Cp4.1LG01g07240 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG01g07240
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	U-box domain-containing protein 62-like
Location	Cp4.1LG01: 5713166 .. 5716161 (+)
RNA-Seq Expression	Cp4.1LG01g07240
Synteny	Cp4.1LG01g07240

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCTCCGAAGACATGAATGGGCTCAACTCCCACCTCGTCTTCCAAGAGGATGCCATGCCCTTCAATTGCGCCACCACGTCGCAGCGCCGCGTCGCCGACCCAGCTCCCAAAACCCGCGAGCTCTGCGGTTTCATGGACGATAAGCTCTTACCTGTCGACCGCGACCGATTTTTTGTTCACCAGGGCGAAGATTTTCGCCGGAGTGTGTTCGGTCATAGCCGGAATTGGAATGGTAATGAGGGTGCAAGAACTGGTAGTGGCAAAGGGTCGGATGAGGAAGATGATGACGATGAAGATGACGATGAGGAAGATGAAGTCGATGATGGTGATGATGATGTTGTTGTTGAGGGGCTTGCTTCTTTGGATGATGTCAATAAGTGTACTAAAACTGCTAACCCTAACAACACCAACAAAGACATAAGCGATCAGAGTAGTGATGGGTTGAAGAATGGGGCGAACAAATTGGGGAATGGGAAGCTTAAGCACCATTCATCGTTTGGTAAGAACTTTGTACATCCAATTTTCAATCCCCAAATAGAAACTATGATTTTAGAATGTTTGTTTGAATAATCTGCTCCCATTTTGAAAATTACTATAAATTGTTCTTATGGGTTTTAGGTGGAACTCTGTTGGTCAAGGATGGCTTGGTTGGCTCTTCAGGCTGTAACACAGGAGCTACTCGGAACGACCCAAATGCGGTTACAATAGCAGAACCTGAAAATGCTTATTATTCCCAGTATTTGCAAGGCACTGAGGGATCTACTTCTGGGCAGAAGGATTTAGCTATAGAAAATGGATGTGGTTTTGGGAGAAGGGATGTTTCGTTTTCAAGCGAACCTGAAGAGTCTCTGAGAGCAATTCTCACCGACCCTGTGACGTGAGTTCTAAGTGTTTCAATTATGTTTCATTTGGTTGAGCCTGTCAATCATGTTGAAGTATGAACTTGATGCTTGCAGTTTGATTCTAGTGTGTTTTCATGAAGGAAATATGATATGTTCTTATATTTTCTTCACTTATTTATCCATCTCAATTGTTTCTGGTGATATATTTACTTCTTCTTGGAATCAGGGGCGCTCTCATGGACGATGCAATGATATTGCCGTGTGGGCATTCCTTTGGGAGTGGTGGAATACAACATGTTCTTAGAGTAGTGAGTTACTGGCAAGAACACTGCTCATCTATGCCGTTTAAATTGCTTTTCATCATGTTAGCTATCATTTTTTCCATCATGTTCAAACATAAGAGGTGCATTGAAACTGTTTGGTGGGTAGAATCCTGATCATGAGAGACCCTTTTCAGGCCGTGAGATTTATGAAAATATAACTATCAAAGTTCCAAGGAATTTCAAAATTAAAGAAGATAACAATTTTTGCTATAAAAATGAGTCTACTACCTTATATGTAGCAGGCTTGAACTCGAATGTTGGCATCTATAAGTTCATAGCTTTTCAGTTTTCGATAATCGGACTCGAGTTTTGTCACGACTGAGCTTATGAACTTGTATTTTTCAGTGTATCATGATGTAAAACTTGGCGACCTGTCTCTTAGCTGTGGGAATTCAAGTAATTTGGCTAGATAACCAGAATTTAGTCTTAGTGAGTTTGTCATGCATTTTCTTGATTTGGATTCTGAATACTCACTTTCTGTTGCAAGTATTAATGTATACCAATCTTGTGCACCTTAATTTCCATTGCTATATGGCTGCTCTGTTCATATTAATCAGTCAATTATTTTGTCGACCTCGGTTGAAATAGTTTCTGCATTTCTCTTGATGTCTTTTCAGAAATCTTGTTACTCATGTTCTCAGTCAGTTTCTGAAGATTCTATTGCTCAAAACTTATGTGAGTACACATTTCTCCGCACTTACTCTCAGAATAGTGAAGTAATAGATTGATATTCTCTTTGAACGTCGTTGTCATGAACATTTTCACGATCTTCGTTTTCGTGTCGTGATATTTTCATCTTCAGCTCTACAAGCTGCAGTCCAAGCATTCCGCCGGGAAGAAGAACTGTTATTTTACCGCTCACCGAAAAGGAGAAGGGAGAGGTTTGAGCAGGTATTTGCTTGGTACCTGGCAAGTTCTACTCGTGGATTTACGTTCGTCGCACTTTCGCTTCAGAGCGAACGATATTCTCGTACTGCAACTGCTTCCAAGTTTTTAATAATCATTGTAGTGTTTGCATATGTAGGATAAAGGTGGTTATGGTGATTCAACTCTCATGGATACTCCACGAGGTCGTGGTGTTCAGTTTCCTTTTGCAGTGACAGATAGGGTGATTATCAAGGTGAGCATAAAACTGTAGTCTTATTTAGTTCCTATATTATAACATGTTGAAACTAATATTACAGCCTTAACGGATCAGGGGAACAAGAGGACGCCGCAGCGTTTTGTGGGACGTGAGGCTGTCGTTACAGCACAGTGCTTGAATGGATGGTTTGTCATTTTTTGTTCCTCATTTTATTTTGTTTCCAAAACGAGTAAATGGGGCAACGAAAAATAAGATTGAAATTTGTTTTCTGCAAATGCTACCTGATCTTAGTTTACAAAATGGCATCTTCTTACACTACAGGTATGTGGTGAAAACACTAGACAATGCAGAGAGTGTAAAGTTGCAGTACCGATCGCTTGCGAGGGTTCCAAATGATGCAGCATCGAAGACGATAACAAAGAAGGTTGCACCGAATTGGCTTTAGACTCGCAATATAGATTATAGGAACTTGAATTTGAGATGGATTAGGAGCCTAGTTTTTAGAGGCTCATTATGTTGGATTTACATACACACAAAGGAATTGCTGTAAATATGGTTATGACAGATATTTTGCATGGTTGAGCTTAAGGAGAGGTAGAATGAGTTTTGAGACGTGAGTAGCATTGTGTTCAAGTAAAGAGCTCACCTAAATTTTGACACCTGAGTAGCATTGTTCTGGCTTGGATTGTAACAGTGCGTTTTTAGATCAGAATGTTTCTATCTCTAGGAGATTAATTTGAATTT

mRNA sequence

ATGTCCTCCGAAGACATGAATGGGCTCAACTCCCACCTCGTCTTCCAAGAGGATGCCATGCCCTTCAATTGCGCCACCACGTCGCAGCGCCGCGTCGCCGACCCAGCTCCCAAAACCCGCGAGCTCTGCGGTGGAACTCTGTTGGTCAAGGATGGCTTGGTTGGCTCTTCAGGCTGTAACACAGGAGCTACTCGGAACGACCCAAATGCGGTTACAATAGCAGAACCTGAAAATGCTTATTATTCCCAGTATTTGCAAGGCACTGAGGGATCTACTTCTGGGCAGAAGGATTTAGCTATAGAAAATGGATGTGGTTTTGGGAGAAGGGATGTTTCGTTTTCAAGCGAACCTGAAGAGTCTCTGAGAGCAATTCTCACCGACCCTGTGACGGGCGCTCTCATGGACGATGCAATGATATTGCCGTGTGGGCATTCCTTTGGGAGTGGTGGAATACAACATGTTCTTAGAGTAAAATCTTGTTACTCATGTTCTCAGTCAGTTTCTGAAGATTCTATTGCTCAAAACTTATCTCTACAAGCTGCAGTCCAAGCATTCCGCCGGGAAGAAGAACTGTTATTTTACCGCTCACCGAAAAGGAGAAGGGAGAGGTTTGAGCAGGATAAAGGTGGTTATGGTGATTCAACTCTCATGGATACTCCACGAGGTCGTGGTGTTCAGTTTCCTTTTGCAGTGACAGATAGGGTGATTATCAAGGGGAACAAGAGGACGCCGCAGCGTTTTGTGGGACGTGAGGCTGTCGTTACAGCACAGTGCTTGAATGGATGGTATGTGGTGAAAACACTAGACAATGCAGAGAGTGTAAAGTTGCAGTACCGATCGCTTGCGAGGGTTCCAAATGATGCAGCATCGAAGACGATAACAAAGAAGGTTGCACCGAATTGGCTTTAGACTCGCAATATAGATTATAGGAACTTGAATTTGAGATGGATTAGGAGCCTAGTTTTTAGAGGCTCATTATGTTGGATTTACATACACACAAAGGAATTGCTGTAAATATGGTTATGACAGATATTTTGCATGGTTGAGCTTAAGGAGAGGTAGAATGAGTTTTGAGACGTGAGTAGCATTGTGTTCAAGTAAAGAGCTCACCTAAATTTTGACACCTGAGTAGCATTGTTCTGGCTTGGATTGTAACAGTGCGTTTTTAGATCAGAATGTTTCTATCTCTAGGAGATTAATTTGAATTT

Coding sequence (CDS)

ATGTCCTCCGAAGACATGAATGGGCTCAACTCCCACCTCGTCTTCCAAGAGGATGCCATGCCCTTCAATTGCGCCACCACGTCGCAGCGCCGCGTCGCCGACCCAGCTCCCAAAACCCGCGAGCTCTGCGGTGGAACTCTGTTGGTCAAGGATGGCTTGGTTGGCTCTTCAGGCTGTAACACAGGAGCTACTCGGAACGACCCAAATGCGGTTACAATAGCAGAACCTGAAAATGCTTATTATTCCCAGTATTTGCAAGGCACTGAGGGATCTACTTCTGGGCAGAAGGATTTAGCTATAGAAAATGGATGTGGTTTTGGGAGAAGGGATGTTTCGTTTTCAAGCGAACCTGAAGAGTCTCTGAGAGCAATTCTCACCGACCCTGTGACGGGCGCTCTCATGGACGATGCAATGATATTGCCGTGTGGGCATTCCTTTGGGAGTGGTGGAATACAACATGTTCTTAGAGTAAAATCTTGTTACTCATGTTCTCAGTCAGTTTCTGAAGATTCTATTGCTCAAAACTTATCTCTACAAGCTGCAGTCCAAGCATTCCGCCGGGAAGAAGAACTGTTATTTTACCGCTCACCGAAAAGGAGAAGGGAGAGGTTTGAGCAGGATAAAGGTGGTTATGGTGATTCAACTCTCATGGATACTCCACGAGGTCGTGGTGTTCAGTTTCCTTTTGCAGTGACAGATAGGGTGATTATCAAGGGGAACAAGAGGACGCCGCAGCGTTTTGTGGGACGTGAGGCTGTCGTTACAGCACAGTGCTTGAATGGATGGTATGTGGTGAAAACACTAGACAATGCAGAGAGTGTAAAGTTGCAGTACCGATCGCTTGCGAGGGTTCCAAATGATGCAGCATCGAAGACGATAACAAAGAAGGTTGCACCGAATTGGCTTTAG

Protein sequence

MSSEDMNGLNSHLVFQEDAMPFNCATTSQRRVADPAPKTRELCGGTLLVKDGLVGSSGCNTGATRNDPNAVTIAEPENAYYSQYLQGTEGSTSGQKDLAIENGCGFGRRDVSFSSEPEESLRAILTDPVTGALMDDAMILPCGHSFGSGGIQHVLRVKSCYSCSQSVSEDSIAQNLSLQAAVQAFRREEELLFYRSPKRRRERFEQDKGGYGDSTLMDTPRGRGVQFPFAVTDRVIIKGNKRTPQRFVGREAVVTAQCLNGWYVVKTLDNAESVKLQYRSLARVPNDAASKTITKKVAPNWL

Homology

[Close]

BLAST of Cp4.1LG01g07240 vs. ExPASy Swiss-Prot
Match: Q6DBN5 (U-box domain-containing protein 62 OS=Arabidopsis thaliana OX=3702 GN=PUB62 PE=2 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 1.4e-69
Identity = 143/260 (55.00%), Postives = 177/260 (68.08%), Query Frame = 0


Query: 51  DGLVGSSGCNTGATRNDPNA---VTIAEPENAYYSQYLQGTEG---STSGQKDLAIENGC 110
           DG  G  G N  A  +  +A   + + +   AYYSQ+ +  E    S + +  +A +NGC
Sbjct: 104 DGNEGDIGMNKDAGEDSVSAGAVIVVGQDNAAYYSQHFKTVEASFVSRNEESSIAADNGC 163

Query: 111 GF-GRRDVSFSSEPE-ESLRAILTDPVTGALMDDAMILPCGHSFGSGGIQHVLRVKSCYS 170
            F GRRD+S SS    ESLR IL+DP TG+LM DAMILPCGH+FG+GGI+ V ++K+C +
Sbjct: 164 DFSGRRDLSSSSSNSIESLRTILSDPTTGSLMADAMILPCGHTFGAGGIEQVKQMKACCT 223

Query: 171 CSQSVSEDSIAQNLSLQAAVQAFRREEELLFYRSPKRRRERFEQDKGGYGDSTLMDTPRG 230
           CSQ VSEDSI  NL+L+ AVQAF REE        KR+RE F+Q++  +G +      R 
Sbjct: 224 CSQPVSEDSITPNLTLRVAVQAFCREENSQSNHPSKRKREGFDQERRAFGVTNHSGRSRN 283

Query: 231 RGVQFPFAVTDRVIIKGNKRTPQRFVGREAVVTAQCLNGWYVVKTLDNAESVKLQYRSLA 290
           +   FPFAV DRVIIKGNKRTP RFVGREAVVT QCLNGWYVVKTLDNAESVKLQYRSLA
Sbjct: 284 KSNHFPFAVADRVIIKGNKRTPPRFVGREAVVTTQCLNGWYVVKTLDNAESVKLQYRSLA 343

Query: 291 RVPNDAASKTITKKVAPNWL 303
           + P D ++K    K+  NWL
Sbjct: 344 KAPEDPSAKATPNKMVSNWL 363

[Close]

BLAST of Cp4.1LG01g07240 vs. ExPASy Swiss-Prot
Match: Q58FY4 (U-box domain-containing protein 63 OS=Arabidopsis thaliana OX=3702 GN=PUB63 PE=2 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 1.2e-52
Identity = 101/185 (54.59%), Postives = 142/185 (76.76%), Query Frame = 0


Query: 119 ESLRAILTDPVTGALMDDAMILPCGHSFGSGGIQHVLRVKSCYSCSQSVSEDSIAQNLSL 178
           ESL+AIL+DPVTGALM+DA ILPCGHSFG+GG++ V ++K+C++CSQ   E S   NLSL
Sbjct: 200 ESLKAILSDPVTGALMNDATILPCGHSFGAGGLKEVKKMKACFTCSQPTLEGSEKPNLSL 259

Query: 179 QAAVQAFRREEELLFYRSPKRRRERFEQDKGGYGDSTLMDTPR-GRGVQFPFAVTDRVII 238
           +  V AFR+EE+     + KRR+ER +Q K  +    + +TP+  RG+QFPF++ D +II
Sbjct: 260 RIVVHAFRQEEDSDHIHTLKRRKERSDQ-KRSFCIPNITETPKSSRGIQFPFSIGDHIII 319

Query: 239 KGNKRTPQRFVGREAVVTAQCLNGWYVVKTLDNAESVKLQYRSLARVPNDAASKTITKKV 298
           +GNKRTP RFVGR AV+  QCLNGWYVVKT+DN+ES+KLQ+ SLA++ +++++K    ++
Sbjct: 320 EGNKRTPPRFVGRIAVIMTQCLNGWYVVKTVDNSESIKLQHCSLAKISDNSSTKVTVAEM 379

Query: 299 APNWL 303
            P+WL
Sbjct: 380 PPSWL 383

[Close]

BLAST of Cp4.1LG01g07240 vs. NCBI nr
Match: XP_023541871.1 (U-box domain-containing protein 62 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 551 bits (1421), Expect = 3.70e-195
Identity = 302/426 (70.89%), Postives = 302/426 (70.89%), Query Frame = 0


Query: 1   MSSEDMNGLNSHLVFQEDAMPFNCATTSQRRVADPAPKTRELCG---------------- 60
           MSSEDMNGLNSHLVFQEDAMPFNCATTSQRRVADPAPKTRELCG                
Sbjct: 1   MSSEDMNGLNSHLVFQEDAMPFNCATTSQRRVADPAPKTRELCGFMDDKLLPVDRDRFFV 60

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 61  HQGEDFRRSVFGHSRNWNGNEGARTGSGKGSDEEDDDDEDDDEEDEVDDGDDDVVVEGLA 120

Query: 121 ------------------------------------------------GTLLVKDGLVGS 180
                                                           GTLLVKDGLVGS
Sbjct: 121 SLDDVNKCTKTANPNNTNKDISDQSSDGLKNGANKLGNGKLKHHSSFGGTLLVKDGLVGS 180

Query: 181 SGCNTGATRNDPNAVTIAEPENAYYSQYLQGTEGSTSGQKDLAIENGCGFGRRDVSFSSE 240
           SGCNTGATRNDPNAVTIAEPENAYYSQYLQGTEGSTSGQKDLAIENGCGFGRRDVSFSSE
Sbjct: 181 SGCNTGATRNDPNAVTIAEPENAYYSQYLQGTEGSTSGQKDLAIENGCGFGRRDVSFSSE 240

Query: 241 PEESLRAILTDPVTGALMDDAMILPCGHSFGSGGIQHVLRVKSCYSCSQSVSEDSIAQNL 300
           PEESLRAILTDPVTGALMDDAMILPCGHSFGSGGIQHVLRVKSCYSCSQSVSEDSIAQNL
Sbjct: 241 PEESLRAILTDPVTGALMDDAMILPCGHSFGSGGIQHVLRVKSCYSCSQSVSEDSIAQNL 300

Query: 301 SLQAAVQAFRREEELLFYRSPKRRRERFEQDKGGYGDSTLMDTPRGRGVQFPFAVTDRVI 302
           SLQAAVQAFRREEELLFYRSPKRRRERFEQDKGGYGDSTLMDTPRGRGVQFPFAVTDRVI
Sbjct: 301 SLQAAVQAFRREEELLFYRSPKRRRERFEQDKGGYGDSTLMDTPRGRGVQFPFAVTDRVI 360

[Close]

BLAST of Cp4.1LG01g07240 vs. NCBI nr
Match: XP_022942528.1 (U-box domain-containing protein 62 isoform X1 [Cucurbita moschata] >KAG6600875.1 U-box domain-containing protein 62, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031509.1 U-box domain-containing protein 62 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 551 bits (1421), Expect = 3.70e-195
Identity = 302/426 (70.89%), Postives = 302/426 (70.89%), Query Frame = 0


Query: 1   MSSEDMNGLNSHLVFQEDAMPFNCATTSQRRVADPAPKTRELCG---------------- 60
           MSSEDMNGLNSHLVFQEDAMPFNCATTSQRRVADPAPKTRELCG                
Sbjct: 1   MSSEDMNGLNSHLVFQEDAMPFNCATTSQRRVADPAPKTRELCGFMDDKLLPVDRDRFFV 60

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 61  HQGEDFRRSVFGHSRNWNGNESARTGSGKGSDEEDDDDEDDDDEDEVDDGDDDVVVEGLA 120

Query: 121 ------------------------------------------------GTLLVKDGLVGS 180
                                                           GTLLVKDGLVGS
Sbjct: 121 SLDDVNKCTKTANPNITNKDISDQSSDGLKNGTNKLGNGKLKHHSSFGGTLLVKDGLVGS 180

Query: 181 SGCNTGATRNDPNAVTIAEPENAYYSQYLQGTEGSTSGQKDLAIENGCGFGRRDVSFSSE 240
           SGCNTGATRNDPNAVTIAEPENAYYSQYLQGTEGSTSGQKDLAIENGCGFGRRDVSFSSE
Sbjct: 181 SGCNTGATRNDPNAVTIAEPENAYYSQYLQGTEGSTSGQKDLAIENGCGFGRRDVSFSSE 240

Query: 241 PEESLRAILTDPVTGALMDDAMILPCGHSFGSGGIQHVLRVKSCYSCSQSVSEDSIAQNL 300
           PEESLRAILTDPVTGALMDDAMILPCGHSFGSGGIQHVLRVKSCYSCSQSVSEDSIAQNL
Sbjct: 241 PEESLRAILTDPVTGALMDDAMILPCGHSFGSGGIQHVLRVKSCYSCSQSVSEDSIAQNL 300

Query: 301 SLQAAVQAFRREEELLFYRSPKRRRERFEQDKGGYGDSTLMDTPRGRGVQFPFAVTDRVI 302
           SLQAAVQAFRREEELLFYRSPKRRRERFEQDKGGYGDSTLMDTPRGRGVQFPFAVTDRVI
Sbjct: 301 SLQAAVQAFRREEELLFYRSPKRRRERFEQDKGGYGDSTLMDTPRGRGVQFPFAVTDRVI 360

[Close]

BLAST of Cp4.1LG01g07240 vs. NCBI nr
Match: XP_022984283.1 (U-box domain-containing protein 62-like [Cucurbita maxima])

HSP 1 Score: 542 bits (1397), Expect = 2.21e-191
Identity = 298/434 (68.66%), Postives = 299/434 (68.89%), Query Frame = 0


Query: 1   MSSEDMNGLNSHLVFQEDAMPFNCATTSQRRVADPAPKTRELCG---------------- 60
           MSSEDMNGLNSHLVFQEDAMPFNCATTSQRRVADPAPKTRELCG                
Sbjct: 1   MSSEDMNGLNSHLVFQEDAMPFNCATTSQRRVADPAPKTRELCGFMDDKLLPVDRDRFFA 60

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 61  HQVEDFRRSVFGHSRNWNGNKSARTGSGKGSDEEDDDDEDDDGEDEVDDGEDEVDDGDDD 120

Query: 121 --------------------------------------------------------GTLL 180
                                                                   GTLL
Sbjct: 121 DVVVEGLASLDDVNKCTKTANPNNTNKDISDQSSDGLKNETNKLGNGKLKHHSSFGGTLL 180

Query: 181 VKDGLVGSSGCNTGATRNDPNAVTIAEPENAYYSQYLQGTEGSTSGQKDLAIENGCGFGR 240
           +KDGLVGSSGCNTGATRNDPNAVTIAEPENAYYSQYLQGTEGSTSGQKDLAIENGCGFGR
Sbjct: 181 IKDGLVGSSGCNTGATRNDPNAVTIAEPENAYYSQYLQGTEGSTSGQKDLAIENGCGFGR 240

Query: 241 RDVSFSSEPEESLRAILTDPVTGALMDDAMILPCGHSFGSGGIQHVLRVKSCYSCSQSVS 300
           RDVS SSEPEESLRAILTDPVTG LMDDAMILPCGHSFGSGGIQHVLRVKSCYSCSQSVS
Sbjct: 241 RDVSLSSEPEESLRAILTDPVTGVLMDDAMILPCGHSFGSGGIQHVLRVKSCYSCSQSVS 300

Query: 301 EDSIAQNLSLQAAVQAFRREEELLFYRSPKRRRERFEQDKGGYGDSTLMDTPRGRGVQFP 302
           EDSIAQNLSLQAAVQAF REEELLFYRSPKRRRERFEQDKGGYGDSTLMDTPRGRGVQFP
Sbjct: 301 EDSIAQNLSLQAAVQAFHREEELLFYRSPKRRRERFEQDKGGYGDSTLMDTPRGRGVQFP 360

[Close]

BLAST of Cp4.1LG01g07240 vs. NCBI nr
Match: XP_022942529.1 (U-box domain-containing protein 62 isoform X2 [Cucurbita moschata])

HSP 1 Score: 478 bits (1229), Expect = 4.96e-166
Identity = 263/389 (67.61%), Postives = 265/389 (68.12%), Query Frame = 0


Query: 1   MSSEDMNGLNSHLVFQEDAMPFNCATTSQRRVADPAPKTRELCG---------------- 60
           MSSEDMNGLNSHLVFQEDAMPFNCATTSQRRVADPAPKTRELCG                
Sbjct: 1   MSSEDMNGLNSHLVFQEDAMPFNCATTSQRRVADPAPKTRELCGFMDDKLLPVDRDRFFV 60

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 61  HQGEDFRRSVFGHSRNWNGNESARTGSGKGSDEEDDDDEDDDDEDEVDDGDDDVVVEGLA 120

Query: 121 ------------------------------------------------GTLLVKDGLVGS 180
                                                           GTLLVKDGLVGS
Sbjct: 121 SLDDVNKCTKTANPNITNKDISDQSSDGLKNGTNKLGNGKLKHHSSFGGTLLVKDGLVGS 180

Query: 181 SGCNTGATRNDPNAVTIAEPENAYYSQYLQGTEGSTSGQKDLAIENGCGFGRRDVSFSSE 240
           SGCNTGATRNDPNAVTIAEPENAYYSQYLQGTEGSTSGQKDLAIENGCGFGRRDVSFSSE
Sbjct: 181 SGCNTGATRNDPNAVTIAEPENAYYSQYLQGTEGSTSGQKDLAIENGCGFGRRDVSFSSE 240

Query: 241 PEESLRAILTDPVTGALMDDAMILPCGHSFGSGGIQHVLRVKSCYSCSQSVSEDSIAQNL 265
           PEESLRAILTDPVTGALMDDAMILPCGHSFGSGGIQHVLRVKSCYSCSQSVSEDSIAQNL
Sbjct: 241 PEESLRAILTDPVTGALMDDAMILPCGHSFGSGGIQHVLRVKSCYSCSQSVSEDSIAQNL 300

[Close]

BLAST of Cp4.1LG01g07240 vs. NCBI nr
Match: XP_022146865.1 (U-box domain-containing protein 62 isoform X2 [Momordica charantia])

HSP 1 Score: 472 bits (1215), Expect = 1.04e-163
Identity = 266/434 (61.29%), Postives = 280/434 (64.52%), Query Frame = 0


Query: 1   MSSEDMNGLNSHLVFQEDAMPFNCATTSQRRVADPAPKTRELCG---------------- 60
           MSSEDMNGL+S LVF ++AMPFNCA T QRRV DP PKTRELCG                
Sbjct: 1   MSSEDMNGLSSQLVFSDEAMPFNCANTPQRRVGDPGPKTRELCGFMDDKLFPVDRDRFFA 60

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 61  HQGADFRRSVFSDSRNWNGSARSGSGKGSEEEDDDDDDDDEENEVDDGDDDVEGLVSMDD 120

Query: 121 --------------------------------------------GTLLVKDGLVGSSGCN 180
                                                       GTLLVKDG+VG S  N
Sbjct: 121 VNKCNKMANPNSSNSDRNDQSSGGLKNGTNKLGNGKPKHHSSFGGTLLVKDGMVGPSASN 180

Query: 181 TGATRND----------PNAVTIAEPE-NAYYSQYLQGTEGSTSGQKDLAIENGCGF-GR 240
            GAT+++          PNAVTIAEP+ +AYYSQYLQGTEGS SGQKDL +ENGCGF GR
Sbjct: 181 AGATQSENHPQARLGNYPNAVTIAEPDGDAYYSQYLQGTEGSASGQKDLGMENGCGFNGR 240

Query: 241 RDVSFSSEPEESLRAILTDPVTGALMDDAMILPCGHSFGSGGIQHVLRVKSCYSCSQSVS 300
           RD S SSEP ESLR IL DPVTGALMDDAMILPCGHSFGSGGIQHVLRVKSCYSCSQSVS
Sbjct: 241 RDASISSEPGESLRTILADPVTGALMDDAMILPCGHSFGSGGIQHVLRVKSCYSCSQSVS 300

Query: 301 EDSIAQNLSLQAAVQAFRREEELLFYRSPKRRRERFEQDKGGYGDSTLMDTPRGRGVQFP 302
           EDSIAQNLSLQAAVQAFRREEE+LFYRSPKRRRERFEQDKGGYGD TLMDTPRGRGVQFP
Sbjct: 301 EDSIAQNLSLQAAVQAFRREEEILFYRSPKRRRERFEQDKGGYGDLTLMDTPRGRGVQFP 360

[Close]

BLAST of Cp4.1LG01g07240 vs. ExPASy TrEMBL
Match: A0A6J1FV24 (U-box domain-containing protein 62 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111447538 PE=4 SV=1)

HSP 1 Score: 551 bits (1421), Expect = 1.79e-195
Identity = 302/426 (70.89%), Postives = 302/426 (70.89%), Query Frame = 0


Query: 1   MSSEDMNGLNSHLVFQEDAMPFNCATTSQRRVADPAPKTRELCG---------------- 60
           MSSEDMNGLNSHLVFQEDAMPFNCATTSQRRVADPAPKTRELCG                
Sbjct: 1   MSSEDMNGLNSHLVFQEDAMPFNCATTSQRRVADPAPKTRELCGFMDDKLLPVDRDRFFV 60

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 61  HQGEDFRRSVFGHSRNWNGNESARTGSGKGSDEEDDDDEDDDDEDEVDDGDDDVVVEGLA 120

Query: 121 ------------------------------------------------GTLLVKDGLVGS 180
                                                           GTLLVKDGLVGS
Sbjct: 121 SLDDVNKCTKTANPNITNKDISDQSSDGLKNGTNKLGNGKLKHHSSFGGTLLVKDGLVGS 180

Query: 181 SGCNTGATRNDPNAVTIAEPENAYYSQYLQGTEGSTSGQKDLAIENGCGFGRRDVSFSSE 240
           SGCNTGATRNDPNAVTIAEPENAYYSQYLQGTEGSTSGQKDLAIENGCGFGRRDVSFSSE
Sbjct: 181 SGCNTGATRNDPNAVTIAEPENAYYSQYLQGTEGSTSGQKDLAIENGCGFGRRDVSFSSE 240

Query: 241 PEESLRAILTDPVTGALMDDAMILPCGHSFGSGGIQHVLRVKSCYSCSQSVSEDSIAQNL 300
           PEESLRAILTDPVTGALMDDAMILPCGHSFGSGGIQHVLRVKSCYSCSQSVSEDSIAQNL
Sbjct: 241 PEESLRAILTDPVTGALMDDAMILPCGHSFGSGGIQHVLRVKSCYSCSQSVSEDSIAQNL 300

Query: 301 SLQAAVQAFRREEELLFYRSPKRRRERFEQDKGGYGDSTLMDTPRGRGVQFPFAVTDRVI 302
           SLQAAVQAFRREEELLFYRSPKRRRERFEQDKGGYGDSTLMDTPRGRGVQFPFAVTDRVI
Sbjct: 301 SLQAAVQAFRREEELLFYRSPKRRRERFEQDKGGYGDSTLMDTPRGRGVQFPFAVTDRVI 360

[Close]

BLAST of Cp4.1LG01g07240 vs. ExPASy TrEMBL
Match: A0A6J1JA32 (U-box domain-containing protein 62-like OS=Cucurbita maxima OX=3661 GN=LOC111482631 PE=4 SV=1)

HSP 1 Score: 542 bits (1397), Expect = 1.07e-191
Identity = 298/434 (68.66%), Postives = 299/434 (68.89%), Query Frame = 0


Query: 1   MSSEDMNGLNSHLVFQEDAMPFNCATTSQRRVADPAPKTRELCG---------------- 60
           MSSEDMNGLNSHLVFQEDAMPFNCATTSQRRVADPAPKTRELCG                
Sbjct: 1   MSSEDMNGLNSHLVFQEDAMPFNCATTSQRRVADPAPKTRELCGFMDDKLLPVDRDRFFA 60

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 61  HQVEDFRRSVFGHSRNWNGNKSARTGSGKGSDEEDDDDEDDDGEDEVDDGEDEVDDGDDD 120

Query: 121 --------------------------------------------------------GTLL 180
                                                                   GTLL
Sbjct: 121 DVVVEGLASLDDVNKCTKTANPNNTNKDISDQSSDGLKNETNKLGNGKLKHHSSFGGTLL 180

Query: 181 VKDGLVGSSGCNTGATRNDPNAVTIAEPENAYYSQYLQGTEGSTSGQKDLAIENGCGFGR 240
           +KDGLVGSSGCNTGATRNDPNAVTIAEPENAYYSQYLQGTEGSTSGQKDLAIENGCGFGR
Sbjct: 181 IKDGLVGSSGCNTGATRNDPNAVTIAEPENAYYSQYLQGTEGSTSGQKDLAIENGCGFGR 240

Query: 241 RDVSFSSEPEESLRAILTDPVTGALMDDAMILPCGHSFGSGGIQHVLRVKSCYSCSQSVS 300
           RDVS SSEPEESLRAILTDPVTG LMDDAMILPCGHSFGSGGIQHVLRVKSCYSCSQSVS
Sbjct: 241 RDVSLSSEPEESLRAILTDPVTGVLMDDAMILPCGHSFGSGGIQHVLRVKSCYSCSQSVS 300

Query: 301 EDSIAQNLSLQAAVQAFRREEELLFYRSPKRRRERFEQDKGGYGDSTLMDTPRGRGVQFP 302
           EDSIAQNLSLQAAVQAF REEELLFYRSPKRRRERFEQDKGGYGDSTLMDTPRGRGVQFP
Sbjct: 301 EDSIAQNLSLQAAVQAFHREEELLFYRSPKRRRERFEQDKGGYGDSTLMDTPRGRGVQFP 360

[Close]

BLAST of Cp4.1LG01g07240 vs. ExPASy TrEMBL
Match: A0A6J1FRL1 (U-box domain-containing protein 62 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111447538 PE=4 SV=1)

HSP 1 Score: 478 bits (1229), Expect = 2.40e-166
Identity = 263/389 (67.61%), Postives = 265/389 (68.12%), Query Frame = 0


Query: 1   MSSEDMNGLNSHLVFQEDAMPFNCATTSQRRVADPAPKTRELCG---------------- 60
           MSSEDMNGLNSHLVFQEDAMPFNCATTSQRRVADPAPKTRELCG                
Sbjct: 1   MSSEDMNGLNSHLVFQEDAMPFNCATTSQRRVADPAPKTRELCGFMDDKLLPVDRDRFFV 60

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 61  HQGEDFRRSVFGHSRNWNGNESARTGSGKGSDEEDDDDEDDDDEDEVDDGDDDVVVEGLA 120

Query: 121 ------------------------------------------------GTLLVKDGLVGS 180
                                                           GTLLVKDGLVGS
Sbjct: 121 SLDDVNKCTKTANPNITNKDISDQSSDGLKNGTNKLGNGKLKHHSSFGGTLLVKDGLVGS 180

Query: 181 SGCNTGATRNDPNAVTIAEPENAYYSQYLQGTEGSTSGQKDLAIENGCGFGRRDVSFSSE 240
           SGCNTGATRNDPNAVTIAEPENAYYSQYLQGTEGSTSGQKDLAIENGCGFGRRDVSFSSE
Sbjct: 181 SGCNTGATRNDPNAVTIAEPENAYYSQYLQGTEGSTSGQKDLAIENGCGFGRRDVSFSSE 240

Query: 241 PEESLRAILTDPVTGALMDDAMILPCGHSFGSGGIQHVLRVKSCYSCSQSVSEDSIAQNL 265
           PEESLRAILTDPVTGALMDDAMILPCGHSFGSGGIQHVLRVKSCYSCSQSVSEDSIAQNL
Sbjct: 241 PEESLRAILTDPVTGALMDDAMILPCGHSFGSGGIQHVLRVKSCYSCSQSVSEDSIAQNL 300

[Close]

BLAST of Cp4.1LG01g07240 vs. ExPASy TrEMBL
Match: A0A6J1CYI7 (U-box domain-containing protein 62 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111015962 PE=4 SV=1)

HSP 1 Score: 472 bits (1215), Expect = 5.06e-164
Identity = 266/434 (61.29%), Postives = 280/434 (64.52%), Query Frame = 0


Query: 1   MSSEDMNGLNSHLVFQEDAMPFNCATTSQRRVADPAPKTRELCG---------------- 60
           MSSEDMNGL+S LVF ++AMPFNCA T QRRV DP PKTRELCG                
Sbjct: 1   MSSEDMNGLSSQLVFSDEAMPFNCANTPQRRVGDPGPKTRELCGFMDDKLFPVDRDRFFA 60

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 61  HQGADFRRSVFSDSRNWNGSARSGSGKGSEEEDDDDDDDDEENEVDDGDDDVEGLVSMDD 120

Query: 121 --------------------------------------------GTLLVKDGLVGSSGCN 180
                                                       GTLLVKDG+VG S  N
Sbjct: 121 VNKCNKMANPNSSNSDRNDQSSGGLKNGTNKLGNGKPKHHSSFGGTLLVKDGMVGPSASN 180

Query: 181 TGATRND----------PNAVTIAEPE-NAYYSQYLQGTEGSTSGQKDLAIENGCGF-GR 240
            GAT+++          PNAVTIAEP+ +AYYSQYLQGTEGS SGQKDL +ENGCGF GR
Sbjct: 181 AGATQSENHPQARLGNYPNAVTIAEPDGDAYYSQYLQGTEGSASGQKDLGMENGCGFNGR 240

Query: 241 RDVSFSSEPEESLRAILTDPVTGALMDDAMILPCGHSFGSGGIQHVLRVKSCYSCSQSVS 300
           RD S SSEP ESLR IL DPVTGALMDDAMILPCGHSFGSGGIQHVLRVKSCYSCSQSVS
Sbjct: 241 RDASISSEPGESLRTILADPVTGALMDDAMILPCGHSFGSGGIQHVLRVKSCYSCSQSVS 300

Query: 301 EDSIAQNLSLQAAVQAFRREEELLFYRSPKRRRERFEQDKGGYGDSTLMDTPRGRGVQFP 302
           EDSIAQNLSLQAAVQAFRREEE+LFYRSPKRRRERFEQDKGGYGD TLMDTPRGRGVQFP
Sbjct: 301 EDSIAQNLSLQAAVQAFRREEEILFYRSPKRRRERFEQDKGGYGDLTLMDTPRGRGVQFP 360

[Close]

BLAST of Cp4.1LG01g07240 vs. ExPASy TrEMBL
Match: A0A6J1CZA9 (U-box domain-containing protein 62 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111015962 PE=4 SV=1)

HSP 1 Score: 471 bits (1213), Expect = 1.09e-163
Identity = 266/436 (61.01%), Postives = 280/436 (64.22%), Query Frame = 0


Query: 1   MSSEDMNGLNSHLVFQEDAMPFNCATTSQRRVADPAPKTRELCG---------------- 60
           MSSEDMNGL+S LVF ++AMPFNCA T QRRV DP PKTRELCG                
Sbjct: 1   MSSEDMNGLSSQLVFSDEAMPFNCANTPQRRVGDPGPKTRELCGFMDDKLFPVDRDRFFA 60

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 61  HQGADFRRSVFSDSRNWNGNGSARSGSGKGSEEEDDDDDDDDEENEVDDGDDDVEGLVSM 120

Query: 121 ----------------------------------------------GTLLVKDGLVGSSG 180
                                                         GTLLVKDG+VG S 
Sbjct: 121 DDVNKCNKMANPNSSNSDRNDQSSGGLKNGTNKLGNGKPKHHSSFGGTLLVKDGMVGPSA 180

Query: 181 CNTGATRND----------PNAVTIAEPE-NAYYSQYLQGTEGSTSGQKDLAIENGCGF- 240
            N GAT+++          PNAVTIAEP+ +AYYSQYLQGTEGS SGQKDL +ENGCGF 
Sbjct: 181 SNAGATQSENHPQARLGNYPNAVTIAEPDGDAYYSQYLQGTEGSASGQKDLGMENGCGFN 240

Query: 241 GRRDVSFSSEPEESLRAILTDPVTGALMDDAMILPCGHSFGSGGIQHVLRVKSCYSCSQS 300
           GRRD S SSEP ESLR IL DPVTGALMDDAMILPCGHSFGSGGIQHVLRVKSCYSCSQS
Sbjct: 241 GRRDASISSEPGESLRTILADPVTGALMDDAMILPCGHSFGSGGIQHVLRVKSCYSCSQS 300

Query: 301 VSEDSIAQNLSLQAAVQAFRREEELLFYRSPKRRRERFEQDKGGYGDSTLMDTPRGRGVQ 302
           VSEDSIAQNLSLQAAVQAFRREEE+LFYRSPKRRRERFEQDKGGYGD TLMDTPRGRGVQ
Sbjct: 301 VSEDSIAQNLSLQAAVQAFRREEEILFYRSPKRRRERFEQDKGGYGDLTLMDTPRGRGVQ 360

[Close]

BLAST of Cp4.1LG01g07240 vs. TAIR 10
Match: AT5G05230.1 (RING/U-box superfamily protein )

HSP 1 Score: 264.6 bits (675), Expect = 9.6e-71
Identity = 143/260 (55.00%), Postives = 177/260 (68.08%), Query Frame = 0


Query: 51  DGLVGSSGCNTGATRNDPNA---VTIAEPENAYYSQYLQGTEG---STSGQKDLAIENGC 110
           DG  G  G N  A  +  +A   + + +   AYYSQ+ +  E    S + +  +A +NGC
Sbjct: 104 DGNEGDIGMNKDAGEDSVSAGAVIVVGQDNAAYYSQHFKTVEASFVSRNEESSIAADNGC 163

Query: 111 GF-GRRDVSFSSEPE-ESLRAILTDPVTGALMDDAMILPCGHSFGSGGIQHVLRVKSCYS 170
            F GRRD+S SS    ESLR IL+DP TG+LM DAMILPCGH+FG+GGI+ V ++K+C +
Sbjct: 164 DFSGRRDLSSSSSNSIESLRTILSDPTTGSLMADAMILPCGHTFGAGGIEQVKQMKACCT 223

Query: 171 CSQSVSEDSIAQNLSLQAAVQAFRREEELLFYRSPKRRRERFEQDKGGYGDSTLMDTPRG 230
           CSQ VSEDSI  NL+L+ AVQAF REE        KR+RE F+Q++  +G +      R 
Sbjct: 224 CSQPVSEDSITPNLTLRVAVQAFCREENSQSNHPSKRKREGFDQERRAFGVTNHSGRSRN 283

Query: 231 RGVQFPFAVTDRVIIKGNKRTPQRFVGREAVVTAQCLNGWYVVKTLDNAESVKLQYRSLA 290
           +   FPFAV DRVIIKGNKRTP RFVGREAVVT QCLNGWYVVKTLDNAESVKLQYRSLA
Sbjct: 284 KSNHFPFAVADRVIIKGNKRTPPRFVGREAVVTTQCLNGWYVVKTLDNAESVKLQYRSLA 343

Query: 291 RVPNDAASKTITKKVAPNWL 303
           + P D ++K    K+  NWL
Sbjct: 344 KAPEDPSAKATPNKMVSNWL 363

[Close]

BLAST of Cp4.1LG01g07240 vs. TAIR 10
Match: AT2G40640.1 (RING/U-box superfamily protein )

HSP 1 Score: 208.4 bits (529), Expect = 8.2e-54
Identity = 101/185 (54.59%), Postives = 142/185 (76.76%), Query Frame = 0


Query: 119 ESLRAILTDPVTGALMDDAMILPCGHSFGSGGIQHVLRVKSCYSCSQSVSEDSIAQNLSL 178
           ESL+AIL+DPVTGALM+DA ILPCGHSFG+GG++ V ++K+C++CSQ   E S   NLSL
Sbjct: 200 ESLKAILSDPVTGALMNDATILPCGHSFGAGGLKEVKKMKACFTCSQPTLEGSEKPNLSL 259

Query: 179 QAAVQAFRREEELLFYRSPKRRRERFEQDKGGYGDSTLMDTPR-GRGVQFPFAVTDRVII 238
           +  V AFR+EE+     + KRR+ER +Q K  +    + +TP+  RG+QFPF++ D +II
Sbjct: 260 RIVVHAFRQEEDSDHIHTLKRRKERSDQ-KRSFCIPNITETPKSSRGIQFPFSIGDHIII 319

Query: 239 KGNKRTPQRFVGREAVVTAQCLNGWYVVKTLDNAESVKLQYRSLARVPNDAASKTITKKV 298
           +GNKRTP RFVGR AV+  QCLNGWYVVKT+DN+ES+KLQ+ SLA++ +++++K    ++
Sbjct: 320 EGNKRTPPRFVGRIAVIMTQCLNGWYVVKTVDNSESIKLQHCSLAKISDNSSTKVTVAEM 379

Query: 299 APNWL 303
            P+WL
Sbjct: 380 PPSWL 383

[Close]

BLAST of Cp4.1LG01g07240 vs. TAIR 10
Match: AT2G40640.2 (RING/U-box superfamily protein )

HSP 1 Score: 165.2 bits (417), Expect = 7.9e-41
Identity = 82/145 (56.55%), Postives = 109/145 (75.17%), Query Frame = 0


Query: 119 ESLRAILTDPVTGALMDDAMILPCGHSFGSGGIQHVLRVKSCYSCSQSVSEDSIAQNLSL 178
           ESL+AIL+DPVTGALM+DA ILPCGHSFG+GG++ V ++K+C++CSQ   E S   NLSL
Sbjct: 200 ESLKAILSDPVTGALMNDATILPCGHSFGAGGLKEVKKMKACFTCSQPTLEGSEKPNLSL 259

Query: 179 QAAVQAFRREEELLFYRSPKRRRERFEQDKGGYGDSTLMDTPR-GRGVQFPFAVTDRVII 238
           +  V AFR+EE+     + KRR+ER +Q K  +    + +TP+  RG+QFPF++ D +II
Sbjct: 260 RIVVHAFRQEEDSDHIHTLKRRKERSDQ-KRSFCIPNITETPKSSRGIQFPFSIGDHIII 319

Query: 239 KGNKRTPQRFVGREAVVTAQCLNGW 263
           +GNKRTP RFVGR AV+  QCLNGW
Sbjct: 320 EGNKRTPPRFVGRIAVIMTQCLNGW 343

[Close]

BLAST of Cp4.1LG01g07240 vs. TAIR 10
Match: AT3G19895.1 (RING/U-box superfamily protein )

HSP 1 Score: 156.0 bits (393), Expect = 4.8e-38
Identity = 75/173 (43.35%), Postives = 121/173 (69.94%), Query Frame = 0


Query: 118 EESLRAILTDPVTGALMDDAMILPCGHSFGSGGIQHVLRVKSCYSCSQSVSEDSIAQNLS 177
           E SLR++L+DP++GA ++DAM++ CGHSFG   ++ VL +  C  C+  +   S+  N +
Sbjct: 367 EPSLRSVLSDPISGAFLEDAMVVSCGHSFGGLMLRRVLEMSRCTLCNTEIESGSLVPNHA 426

Query: 178 LQAAVQAFRREEE-LLFYRSPKRRRERFEQDKGGY--GDSTLMDTPRGRGVQFPFAVTDR 237
           L+AA  A +++++  LF+ +  RRR +   D+     GD    D    R V +PFAV ++
Sbjct: 427 LRAAASAIKQQDDKRLFHNAAMRRRRKEMSDQMDVENGDPA-TDDGMHRVVHYPFAVNEK 486

Query: 238 VIIKGNKRTPQRFVGREAVVTAQCLNGWYVVKTLDNAESVKLQYRSLARVPND 288
           V+IKGN+RTP++FVG+EA+VT+QCLNGWY++K +++ ++V+LQYRSL ++ ND
Sbjct: 487 VLIKGNRRTPEKFVGKEAIVTSQCLNGWYLLKIVESGDNVRLQYRSLKKMVND 538

[Close]

BLAST of Cp4.1LG01g07240 vs. TAIR 10
Match: AT2G40640.3 (RING/U-box superfamily protein )

HSP 1 Score: 102.1 bits (253), Expect = 8.3e-22
Identity = 51/87 (58.62%), Postives = 67/87 (77.01%), Query Frame = 0


Query: 119 ESLRAILTDPVTGALMDDAMILPCGHSFGSGGIQHVLRVKSCYSCSQSVSEDSIAQNLSL 178
           ESL+AIL+DPVTGALM+DA ILPCGHSFG+GG++ V ++K+C++CSQ   E S   NLSL
Sbjct: 200 ESLKAILSDPVTGALMNDATILPCGHSFGAGGLKEVKKMKACFTCSQPTLEGSEKPNLSL 259

Query: 179 QAAVQAFRREEELLFYRSPKRRRERFE 206
           +  V AFR+EE+     + KRR+ER E
Sbjct: 260 RIVVHAFRQEEDSDHIHTLKRRKERRE 286

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g07240 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6DBN5	1.4e-69	55.00	U-box domain-containing protein 62 OS=Arabidopsis thaliana OX=3702 GN=PUB62 PE=2...	[more]
Q58FY4	1.2e-52	54.59	U-box domain-containing protein 63 OS=Arabidopsis thaliana OX=3702 GN=PUB63 PE=2...	[more]

BLAST of Cp4.1LG01g07240 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023541871.1	3.70e-195	70.89	U-box domain-containing protein 62 [Cucurbita pepo subsp. pepo]	[more]
XP_022942528.1	3.70e-195	70.89	U-box domain-containing protein 62 isoform X1 [Cucurbita moschata] >KAG6600875.1...	[more]
XP_022984283.1	2.21e-191	68.66	U-box domain-containing protein 62-like [Cucurbita maxima]	[more]
XP_022942529.1	4.96e-166	67.61	U-box domain-containing protein 62 isoform X2 [Cucurbita moschata]	[more]
XP_022146865.1	1.04e-163	61.29	U-box domain-containing protein 62 isoform X2 [Momordica charantia]	[more]

BLAST of Cp4.1LG01g07240 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FV24	1.79e-195	70.89	U-box domain-containing protein 62 isoform X1 OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1JA32	1.07e-191	68.66	U-box domain-containing protein 62-like OS=Cucurbita maxima OX=3661 GN=LOC111482...	[more]
A0A6J1FRL1	2.40e-166	67.61	U-box domain-containing protein 62 isoform X2 OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1CYI7	5.06e-164	61.29	U-box domain-containing protein 62 isoform X2 OS=Momordica charantia OX=3673 GN=...	[more]
A0A6J1CZA9	1.09e-163	61.01	U-box domain-containing protein 62 isoform X1 OS=Momordica charantia OX=3673 GN=...	[more]

BLAST of Cp4.1LG01g07240 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G05230.1	9.6e-71	55.00	RING/U-box superfamily protein	[more]
AT2G40640.1	8.2e-54	54.59	RING/U-box superfamily protein	[more]
AT2G40640.2	7.9e-41	56.55	RING/U-box superfamily protein	[more]
AT3G19895.1	4.8e-38	43.35	RING/U-box superfamily protein	[more]
AT2G40640.3	8.3e-22	58.62	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 119..191 e-value: 5.8E-10 score: 40.9
None	No IPR available	PANTHER	PTHR33644:SF5	U-BOX DOMAIN-CONTAINING PROTEIN 62	coord: 60..302
None	No IPR available	PANTHER	PTHR33644	U-BOX DOMAIN-CONTAINING PROTEIN 62-RELATED	coord: 60..302
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 115..193
IPR003613	U box domain	PROSITE	PS51698	U_BOX	coord: 120..192 score: 9.555122

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g07240.1	Cp4.1LG01g07240.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
molecular_function	GO:0004842	ubiquitin-protein transferase activity