuwa] >TYK02584.1 DUF3511 domain protein [Cucumis melo var. makuwa])

HSP 1 Score: 133 bits (334), Expect = 9.77e-38
Identity = 69/108 (63.89%), Postives = 84/108 (77.78%), Query Frame = 0

Query: 5   EGIHHHPHNSTDWSLEPMDENKLSDNNMYLNQPQKRVIINSSFVKRHIIKTSESSKRSTR 64
           EG+HHH  N    SLE MD  KLS+N MYLNQ Q+R +++ SFVKR++ KT E SK   +
Sbjct: 2   EGLHHHQ-NKGGRSLEVMDVRKLSENKMYLNQSQRRTVVDPSFVKRYVTKTWEPSKMK-K 61

Query: 65  SWWKNPKIKRRRRVAKYRFYTVEGKVKSSIKKGIKWLKTKCSRIIFGF 112
           SWWK P++KRR+RVAKY+ Y VEGKVKSSIKKG +W+KTKCSRII GF
Sbjct: 62  SWWKKPEMKRRQRVAKYKLYAVEGKVKSSIKKGFRWIKTKCSRIISGF 107

BLAST of Cp4.1LG01g08090 vs. NCBI nr
Match: KGN56136.1 (hypothetical protein Csa_009524 [Cucumis sativus])

HSP 1 Score: 127 bits (320), Expect = 1.40e-35
Identity = 66/109 (60.55%), Postives = 84/109 (77.06%), Query Frame = 0

Query: 5   EGIHHHPHNSTDWSLEPMDENKLSDNNMYLNQPQKRVIINSSFVKRHIIKTSESSKRSTR 64
           EG+HHHP N    SLE +D  KLS N +YLNQ Q+R +++ SFVK+++ KTSE SK   +
Sbjct: 2   EGLHHHP-NKGGRSLEVIDVRKLSVNKVYLNQSQRRTVVDPSFVKQYVTKTSEPSKSCMK 61

Query: 65  S-WWKNPKIKRRRRVAKYRFYTVEGKVKSSIKKGIKWLKTKCSRIIFGF 112
             WWK P+++RR+RVAKY+ Y VEGKVK SIKKGI+W+KTKCSRII GF
Sbjct: 62  KPWWKKPEMRRRQRVAKYKLYGVEGKVKRSIKKGIRWIKTKCSRIISGF 109

BLAST of Cp4.1LG01g08090 vs. NCBI nr
Match: KAG7017168.1 (hypothetical protein SDJN02_22280, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 113 bits (283), Expect = 6.13e-30
Identity = 56/109 (51.38%), Postives = 80/109 (73.39%), Query Frame = 0

Query: 5   EGIHHHPHNSTDWSLEPMDENKLSDNNMYLNQPQKRVIINSSFVKRHIIKTSESSKR-ST 64
           EG+H  P      SLE +D  KLS+N ++L+Q ++   ++ S VK  ++KT E S+  S 
Sbjct: 2   EGVHRRPSKGGGRSLEVIDVRKLSENQVHLSQSRRPAAMDPSAVKPRVVKTGEGSRGGSG 61

Query: 65  RSWWKNPKIKRRRRVAKYRFYTVEGKVKSSIKKGIKWLKTKCSRIIFGF 112
            SWWKNP++KR+RRVAKY+ YTVEG+VK SIKKG++W K++CSRI++GF
Sbjct: 62  NSWWKNPEMKRQRRVAKYKLYTVEGRVKDSIKKGMRWFKSRCSRIVYGF 110

BLAST of Cp4.1LG01g08090 vs. ExPASy TrEMBL
Match: A0A5D3BTT8 (DUF3511 domain protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold925G00370 PE=4 SV=1)

HSP 1 Score: 133 bits (334), Expect = 4.73e-38
Identity = 69/108 (63.89%), Postives = 84/108 (77.78%), Query Frame = 0

Query: 5   EGIHHHPHNSTDWSLEPMDENKLSDNNMYLNQPQKRVIINSSFVKRHIIKTSESSKRSTR 64
           EG+HHH  N    SLE MD  KLS+N MYLNQ Q+R +++ SFVKR++ KT E SK   +
Sbjct: 2   EGLHHHQ-NKGGRSLEVMDVRKLSENKMYLNQSQRRTVVDPSFVKRYVTKTWEPSKMK-K 61

Query: 65  SWWKNPKIKRRRRVAKYRFYTVEGKVKSSIKKGIKWLKTKCSRIIFGF 112
           SWWK P++KRR+RVAKY+ Y VEGKVKSSIKKG +W+KTKCSRII GF
Sbjct: 62  SWWKKPEMKRRQRVAKYKLYAVEGKVKSSIKKGFRWIKTKCSRIISGF 107

BLAST of Cp4.1LG01g08090 vs. ExPASy TrEMBL
Match: A0A0A0L7N5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G077700 PE=4 SV=1)

HSP 1 Score: 127 bits (320), Expect = 6.79e-36
Identity = 66/109 (60.55%), Postives = 84/109 (77.06%), Query Frame = 0

Query: 5   EGIHHHPHNSTDWSLEPMDENKLSDNNMYLNQPQKRVIINSSFVKRHIIKTSESSKRSTR 64
           EG+HHHP N    SLE +D  KLS N +YLNQ Q+R +++ SFVK+++ KTSE SK   +
Sbjct: 2   EGLHHHP-NKGGRSLEVIDVRKLSVNKVYLNQSQRRTVVDPSFVKQYVTKTSEPSKSCMK 61

Query: 65  S-WWKNPKIKRRRRVAKYRFYTVEGKVKSSIKKGIKWLKTKCSRIIFGF 112
             WWK P+++RR+RVAKY+ Y VEGKVK SIKKGI+W+KTKCSRII GF
Sbjct: 62  KPWWKKPEMRRRQRVAKYKLYGVEGKVKRSIKKGIRWIKTKCSRIISGF 109

BLAST of Cp4.1LG01g08090 vs. ExPASy TrEMBL
Match: A0A6J1DCB3 (uncharacterized protein LOC111019023 OS=Momordica charantia OX=3673 GN=LOC111019023 PE=4 SV=1)

HSP 1 Score: 112 bits (281), Expect = 5.97e-30
Identity = 65/110 (59.09%), Postives = 79/110 (71.82%), Query Frame = 0

Query: 5   EGIHHHPHNSTDWSLEPMDENKLSDNNMYLNQPQKRVIINSS-FVKRHIIKT-SESSKRS 64
           EGIH  P      SLE +D   LS+N + L+Q + R  ++ S   KR  IK  SESSK S
Sbjct: 2   EGIHRRPKKGGR-SLEIIDVRNLSENKLSLSQSRSRAAVDPSPSTKRQAIKKPSESSKSS 61

Query: 65  TRSWWKNPKIKRRRRVAKYRFYTVEGKVKSSIKKGIKWLKTKCSRIIFGF 112
            +SWWKNP++KRRRRVAKY+ YTVEGKVK+SIKKGIKW KT+CSRI+ GF
Sbjct: 62  VKSWWKNPEMKRRRRVAKYKLYTVEGKVKNSIKKGIKWFKTRCSRIMSGF 110

BLAST of Cp4.1LG01g08090 vs. ExPASy TrEMBL
Match: A0A5D3BBI7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1159G00320 PE=4 SV=1)

HSP 1 Score: 107 bits (268), Expect = 5.98e-28
Identity = 62/112 (55.36%), Postives = 80/112 (71.43%), Query Frame = 0

Query: 3   TREGIHHHPHNSTDWSLEPMDENKLSDNNMYLNQPQKRVIINSSFVKRHIIKT-SESSKR 62
           T E +H  P N  D +L+ +D  KLS+N M+LNQ ++   I+ S +K   IKT SESSK 
Sbjct: 2   TMERVHRRP-NKGDRNLKIIDVRKLSENKMHLNQSRRHSTIDPSSMKPRAIKTTSESSKA 61

Query: 63  ST-RSWWKNPKIKRRRRVAKYRFYTVEGKVKSSIKKGIKWLKTKCSRIIFGF 112
           ST + WWKN ++KRRRRVAKY+ YTVEG+VK SI+KGI W K +C+RII GF
Sbjct: 62  STVKLWWKNSEMKRRRRVAKYKLYTVEGRVKESIRKGINWFKCRCTRIISGF 112

BLAST of Cp4.1LG01g08090 vs. ExPASy TrEMBL
Match: A0A0A0LL30 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G123580 PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 1.15e-22
Identity = 59/110 (53.64%), Postives = 76/110 (69.09%), Query Frame = 0

Query: 5   EGIHHHPHNSTDWSLEPMDENKLSDNNMYLNQPQKRVIINSSFVKRHIIKT-SESSKRST 64
           EG+H  P N  D +L  +D  KLS+N ++LNQ  ++  +N S VK   +KT SESSK S 
Sbjct: 40  EGVHRRP-NKGDRNLRIIDVRKLSENKIHLNQSGRQSTMNPSSVKPRGMKTASESSKTSG 99

Query: 65  -RSWWKNPKIKRRRRVAKYRFYTVEGKVKSSIKKGIKWLKTKCSRIIFGF 112
            +SW K  ++KRRRRVAKY+ YTVEGKVK SI+KGI W K K +RI+ GF
Sbjct: 100 GKSWGKKLEVKRRRRVAKYKLYTVEGKVKDSIRKGINWFKCKYTRIMSGF 148

BLAST of Cp4.1LG01g08090 vs. TAIR 10
Match: AT3G05725.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 67.4 bits (163), Expect = 8.4e-12
Identity = 30/61 (49.18%), Postives = 45/61 (73.77%), Query Frame = 0

Query: 53  IKTSESSKRST--RSWWKNPKIKRRRRVAKYRFYTVEGKVKSSIKKGIKWLKTKCSRIIF 112
           ++   SS  ST  + WW +P+IKR+RRVAKY+ Y+ EGK+K +++K  KW+K +CS+II 
Sbjct: 63  VRPRRSSSHSTLFKGWWNDPEIKRKRRVAKYKLYSAEGKMKITLRKSYKWIKIQCSKIIH 122

BLAST of Cp4.1LG01g08090 vs. TAIR 10
Match: AT2G47480.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 55.5 bits (132), Expect = 3.3e-08
Identity = 22/42 (52.38%), Postives = 35/42 (83.33%), Query Frame = 0

Query: 71  KIKRRRRVAKYRFYTVEGKVKSSIKKGIKWLKTKCSRIIFGF 113
           ++KR++R+A+Y+ YTVEGKVKS++K G +W+K KC +I+  F
Sbjct: 69  EMKRKKRIARYKAYTVEGKVKSTLKNGFRWIKNKCCQIVHRF 110

BLAST of Cp4.1LG01g08090 vs. TAIR 10
Match: AT2G19460.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 53.1 bits (126), Expect = 1.6e-07
Identity = 23/49 (46.94%), Postives = 37/49 (75.51%), Query Frame = 0

Query: 62  STRSW-WKNPKIKRRRRVAKYRFYTVEGKVKSSIKKGIKWLKTKCSRII 110
           S+ SW + +P ++R++RV  YR YTVEGK+K S +K  KW+K KC++++
Sbjct: 67  SSSSWGFVDPDLQRKKRVVSYRAYTVEGKLKGSFRKSFKWIKDKCNKLL 115

BLAST of Cp4.1LG01g08090 vs. TAIR 10
Match: AT3G62640.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 52.0 bits (123), Expect = 3.6e-07
Identity = 26/58 (44.83%), Postives = 40/58 (68.97%), Query Frame = 0

Query: 56  SESSKRSTRSWWK--NPKIKRRRRVAKYRFYTVEGKVKSSIKKGIKWLKTKCSRIIFG 112
           S S  R+T + W+  + + KR++R+A Y+ Y +EGKVKS++KKG  W+K + S II G
Sbjct: 53  STSKTRTTATPWRLIDAETKRKKRIATYKTYALEGKVKSTVKKGFHWIKDRYSHIIHG 110

BLAST of Cp4.1LG01g08090 vs. TAIR 10
Match: AT5G11970.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 49.7 bits (117), Expect = 1.8e-06
Identity = 24/61 (39.34%), Postives = 43/61 (70.49%), Query Frame = 0

Query: 53  IKTSESSKRSTRSWW-KNPKIKRRRRVAKYRFYTVEGKVKSSIKKGIKWLKTKCSRIIFG 112
           +K  +S  RS +SW   +P+++R++RVA Y+ Y VEGKVK S +   +WLK + +++++G
Sbjct: 45  VKKEKSIARS-KSWGITDPELQRKKRVASYKMYGVEGKVKGSFRNSFRWLKQRYTQVVYG 104

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG6600771.13.46e-7398.21hypothetical protein SDJN03_06004, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7031408.15.74e-7297.32hypothetical protein SDJN02_05448, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAA0033960.19.77e-3863.89DUF3511 domain protein [Cucumis melo var. makuwa] >TYK02584.1 DUF3511 domain pro... [more]
KGN56136.11.40e-3560.55hypothetical protein Csa_009524 [Cucumis sativus][more]
KAG7017168.16.13e-3051.38hypothetical protein SDJN02_22280, partial [Cucurbita argyrosperma subsp. argyro... [more]
Match NameE-valueIdentityDescription
A0A5D3BTT84.73e-3863.89DUF3511 domain protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold9... [more]
A0A0A0L7N56.79e-3660.55Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G077700 PE=4 SV=1[more]
A0A6J1DCB35.97e-3059.09uncharacterized protein LOC111019023 OS=Momordica charantia OX=3673 GN=LOC111019... [more]
A0A5D3BBI75.98e-2855.36Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0LL301.15e-2253.64Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G123580 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT3G05725.18.4e-1249.18Protein of unknown function (DUF3511) [more]
AT2G47480.13.3e-0852.38Protein of unknown function (DUF3511) [more]
AT2G19460.11.6e-0746.94Protein of unknown function (DUF3511) [more]
AT3G62640.13.6e-0744.83Protein of unknown function (DUF3511) [more]
AT5G11970.11.8e-0639.34Protein of unknown function (DUF3511) [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021899Protein of unknown function DUF3511PFAMPF12023DUF3511coord: 67..110
e-value: 2.2E-20
score: 72.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21
NoneNo IPR availablePANTHERPTHR33193:SF13DOMAIN PROTEIN, PUTATIVE (DUF3511)-RELATEDcoord: 16..111
NoneNo IPR availablePANTHERPTHR33193DOMAIN PROTEIN, PUTATIVE (DUF3511)-RELATEDcoord: 16..111

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g08090.1Cp4.1LG01g08090.1mRNA