Cp4.1LG01g06650 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG01g06650
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	DUF4228 domain-containing protein
Location	Cp4.1LG01: 4084488 .. 4085144 (-)
RNA-Seq Expression	Cp4.1LG01g06650
Synteny	Cp4.1LG01g06650

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTAATTGTTTGTTTGGCGGAAGGTCGGGGGAGATTCAGGGCAAAATCAAAGTTATCACATCCAACGGCGGGATTATGGAGTTGGGTTCTCCGATCACCGTCGGATGCATCGCCGATGAGTTTCCCGGCTACGGAATATTCAAAAGCCACGACCTTTTCTGGAACCCACTGCCGCACGATGAGGAGCTTCTGACGGGAAAATCGTATTATTTGCTTCCGAGAAACAGGGGAGAGGGGGAGATGGGGATGATAAGAGCGCGGGAGGGGCACGTGAGGTCAAACAGCGTGCCGGAAGAGACGGCGGCGGTTGCGATGGCACCGTACAGGATGTCGTTCGATTACCAGGGGGCATTGAGGAGGTCGCAGACGGAAGTGTTTTCGAGGTGCAGTGAGAAGAACGGTGGGGTTTGGAAGGTGAAATTGGTGATTAGTCCGAAGCGGTTGGTGGAGATATTGGAGGAGGAAGGGCACACTCAAGAATTGATAGAGAATGTTAGAACTGTGGCTAAATGTGGAAGCACGAGCACAAGCACAAGCACAAGCAGCAGTTTCTCGTCGTCAATGGCGTTTTCAGATCAATGGAGTTTGTCGACCACCACCGCCAATGCGACTCCAACTGCTTCTTCTAAAAGTGGCGGCTTTCTGGAGTTGTAA

mRNA sequence

ATGGGTAATTGTTTGTTTGGCGGAAGGTCGGGGGAGATTCAGGGCAAAATCAAAGTTATCACATCCAACGGCGGGATTATGGAGTTGGGTTCTCCGATCACCGTCGGATGCATCGCCGATGAGTTTCCCGGCTACGGAATATTCAAAAGCCACGACCTTTTCTGGAACCCACTGCCGCACGATGAGGAGCTTCTGACGGGAAAATCGTATTATTTGCTTCCGAGAAACAGGGGAGAGGGGGAGATGGGGATGATAAGAGCGCGGGAGGGGCACGTGAGGTCAAACAGCGTGCCGGAAGAGACGGCGGCGGTTGCGATGGCACCGTACAGGATGTCGTTCGATTACCAGGGGGCATTGAGGAGGTCGCAGACGGAAGTGTTTTCGAGGTGCAGTGAGAAGAACGGTGGGGTTTGGAAGGTGAAATTGGTGATTAGTCCGAAGCGGTTGGTGGAGATATTGGAGGAGGAAGGGCACACTCAAGAATTGATAGAGAATGTTAGAACTGTGGCTAAATGTGGAAGCACGAGCACAAGCACAAGCACAAGCAGCAGTTTCTCGTCGTCAATGGCGTTTTCAGATCAATGGAGTTTGTCGACCACCACCGCCAATGCGACTCCAACTGCTTCTTCTAAAAGTGGCGGCTTTCTGGAGTTGTAA

Coding sequence (CDS)

ATGGGTAATTGTTTGTTTGGCGGAAGGTCGGGGGAGATTCAGGGCAAAATCAAAGTTATCACATCCAACGGCGGGATTATGGAGTTGGGTTCTCCGATCACCGTCGGATGCATCGCCGATGAGTTTCCCGGCTACGGAATATTCAAAAGCCACGACCTTTTCTGGAACCCACTGCCGCACGATGAGGAGCTTCTGACGGGAAAATCGTATTATTTGCTTCCGAGAAACAGGGGAGAGGGGGAGATGGGGATGATAAGAGCGCGGGAGGGGCACGTGAGGTCAAACAGCGTGCCGGAAGAGACGGCGGCGGTTGCGATGGCACCGTACAGGATGTCGTTCGATTACCAGGGGGCATTGAGGAGGTCGCAGACGGAAGTGTTTTCGAGGTGCAGTGAGAAGAACGGTGGGGTTTGGAAGGTGAAATTGGTGATTAGTCCGAAGCGGTTGGTGGAGATATTGGAGGAGGAAGGGCACACTCAAGAATTGATAGAGAATGTTAGAACTGTGGCTAAATGTGGAAGCACGAGCACAAGCACAAGCACAAGCAGCAGTTTCTCGTCGTCAATGGCGTTTTCAGATCAATGGAGTTTGTCGACCACCACCGCCAATGCGACTCCAACTGCTTCTTCTAAAAGTGGCGGCTTTCTGGAGTTGTAA

Protein sequence

MGNCLFGGRSGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLFWNPLPHDEELLTGKSYYLLPRNRGEGEMGMIRAREGHVRSNSVPEETAAVAMAPYRMSFDYQGALRRSQTEVFSRCSEKNGGVWKVKLVISPKRLVEILEEEGHTQELIENVRTVAKCGSTSTSTSTSSSFSSSMAFSDQWSLSTTTANATPTASSKSGGFLEL

Homology

[Close]

BLAST of Cp4.1LG01g06650 vs. NCBI nr
Match: XP_022942635.1 (uncharacterized protein LOC111447612 [Cucurbita moschata] >XP_023549744.1 uncharacterized protein LOC111808155 [Cucurbita pepo subsp. pepo] >KAG6600569.1 hypothetical protein SDJN03_05802, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031208.1 hypothetical protein SDJN02_05248, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 428 bits (1101), Expect = 3.80e-151
Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 0


Query: 1   MGNCLFGGRSGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLFWNPLPH 60
           MGNCLFGGRSGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLFWNPLPH
Sbjct: 1   MGNCLFGGRSGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLFWNPLPH 60

Query: 61  DEELLTGKSYYLLPRNRGEGEMGMIRAREGHVRSNSVPEETAAVAMAPYRMSFDYQGALR 120
           DEELLTGKSYYLLPRNRGEGEMGMIRAREGHVRSNSVPEETAAVAMAPYRMSFDYQGALR
Sbjct: 61  DEELLTGKSYYLLPRNRGEGEMGMIRAREGHVRSNSVPEETAAVAMAPYRMSFDYQGALR 120

Query: 121 RSQTEVFSRCSEKNGGVWKVKLVISPKRLVEILEEEGHTQELIENVRTVAKCGSTSTSTS 180
           RSQTEVFSRCSEKNGGVWKVKLVISPKRLVEILEEEGHTQELIENVRTVAKCGSTSTSTS
Sbjct: 121 RSQTEVFSRCSEKNGGVWKVKLVISPKRLVEILEEEGHTQELIENVRTVAKCGSTSTSTS 180

Query: 181 TSSSFSSSMAFSDQWSLSTTTANATPTASSKSGGFLEL 218
           TSSSFSSSMAFSDQWSLSTTTANATPTASSKSGGFLEL
Sbjct: 181 TSSSFSSSMAFSDQWSLSTTTANATPTASSKSGGFLEL 218

[Close]

BLAST of Cp4.1LG01g06650 vs. NCBI nr
Match: XP_022982653.1 (uncharacterized protein LOC111481463 [Cucurbita maxima])

HSP 1 Score: 428 bits (1100), Expect = 5.40e-151
Identity = 217/218 (99.54%), Postives = 218/218 (100.00%), Query Frame = 0


Query: 1   MGNCLFGGRSGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLFWNPLPH 60
           MGNCLFGGRSGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLFWNPLPH
Sbjct: 1   MGNCLFGGRSGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLFWNPLPH 60

Query: 61  DEELLTGKSYYLLPRNRGEGEMGMIRAREGHVRSNSVPEETAAVAMAPYRMSFDYQGALR 120
           DEELLTGKSYYLLPRNRGEGEMGMIRAREGHVRSNSVPEETAA+AMAPYRMSFDYQGALR
Sbjct: 61  DEELLTGKSYYLLPRNRGEGEMGMIRAREGHVRSNSVPEETAAIAMAPYRMSFDYQGALR 120

Query: 121 RSQTEVFSRCSEKNGGVWKVKLVISPKRLVEILEEEGHTQELIENVRTVAKCGSTSTSTS 180
           RSQTEVFSRCSEKNGGVWKVKLVISPKRLVEILEEEGHTQELIENVRTVAKCGSTSTSTS
Sbjct: 121 RSQTEVFSRCSEKNGGVWKVKLVISPKRLVEILEEEGHTQELIENVRTVAKCGSTSTSTS 180

Query: 181 TSSSFSSSMAFSDQWSLSTTTANATPTASSKSGGFLEL 218
           TSSSFSSSMAFSDQWSLSTTTANATPTASSKSGGFLEL
Sbjct: 181 TSSSFSSSMAFSDQWSLSTTTANATPTASSKSGGFLEL 218

[Close]

BLAST of Cp4.1LG01g06650 vs. NCBI nr
Match: XP_038902281.1 (uncharacterized protein LOC120088913 [Benincasa hispida])

HSP 1 Score: 388 bits (996), Expect = 4.30e-135
Identity = 202/225 (89.78%), Postives = 207/225 (92.00%), Query Frame = 0


Query: 1   MGNCLFGGRSGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLFWNPLPH 60
           MGNCLFGG SGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLFWNPLPH
Sbjct: 1   MGNCLFGGGSGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLFWNPLPH 60

Query: 61  DEELLTGKSYYLLPRNRG-------EGEMGMIRAREGHVRSNSVPEETAAVAMAPYRMSF 120
           +EELL GKSYYLLPRNRG       EGEMG+IRAREGHVRSNSVPE  AA AMAPYRMSF
Sbjct: 61  NEELLPGKSYYLLPRNRGRNRGEEEEGEMGIIRAREGHVRSNSVPEAAAAAAMAPYRMSF 120

Query: 121 DYQGALRRSQTEVFSRCSEKNGGVWKVKLVISPKRLVEILEEEGHTQELIENVRTVAKCG 180
           DYQG LRRSQTEVFSRCSEKNGGVWKVKLVISPKRLVEILEEEGHTQELIE+VRTVAKCG
Sbjct: 121 DYQGVLRRSQTEVFSRCSEKNGGVWKVKLVISPKRLVEILEEEGHTQELIESVRTVAKCG 180

Query: 181 STSTSTSTSSSFSSSMAFSDQWSLSTTTANATPTASSKSGGFLEL 218
           STSTS    SSFSSSMAFSDQWSLSTTTANATP+ASSKSGG LE+
Sbjct: 181 STSTS----SSFSSSMAFSDQWSLSTTTANATPSASSKSGGLLEI 221

[Close]

BLAST of Cp4.1LG01g06650 vs. NCBI nr
Match: XP_022985129.1 (uncharacterized protein LOC111483212 [Cucurbita maxima])

HSP 1 Score: 372 bits (955), Expect = 7.88e-129
Identity = 198/226 (87.61%), Postives = 204/226 (90.27%), Query Frame = 0


Query: 1   MGNCLFGGRSGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLFWNPLPH 60
           MGNCLFGG SGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLFWNPLPH
Sbjct: 1   MGNCLFGGGSGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLFWNPLPH 60

Query: 61  DEELLTGKSYYLLPRNRG-------EGEMGMIRAREGHVRSNSVPEETAAVA-MAPYRMS 120
           +EELL GKSYYLL RNRG       EGEMGMIRAREGHVRSNSVPE TAA A MA YRMS
Sbjct: 61  NEELLPGKSYYLLQRNRGRNRGETEEGEMGMIRAREGHVRSNSVPEATAAAAGMASYRMS 120

Query: 121 FDYQGALRRSQTEVFSRCSEKNGGVWKVKLVISPKRLVEILEEEGHTQELIENVRTVAKC 180
           FDYQG LRRSQTEVFSR SEKNGGVWKVKLVISPKRLVEILEEEGHTQELIE+VRTVAKC
Sbjct: 121 FDYQGVLRRSQTEVFSRSSEKNGGVWKVKLVISPKRLVEILEEEGHTQELIESVRTVAKC 180

Query: 181 GSTSTSTSTSSSFSSSMAFSDQWSLSTTTANATPTASSKSGGFLEL 218
           GSTSTS    SSFSSSMAFSD WSLS+TTANATP+AS+KSGG LE+
Sbjct: 181 GSTSTS----SSFSSSMAFSDHWSLSSTTANATPSASAKSGGLLEI 222

[Close]

BLAST of Cp4.1LG01g06650 vs. NCBI nr
Match: XP_008452047.1 (PREDICTED: uncharacterized protein LOC103493172 [Cucumis melo] >TYK16646.1 DUF4228 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 371 bits (953), Expect = 1.59e-128
Identity = 195/226 (86.28%), Postives = 203/226 (89.82%), Query Frame = 0


Query: 1   MGNCLFGGRSGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLFWNPLPH 60
           MGNCLF G +GEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLFWNPLPH
Sbjct: 1   MGNCLFAGGAGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLFWNPLPH 60

Query: 61  DEELLTGKSYYLLPRNRGEG-------EMGMIRAREGHVRSNSVPEETAAVA-MAPYRMS 120
           +EELL GKSYYLLPRNRG         EMG+IRAREGHVRSNSVPE  AA+A MAPYRMS
Sbjct: 61  NEELLPGKSYYLLPRNRGRNRGGEDGEEMGIIRAREGHVRSNSVPEAAAAMAAMAPYRMS 120

Query: 121 FDYQGALRRSQTEVFSRCSEKNGGVWKVKLVISPKRLVEILEEEGHTQELIENVRTVAKC 180
           FDYQG LRRSQTEVFSRCSEKNGGVWKVKLVISP+RLVEILEEEGHTQELIE+VRTVAKC
Sbjct: 121 FDYQGVLRRSQTEVFSRCSEKNGGVWKVKLVISPRRLVEILEEEGHTQELIESVRTVAKC 180

Query: 181 GSTSTSTSTSSSFSSSMAFSDQWSLSTTTANATPTASSKSGGFLEL 218
           GSTSTS    SSFSSSMAFSDQWSLST TANATP+ SSKSGG LE+
Sbjct: 181 GSTSTS----SSFSSSMAFSDQWSLSTATANATPSVSSKSGGLLEI 222

[Close]

BLAST of Cp4.1LG01g06650 vs. ExPASy TrEMBL
Match: A0A6J1FWN5 (uncharacterized protein LOC111447612 OS=Cucurbita moschata OX=3662 GN=LOC111447612 PE=4 SV=1)

HSP 1 Score: 428 bits (1101), Expect = 1.84e-151
Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 0


Query: 1   MGNCLFGGRSGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLFWNPLPH 60
           MGNCLFGGRSGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLFWNPLPH
Sbjct: 1   MGNCLFGGRSGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLFWNPLPH 60

Query: 61  DEELLTGKSYYLLPRNRGEGEMGMIRAREGHVRSNSVPEETAAVAMAPYRMSFDYQGALR 120
           DEELLTGKSYYLLPRNRGEGEMGMIRAREGHVRSNSVPEETAAVAMAPYRMSFDYQGALR
Sbjct: 61  DEELLTGKSYYLLPRNRGEGEMGMIRAREGHVRSNSVPEETAAVAMAPYRMSFDYQGALR 120

Query: 121 RSQTEVFSRCSEKNGGVWKVKLVISPKRLVEILEEEGHTQELIENVRTVAKCGSTSTSTS 180
           RSQTEVFSRCSEKNGGVWKVKLVISPKRLVEILEEEGHTQELIENVRTVAKCGSTSTSTS
Sbjct: 121 RSQTEVFSRCSEKNGGVWKVKLVISPKRLVEILEEEGHTQELIENVRTVAKCGSTSTSTS 180

Query: 181 TSSSFSSSMAFSDQWSLSTTTANATPTASSKSGGFLEL 218
           TSSSFSSSMAFSDQWSLSTTTANATPTASSKSGGFLEL
Sbjct: 181 TSSSFSSSMAFSDQWSLSTTTANATPTASSKSGGFLEL 218

[Close]

BLAST of Cp4.1LG01g06650 vs. ExPASy TrEMBL
Match: A0A6J1J5E2 (uncharacterized protein LOC111481463 OS=Cucurbita maxima OX=3661 GN=LOC111481463 PE=4 SV=1)

HSP 1 Score: 428 bits (1100), Expect = 2.61e-151
Identity = 217/218 (99.54%), Postives = 218/218 (100.00%), Query Frame = 0


Query: 1   MGNCLFGGRSGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLFWNPLPH 60
           MGNCLFGGRSGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLFWNPLPH
Sbjct: 1   MGNCLFGGRSGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLFWNPLPH 60

Query: 61  DEELLTGKSYYLLPRNRGEGEMGMIRAREGHVRSNSVPEETAAVAMAPYRMSFDYQGALR 120
           DEELLTGKSYYLLPRNRGEGEMGMIRAREGHVRSNSVPEETAA+AMAPYRMSFDYQGALR
Sbjct: 61  DEELLTGKSYYLLPRNRGEGEMGMIRAREGHVRSNSVPEETAAIAMAPYRMSFDYQGALR 120

Query: 121 RSQTEVFSRCSEKNGGVWKVKLVISPKRLVEILEEEGHTQELIENVRTVAKCGSTSTSTS 180
           RSQTEVFSRCSEKNGGVWKVKLVISPKRLVEILEEEGHTQELIENVRTVAKCGSTSTSTS
Sbjct: 121 RSQTEVFSRCSEKNGGVWKVKLVISPKRLVEILEEEGHTQELIENVRTVAKCGSTSTSTS 180

Query: 181 TSSSFSSSMAFSDQWSLSTTTANATPTASSKSGGFLEL 218
           TSSSFSSSMAFSDQWSLSTTTANATPTASSKSGGFLEL
Sbjct: 181 TSSSFSSSMAFSDQWSLSTTTANATPTASSKSGGFLEL 218

[Close]

BLAST of Cp4.1LG01g06650 vs. ExPASy TrEMBL
Match: A0A6J1JCF7 (uncharacterized protein LOC111483212 OS=Cucurbita maxima OX=3661 GN=LOC111483212 PE=4 SV=1)

HSP 1 Score: 372 bits (955), Expect = 3.82e-129
Identity = 198/226 (87.61%), Postives = 204/226 (90.27%), Query Frame = 0


Query: 1   MGNCLFGGRSGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLFWNPLPH 60
           MGNCLFGG SGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLFWNPLPH
Sbjct: 1   MGNCLFGGGSGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLFWNPLPH 60

Query: 61  DEELLTGKSYYLLPRNRG-------EGEMGMIRAREGHVRSNSVPEETAAVA-MAPYRMS 120
           +EELL GKSYYLL RNRG       EGEMGMIRAREGHVRSNSVPE TAA A MA YRMS
Sbjct: 61  NEELLPGKSYYLLQRNRGRNRGETEEGEMGMIRAREGHVRSNSVPEATAAAAGMASYRMS 120

Query: 121 FDYQGALRRSQTEVFSRCSEKNGGVWKVKLVISPKRLVEILEEEGHTQELIENVRTVAKC 180
           FDYQG LRRSQTEVFSR SEKNGGVWKVKLVISPKRLVEILEEEGHTQELIE+VRTVAKC
Sbjct: 121 FDYQGVLRRSQTEVFSRSSEKNGGVWKVKLVISPKRLVEILEEEGHTQELIESVRTVAKC 180

Query: 181 GSTSTSTSTSSSFSSSMAFSDQWSLSTTTANATPTASSKSGGFLEL 218
           GSTSTS    SSFSSSMAFSD WSLS+TTANATP+AS+KSGG LE+
Sbjct: 181 GSTSTS----SSFSSSMAFSDHWSLSSTTANATPSASAKSGGLLEI 222

[Close]

BLAST of Cp4.1LG01g06650 vs. ExPASy TrEMBL
Match: A0A5A7TPJ8 (DUF4228 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G001090 PE=4 SV=1)

HSP 1 Score: 371 bits (953), Expect = 7.70e-129
Identity = 195/226 (86.28%), Postives = 203/226 (89.82%), Query Frame = 0


Query: 1   MGNCLFGGRSGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLFWNPLPH 60
           MGNCLF G +GEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLFWNPLPH
Sbjct: 1   MGNCLFAGGAGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLFWNPLPH 60

Query: 61  DEELLTGKSYYLLPRNRGEG-------EMGMIRAREGHVRSNSVPEETAAVA-MAPYRMS 120
           +EELL GKSYYLLPRNRG         EMG+IRAREGHVRSNSVPE  AA+A MAPYRMS
Sbjct: 61  NEELLPGKSYYLLPRNRGRNRGGGDGEEMGIIRAREGHVRSNSVPEAAAAMAAMAPYRMS 120

Query: 121 FDYQGALRRSQTEVFSRCSEKNGGVWKVKLVISPKRLVEILEEEGHTQELIENVRTVAKC 180
           FDYQG LRRSQTEVFSRCSEKNGGVWKVKLVISP+RLVEILEEEGHTQELIE+VRTVAKC
Sbjct: 121 FDYQGVLRRSQTEVFSRCSEKNGGVWKVKLVISPRRLVEILEEEGHTQELIESVRTVAKC 180

Query: 181 GSTSTSTSTSSSFSSSMAFSDQWSLSTTTANATPTASSKSGGFLEL 218
           GSTSTS    SSFSSSMAFSDQWSLST TANATP+ SSKSGG LE+
Sbjct: 181 GSTSTS----SSFSSSMAFSDQWSLSTATANATPSVSSKSGGLLEI 222

[Close]

BLAST of Cp4.1LG01g06650 vs. ExPASy TrEMBL
Match: A0A5D3D1S5 (DUF4228 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G004760 PE=4 SV=1)

HSP 1 Score: 371 bits (953), Expect = 7.70e-129
Identity = 195/226 (86.28%), Postives = 203/226 (89.82%), Query Frame = 0


Query: 1   MGNCLFGGRSGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLFWNPLPH 60
           MGNCLF G +GEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLFWNPLPH
Sbjct: 1   MGNCLFAGGAGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLFWNPLPH 60

Query: 61  DEELLTGKSYYLLPRNRGEG-------EMGMIRAREGHVRSNSVPEETAAVA-MAPYRMS 120
           +EELL GKSYYLLPRNRG         EMG+IRAREGHVRSNSVPE  AA+A MAPYRMS
Sbjct: 61  NEELLPGKSYYLLPRNRGRNRGGEDGEEMGIIRAREGHVRSNSVPEAAAAMAAMAPYRMS 120

Query: 121 FDYQGALRRSQTEVFSRCSEKNGGVWKVKLVISPKRLVEILEEEGHTQELIENVRTVAKC 180
           FDYQG LRRSQTEVFSRCSEKNGGVWKVKLVISP+RLVEILEEEGHTQELIE+VRTVAKC
Sbjct: 121 FDYQGVLRRSQTEVFSRCSEKNGGVWKVKLVISPRRLVEILEEEGHTQELIESVRTVAKC 180

Query: 181 GSTSTSTSTSSSFSSSMAFSDQWSLSTTTANATPTASSKSGGFLEL 218
           GSTSTS    SSFSSSMAFSDQWSLST TANATP+ SSKSGG LE+
Sbjct: 181 GSTSTS----SSFSSSMAFSDQWSLSTATANATPSVSSKSGGLLEI 222

[Close]

BLAST of Cp4.1LG01g06650 vs. TAIR 10
Match: AT1G64700.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G61920.1); Has 48 Blast hits to 47 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 142.9 bits (359), Expect = 3.0e-34
Identity = 91/201 (45.27%), Postives = 118/201 (58.71%), Query Frame = 0


Query: 1   MGNCLFGGRSGEIQG-KIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLFWNPLP 60
           MGNCLFGG   E +   IKVI S+GG++E  SP+T G ++  F G+ +F + DL W PL 
Sbjct: 1   MGNCLFGGLGDEEEDLLIKVIKSDGGVLEFYSPVTAGFVSHGFSGHALFSAVDLLWKPLA 60

Query: 61  HDEELLTGKSYYLLPRNRGEGEMGMIRAREGHVRSNSVPEETAAVAMAPYRMSFDY-QGA 120
           HD  L+ G+SYYL P N    E+        HVRSNS     +  A+ PYRMS DY    
Sbjct: 61  HDHLLVPGQSYYLFP-NIVSDELKTF-VGSCHVRSNS----ESLSAITPYRMSLDYNHRV 120

Query: 121 LRRSQTEVFSRCS----------------EKNGGVWKVKLVISPKRLVEILEEEGHTQEL 180
           L+RS T+VFSR S                   G +WKV L+I+ + L++IL E+G T EL
Sbjct: 121 LKRSYTDVFSRNSHIRTRQKEKKTRRRRTSSKGAIWKVNLIINTEELLQILSEDGRTNEL 180

Query: 181 IENVRTVAKCGSTSTSTSTSS 184
           IE+VR VAK G TS+ TS+SS
Sbjct: 181 IESVRAVAK-GETSSITSSSS 194

[Close]

BLAST of Cp4.1LG01g06650 vs. TAIR 10
Match: AT3G61920.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot, hypocotyl, root, egg cell; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G64700.1); Has 77 Blast hits to 77 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 77; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 110.2 bits (274), Expect = 2.2e-24
Identity = 79/208 (37.98%), Postives = 105/208 (50.48%), Query Frame = 0


Query: 1   MGNCLFGGRSG------EIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLF 60
           MGNC+F G  G      +    IKV+T NGG+MEL  PI    I +EFPG+ I  S  L 
Sbjct: 1   MGNCVFKGNGGSRKLYDKDDSLIKVVTPNGGVMELHPPIFAEFITNEFPGHVIHDSLSLR 60

Query: 61  WN--PLPHDEELLTGKSYYLLPRNRGEGEMGMIRAREGHVRSNSVPEETAAVAMAPYRMS 120
            +  PL H EEL  G  YYLLP +        +              +++     PYRMS
Sbjct: 61  HSSPPLLHGEELFPGNIYYLLPLSSSAAATAQL--------------DSSDQLSTPYRMS 120

Query: 121 FDYQGALRRSQTEVFSRCSEKNGGVWKVKLVISPKRLVEILEEEGHTQELIENVRTVAKC 180
           F         +T + +  S    GVWKV+LVISP++L EIL E+  T+ L+E+VRTVAKC
Sbjct: 121 F--------GKTPIMAALSGGGCGVWKVRLVISPEQLAEILAEDVETEALVESVRTVAKC 180

Query: 181 GSTSTSTSTSSSFSSSMAFSDQWSLSTT 201
           G              S A SDQ S++++
Sbjct: 181 GGYGCGGGV-----HSRANSDQLSVTSS 181

[Close]

BLAST of Cp4.1LG01g06650 vs. TAIR 10
Match: AT5G03890.1 (unknown protein; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G10120.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 44.3 bits (103), Expect = 1.5e-04
Identity = 35/111 (31.53%), Postives = 51/111 (45.95%), Query Frame = 0


Query: 1   MGNCLFGGRSGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLFWNPLPH 60
           MGNCL   +       IK++  +G ++E   PI+V  I  +F G+ I  SH+     L  
Sbjct: 1   MGNCLVMEKK-----VIKIVRDDGKVLEYREPISVHHILTQFSGHSI--SHNN--THLLP 60

Query: 61  DEELLTGKSYYLLPRN---------------RGEGEMGMIRAREGHVRSNS 97
           D +LL+G+ YYLLP                   EG+  ++R  E    SNS
Sbjct: 61  DAKLLSGRLYYLLPTTMTKKKVNKKVTFANPEVEGDERLLREEEDSSESNS 102

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g06650 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG01g06650 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022942635.1	3.80e-151	100.00	uncharacterized protein LOC111447612 [Cucurbita moschata] >XP_023549744.1 unchar...	[more]
XP_022982653.1	5.40e-151	99.54	uncharacterized protein LOC111481463 [Cucurbita maxima]	[more]
XP_038902281.1	4.30e-135	89.78	uncharacterized protein LOC120088913 [Benincasa hispida]	[more]
XP_022985129.1	7.88e-129	87.61	uncharacterized protein LOC111483212 [Cucurbita maxima]	[more]
XP_008452047.1	1.59e-128	86.28	PREDICTED: uncharacterized protein LOC103493172 [Cucumis melo] >TYK16646.1 DUF42...	[more]

BLAST of Cp4.1LG01g06650 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FWN5	1.84e-151	100.00	uncharacterized protein LOC111447612 OS=Cucurbita moschata OX=3662 GN=LOC1114476...	[more]
A0A6J1J5E2	2.61e-151	99.54	uncharacterized protein LOC111481463 OS=Cucurbita maxima OX=3661 GN=LOC111481463...	[more]
A0A6J1JCF7	3.82e-129	87.61	uncharacterized protein LOC111483212 OS=Cucurbita maxima OX=3661 GN=LOC111483212...	[more]
A0A5A7TPJ8	7.70e-129	86.28	DUF4228 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5D3D1S5	7.70e-129	86.28	DUF4228 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]

BLAST of Cp4.1LG01g06650 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G64700.1	3.0e-34	45.27	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]
AT3G61920.1	2.2e-24	37.98	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]
AT5G03890.1	1.5e-04	31.53	unknown protein; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cel...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025322	Protein of unknown function DUF4228, plant	PFAM	PF14009	DUF4228	coord: 1..160 e-value: 1.7E-16 score: 61.2
None	No IPR available	PANTHER	PTHR33148	PLASTID MOVEMENT IMPAIRED PROTEIN-RELATED	coord: 1..202
None	No IPR available	PANTHER	PTHR33148:SF48	DUF4228 DOMAIN PROTEIN	coord: 1..202

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g06650.1	Cp4.1LG01g06650.1	mRNA