Cp4.1LG01g06400 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAAGGGTAAAGTTGTAATTAAATTTTAGGATAAATATACAAAAATAAAAATGATAGAGAAGTTGTAACTTACAAAAAATGATAAGGAAAAAGGAAAAAATAAGCAATAAAATTAATAGTATTAAGACAGAGAGAGAGGGAGAGAAAAGGAAGGAAAAACTTTCACTTCTTTTCTCTCTACTTCTCTCTTTTTCCTCTATCCATTCCTGAGTCTCTGAGATGCCAAAGCCATGTCGGAGCCTCCGACGACATCAACGGAGCCACAGCGTCAGCATCAGCATCAGTATGAGCAGCAGCAACATCCCCACCATCTCCTACATTTACCCCTAATCCACGGTGGCGCATCCACGGGCACCACTGCCCGAATCAACACTGCAGCAGCAACCTCACCCTCGACAGTAATAGTCCGAGAGTACCGCAAAGGGAACTGGAATCTCCAAGAGACGATGATTCTGATAACCGCGAAAAAGCTGGACGAGGAACGGCGGAACAAGGCGGAGCAAGGAACGGCCAGAAAGGGCAGCGAGCTGCGGTGGAAGTGGGTGGAAAACTACTGCTGGAGCCAGGGGTGCCAGCGGAGCCAAAATCAGTGCAACGACAAGTGGGATAACCTACTCCGCGACTACAAAAAAGTCCGGGAGCACGAATCCCGCGCGTGCGATCAATCCCAAATTCCGTCTTACTGGAAAATGGAAAAGCATGAGCGTAAGGACAACAATCTTCCTTCTAACATGGCCTTTGAGGTGTATCAGGCCTTAAACGACGTGGTTCAGAGGAAGCTCAGAGGTGTGTCTGTTGCTGTTGTTGCTGGTCCTCCGCCTCCTCCTTCCCCCGCCGAGGGCGAGGCTGCGGCGGGGACTAGTTCCCCGGCGGCTTCAGGTGAGTGTGTTTTTGTTTGTGTGTGGGTGTGTGTGGGGTACTATTAAATTTGATTTTATTATATTATTTTCGGCCCGGACCTTTCGTTTTCGGCCTGGTTCGAGTTAATAGTGTGGGTCAAAGTTGCAGGGTTTGACTCTGCCACAATTTTGAATAGGACCCTCCTTCCTCCTTTTCATTTCGTTATTCGCTTTCTAATCCTCTACGGACGCCTCTACCATCTGCAGATGGGGCCTCCAAATCTTATCCCTCCGATTACGTTGGGTGATACAGTCATCCATATGAATTTAATATAAGTGGGATTAATTTTGCAATCATGATTAATACAAATCTAAGCATGCAATCCCATAAGTAAATATTTATTGTTTACTTACTAATTTTGTCTTCTTCTTCTTTTTAAAATCTCTCTTATTTTACCGCTTCTTTAAAATTTATGGATGGATATATTTACCAAATGCAGATTCTTGAGCTTTATGTATATATATATATTTGAAATTTGATTGTGTGGGCATATGTGTATATATATATACAGAGTCGTCGTCGTCGTCGTCGGGGCAGAAGAAAGAGAAGAGGGAGAGAAAGAGGAGAAGAGTGGGAAGAAGCATTGAGAGAAGCGCGTCGGCGGTGGCTCAAACGCTGCGGACCTGCGAGGAGCAGAGGGAGATCCGACACCAACAACTGATGGAGCTTAAGAAACGGCGCCTTCAAATCCAAGAAGCCCGCAACCACATTCAGGGTCAAGGCATCGCCGACCTCGTGGCCGCGGTTGCCAACCTCTCCGGTACATGTGCATATGTATATATATATATATATATAAATAAGAAAAAGAAAGGAATTAGGGTTTATGTTGACTTGGTGGGGGGATGTTTTGAGTGTAGGCATAAACAATAGAAGAAGAAGAAGAAGATCAGAAGAGTATGAATGTTTATACAGTGGAGAAGAGGTGAGAATGTTGAAAGAACAAAATGAGGCAATGCAGGCTGAGCTTTCGAGCGTCAAGACTGAGCTTTCTCAACTCCGAGACCAAATGCCCTCTCTCGTGCGAACCATGATGCACAATGCGATGCACAACATCCCTCCTCCTCCTCCTCCTCCTTCCATGGTACTCTCTCCCTCTCCCTCTCCCTCCCTATGCATCCATCCATATTATTCTAAATAATATATATAATATTGACTATATGTTCTGTTCATCTTTGTTTGTATAGGACCCAGGTGGAGATGGTTACAAATAATTGGTTATTAATTCATTCACAAAATTACTACAATTCATCATTGTTTCATATCATATGGAGTTTAATGATTTTGTAAAACTTGTTTAATATAATTTATTTTTATTATTATTCCCCATACACAACCACAACCAACGCTGAGCATCCAAAATGAAATGCCAGAGTACCACGGACTTAAATATGAGAGAGATCACACTGTGTTTTTGCAGACTCTGTCAGAACGACTGGTCAAACCTTGTGAATTCCATTTTCACCACATTTACCCCTGCCCCCTCCCCACCATGTTCTGCCCTCCACCTGACACTTCCGCCTTTTCTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNCAAACAAACACCATAACCTTTTTCAGGGCTTATTATTTTCCCTTTCTCAAATGACCCTTTTACCCCTTCTCCCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTCTCACCGCCCATTCGAACGCTTTCGTTTCTTTTCCTCCCAATTTATCGTTTCCCAAAATATCGGCAAAACGGGGTAATGGTAATGAGTAATTGACATTTACCTTTCGTGAGTCAAACGTGTTGCCTTGCCACGTCAACTACCGTCACCCTTTGACACCACCTTTTTTTTTTTTTTTTTTTTAAGTAAAAAAAGTTTATAATATCCCTTTTTTATATTTGTTTTTATATGTAAGCTTATTTATCCAAGTCATAGTGATCAAATCTAGAGGTCTTTTTTTCTTAGCTTTCAGAAGTCTGTTGTCGCTTGTACCTTCATTCAGTTTACTAACATTTGTATTAAAAATATCTACCTACCAGCGTAATCCACTACTACTGTTTTCACGGATGAATCTCTCTCTTTTAATAAGTCACAGAAGTAGTGCAGAAGCAGTGTAGTGCATAATACAATTAAATTACACATAGTGCAATATATATTTACTAAAAAACTAGCCCAAATAGTTTCACTGTTGTCCCTTTTTCGGTCATTCTCCATATTATTATTGTGATTTTTTTCTTTATTCAAACTAGTGAAATTGGGACGTCCTTTTACTGTATTCACTAGAAATTGTACGAAGATTGAAATAAAAATATATAGTTATGTGCATAAGATCTCACCATCCAAACTTTCTCGAGAAGACTCTATTCGAGTCATTATGTTAAATAAAAATGAACTAGGGTTAGTATATTTTAACCATGTTATGAGAAATATTCAAATTTAATGAATTTTGGGTCGTTTACTGCGGGGCTACAATTGTTT AAAAGGGTAAAGTTGTAATTAAATTTTAGGATAAATATACAAAAATAAAAATGATAGAGAAGTTGTAACTTACAAAAAATGATAAGGAAAAAGGAAAAAATAAGCAATAAAATTAATAGTATTAAGACAGAGAGAGAGGGAGAGAAAAGGAAGGAAAAACTTTCACTTCTTTTCTCTCTACTTCTCTCTTTTTCCTCTATCCATTCCTGAGTCTCTGAGATGCCAAAGCCATGTCGGAGCCTCCGACGACATCAACGGAGCCACAGCGTCAGCATCAGCATCAGTATGAGCAGCAGCAACATCCCCACCATCTCCTACATTTACCCCTAATCCACGGTGGCGCATCCACGGGCACCACTGCCCGAATCAACACTGCAGCAGCAACCTCACCCTCGACAGTAATAGTCCGAGAGTACCGCAAAGGGAACTGGAATCTCCAAGAGACGATGATTCTGATAACCGCGAAAAAGCTGGACGAGGAACGGCGGAACAAGGCGGAGCAAGGAACGGCCAGAAAGGGCAGCGAGCTGCGGTGGAAGTGGGTGGAAAACTACTGCTGGAGCCAGGGGTGCCAGCGGAGCCAAAATCAGTGCAACGACAAGTGGGATAACCTACTCCGCGACTACAAAAAAGTCCGGGAGCACGAATCCCGCGCGTGCGATCAATCCCAAATTCCGTCTTACTGGAAAATGGAAAAGCATGAGCGTAAGGACAACAATCTTCCTTCTAACATGGCCTTTGAGGTGTATCAGGCCTTAAACGACGTGGTTCAGAGGAAGCTCAGAGGTGTGTCTGTTGCTGTTGTTGCTGGTCCTCCGCCTCCTCCTTCCCCCGCCGAGGGCGAGGCTGCGGCGGGGACTAGTTCCCCGGCGGCTTCAGAGTCGTCGTCGTCGTCGTCGGGGCAGAAGAAAGAGAAGAGGGAGAGAAAGAGGAGAAGAGTGGGAAGAAGCATTGAGAGAAGCGCGTCGGCGGTGGCTCAAACGCTGCGGACCTGCGAGGAGCAGAGGGAGATCCGACACCAACAACTGATGGAGCTTAAGAAACGGCGCCTTCAAATCCAAGAAGCCCGCAACCACATTCAGGGTCAAGGCATCGCCGACCTCGTGGCCGCGGTTGCCAACCTCTCCGGCATAAACAATAGAAGAAGAAGAAGAAGATCAGAAGAGTATGAATGTTTATACAGTGGAGAAGAGGTGAGAATGTTGAAAGAACAAAATGAGGCAATGCAGGCTGAGCTTTCGAGCGTCAAGACTGAGCTTTCTCAACTCCGAGACCAAATGCCCTCTCTCGTGCGAACCATGATGCACAATGCGATGCACAACATCCCTCCTCCTCCTCCTCCTCCTTCCATGGACCCAGGTGGAGATGGTTACAAATAATTGGTTATTAATTCATTCACAAAATTACTACAATTCATCATTGTTTCATATCATATGGAGTTTAATGATTTTGTAAAACTTGTTTAATATAATTTATTTTTATTATTATTCCCCATACACAACCACAACCAACGCTGAGCATCCAAAATGAAATGCCAGAGTACCACGGACTTAAATATGAGAGAGATCACACTGTGTTTTTGCAGACTCTGTCAGAACGACTGGTCAAACCTTGTGAATTCCATTTTCACCACATTTACCCCTGCCCCCTCCCCACCATGTTCTGCCCTCCACCTGACACTTCCGCCTTTTCTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNCAAACAAACACCATAACCTTTTTCAGGGCTTATTATTTTCCCTTTCTCAAATGACCCTTTTACCCCTTCTCCCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTCTCACCGCCCATTCGAACGCTTTCGTTTCTTTTCCTCCCAATTTATCGTTTCCCAAAATATCGGCAAAACGGGGTAATGGTAATGAGTAATTGACATTTACCTTTCGTGAGTCAAACGTGTTGCCTTGCCACGTCAACTACCGTCACCCTTTGACACCACCTTTTTTTTTTTTTTTTTTTTAAGTAAAAAAAGTTTATAATATCCCTTTTTTATATTTGTTTTTATATGTAAGCTTATTTATCCAAGTCATAGTGATCAAATCTAGAGGTCTTTTTTTCTTAGCTTTCAGAAGTCTGTTGTCGCTTGTACCTTCATTCAGTTTACTAACATTTGTATTAAAAATATCTACCTACCAGCGTAATCCACTACTACTGTTTTCACGGATGAATCTCTCTCTTTTAATAAGTCACAGAAGTAGTGCAGAAGCAGTGTAGTGCATAATACAATTAAATTACACATAGTGCAATATATATTTACTAAAAAACTAGCCCAAATAGTTTCACTGTTGTCCCTTTTTCGGTCATTCTCCATATTATTATTGTGATTTTTTTCTTTATTCAAACTAGTGAAATTGGGACGTCCTTTTACTGTATTCACTAGAAATTGTACGAAGATTGAAATAAAAATATATAGTTATGTGCATAAGATCTCACCATCCAAACTTTCTCGAGAAGACTCTATTCGAGTCATTATGTTAAATAAAAATGAACTAGGGTTAGTATATTTTAACCATGTTATGAGAAATATTCAAATTTAATGAATTTTGGGTCGTTTACTGCGGGGCTACAATTGTTT ATGTCGGAGCCTCCGACGACATCAACGGAGCCACAGCGTCAGCATCAGCATCAGTATGAGCAGCAGCAACATCCCCACCATCTCCTACATTTACCCCTAATCCACGGTGGCGCATCCACGGGCACCACTGCCCGAATCAACACTGCAGCAGCAACCTCACCCTCGACAGTAATAGTCCGAGAGTACCGCAAAGGGAACTGGAATCTCCAAGAGACGATGATTCTGATAACCGCGAAAAAGCTGGACGAGGAACGGCGGAACAAGGCGGAGCAAGGAACGGCCAGAAAGGGCAGCGAGCTGCGGTGGAAGTGGGTGGAAAACTACTGCTGGAGCCAGGGGTGCCAGCGGAGCCAAAATCAGTGCAACGACAAGTGGGATAACCTACTCCGCGACTACAAAAAAGTCCGGGAGCACGAATCCCGCGCGTGCGATCAATCCCAAATTCCGTCTTACTGGAAAATGGAAAAGCATGAGCGTAAGGACAACAATCTTCCTTCTAACATGGCCTTTGAGGTGTATCAGGCCTTAAACGACGTGGTTCAGAGGAAGCTCAGAGGTGTGTCTGTTGCTGTTGTTGCTGGTCCTCCGCCTCCTCCTTCCCCCGCCGAGGGCGAGGCTGCGGCGGGGACTAGTTCCCCGGCGGCTTCAGAGTCGTCGTCGTCGTCGTCGGGGCAGAAGAAAGAGAAGAGGGAGAGAAAGAGGAGAAGAGTGGGAAGAAGCATTGAGAGAAGCGCGTCGGCGGTGGCTCAAACGCTGCGGACCTGCGAGGAGCAGAGGGAGATCCGACACCAACAACTGATGGAGCTTAAGAAACGGCGCCTTCAAATCCAAGAAGCCCGCAACCACATTCAGGGTCAAGGCATCGCCGACCTCGTGGCCGCGGTTGCCAACCTCTCCGGCATAAACAATAGAAGAAGAAGAAGAAGATCAGAAGAGTATGAATGTTTATACAGTGGAGAAGAGGTGAGAATGTTGAAAGAACAAAATGAGGCAATGCAGGCTGAGCTTTCGAGCGTCAAGACTGAGCTTTCTCAACTCCGAGACCAAATGCCCTCTCTCGTGCGAACCATGATGCACAATGCGATGCACAACATCCCTCCTCCTCCTCCTCCTCCTTCCATGGACCCAGGTGGAGATGGTTACAAATAA MSEPPTTSTEPQRQHQHQYEQQQHPHHLLHLPLIHGGASTGTTARINTAAATSPSTVIVREYRKGNWNLQETMILITAKKLDEERRNKAEQGTARKGSELRWKWVENYCWSQGCQRSQNQCNDKWDNLLRDYKKVREHESRACDQSQIPSYWKMEKHERKDNNLPSNMAFEVYQALNDVVQRKLRGVSVAVVAGPPPPPSPAEGEAAAGTSSPAASESSSSSSGQKKEKRERKRRRVGRSIERSASAVAQTLRTCEEQREIRHQQLMELKKRRLQIQEARNHIQGQGIADLVAAVANLSGINNRRRRRRSEEYECLYSGEEVRMLKEQNEAMQAELSSVKTELSQLRDQMPSLVRTMMHNAMHNIPPPPPPPSMDPGGDGYK Homology
BLAST of Cp4.1LG01g06400 vs. ExPASy Swiss-Prot
Match: Q8VZ20 (Trihelix transcription factor ASR3 OS=Arabidopsis thaliana OX=3702 GN=ASR3 PE=1 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 7.1e-07 Identity = 61/211 (28.91%), Postives = 90/211 (42.65%), Query Frame = 0
BLAST of Cp4.1LG01g06400 vs. NCBI nr
Match: XP_023539877.1 (uncharacterized protein LOC111800420 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 724 bits (1870), Expect = 7.46e-263 Identity = 382/382 (100.00%), Postives = 382/382 (100.00%), Query Frame = 0
BLAST of Cp4.1LG01g06400 vs. NCBI nr
Match: KAG6599857.1 (Trihelix transcription factor ASR3, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 697 bits (1799), Expect = 5.31e-252 Identity = 374/386 (96.89%), Postives = 376/386 (97.41%), Query Frame = 0
BLAST of Cp4.1LG01g06400 vs. NCBI nr
Match: XP_022942159.1 (trihelix transcription factor ASR3-like [Cucurbita moschata]) HSP 1 Score: 684 bits (1765), Expect = 8.35e-247 Identity = 372/388 (95.88%), Postives = 374/388 (96.39%), Query Frame = 0
BLAST of Cp4.1LG01g06400 vs. NCBI nr
Match: XP_022986588.1 (trihelix transcription factor ASR3-like [Cucurbita maxima]) HSP 1 Score: 675 bits (1741), Expect = 3.65e-243 Identity = 364/387 (94.06%), Postives = 370/387 (95.61%), Query Frame = 0
BLAST of Cp4.1LG01g06400 vs. NCBI nr
Match: XP_022997995.1 (trihelix transcription factor ASR3-like [Cucurbita maxima]) HSP 1 Score: 489 bits (1260), Expect = 1.46e-169 Identity = 291/419 (69.45%), Postives = 321/419 (76.61%), Query Frame = 0
BLAST of Cp4.1LG01g06400 vs. ExPASy TrEMBL
Match: A0A6J1FQH6 (trihelix transcription factor ASR3-like OS=Cucurbita moschata OX=3662 GN=LOC111447303 PE=4 SV=1) HSP 1 Score: 684 bits (1765), Expect = 4.04e-247 Identity = 372/388 (95.88%), Postives = 374/388 (96.39%), Query Frame = 0
BLAST of Cp4.1LG01g06400 vs. ExPASy TrEMBL
Match: A0A6J1JGY9 (trihelix transcription factor ASR3-like OS=Cucurbita maxima OX=3661 GN=LOC111484283 PE=4 SV=1) HSP 1 Score: 675 bits (1741), Expect = 1.77e-243 Identity = 364/387 (94.06%), Postives = 370/387 (95.61%), Query Frame = 0
BLAST of Cp4.1LG01g06400 vs. ExPASy TrEMBL
Match: A0A6J1KBG1 (trihelix transcription factor ASR3-like OS=Cucurbita maxima OX=3661 GN=LOC111492779 PE=4 SV=1) HSP 1 Score: 489 bits (1260), Expect = 7.08e-170 Identity = 291/419 (69.45%), Postives = 321/419 (76.61%), Query Frame = 0
BLAST of Cp4.1LG01g06400 vs. ExPASy TrEMBL
Match: A0A1S3C482 (trihelix transcription factor PTL-like OS=Cucumis melo OX=3656 GN=LOC103496697 PE=4 SV=1) HSP 1 Score: 474 bits (1219), Expect = 6.82e-164 Identity = 289/403 (71.71%), Postives = 314/403 (77.92%), Query Frame = 0
BLAST of Cp4.1LG01g06400 vs. ExPASy TrEMBL
Match: A0A6J1GZY0 (trihelix transcription factor ASR3-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111458675 PE=4 SV=1) HSP 1 Score: 465 bits (1197), Expect = 3.22e-160 Identity = 279/395 (70.63%), Postives = 307/395 (77.72%), Query Frame = 0
BLAST of Cp4.1LG01g06400 vs. TAIR 10
Match: AT2G35640.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 166.8 bits (421), Expect = 3.5e-41 Identity = 110/315 (34.92%), Postives = 168/315 (53.33%), Query Frame = 0
BLAST of Cp4.1LG01g06400 vs. TAIR 10
Match: AT1G31310.1 (hydroxyproline-rich glycoprotein family protein ) HSP 1 Score: 166.0 bits (419), Expect = 5.9e-41 Identity = 126/368 (34.24%), Postives = 171/368 (46.47%), Query Frame = 0
BLAST of Cp4.1LG01g06400 vs. TAIR 10
Match: AT2G33550.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 56.6 bits (135), Expect = 5.0e-08 Identity = 61/211 (28.91%), Postives = 90/211 (42.65%), Query Frame = 0
BLAST of Cp4.1LG01g06400 vs. TAIR 10
Match: AT5G51800.1 (Protein kinase superfamily protein ) HSP 1 Score: 47.8 bits (112), Expect = 2.3e-05 Identity = 34/110 (30.91%), Postives = 50/110 (45.45%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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