Cp4.1LG01g07890 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG01g07890
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	transcription factor bHLH111
Location	Cp4.1LG01: 5206489 .. 5208772 (-)
RNA-Seq Expression	Cp4.1LG01g07890
Synteny	Cp4.1LG01g07890

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CACACCCCAAATTCACAACAACAAATCGCACCTCCAACCACCGATCATGGCGGACGACTGCACCGACACCTCCGTAGCCACCTCTTCCACTCCACCCAACTGGTGGGATACCCACAGTCACCACCATCATTATAACTCCAACTCCTCTTGCGACGACGACGTTTCAATCTCCACCTCCTCCTTCACCAACGCTTCCAATCACTCCGCTCTCACCCTCGACTGCTCCTCCGCCCAGCTTCTTCCCCACCACGCTTCCGATCATCATCTCTGGACCCAAGTTTTATTGTAATTTCCTTTTTTTTTTTTTTAAATTTAATTATCTAATAATAATAATATATATTGGAATTAGTAGTCATAATATTTATTTAACCTTGACAGGAACATTGGAAACGGCGTGGAAGACATACAACCAAATTTCCTGGAACCCATTGCATGTAGCGATTACCTTAAAAAAATGGACACAAACACCAACTGGGACGACACTTTTCAAACCTTCAACAACAATAACGGACTTCTCACAACCCTAGAAAACGAGCGGTTGTTGAAGCTTTCCAATCTCGTCAACACTTGGTCCATAGCCCTACCCAGCCCTGACGCCCATCTCCGCCATCTCATGGACCAGGAACCCCACCCTCTCCGACCCACCACCCTCCTCGACCCAGACGCCGCCCTCGACCCATGTGCCTCCGCCTTCTTTAGGCGCTCGCTTCATACTCCGATGCCCGCCAAGCCCTTCTATGATAACCACACCGCCACTACCCGTAATTATGGTGATTATATCTCCTTTAATCCACGATTTGCTAAGCCACTTCTCGGTGTTAATCCTTCCATTAAGTCCTTCAATTTGTCACCTCAAACTAAGAAGCAGATTCAACAAATTTCTTCGCCAGTAAGCAAATTAATCGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNCATAATAAAATTAAACTTCATAATTAAAAGTGCTTATAAACAACAAGGAATTGAATTTTATATTGTTCATGAATTGAAATGAAAATCGTTAATTTAATTTTAATTTTAATTTTAATTTTTGTAAAATGGGTTTGAATTTATTGAATGACATTGCAGACAAGAGGTAGTGGGCGAGGAAGTGGAGTTTTGAACGAAGGGAAGAAGAAAAGATCTGAAGAATCTTCTGAAACTGTCACCAAAAAGGCTAAACAAGATAACTCAACAACACCTGCTTCTACTAAGGTTCGGTTTCGGGTTTCGGGTTTCGGGTTTCCAGTTTCGAGTTTCAATTTGATCTCTATAGCGTTTTTGTAATATTTTAAAGGGTTTATGATACATTGAACAGATTCAGCAACCAAAGGTCAAAATTGGGGATAGAATCACGACCCTTCAACAAATTGTGTCACCATTTGGAAAGGTGAATTTAGAACTTGAAAAGAAGGAAACATTTCATTTTCCATTTTATTTATTTATTTATTTATTATTATTATTATTCCTTCTCAGACTGATACCGCGTCGGTTCTAAACGAAACCATTGGATACATTAAATTCCTACAAGAACAAGTTCAGGTTTGTTTCATATAATCTTCTCTTTAATTATCCAATATGGGATTCCAACAATATGGGATTCCAACAATCTGGGATTCCAACGCATCTTCCTAGTACATATAATTTGTTTGTGTTTATAAATTTGTTTTTGTTGTTCTGTATTTCAGCTGCTGACGAATCCTTACCTGAAGACGAATTCGTATAAGGTATAAAGAATTGAATATGAATATGAATAGGAATAGAAGTAAAGTTGATATGGGGTTATGTATGTTTAGGATGCATGGCAAAGCTTGGAGAGGAAGGAATCAAAAGGGGAAGGGAAAATGGAGCTAAGGAGCAGAGGGCTGTGTTTAGTTCCAATTTCATGCACGCCACAAGTGTATAGAGAGAACAGTGGATCCGACTATTGGACGCCTTATCGAGGGTGTTTCTATAGATAGATATATAGATAGATATCGACTTTTATACCGACAGATACTCATTTCTATTTCTAAATTTCAATAACAAACTTCAAATCTTCAAACAATGGAGGGCTCAACTTAGTGCACTATGCCATAATATTTGACTCACTCAAACGGAAGTTCAAGGAGTGGAAGCTTCCAGGGTATATATGAATCAATTACATATGTGGTTTGTTGCATTATTCCAGCTAATTTCTTTAGAGACTAAGTCTAATATCCTCGTATTGTAGCTTGTTTTATGATGTAACGATACTGACCCGACCCAACTCAATCTGGGTGTTAAG

mRNA sequence

CACACCCCAAATTCACAACAACAAATCGCACCTCCAACCACCGATCATGGCGGACGACTGCACCGACACCTCCGTAGCCACCTCTTCCACTCCACCCAACTGGTGGGATACCCACAGTCACCACCATCATTATAACTCCAACTCCTCTTGCGACGACGACGTTTCAATCTCCACCTCCTCCTTCACCAACGCTTCCAATCACTCCGCTCTCACCCTCGACTGCTCCTCCGCCCAGCTTCTTCCCCACCACGCTTCCGATCATCATCTCTGGACCCAAGTTTTATTGAACATTGGAAACGGCGTGGAAGACATACAACCAAATTTCCTGGAACCCATTGCATGTAGCGATTACCTTAAAAAAATGGACACAAACACCAACTGGGACGACACTTTTCAAACCTTCAACAACAATAACGGACTTCTCACAACCCTAGAAAACGAGCGGTTGTTGAAGCTTTCCAATCTCGTCAACACTTGGTCCATAGCCCTACCCAGCCCTGACGCCCATCTCCGCCATCTCATGGACCAGGAACCCCACCCTCTCCGACCCACCACCCTCCTCGACCCAGACGCCGCCCTCGACCCATGTGCCTCCGCCTTCTTTAGGCGCTCGCTTCATACTCCGATGCCCGCCAAGCCCTTCTATGATAACCACACCGCCACTACCCGTAATTATGGTGATTATATCTCCTTTAATCCACGATTTGCTAAGCCACTTCTCGGTGTTAATCCTTCCATTAAGTCCTTCAATTTGTCACCTCAAACTAAGAAGCAGATTCAACAAATTTCTTCGCCAACAAGAGGTAGTGGGCGAGGAAGTGGAGTTTTGAACGAAGGGAAGAAGAAAAGATCTGAAGAATCTTCTGAAACTGTCACCAAAAAGGCTAAACAAGATAACTCAACAACACCTGCTTCTACTAAGATTCAGCAACCAAAGGTCAAAATTGGGGATAGAATCACGACCCTTCAACAAATTGTGTCACCATTTGGAAAGACTGATACCGCGTCGGTTCTAAACGAAACCATTGGATACATTAAATTCCTACAAGAACAAGTTCAGCTGCTGACGAATCCTTACCTGAAGACGAATTCGTATAAGGATGCATGGCAAAGCTTGGAGAGGAAGGAATCAAAAGGGGAAGGGAAAATGGAGCTAAGGAGCAGAGGGCTGTGTTTAGTTCCAATTTCATGCACGCCACAAGTGTATAGAGAGAACAGTGGATCCGACTATTGGACGCCTTATCGAGGGTGTTTCTATAGATAGATATATAGATAGATATCGACTTTTATACCGACAGATACTCATTTCTATTTCTAAATTTCAATAACAAACTTCAAATCTTCAAACAATGGAGGGCTCAACTTAGTGCACTATGCCATAATATTTGACTCACTCAAACGGAAGTTCAAGGAGTGGAAGCTTCCAGGGTATATATGAATCAATTACATATGTGGTTTGTTGCATTATTCCAGCTAATTTCTTTAGAGACTAAGTCTAATATCCTCGTATTGTAGCTTGTTTTATGATGTAACGATACTGACCCGACCCAACTCAATCTGGGTGTTAAG

Coding sequence (CDS)

ATGGCGGACGACTGCACCGACACCTCCGTAGCCACCTCTTCCACTCCACCCAACTGGTGGGATACCCACAGTCACCACCATCATTATAACTCCAACTCCTCTTGCGACGACGACGTTTCAATCTCCACCTCCTCCTTCACCAACGCTTCCAATCACTCCGCTCTCACCCTCGACTGCTCCTCCGCCCAGCTTCTTCCCCACCACGCTTCCGATCATCATCTCTGGACCCAAGTTTTATTGAACATTGGAAACGGCGTGGAAGACATACAACCAAATTTCCTGGAACCCATTGCATGTAGCGATTACCTTAAAAAAATGGACACAAACACCAACTGGGACGACACTTTTCAAACCTTCAACAACAATAACGGACTTCTCACAACCCTAGAAAACGAGCGGTTGTTGAAGCTTTCCAATCTCGTCAACACTTGGTCCATAGCCCTACCCAGCCCTGACGCCCATCTCCGCCATCTCATGGACCAGGAACCCCACCCTCTCCGACCCACCACCCTCCTCGACCCAGACGCCGCCCTCGACCCATGTGCCTCCGCCTTCTTTAGGCGCTCGCTTCATACTCCGATGCCCGCCAAGCCCTTCTATGATAACCACACCGCCACTACCCGTAATTATGGTGATTATATCTCCTTTAATCCACGATTTGCTAAGCCACTTCTCGGTGTTAATCCTTCCATTAAGTCCTTCAATTTGTCACCTCAAACTAAGAAGCAGATTCAACAAATTTCTTCGCCAACAAGAGGTAGTGGGCGAGGAAGTGGAGTTTTGAACGAAGGGAAGAAGAAAAGATCTGAAGAATCTTCTGAAACTGTCACCAAAAAGGCTAAACAAGATAACTCAACAACACCTGCTTCTACTAAGATTCAGCAACCAAAGGTCAAAATTGGGGATAGAATCACGACCCTTCAACAAATTGTGTCACCATTTGGAAAGACTGATACCGCGTCGGTTCTAAACGAAACCATTGGATACATTAAATTCCTACAAGAACAAGTTCAGCTGCTGACGAATCCTTACCTGAAGACGAATTCGTATAAGGATGCATGGCAAAGCTTGGAGAGGAAGGAATCAAAAGGGGAAGGGAAAATGGAGCTAAGGAGCAGAGGGCTGTGTTTAGTTCCAATTTCATGCACGCCACAAGTGTATAGAGAGAACAGTGGATCCGACTATTGGACGCCTTATCGAGGGTGTTTCTATAGATAG

Protein sequence

MADDCTDTSVATSSTPPNWWDTHSHHHHYNSNSSCDDDVSISTSSFTNASNHSALTLDCSSAQLLPHHASDHHLWTQVLLNIGNGVEDIQPNFLEPIACSDYLKKMDTNTNWDDTFQTFNNNNGLLTTLENERLLKLSNLVNTWSIALPSPDAHLRHLMDQEPHPLRPTTLLDPDAALDPCASAFFRRSLHTPMPAKPFYDNHTATTRNYGDYISFNPRFAKPLLGVNPSIKSFNLSPQTKKQIQQISSPTRGSGRGSGVLNEGKKKRSEESSETVTKKAKQDNSTTPASTKIQQPKVKIGDRITTLQQIVSPFGKTDTASVLNETIGYIKFLQEQVQLLTNPYLKTNSYKDAWQSLERKESKGEGKMELRSRGLCLVPISCTPQVYRENSGSDYWTPYRGCFYR

Homology

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BLAST of Cp4.1LG01g07890 vs. ExPASy Swiss-Prot
Match: Q9FYJ6 (Transcription factor bHLH111 OS=Arabidopsis thaliana OX=3702 GN=BHLH111 PE=2 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 9.4e-42
Identity = 124/297 (41.75%), Postives = 170/297 (57.24%), Query Frame = 0


Query: 131 NERLLKLSNLVNT-WSIALP-SPDA--HLRHLMDQEPHPLRPTTLLDPDAALDPCASAFF 190
           ++RL KL++LV   WSIA P +PD   +L H  D +          + D ++       +
Sbjct: 47  DQRLSKLTDLVGKHWSIAPPNNPDMNHNLHHHFDHDHSQ-------NDDISM-------Y 106

Query: 191 RRSLHTPMPAKPFYDNHTA-----------TTRNYGDYISFNPRFAKPLLGVNPS----I 250
           R++L         Y+N ++           ++R++ D      R ++PL  +NPS     
Sbjct: 107 RQALEVKNEEDLCYNNGSSGGGSLFHDPIESSRSFLDI-----RLSRPLTDINPSFKPCF 166

Query: 251 KSFNLSPQTKKQIQQISSPTRGSGRGSGVLNEGKKKRSEESSETVTKKAKQDNSTTPAST 310
           K+ N+S   KK+ Q  S     +    G  N GKKKR EE S+ V+KKAK    +T +  
Sbjct: 167 KALNVSEFNKKEHQTASL----AAVRLGTTNAGKKKRCEEISDEVSKKAKCSEGSTLSPE 226

Query: 311 KIQQPKVKIGDRITTLQQIVSPFGKTDTASVLNETIGYIKFLQEQVQLLTNPYLKTNSYK 370
           K + PK K+ D+ITTLQQIVSPFGKTDTASVL E I YI F QEQV+LL+ PY+K +S K
Sbjct: 227 K-ELPKAKLRDKITTLQQIVSPFGKTDTASVLQEAITYINFYQEQVKLLSTPYMKNSSMK 286

Query: 371 DAWQSLERKE--SKGEGKMELRSRGLCLVPISCTPQVYRENSGSDYWTP-YRGCFYR 406
           D W   +R++   +G   ++LRSRGLCLVPIS TP  YR+NS +DYW P YRG  YR
Sbjct: 287 DPWGGWDREDHNKRGPKHLDLRSRGLCLVPISYTPIAYRDNSATDYWNPTYRGSLYR 319

[Close]

BLAST of Cp4.1LG01g07890 vs. ExPASy Swiss-Prot
Match: Q8GXT3 (Transcription factor bHLH123 OS=Arabidopsis thaliana OX=3702 GN=BHLH123 PE=1 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 1.4e-21
Identity = 82/226 (36.28%), Postives = 118/226 (52.21%), Query Frame = 0


Query: 183 SAFFRRSLHTPMPAKPFYDNHTATTRN---YGDYISFNPRFAKPLLGVNPSIKSFNLSPQ 242
           S +F RS   P P  P   ++ AT  N    G+  +  P  A       P+++   + PQ
Sbjct: 242 STWFLRSSPPPKPHSPLRFSNNATFWNPAAAGNAGAPPPHDASS--NFFPALQPPQIHPQ 301

Query: 243 TKKQIQQISSPTRGSGRGSGVLNEGKKKRSEESSETVTKKAKQDNSTTPASTKIQQPKVK 302
           +  +  +  S  R S       +  + KR     +   K+AK + ++   + K    K K
Sbjct: 302 SFDEQPKNISEIRDS-------SSNEVKRGGNDHQPAAKRAKSEAASPSPAFK---RKEK 361

Query: 303 IGDRITTLQQIVSPFGKTDTASVLNETIGYIKFLQEQVQLLTNPYLKTNSYKDAWQSLER 362
           +GDRI  LQQ+VSPFGKTD ASVL+E I YIKFL +QV  L+NPY+K+ +     QS   
Sbjct: 362 MGDRIAALQQLVSPFGKTDAASVLSEAIEYIKFLHQQVSALSNPYMKSGASLQHQQSDHS 421

Query: 363 KESKGEGKMELRSRGLCLVPISCTPQVYRENSGSDYWTPYRGCFYR 406
            E +   + +LRSRGLCLVP+S T  V  + +  D+WTP  G  +R
Sbjct: 422 TELEVSEEPDLRSRGLCLVPVSSTFPVTHDTT-VDFWTPTFGGTFR 454

[Close]

BLAST of Cp4.1LG01g07890 vs. ExPASy Swiss-Prot
Match: Q8S3D1 (Transcription factor bHLH68 OS=Arabidopsis thaliana OX=3702 GN=BHLH68 PE=1 SV=2)

HSP 1 Score: 101.3 bits (251), Expect = 2.7e-20
Identity = 72/182 (39.56%), Postives = 96/182 (52.75%), Query Frame = 0


Query: 261 LNEGKKKRSEESSE--------TVTKKAKQDNSTTPASTKIQQPKVKIGDRITTLQQIVS 320
           L+EG+    + SSE        +  KK +   S +  ST ++  K K+G RI  L Q+VS
Sbjct: 223 LSEGRHTPPDRSSECNSLEIGGSTNKKPRLQPSPSSQST-LKVRKEKLGGRIAALHQLVS 282

Query: 321 PFGKTDTASVLNETIGYIKFLQEQVQLLTNPYLKTNSY------------------KDAW 380
           PFGKTDTASVL+E IGYI+FLQ Q++ L++PY  T +                   +D  
Sbjct: 283 PFGKTDTASVLSEAIGYIRFLQSQIEALSHPYFGTTASGNMRHQQHLQGDRSCIFPEDPG 342

Query: 381 Q---------------SLERKESKGEGKMELRSRGLCLVPISCTPQVYRENSGSDYWTPY 402
           Q               S + + +  E K +LRSRGLCLVPISCT QV  +N G+DYW P 
Sbjct: 343 QLVNDQCMKRRGASSSSTDNQNASEEPKKDLRSRGLCLVPISCTLQVGSDN-GADYWAPA 402

[Close]

BLAST of Cp4.1LG01g07890 vs. ExPASy Swiss-Prot
Match: Q94JL3 (Transcription factor bHLH112 OS=Arabidopsis thaliana OX=3702 GN=BHLH112 PE=1 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 3.8e-19
Identity = 63/150 (42.00%), Postives = 88/150 (58.67%), Query Frame = 0


Query: 263 EGKKKRSEESSETVTKKAKQDNSTTPASTKIQQP---------KVKIGDRITTLQQIVSP 322
           E K K  +  +++ + K  +DN +     ++  P         K  + D+IT+LQQ+VSP
Sbjct: 240 EDKTKNLKTRAQSESLKRAKDNESAAKKPRVTTPSPLPTFKVRKENLRDQITSLQQLVSP 299

Query: 323 FGKTDTASVLNETIGYIKFLQEQVQLLTNPYLKTNSYKDAWQSLERK-ESKGEGK-MELR 382
           FGKTDTASVL E I YIKFL +QV +L+ PY+K  +     Q +  K +S+ E +  ELR
Sbjct: 300 FGKTDTASVLQEAIEYIKFLHDQVTVLSTPYMKQGASNQQQQQISGKSKSQDENENHELR 359

Query: 383 SRGLCLVPISCTPQVYRENSGSDYWTPYRG 402
             GLCLVPIS T  V  E + +D+WTP  G
Sbjct: 360 GHGLCLVPISSTFPVANETT-ADFWTPTFG 388

[Close]

BLAST of Cp4.1LG01g07890 vs. ExPASy Swiss-Prot
Match: Q9SFZ3 (Transcription factor bHLH110 OS=Arabidopsis thaliana OX=3702 GN=BHLH110 PE=2 SV=2)

HSP 1 Score: 96.7 bits (239), Expect = 6.5e-19
Identity = 60/139 (43.17%), Postives = 86/139 (61.87%), Query Frame = 0


Query: 262 NEGKKKR---SEESSETVTKKAKQDNSTTPASTKIQQPKVKIGDRITTLQQIVSPFGKTD 321
           +EGK+     + ++ E  +KK + ++ ++    K++  K K+GDRI  LQQ+VSPFGKTD
Sbjct: 299 SEGKRHNFLMATKAGENASKKPRVESRSSCPPFKVR--KEKLGDRIAALQQLVSPFGKTD 358

Query: 322 TASVLNETIGYIKFLQEQVQLLTNPYLKTNSYKDAWQS---LERKESKGEGKMELRSRGL 381
           TASVL E IGYIKFLQ Q++ L+ PY++ +  +    S    + +E   E   +LRSRGL
Sbjct: 359 TASVLMEAIGYIKFLQSQIETLSVPYMRASRNRPGKASQLVSQSQEGDEEETRDLRSRGL 418

Query: 382 CLVPISCTPQVYRENSGSD 395
           CLVP+SC    Y    G D
Sbjct: 419 CLVPLSC--MTYVTGDGGD 433

[Close]

BLAST of Cp4.1LG01g07890 vs. NCBI nr
Match: XP_023549380.1 (transcription factor bHLH111 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 812 bits (2098), Expect = 7.96e-297
Identity = 405/405 (100.00%), Postives = 405/405 (100.00%), Query Frame = 0


Query: 1   MADDCTDTSVATSSTPPNWWDTHSHHHHYNSNSSCDDDVSISTSSFTNASNHSALTLDCS 60
           MADDCTDTSVATSSTPPNWWDTHSHHHHYNSNSSCDDDVSISTSSFTNASNHSALTLDCS
Sbjct: 1   MADDCTDTSVATSSTPPNWWDTHSHHHHYNSNSSCDDDVSISTSSFTNASNHSALTLDCS 60

Query: 61  SAQLLPHHASDHHLWTQVLLNIGNGVEDIQPNFLEPIACSDYLKKMDTNTNWDDTFQTFN 120
           SAQLLPHHASDHHLWTQVLLNIGNGVEDIQPNFLEPIACSDYLKKMDTNTNWDDTFQTFN
Sbjct: 61  SAQLLPHHASDHHLWTQVLLNIGNGVEDIQPNFLEPIACSDYLKKMDTNTNWDDTFQTFN 120

Query: 121 NNNGLLTTLENERLLKLSNLVNTWSIALPSPDAHLRHLMDQEPHPLRPTTLLDPDAALDP 180
           NNNGLLTTLENERLLKLSNLVNTWSIALPSPDAHLRHLMDQEPHPLRPTTLLDPDAALDP
Sbjct: 121 NNNGLLTTLENERLLKLSNLVNTWSIALPSPDAHLRHLMDQEPHPLRPTTLLDPDAALDP 180

Query: 181 CASAFFRRSLHTPMPAKPFYDNHTATTRNYGDYISFNPRFAKPLLGVNPSIKSFNLSPQT 240
           CASAFFRRSLHTPMPAKPFYDNHTATTRNYGDYISFNPRFAKPLLGVNPSIKSFNLSPQT
Sbjct: 181 CASAFFRRSLHTPMPAKPFYDNHTATTRNYGDYISFNPRFAKPLLGVNPSIKSFNLSPQT 240

Query: 241 KKQIQQISSPTRGSGRGSGVLNEGKKKRSEESSETVTKKAKQDNSTTPASTKIQQPKVKI 300
           KKQIQQISSPTRGSGRGSGVLNEGKKKRSEESSETVTKKAKQDNSTTPASTKIQQPKVKI
Sbjct: 241 KKQIQQISSPTRGSGRGSGVLNEGKKKRSEESSETVTKKAKQDNSTTPASTKIQQPKVKI 300

Query: 301 GDRITTLQQIVSPFGKTDTASVLNETIGYIKFLQEQVQLLTNPYLKTNSYKDAWQSLERK 360
           GDRITTLQQIVSPFGKTDTASVLNETIGYIKFLQEQVQLLTNPYLKTNSYKDAWQSLERK
Sbjct: 301 GDRITTLQQIVSPFGKTDTASVLNETIGYIKFLQEQVQLLTNPYLKTNSYKDAWQSLERK 360

Query: 361 ESKGEGKMELRSRGLCLVPISCTPQVYRENSGSDYWTPYRGCFYR 405
           ESKGEGKMELRSRGLCLVPISCTPQVYRENSGSDYWTPYRGCFYR
Sbjct: 361 ESKGEGKMELRSRGLCLVPISCTPQVYRENSGSDYWTPYRGCFYR 405

[Close]

BLAST of Cp4.1LG01g07890 vs. NCBI nr
Match: KAG7031435.1 (Transcription factor bHLH, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 781 bits (2017), Expect = 2.30e-284
Identity = 395/412 (95.87%), Postives = 399/412 (96.84%), Query Frame = 0


Query: 1   MADDCTDTSVATSSTPPNWWDTHSHHHH-YNSNSSCDDDVSISTSSFTNASNHSALTLDC 60
           MADDCTDTSVATSSTPPNWWDTH+HHHH YNSNSSCDDDVSISTSSFTNASNHSALTLD 
Sbjct: 1   MADDCTDTSVATSSTPPNWWDTHNHHHHHYNSNSSCDDDVSISTSSFTNASNHSALTLDS 60

Query: 61  SSA------QLLPHHASDHHLWTQVLLNIGNGVEDIQPNFLEPIACSDYLKKMDTNTNWD 120
           SSA       LLPHHASDHHLWTQVLLNIGNGVEDIQPNFLEPIACSDYLKKMDTNTNWD
Sbjct: 61  SSAAAAAAAHLLPHHASDHHLWTQVLLNIGNGVEDIQPNFLEPIACSDYLKKMDTNTNWD 120

Query: 121 DTFQTFNNNNGLLTTLENERLLKLSNLVNTWSIALPSPDAHLRHLMDQEPHPLRPTTLLD 180
           DTFQTFNNNNGLLTTLENERLLKLSNLVNTWSIALPSPDAHLRHL+DQEPHPLRPTTLLD
Sbjct: 121 DTFQTFNNNNGLLTTLENERLLKLSNLVNTWSIALPSPDAHLRHLIDQEPHPLRPTTLLD 180

Query: 181 PDAALDPCASAFFRRSLHTPMPAKPFYDNHTATTRNYGDYISFNPRFAKPLLGVNPSIKS 240
           PDAALDPCASAFFRRSLH PMPAKPFYDNHTATTRNYGDYISFNPRFAKPLLGVNPSIKS
Sbjct: 181 PDAALDPCASAFFRRSLHNPMPAKPFYDNHTATTRNYGDYISFNPRFAKPLLGVNPSIKS 240

Query: 241 FNLSPQTKKQIQQISSPTRGSGRGSGVLNEGKKKRSEESSETVTKKAKQDNSTTPASTKI 300
            NLS Q+KKQIQQISSPTRGSGRGSGVLNEGKKKRSEESSETVTKKAKQDNSTTPASTKI
Sbjct: 241 LNLSAQSKKQIQQISSPTRGSGRGSGVLNEGKKKRSEESSETVTKKAKQDNSTTPASTKI 300

Query: 301 QQPKVKIGDRITTLQQIVSPFGKTDTASVLNETIGYIKFLQEQVQLLTNPYLKTNSYKDA 360
           QQPKVKIGDRITTLQQIVSPFGKTDTASVLNETIGYIKFLQEQVQLLTNPY+K NSYKDA
Sbjct: 301 QQPKVKIGDRITTLQQIVSPFGKTDTASVLNETIGYIKFLQEQVQLLTNPYMKANSYKDA 360

Query: 361 WQSLERKESKGEGKMELRSRGLCLVPISCTPQVYRENSGSDYWTPYRGCFYR 405
           WQSLERKESKGEGKMELRSRGLCLVPISCTPQVYRENSGSDYWTPYRGCFYR
Sbjct: 361 WQSLERKESKGEGKMELRSRGLCLVPISCTPQVYRENSGSDYWTPYRGCFYR 412

[Close]

BLAST of Cp4.1LG01g07890 vs. NCBI nr
Match: XP_022942808.1 (transcription factor bHLH111 [Cucurbita moschata])

HSP 1 Score: 779 bits (2012), Expect = 1.28e-283
Identity = 394/411 (95.86%), Postives = 398/411 (96.84%), Query Frame = 0


Query: 1   MADDCTDTSVATSSTPPNWWDTHSHHHH-YNSNSSCDDDVSISTSSFTNASNHSALTLDC 60
           MADDCTDTSVATSSTPPNWWDTH+HHHH YNS+SSCDDDVSISTSSFTNASNHSALTLD 
Sbjct: 1   MADDCTDTSVATSSTPPNWWDTHNHHHHHYNSSSSCDDDVSISTSSFTNASNHSALTLDS 60

Query: 61  SSA-----QLLPHHASDHHLWTQVLLNIGNGVEDIQPNFLEPIACSDYLKKMDTNTNWDD 120
           SSA      LLPHHASDHHLWTQVLLNIGNGVEDIQPNFLEPIACSDYLKKMDTNTNWDD
Sbjct: 61  SSAAAAAAHLLPHHASDHHLWTQVLLNIGNGVEDIQPNFLEPIACSDYLKKMDTNTNWDD 120

Query: 121 TFQTFNNNNGLLTTLENERLLKLSNLVNTWSIALPSPDAHLRHLMDQEPHPLRPTTLLDP 180
           TFQTFNNNNGLLTTLENERLLKLSNLVNTWSIALPSPDAHLRHLMDQEPHPLRPTTLLDP
Sbjct: 121 TFQTFNNNNGLLTTLENERLLKLSNLVNTWSIALPSPDAHLRHLMDQEPHPLRPTTLLDP 180

Query: 181 DAALDPCASAFFRRSLHTPMPAKPFYDNHTATTRNYGDYISFNPRFAKPLLGVNPSIKSF 240
           DAALDPCASAFFRRSLH PMPAKPFYDNHTATTRNYGDYISFNPRFAKPLLGVNPSIKS 
Sbjct: 181 DAALDPCASAFFRRSLHNPMPAKPFYDNHTATTRNYGDYISFNPRFAKPLLGVNPSIKSL 240

Query: 241 NLSPQTKKQIQQISSPTRGSGRGSGVLNEGKKKRSEESSETVTKKAKQDNSTTPASTKIQ 300
           NLS Q+KKQIQQISSPTRGSGRGSGVLNEGKKKRSEESSETVTKKAKQDNS TPASTKIQ
Sbjct: 241 NLSAQSKKQIQQISSPTRGSGRGSGVLNEGKKKRSEESSETVTKKAKQDNSATPASTKIQ 300

Query: 301 QPKVKIGDRITTLQQIVSPFGKTDTASVLNETIGYIKFLQEQVQLLTNPYLKTNSYKDAW 360
           QPKVKIGDRITTLQQIVSPFGKTDTASVLNETIGYIKFLQEQVQLLTNPY+K NSYKDAW
Sbjct: 301 QPKVKIGDRITTLQQIVSPFGKTDTASVLNETIGYIKFLQEQVQLLTNPYMKANSYKDAW 360

Query: 361 QSLERKESKGEGKMELRSRGLCLVPISCTPQVYRENSGSDYWTPYRGCFYR 405
           QSLERKESKGEGKMELRSRGLCLVPISCTPQVYRENSGSDYWTPYRGCFYR
Sbjct: 361 QSLERKESKGEGKMELRSRGLCLVPISCTPQVYRENSGSDYWTPYRGCFYR 411

[Close]

BLAST of Cp4.1LG01g07890 vs. NCBI nr
Match: KAG6600795.1 (Transcription factor basic helix-loop-helix 111, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 777 bits (2006), Expect = 1.01e-282
Identity = 390/410 (95.12%), Postives = 398/410 (97.07%), Query Frame = 0


Query: 1   MADDCTDTSVATSSTPPNWWDTHSHHHHYNSNSSCDDDVSISTSSFTNASNHSALTLDCS 60
           MADDCTDTSVATSSTPPNWWDTH+HHHH+ +++SCDDDVSISTSSFTNASNHSALTLD S
Sbjct: 1   MADDCTDTSVATSSTPPNWWDTHNHHHHHYNSNSCDDDVSISTSSFTNASNHSALTLDSS 60

Query: 61  SA-----QLLPHHASDHHLWTQVLLNIGNGVEDIQPNFLEPIACSDYLKKMDTNTNWDDT 120
           SA      LLPHHASDHHLWTQVLLNIGNGVEDIQPNFLEPIACSDYLKKMDTNTNWDDT
Sbjct: 61  SAAAAAAHLLPHHASDHHLWTQVLLNIGNGVEDIQPNFLEPIACSDYLKKMDTNTNWDDT 120

Query: 121 FQTFNNNNGLLTTLENERLLKLSNLVNTWSIALPSPDAHLRHLMDQEPHPLRPTTLLDPD 180
           FQTFNNNNGLLTTLENERLLKLSNLVNTWSIALPSPDAHLRHL+DQEPHPLRPTTLLDPD
Sbjct: 121 FQTFNNNNGLLTTLENERLLKLSNLVNTWSIALPSPDAHLRHLIDQEPHPLRPTTLLDPD 180

Query: 181 AALDPCASAFFRRSLHTPMPAKPFYDNHTATTRNYGDYISFNPRFAKPLLGVNPSIKSFN 240
           AALDPCASAFFRRSLH PMPAKPFYDNHTATTRNYGDYISFNPRFAKPLLGVNPSIKS N
Sbjct: 181 AALDPCASAFFRRSLHNPMPAKPFYDNHTATTRNYGDYISFNPRFAKPLLGVNPSIKSLN 240

Query: 241 LSPQTKKQIQQISSPTRGSGRGSGVLNEGKKKRSEESSETVTKKAKQDNSTTPASTKIQQ 300
           LS Q+KKQIQQISSPTRGSGRGSGVLNEGKKKRSEESSETVTKKAKQDNSTTPASTKIQQ
Sbjct: 241 LSAQSKKQIQQISSPTRGSGRGSGVLNEGKKKRSEESSETVTKKAKQDNSTTPASTKIQQ 300

Query: 301 PKVKIGDRITTLQQIVSPFGKTDTASVLNETIGYIKFLQEQVQLLTNPYLKTNSYKDAWQ 360
           PKVKIGDRITTLQQIVSPFGKTDTASVLNETIGYIKFLQEQVQLLTNPY+K NSYKDAWQ
Sbjct: 301 PKVKIGDRITTLQQIVSPFGKTDTASVLNETIGYIKFLQEQVQLLTNPYMKANSYKDAWQ 360

Query: 361 SLERKESKGEGKMELRSRGLCLVPISCTPQVYRENSGSDYWTPYRGCFYR 405
           SLERKESKGEGKMELRSRGLCLVPISCTPQVYRENSGSDYWTPYRGCFYR
Sbjct: 361 SLERKESKGEGKMELRSRGLCLVPISCTPQVYRENSGSDYWTPYRGCFYR 410

[Close]

BLAST of Cp4.1LG01g07890 vs. NCBI nr
Match: XP_022993171.1 (transcription factor bHLH111 [Cucurbita maxima])

HSP 1 Score: 751 bits (1938), Expect = 2.09e-272
Identity = 383/412 (92.96%), Postives = 392/412 (95.15%), Query Frame = 0


Query: 1   MADDCTDTSVATSSTPPNWWDTHSHHHH--YNSNSSCDDDVSISTSSFTNASNHSALTLD 60
           MADDCTD+SVATSSTPPNWW+TH+HHHH  YNSNSSCDDDV ISTSSFTNASNHSALTLD
Sbjct: 1   MADDCTDSSVATSSTPPNWWNTHNHHHHHHYNSNSSCDDDVFISTSSFTNASNHSALTLD 60

Query: 61  CSS-----AQLLPHHASDHHLWTQVLLNIGNGVEDIQPNFLEPIACSDYLKKMDTNTNWD 120
            SS     A LLPHHASDHHLWTQVLLNIGNGVE+IQPNFLEPIACSDYLKKMDT+TNWD
Sbjct: 61  SSSSAAAAAHLLPHHASDHHLWTQVLLNIGNGVEEIQPNFLEPIACSDYLKKMDTHTNWD 120

Query: 121 DTFQTFNNNNGLLTTLENERLLKLSNLVNTWSIALPSPDAHLRHLMDQEPHPLRPTTLLD 180
           DTFQTFNNNNGLLTTLENERLLKLSNLVNTWSIALPSPDAHLRHLMDQEPHPLRPTTLLD
Sbjct: 121 DTFQTFNNNNGLLTTLENERLLKLSNLVNTWSIALPSPDAHLRHLMDQEPHPLRPTTLLD 180

Query: 181 PDAALDPCASAFFRRSLHTPMPAKPFYDNHTATTRNYGDYISFNPRFAKPLLGVNPSIKS 240
           PD+ALDPCASAFFRRSLH PMPAKPF     ATTRNYGDYISFNPRFAKPLLGVNPSI S
Sbjct: 181 PDSALDPCASAFFRRSLHNPMPAKPF-----ATTRNYGDYISFNPRFAKPLLGVNPSINS 240

Query: 241 FNLSPQTKKQIQQISSPTRGSGRGSGVLNEGKKKRSEESSETVTKKAKQDNSTTPASTKI 300
            NLS Q+KKQI+QISSPTRGSGRG GVLNEGKKKRSEESSETVTKKAKQDNSTTPASTKI
Sbjct: 241 LNLSAQSKKQIRQISSPTRGSGRGGGVLNEGKKKRSEESSETVTKKAKQDNSTTPASTKI 300

Query: 301 QQPKVKIGDRITTLQQIVSPFGKTDTASVLNETIGYIKFLQEQVQLLTNPYLKTNSYKDA 360
           QQPKVKIGDRITTLQQIVSPFGKTDTASVLNETIGYIKFLQEQVQLLTNPY+KTNSYKDA
Sbjct: 301 QQPKVKIGDRITTLQQIVSPFGKTDTASVLNETIGYIKFLQEQVQLLTNPYMKTNSYKDA 360

Query: 361 WQSLERKESKGEGKMELRSRGLCLVPISCTPQVYRENSGSDYWTPYRGCFYR 405
           WQSLERKESKGEGKMELRSRGLCLVPISCTPQVYRENSGSDYWTPYRGCFYR
Sbjct: 361 WQSLERKESKGEGKMELRSRGLCLVPISCTPQVYRENSGSDYWTPYRGCFYR 407

[Close]

BLAST of Cp4.1LG01g07890 vs. ExPASy TrEMBL
Match: A0A6J1FVQ7 (transcription factor bHLH111 OS=Cucurbita moschata OX=3662 GN=LOC111447729 PE=4 SV=1)

HSP 1 Score: 779 bits (2012), Expect = 6.21e-284
Identity = 394/411 (95.86%), Postives = 398/411 (96.84%), Query Frame = 0


Query: 1   MADDCTDTSVATSSTPPNWWDTHSHHHH-YNSNSSCDDDVSISTSSFTNASNHSALTLDC 60
           MADDCTDTSVATSSTPPNWWDTH+HHHH YNS+SSCDDDVSISTSSFTNASNHSALTLD 
Sbjct: 1   MADDCTDTSVATSSTPPNWWDTHNHHHHHYNSSSSCDDDVSISTSSFTNASNHSALTLDS 60

Query: 61  SSA-----QLLPHHASDHHLWTQVLLNIGNGVEDIQPNFLEPIACSDYLKKMDTNTNWDD 120
           SSA      LLPHHASDHHLWTQVLLNIGNGVEDIQPNFLEPIACSDYLKKMDTNTNWDD
Sbjct: 61  SSAAAAAAHLLPHHASDHHLWTQVLLNIGNGVEDIQPNFLEPIACSDYLKKMDTNTNWDD 120

Query: 121 TFQTFNNNNGLLTTLENERLLKLSNLVNTWSIALPSPDAHLRHLMDQEPHPLRPTTLLDP 180
           TFQTFNNNNGLLTTLENERLLKLSNLVNTWSIALPSPDAHLRHLMDQEPHPLRPTTLLDP
Sbjct: 121 TFQTFNNNNGLLTTLENERLLKLSNLVNTWSIALPSPDAHLRHLMDQEPHPLRPTTLLDP 180

Query: 181 DAALDPCASAFFRRSLHTPMPAKPFYDNHTATTRNYGDYISFNPRFAKPLLGVNPSIKSF 240
           DAALDPCASAFFRRSLH PMPAKPFYDNHTATTRNYGDYISFNPRFAKPLLGVNPSIKS 
Sbjct: 181 DAALDPCASAFFRRSLHNPMPAKPFYDNHTATTRNYGDYISFNPRFAKPLLGVNPSIKSL 240

Query: 241 NLSPQTKKQIQQISSPTRGSGRGSGVLNEGKKKRSEESSETVTKKAKQDNSTTPASTKIQ 300
           NLS Q+KKQIQQISSPTRGSGRGSGVLNEGKKKRSEESSETVTKKAKQDNS TPASTKIQ
Sbjct: 241 NLSAQSKKQIQQISSPTRGSGRGSGVLNEGKKKRSEESSETVTKKAKQDNSATPASTKIQ 300

Query: 301 QPKVKIGDRITTLQQIVSPFGKTDTASVLNETIGYIKFLQEQVQLLTNPYLKTNSYKDAW 360
           QPKVKIGDRITTLQQIVSPFGKTDTASVLNETIGYIKFLQEQVQLLTNPY+K NSYKDAW
Sbjct: 301 QPKVKIGDRITTLQQIVSPFGKTDTASVLNETIGYIKFLQEQVQLLTNPYMKANSYKDAW 360

Query: 361 QSLERKESKGEGKMELRSRGLCLVPISCTPQVYRENSGSDYWTPYRGCFYR 405
           QSLERKESKGEGKMELRSRGLCLVPISCTPQVYRENSGSDYWTPYRGCFYR
Sbjct: 361 QSLERKESKGEGKMELRSRGLCLVPISCTPQVYRENSGSDYWTPYRGCFYR 411

[Close]

BLAST of Cp4.1LG01g07890 vs. ExPASy TrEMBL
Match: A0A6J1JVK8 (transcription factor bHLH111 OS=Cucurbita maxima OX=3661 GN=LOC111489267 PE=4 SV=1)

HSP 1 Score: 751 bits (1938), Expect = 1.01e-272
Identity = 383/412 (92.96%), Postives = 392/412 (95.15%), Query Frame = 0


Query: 1   MADDCTDTSVATSSTPPNWWDTHSHHHH--YNSNSSCDDDVSISTSSFTNASNHSALTLD 60
           MADDCTD+SVATSSTPPNWW+TH+HHHH  YNSNSSCDDDV ISTSSFTNASNHSALTLD
Sbjct: 1   MADDCTDSSVATSSTPPNWWNTHNHHHHHHYNSNSSCDDDVFISTSSFTNASNHSALTLD 60

Query: 61  CSS-----AQLLPHHASDHHLWTQVLLNIGNGVEDIQPNFLEPIACSDYLKKMDTNTNWD 120
            SS     A LLPHHASDHHLWTQVLLNIGNGVE+IQPNFLEPIACSDYLKKMDT+TNWD
Sbjct: 61  SSSSAAAAAHLLPHHASDHHLWTQVLLNIGNGVEEIQPNFLEPIACSDYLKKMDTHTNWD 120

Query: 121 DTFQTFNNNNGLLTTLENERLLKLSNLVNTWSIALPSPDAHLRHLMDQEPHPLRPTTLLD 180
           DTFQTFNNNNGLLTTLENERLLKLSNLVNTWSIALPSPDAHLRHLMDQEPHPLRPTTLLD
Sbjct: 121 DTFQTFNNNNGLLTTLENERLLKLSNLVNTWSIALPSPDAHLRHLMDQEPHPLRPTTLLD 180

Query: 181 PDAALDPCASAFFRRSLHTPMPAKPFYDNHTATTRNYGDYISFNPRFAKPLLGVNPSIKS 240
           PD+ALDPCASAFFRRSLH PMPAKPF     ATTRNYGDYISFNPRFAKPLLGVNPSI S
Sbjct: 181 PDSALDPCASAFFRRSLHNPMPAKPF-----ATTRNYGDYISFNPRFAKPLLGVNPSINS 240

Query: 241 FNLSPQTKKQIQQISSPTRGSGRGSGVLNEGKKKRSEESSETVTKKAKQDNSTTPASTKI 300
            NLS Q+KKQI+QISSPTRGSGRG GVLNEGKKKRSEESSETVTKKAKQDNSTTPASTKI
Sbjct: 241 LNLSAQSKKQIRQISSPTRGSGRGGGVLNEGKKKRSEESSETVTKKAKQDNSTTPASTKI 300

Query: 301 QQPKVKIGDRITTLQQIVSPFGKTDTASVLNETIGYIKFLQEQVQLLTNPYLKTNSYKDA 360
           QQPKVKIGDRITTLQQIVSPFGKTDTASVLNETIGYIKFLQEQVQLLTNPY+KTNSYKDA
Sbjct: 301 QQPKVKIGDRITTLQQIVSPFGKTDTASVLNETIGYIKFLQEQVQLLTNPYMKTNSYKDA 360

Query: 361 WQSLERKESKGEGKMELRSRGLCLVPISCTPQVYRENSGSDYWTPYRGCFYR 405
           WQSLERKESKGEGKMELRSRGLCLVPISCTPQVYRENSGSDYWTPYRGCFYR
Sbjct: 361 WQSLERKESKGEGKMELRSRGLCLVPISCTPQVYRENSGSDYWTPYRGCFYR 407

[Close]

BLAST of Cp4.1LG01g07890 vs. ExPASy TrEMBL
Match: A0A0A0KQW5 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G269890 PE=4 SV=1)

HSP 1 Score: 504 bits (1299), Expect = 8.22e-175
Identity = 309/477 (64.78%), Postives = 339/477 (71.07%), Query Frame = 0


Query: 1   MADDCTDTSVATS-STPPNWWD---THSHHHHY---------------NSNSSCDDDVSI 60
           MA++CT++SVATS STP NWWD    H+HHHH+               NSNSSC++DVSI
Sbjct: 1   MAEECTESSVATSNSTPSNWWDINHNHNHHHHHHPSLSYNSHWLLQNPNSNSSCEEDVSI 60

Query: 61  STSSFTNASNHSALTLDCSSAQLLPHHASDH-HLWTQVLLNIGNGVE------DIQPNFL 120
           STSSFTNASNH           LLPHH SD+ HLWTQVLLNIGN VE      +I+ NFL
Sbjct: 61  STSSFTNASNH-----------LLPHHPSDNNHLWTQVLLNIGNDVELESNEENIEGNFL 120

Query: 121 EPI---------------ACSDYLKKMDT----NTNWDDTFQTFN----NNNGLLTT--- 180
           E I               ACSDYLKKMDT    N NWDDTFQTFN    NNN LLT+   
Sbjct: 121 ETISSRSSMSTTGIFESTACSDYLKKMDTSNNDNNNWDDTFQTFNTNNNNNNRLLTSHTH 180

Query: 181 -LENERLLKLSNLVNTWSIALPSPDAHLRHL-MDQEPHPLRPTTL-----LDPDAA---- 240
            L+NER LKLSNLVN WSIALP+PD HLRHL MD +   LR +T+     L+PD      
Sbjct: 181 MLQNERFLKLSNLVNRWSIALPNPDPHLRHLTMDDQHDHLRASTMPTHEILEPDGTMPHQ 240

Query: 241 -LDPCASAFFRRSLHTPMPAKPFYDNHTATTRNYGDYISFNPRFAKPLLGVN-----PSI 300
            LDPC S+F RRSL                 +NYGDYISFN R AKP++G+N     P  
Sbjct: 241 GLDPCDSSFLRRSLQN---------------QNYGDYISFNGRLAKPVVGINGSSNNPCF 300

Query: 301 KS-FNLSPQTKKQIQQISSPTRGSGRGSG-VLNEGKKKRSEESS-ETVTKKAKQDNSTTP 360
           KS  NLS  +KKQI QI SPTR SGRGSG V NEGKKKRSEESS ET TKKAKQDNST P
Sbjct: 301 KSSLNLSADSKKQIHQICSPTRISGRGSGGVSNEGKKKRSEESSSETSTKKAKQDNST-P 360

Query: 361 ASTKIQQPKVKIGDRITTLQQIVSPFGKTDTASVLNETIGYIKFLQEQVQLLTNPYLKTN 405
           +S KIQQPKVKIGDRIT LQQIVSPFGKTDTASVL ETIGYIKFLQEQVQLL+NPY+KTN
Sbjct: 361 SSNKIQQPKVKIGDRITALQQIVSPFGKTDTASVLTETIGYIKFLQEQVQLLSNPYMKTN 420

[Close]

BLAST of Cp4.1LG01g07890 vs. ExPASy TrEMBL
Match: A0A1S3CD90 (transcription factor bHLH111 OS=Cucumis melo OX=3656 GN=LOC103499104 PE=4 SV=1)

HSP 1 Score: 496 bits (1278), Expect = 1.18e-171
Identity = 301/478 (62.97%), Postives = 330/478 (69.04%), Query Frame = 0


Query: 1   MADDCTDTSVATS-STPPNWWD---THSHHHHY---------------NSNSSCDDDVSI 60
           MA++CT++SVATS STP NWWD    H+HHHH+               NSNSSC++DVSI
Sbjct: 1   MAEECTESSVATSNSTPSNWWDINHNHNHHHHHHPSLSYNSHWLLPNPNSNSSCEEDVSI 60

Query: 61  STSSFTNASNHSALTLDCSSAQLLPHHASDH-HLWTQVLLNIGNGVE------DIQPNFL 120
           STSSFTN               LLPHH SD+ HLWTQVLLNIGN VE      DI+ NFL
Sbjct: 61  STSSFTN--------------HLLPHHPSDNNHLWTQVLLNIGNDVELQSNEEDIEGNFL 120

Query: 121 E---------------PIACSDYLKKMDT----NTNWDDTFQTFN----NNNGLLTT--- 180
           E               P ACSDYLKKMDT    N NWDDTFQTFN    NNN LLT+   
Sbjct: 121 ETISSRSSMSTTGIFEPTACSDYLKKMDTSNNNNNNWDDTFQTFNTNTNNNNRLLTSSQA 180

Query: 181 --LENERLLKLSNLVNTWSIALPSPDAHLRHLMDQEPHPLRPTTL-----------LDPD 240
             L+NER LKLSNLVN WSIALPSPD HLRHL D +   LR TT+           + P 
Sbjct: 181 HMLQNERFLKLSNLVNRWSIALPSPDPHLRHLTDDQHDHLRATTVPTHEILESADGVVPH 240

Query: 241 AALDPCASAFFRRSLHTPMPAKPFYDNHTATTRNYGDYISFNPRFAKPLLGVNPSIK--- 300
             LDPC S+F RR+L                 +NYGDYISFN R AKP++G+N S     
Sbjct: 241 QGLDPCDSSFLRRTLQN---------------QNYGDYISFNGRLAKPMVGINSSSNNPC 300

Query: 301 ---SFNLSPQTKKQIQQISSPTRGSGRGSG-VLNEGKKKRSEESS-ETVTKKAKQDNSTT 360
              S NLS  +KKQI QI SPTR SGRGSG V NEGKKKRSEESS ET TKKAKQDNST 
Sbjct: 301 FKSSLNLSADSKKQIHQICSPTRISGRGSGGVSNEGKKKRSEESSSETSTKKAKQDNST- 360

Query: 361 PASTKIQQPKVKIGDRITTLQQIVSPFGKTDTASVLNETIGYIKFLQEQVQLLTNPYLKT 405
           P S K+QQPKVKIGDRIT LQQIVSPFGKTDTASVL ETIGYIKFLQEQVQLL+NPY+KT
Sbjct: 361 PYSNKMQQPKVKIGDRITALQQIVSPFGKTDTASVLTETIGYIKFLQEQVQLLSNPYMKT 420

[Close]

BLAST of Cp4.1LG01g07890 vs. ExPASy TrEMBL
Match: A0A6J1E0R5 (transcription factor bHLH111 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111025348 PE=4 SV=1)

HSP 1 Score: 456 bits (1174), Expect = 1.22e-155
Identity = 284/482 (58.92%), Postives = 325/482 (67.43%), Query Frame = 0


Query: 1   MADDCTDTSVATSSTPPNWWDTHSHHHHY------------------NSNSSCDDDVSIS 60
           M D+CT++SVATSSTPPNWWD+H+H+HH+                  NSN+SCD DVS+S
Sbjct: 1   MGDECTESSVATSSTPPNWWDSHNHNHHHHGSPSLSSYSSHWPHQNPNSNTSCDQDVSLS 60

Query: 61  TSSFTNASNHSALTLDCSSAQLLPHHASDHHLWTQVLLNIGNGVE------DIQPNFLEP 120
           TSSF     HSALT++ SS +L     SD+ LWTQVLLNIGNGVE      +I  NFLE 
Sbjct: 61  TSSF-----HSALTVE-SSRRLFDPLPSDNQLWTQVLLNIGNGVELQSDEQEIGENFLEA 120

Query: 121 I--------------ACSDYLKKMDTN--TNWD-----DTFQTFNNNNGLLTT----LEN 180
           I              ACSDYLKKMDTN   NW+     D     NNNNGL+TT     EN
Sbjct: 121 ISSKNISTTGIFESAACSDYLKKMDTNYNNNWNSFPIFDANNNNNNNNGLITTHSHAAEN 180

Query: 181 ERLLKLSNLVNTWSIALPSPDAHLRHLMDQEPHPLRPTTLL---------DPDAA----- 240
           ERLLKLS+LVNTWSIALP         MD EP  LR  T+           P+A      
Sbjct: 181 ERLLKLSSLVNTWSIALP---------MDDEPDHLRAATVPCFGHGLKAEAPEAGTVAPI 240

Query: 241 -LDPCASAFFRRSL-----HTPMPAKPFYDNH----TATTRNYGDYISFNPRFAKPLLGV 300
            L+P A A FRRS         + AK  YD+      A TRN+ DYISFN R  KP++ +
Sbjct: 241 RLEPGA-ALFRRSFGSGGFQNSIGAKQ-YDHSMQLDNAGTRNFADYISFNGRLGKPVINI 300

Query: 301 N----PSIKSFNLSPQTKKQIQQISSPTRGSGRGSGVLNEGKKKRSEESSETVTKKAKQD 360
           N    P  KS NLS  TKKQI Q SSPTR SGRGSGV +EGKKKRSEE SET TKK KQ+
Sbjct: 301 NGINNPCFKSLNLSADTKKQIHQTSSPTRISGRGSGVSSEGKKKRSEECSETATKKTKQE 360

Query: 361 NSTTPASTKIQQPKVKIGDRITTLQQIVSPFGKTDTASVLNETIGYIKFLQEQVQLLTNP 405
           N+T  AS K+QQPKVK+GDRIT LQQIVSPFGKTDTASVL ETIGYIKFLQEQ+QLL+NP
Sbjct: 361 NATA-ASNKMQQPKVKLGDRITALQQIVSPFGKTDTASVLTETIGYIKFLQEQIQLLSNP 420

[Close]

BLAST of Cp4.1LG01g07890 vs. TAIR 10
Match: AT1G31050.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 181.8 bits (460), Expect = 1.1e-45
Identity = 163/466 (34.98%), Postives = 236/466 (50.64%), Query Frame = 0


Query: 1   MADDCTDTSVATSSTPPNWWDTHSHHH--HYNS-----------------NSSCDDD-VS 60
           + ++CT +S        +WW+   HHH  H NS                 N+SC++D +S
Sbjct: 2   LREECTPSS--------SWWEDVQHHHNDHANSISSTSFYHKSSNNNSHANASCEEDNLS 61

Query: 61  ISTSSFTN-------ASNHSALTLD----CSSAQLLPHH--ASDHHLWTQVLLNIGNGVE 120
           +ST   +N       +SNH +L+       SS +LL  H  +S +HLW+   L  G  + 
Sbjct: 62  VSTVRASNRLDLTAESSNHHSLSASNQPASSSDELLRDHVVSSHNHLWSLAFLP-GRSLG 121

Query: 121 DIQPNFLEPIACSDYLKKMDTNT------NWDDTFQTFNNNNGLLTTLENERLLKLSNLV 180
           D   +    IA  +     +  +      N +     ++ N        ++RL KL++LV
Sbjct: 122 DQMMDHHHHIASRNSSTTSELPSFEPACHNGNGNGWIYDPNQVRYDQSSDQRLSKLTDLV 181

Query: 181 NT-WSIALP-SPDA--HLRHLMDQEPHPLRPTTLLDPDAALDPCASAFFRRSLHTPMPAK 240
              WSIA P +PD   +L H  D +          + D ++       +R++L       
Sbjct: 182 GKHWSIAPPNNPDMNHNLHHHFDHDHSQ-------NDDISM-------YRQALEVKNEED 241

Query: 241 PFYDNHTA-----------TTRNYGDYISFNPRFAKPLLGVNPS----IKSFNLSPQTKK 300
             Y+N ++           ++R++ D      R ++PL  +NPS     K+ N+S   KK
Sbjct: 242 LCYNNGSSGGGSLFHDPIESSRSFLDI-----RLSRPLTDINPSFKPCFKALNVSEFNKK 301

Query: 301 QIQQISSPTRGSGRGSGVLNEGKKKRSEESSETVTKKAKQDNSTTPASTKIQQPKVKIGD 360
           + Q  S     +    G  N GKKKR EE S+ V+KKAK    +T +  K + PK K+ D
Sbjct: 302 EHQTASL----AAVRLGTTNAGKKKRCEEISDEVSKKAKCSEGSTLSPEK-ELPKAKLRD 361

Query: 361 RITTLQQIVSPFGKTDTASVLNETIGYIKFLQEQVQLLTNPYLKTNSYKDAWQSLERKE- 406
           +ITTLQQIVSPFGKTDTASVL E I YI F QEQV+LL+ PY+K +S KD W   +R++ 
Sbjct: 362 KITTLQQIVSPFGKTDTASVLQEAITYINFYQEQVKLLSTPYMKNSSMKDPWGGWDREDH 421

[Close]

BLAST of Cp4.1LG01g07890 vs. TAIR 10
Match: AT3G20640.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 105.5 bits (262), Expect = 1.0e-22
Identity = 82/226 (36.28%), Postives = 118/226 (52.21%), Query Frame = 0


Query: 183 SAFFRRSLHTPMPAKPFYDNHTATTRN---YGDYISFNPRFAKPLLGVNPSIKSFNLSPQ 242
           S +F RS   P P  P   ++ AT  N    G+  +  P  A       P+++   + PQ
Sbjct: 242 STWFLRSSPPPKPHSPLRFSNNATFWNPAAAGNAGAPPPHDASS--NFFPALQPPQIHPQ 301

Query: 243 TKKQIQQISSPTRGSGRGSGVLNEGKKKRSEESSETVTKKAKQDNSTTPASTKIQQPKVK 302
           +  +  +  S  R S       +  + KR     +   K+AK + ++   + K    K K
Sbjct: 302 SFDEQPKNISEIRDS-------SSNEVKRGGNDHQPAAKRAKSEAASPSPAFK---RKEK 361

Query: 303 IGDRITTLQQIVSPFGKTDTASVLNETIGYIKFLQEQVQLLTNPYLKTNSYKDAWQSLER 362
           +GDRI  LQQ+VSPFGKTD ASVL+E I YIKFL +QV  L+NPY+K+ +     QS   
Sbjct: 362 MGDRIAALQQLVSPFGKTDAASVLSEAIEYIKFLHQQVSALSNPYMKSGASLQHQQSDHS 421

Query: 363 KESKGEGKMELRSRGLCLVPISCTPQVYRENSGSDYWTPYRGCFYR 406
            E +   + +LRSRGLCLVP+S T  V  + +  D+WTP  G  +R
Sbjct: 422 TELEVSEEPDLRSRGLCLVPVSSTFPVTHDTT-VDFWTPTFGGTFR 454

[Close]

BLAST of Cp4.1LG01g07890 vs. TAIR 10
Match: AT4G29100.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 101.3 bits (251), Expect = 1.9e-21
Identity = 72/182 (39.56%), Postives = 96/182 (52.75%), Query Frame = 0


Query: 261 LNEGKKKRSEESSE--------TVTKKAKQDNSTTPASTKIQQPKVKIGDRITTLQQIVS 320
           L+EG+    + SSE        +  KK +   S +  ST ++  K K+G RI  L Q+VS
Sbjct: 223 LSEGRHTPPDRSSECNSLEIGGSTNKKPRLQPSPSSQST-LKVRKEKLGGRIAALHQLVS 282

Query: 321 PFGKTDTASVLNETIGYIKFLQEQVQLLTNPYLKTNSY------------------KDAW 380
           PFGKTDTASVL+E IGYI+FLQ Q++ L++PY  T +                   +D  
Sbjct: 283 PFGKTDTASVLSEAIGYIRFLQSQIEALSHPYFGTTASGNMRHQQHLQGDRSCIFPEDPG 342

Query: 381 Q---------------SLERKESKGEGKMELRSRGLCLVPISCTPQVYRENSGSDYWTPY 402
           Q               S + + +  E K +LRSRGLCLVPISCT QV  +N G+DYW P 
Sbjct: 343 QLVNDQCMKRRGASSSSTDNQNASEEPKKDLRSRGLCLVPISCTLQVGSDN-GADYWAPA 402

[Close]

BLAST of Cp4.1LG01g07890 vs. TAIR 10
Match: AT1G49830.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 99.0 bits (245), Expect = 9.4e-21
Identity = 60/126 (47.62%), Postives = 81/126 (64.29%), Query Frame = 0


Query: 278 KKAKQD-NSTTPASTKIQQPKVKIGDRITTLQQIVSPFGKTDTASVLNETIGYIKFLQEQ 337
           K+ K+D   ++  + K++  K K+G++ITTLQ +VSP+GKTD ASVL+ET+GYIKFLQ+Q
Sbjct: 109 KRCKRDQKKSSLGNAKVK--KEKVGEKITTLQHLVSPYGKTDAASVLHETMGYIKFLQDQ 168

Query: 338 VQLLTNPYLKTNSYKDAWQSLERKESKGEGK-----MELRSRGLCLVPISCTPQVYRENS 397
           VQ+L+ PY K N   D        E  GE        ELRS GLCLVP++ T  V   N 
Sbjct: 169 VQVLSTPYFKHNPLDD--------EDTGEVNPTMKVKELRSNGLCLVPLAWTVHVANTN- 223

[Close]

BLAST of Cp4.1LG01g07890 vs. TAIR 10
Match: AT1G61660.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 97.4 bits (241), Expect = 2.7e-20
Identity = 63/150 (42.00%), Postives = 88/150 (58.67%), Query Frame = 0


Query: 263 EGKKKRSEESSETVTKKAKQDNSTTPASTKIQQP---------KVKIGDRITTLQQIVSP 322
           E K K  +  +++ + K  +DN +     ++  P         K  + D+IT+LQQ+VSP
Sbjct: 240 EDKTKNLKTRAQSESLKRAKDNESAAKKPRVTTPSPLPTFKVRKENLRDQITSLQQLVSP 299

Query: 323 FGKTDTASVLNETIGYIKFLQEQVQLLTNPYLKTNSYKDAWQSLERK-ESKGEGK-MELR 382
           FGKTDTASVL E I YIKFL +QV +L+ PY+K  +     Q +  K +S+ E +  ELR
Sbjct: 300 FGKTDTASVLQEAIEYIKFLHDQVTVLSTPYMKQGASNQQQQQISGKSKSQDENENHELR 359

Query: 383 SRGLCLVPISCTPQVYRENSGSDYWTPYRG 402
             GLCLVPIS T  V  E + +D+WTP  G
Sbjct: 360 GHGLCLVPISSTFPVANETT-ADFWTPTFG 388

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g07890 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FYJ6	9.4e-42	41.75	Transcription factor bHLH111 OS=Arabidopsis thaliana OX=3702 GN=BHLH111 PE=2 SV=...	[more]
Q8GXT3	1.4e-21	36.28	Transcription factor bHLH123 OS=Arabidopsis thaliana OX=3702 GN=BHLH123 PE=1 SV=...	[more]
Q8S3D1	2.7e-20	39.56	Transcription factor bHLH68 OS=Arabidopsis thaliana OX=3702 GN=BHLH68 PE=1 SV=2	[more]
Q94JL3	3.8e-19	42.00	Transcription factor bHLH112 OS=Arabidopsis thaliana OX=3702 GN=BHLH112 PE=1 SV=...	[more]
Q9SFZ3	6.5e-19	43.17	Transcription factor bHLH110 OS=Arabidopsis thaliana OX=3702 GN=BHLH110 PE=2 SV=...	[more]

BLAST of Cp4.1LG01g07890 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023549380.1	7.96e-297	100.00	transcription factor bHLH111 [Cucurbita pepo subsp. pepo]	[more]
KAG7031435.1	2.30e-284	95.87	Transcription factor bHLH, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022942808.1	1.28e-283	95.86	transcription factor bHLH111 [Cucurbita moschata]	[more]
KAG6600795.1	1.01e-282	95.12	Transcription factor basic helix-loop-helix 111, partial [Cucurbita argyrosperma...	[more]
XP_022993171.1	2.09e-272	92.96	transcription factor bHLH111 [Cucurbita maxima]	[more]

BLAST of Cp4.1LG01g07890 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FVQ7	6.21e-284	95.86	transcription factor bHLH111 OS=Cucurbita moschata OX=3662 GN=LOC111447729 PE=4 ...	[more]
A0A6J1JVK8	1.01e-272	92.96	transcription factor bHLH111 OS=Cucurbita maxima OX=3661 GN=LOC111489267 PE=4 SV...	[more]
A0A0A0KQW5	8.22e-175	64.78	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G269890 PE=4 S...	[more]
A0A1S3CD90	1.18e-171	62.97	transcription factor bHLH111 OS=Cucumis melo OX=3656 GN=LOC103499104 PE=4 SV=1	[more]
A0A6J1E0R5	1.22e-155	58.92	transcription factor bHLH111 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111...	[more]

BLAST of Cp4.1LG01g07890 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G31050.1	1.1e-45	34.98	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G20640.1	1.0e-22	36.28	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT4G29100.1	1.9e-21	39.56	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G49830.1	9.4e-21	47.62	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G61660.1	2.7e-20	42.00	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 294..361 e-value: 7.9E-6 score: 27.9
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 299..350
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 279..294
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 236..295
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 261..278
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 236..256
None	No IPR available	PANTHER	PTHR16223	TRANSCRIPTION FACTOR BHLH83-RELATED	coord: 19..392
None	No IPR available	PANTHER	PTHR16223:SF171	TRANSCRIPTION FACTOR BHLH111	coord: 19..392
None	No IPR available	CDD	cd11393	bHLH_AtbHLH_like	coord: 294..340 e-value: 1.75502E-19 score: 79.5327
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 284..333 score: 10.55004

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g07890.1	Cp4.1LG01g07890.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding