Cp4.1LG01g06280 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTCTTTGTTCTTCCAGATATGGGGCTGTACTACGGAGCTAAAGAGGTCCTAAAGATTCAAAAGTTTCGAAGACTTGTGTCCTATACTGGATTCTATCTCTTCGTTTCCGTTTTGAGTTACGCTTATACAAGCAATACGTGAGTTTAGACATTGCTCTTTAATTTTGTCCACTTTTTTGTTCTCTAATTGTTGTTCGGGGTATTGCAGAACTAGAGCTGGGTATTCTCGAGGGGATCAATTTTATGCTTCTTACCCTGCTGGTACAGAGCTCTTGACAGACACTACGAAGGTTTTTGCGTTCTTTGATTTGGGCTTCATACTCTTTTGATGTTCACAACTCTTGTGCTAATTTTCATTTTGTTTGCTGTAGTTGTACAAAGCTGCTCTTGGGAATTGTTTTGAAATAGAAGAATGGGGTCCAATTGAATTCTGCGTCATGGCTAAACATTTTGAACGTCAAGGAAAATCGCCTTATGCATATCATTCTGTAAGTTTGCCTCGTCTTTTGGTTGTTCTCTTTCTAGTTTGGTACGTAATTATGATTCCTGCTGAGTGTTGAATTGTTTTGTATTACACTGATTTCTGGTCAGATTTTTAGTTCAGTTTAATGATTCCAATGTGGGAATTAGGAGAACAAATCATATGGAAGTTATGTAAGTGCATGAAACTCTGAAATTTGCTGCTTTGTTAAGAGTTAAGAAATGTTGTTAAGATGAAAGAATACCCTTTTATGAAGTCATTGATGACAATGAAATGAGGAGATTATGATAATTTATAGCCTTTGTTCTCTGTTCAACTAGGGAGAAAGATTTATAAAGCTCTATTGCCAGTTTGGAATTAGCTGGAGTGATTATAGTTGTATAGTTGTTCCATCTGTAGGTATACAAATTTTAAGATGCTGTCTAAATGAACTGTAGTCTAATTATGGGCATTAACTATTTCTGAAATGAAGGTCGAGCTATGCAACAAACCAAGGATATAACATGTTAGGATCACAATAACAAGAAAACATTAATAGAACTATATTGCAATATCAATAGAAATTACAATACCAATATAGTCTTTTGAGAGGGCTGTCCCCCAAAATTCCTGCACTAAGACAATGAAGCAAAAACATTTTCCCTTTTCTAAGAAAACCCTAACACCCGGATTTATGACCAATACACACCAGACTAATAACAAATACACCCCTTACTACCACTATATCCTTGCTTATATGCCCAGCTTGTTCCTTACAAGTACTCAAACTCACATGAACACTTGAAGAAAGCCATATATAAGATGGAACGAATATCATCACATGTTTCGGATCAGAAATGGAGCTTTTTCTGGTGCATATTTATCATATCCTCTAACTATGTTTGTGAGGCTGTACAAAATGGAAGTCCACATCCAGGGAATTACCACTATAGCTCATTTTTTGTTTAAATTCTGGCAGCAATACATGGCACATCTTCTGTCTCATGGACAACTTGATGGAAGTGGGTAGGAAAACACCAATCAACAACCAAAGAGCTTTGAGACTTTTTACTACCATGATGGGGCTGCGCACTTCAATACTAAAATTCTAATTTTTTTGAAATTGAAGCATTGTTGTAGGTTTGAGCATAGATAGCTCAATTGATCATGATTACACGAATAACTTCACTTATGGGTCTTAGGTTCGAATCATCGCCCCTTTGTTTGATTTGTATTATTCTTTGAATATATATGGATCGGCTGCTAGGCATTGTATGTTACTAATTATACGAGAACATAAATAAGACTTGATCTTCCCCTCTTCCATT GTCTTTGTTCTTCCAGATATGGGGCTGTACTACGGAGCTAAAGAGGTCCTAAAGATTCAAAAGTTTCGAAGACTTGTGTCCTATACTGGATTCTATCTCTTCGTTTCCGTTTTGAGTTACGCTTATACAAGCAATACAACTAGAGCTGGGTATTCTCGAGGGGATCAATTTTATGCTTCTTACCCTGCTGGTACAGAGCTCTTGACAGACACTACGAAGTTGTACAAAGCTGCTCTTGGGAATTGTTTTGAAATAGAAGAATGGGGTCCAATTGAATTCTGCGTCATGGCTAAACATTTTGAACGTCAAGGAAAATCGCCTTATGCATATCATTCTCAATACATGGCACATCTTCTGTCTCATGGACAACTTGATGGAAGTGGGTAGGAAAACACCAATCAACAACCAAAGAGCTTTGAGACTTTTTACTACCATGATGGGGCTGCGCACTTCAATACTAAAATTCTAATTTTTTTGAAATTGAAGCATTGTTGTAGGTTTGAGCATAGATAGCTCAATTGATCATGATTACACGAATAACTTCACTTATGGGTCTTAGGTTCGAATCATCGCCCCTTTGTTTGATTTGTATTATTCTTTGAATATATATGGATCGGCTGCTAGGCATTGTATGTTACTAATTATACGAGAACATAAATAAGACTTGATCTTCCCCTCTTCCATT GTCTTTGTTCTTCCAGATATGGGGCTGTACTACGGAGCTAAAGAGGTCCTAAAGATTCAAAAGTTTCGAAGACTTGTGTCCTATACTGGATTCTATCTCTTCGTTTCCGTTTTGAGTTACGCTTATACAAGCAATACAACTAGAGCTGGGTATTCTCGAGGGGATCAATTTTATGCTTCTTACCCTGCTGGTACAGAGCTCTTGACAGACACTACGAAGTTGTACAAAGCTGCTCTTGGGAATTGTTTTGAAATAGAAGAATGGGGTCCAATTGAATTCTGCGTCATGGCTAAACATTTTGAACGTCAAGGAAAATCGCCTTATGCATATCATTCTCAATACATGGCACATCTTCTGTCTCATGGACAACTTGATGGAAGTGGGTAG VFVLPDMGLYYGAKEVLKIQKFRRLVSYTGFYLFVSVLSYAYTSNTTRAGYSRGDQFYASYPAGTELLTDTTKLYKAALGNCFEIEEWGPIEFCVMAKHFERQGKSPYAYHSQYMAHLLSHGQLDGSG Homology
BLAST of Cp4.1LG01g06280 vs. NCBI nr
Match: KAG6599887.1 (hypothetical protein SDJN03_05120, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 255 bits (651), Expect = 3.29e-85 Identity = 124/125 (99.20%), Postives = 124/125 (99.20%), Query Frame = 0
BLAST of Cp4.1LG01g06280 vs. NCBI nr
Match: XP_022942452.1 (uncharacterized protein LOC111447487 [Cucurbita moschata] >XP_022942453.1 uncharacterized protein LOC111447487 [Cucurbita moschata] >XP_022942454.1 uncharacterized protein LOC111447487 [Cucurbita moschata] >XP_023534356.1 uncharacterized protein LOC111795941 [Cucurbita pepo subsp. pepo] >XP_023534363.1 uncharacterized protein LOC111795941 [Cucurbita pepo subsp. pepo] >KAG7030572.1 hypothetical protein SDJN02_04609 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 251 bits (642), Expect = 3.36e-84 Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0
BLAST of Cp4.1LG01g06280 vs. NCBI nr
Match: XP_022976595.1 (uncharacterized protein LOC111476941 [Cucurbita maxima] >XP_022976600.1 uncharacterized protein LOC111476941 [Cucurbita maxima] >XP_022976608.1 uncharacterized protein LOC111476941 [Cucurbita maxima]) HSP 1 Score: 248 bits (634), Expect = 5.58e-83 Identity = 121/122 (99.18%), Postives = 121/122 (99.18%), Query Frame = 0
BLAST of Cp4.1LG01g06280 vs. NCBI nr
Match: XP_022150011.1 (uncharacterized protein LOC111018291 isoform X1 [Momordica charantia]) HSP 1 Score: 247 bits (631), Expect = 3.86e-81 Identity = 118/127 (92.91%), Postives = 122/127 (96.06%), Query Frame = 0
BLAST of Cp4.1LG01g06280 vs. NCBI nr
Match: XP_004149132.1 (uncharacterized protein LOC101204884 [Cucumis sativus] >KGN49556.1 hypothetical protein Csa_018495 [Cucumis sativus]) HSP 1 Score: 243 bits (621), Expect = 5.37e-81 Identity = 115/122 (94.26%), Postives = 120/122 (98.36%), Query Frame = 0
BLAST of Cp4.1LG01g06280 vs. ExPASy TrEMBL
Match: A0A6J1FUV5 (uncharacterized protein LOC111447487 OS=Cucurbita moschata OX=3662 GN=LOC111447487 PE=4 SV=1) HSP 1 Score: 251 bits (642), Expect = 1.63e-84 Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0
BLAST of Cp4.1LG01g06280 vs. ExPASy TrEMBL
Match: A0A6J1IJX1 (uncharacterized protein LOC111476941 OS=Cucurbita maxima OX=3661 GN=LOC111476941 PE=4 SV=1) HSP 1 Score: 248 bits (634), Expect = 2.70e-83 Identity = 121/122 (99.18%), Postives = 121/122 (99.18%), Query Frame = 0
BLAST of Cp4.1LG01g06280 vs. ExPASy TrEMBL
Match: A0A6J1DA58 (uncharacterized protein LOC111018291 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111018291 PE=4 SV=1) HSP 1 Score: 247 bits (631), Expect = 1.87e-81 Identity = 118/127 (92.91%), Postives = 122/127 (96.06%), Query Frame = 0
BLAST of Cp4.1LG01g06280 vs. ExPASy TrEMBL
Match: A0A0A0KPE6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G001030 PE=4 SV=1) HSP 1 Score: 243 bits (621), Expect = 2.60e-81 Identity = 115/122 (94.26%), Postives = 120/122 (98.36%), Query Frame = 0
BLAST of Cp4.1LG01g06280 vs. ExPASy TrEMBL
Match: A0A6J1D9J7 (uncharacterized protein LOC111018291 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111018291 PE=4 SV=1) HSP 1 Score: 244 bits (623), Expect = 2.62e-80 Identity = 116/123 (94.31%), Postives = 120/123 (97.56%), Query Frame = 0
BLAST of Cp4.1LG01g06280 vs. TAIR 10
Match: AT1G14990.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 34 Blast hits to 34 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 205.3 bits (521), Expect = 2.9e-53 Identity = 93/114 (81.58%), Postives = 103/114 (90.35%), Query Frame = 0
BLAST of Cp4.1LG01g06280 vs. TAIR 10
Match: AT1G14990.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages. ) HSP 1 Score: 197.2 bits (500), Expect = 8.0e-51 Identity = 93/124 (75.00%), Postives = 103/124 (83.06%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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