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Cp4.1LG01g06250 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CATCATCCACTTCGGTTTTCTCTCTCTTGTACCTTTCTCTCTCTCTCCTCCCCCACCTCTTAAAACTGCCTATTTCTTCTTCTTCTTGGTTTGCAAAGCTTCATCAACAGACTTCCATGGCGGTTCTACCAACCAACTCTTCAAGATTGGATCTCACCATCTCTGTACCCGGCTTCACTTCATTCTCATCATCACCACTTCCTCCATCTGGTACACCAACATCTTTCTTTTTCGGTTTTAATAGAGTACGAATAAATGATTAAATACATGGTACCATGTGGAGTGAATTTTTTAAAATTAATTTTTAGTAGTGATTTTAAGTATTAAAAGTGTTACAATAAGTTTTGAATGGATGATTGAAGGTGTAATAATTTTTGGTTGCAGCGGTGCGAGATTTGGACATGAATAGAGCGCCGGATGAAGAGGAATGGATGATGGGAAGCATGGAGGAAGATGAAGAAAACAACAGTGGAAGCCATCCAAGGAAGAAGCTACGTTTAACAAAGGAACAGTCTCATCTTCTTGAACAAAGCTTCAGACAAAACCATACCTTAAACCCAGTACTACAATTCTCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTTCTTTATTTTAATCTCTCAAAACCCCAATATTTCAATACCTTTTTTCCTCCATTTCTTTTTTTGGTTAGAAACAAAAGGAGACTCTTGCGGAAGTGCTGAAGCTGAAGCCAAGGCAGGTTGAGGTTTGGTTTCAGAACCGAAGGGCCAGGTGAATCAACTTATATCCTATGCATGTTTTGGTGATTCTATTATAATTCTTCAGAACCTAACAAAGGAAAGATTTAATCCAAACTAAAAGAGGAGGAGGTTTGAGAAGGAACAGGAATAGGAATAGGAATAGGGATAATCCACAAACAAGTGTTGTTAATTAAACTATATAACATAATGTTGTCCGCTTCCATAAAATAATAATAATAATGGAATTATGGGGTAAGATATGCAACGCCACCAAGAGACAATAGGTGAGCAAAATTATGAACTAGTTATGATGTGGTTTCCCCATGAGTTTAAATATTTCAATAACACATACAATGTCGAGGCTGCTCCCCCTCGCCGCCTCGTGTGTGTGTGTGGCTTCACTGCCCATATGCATATCATATTATATATTTTATTCCATCTTTTTCCTTACCCATATGTGTATCACCTCAACATTTGCATATCTATCTAATTCTCCTATGTGTTGGATTCCGAGTATTAAAATCATTCAAGTTTCGAAGCCATTACAACTCATTATTGTGTCACCCTATTATGGGTACAAAAATTATGGGTACAAAGATGAAGTGAAAATAAGGTGATTAAAGTAAATTTGCATACACCATTTAATTTGGTTGGGTAATAATTAGAATCCAAGAAGACAATAATGATGTTCTTGTCTTTCATGTAAAAGGGTTTCAATTTGCATTTATTTCACTTTCATGTATCTTTTTTGTTACCCACAATTATTCGTATTTTTTGTAGTCACAACATACTATTTTTCAAACTATATTATTATTGCATTTACTTTTGCTTTTGTATTAATTAAGCATTTATTTGGGTGTGAATTTAAAAAACAAAATAATATATCCATAATCACTCCATTAATTTGATTTACATTTAATTATTCATTAGGAGCAAGCTGAAGCAGACCGAGATGGAGTGCGAGTATCTGAAGAGATGGTTCGGGCTCTTGACGGAGCAAAACAAGAAACTGCAGAAGGAGGTGGAGGAGCTGAGGGCGATGAAGGTGGCGCCCCCGACGGTGATTTCACCACACAGCTGCGAGCCGCTGCCGGCGTCGAACCTCACAATGTGTCCACGCTGCGAGCGCGTGACCACTACCACCCTCGACAAGACCCGCATTGTCGTTTAAGCTGGTCGGCCGCTGCCCATTATTGCCTTTTTTTTTTT CATCATCCACTTCGGTTTTCTCTCTCTTGTACCTTTCTCTCTCTCTCCTCCCCCACCTCTTAAAACTGCCTATTTCTTCTTCTTCTTGGTTTGCAAAGCTTCATCAACAGACTTCCATGGCGGTTCTACCAACCAACTCTTCAAGATTGGATCTCACCATCTCTGTACCCGGCTTCACTTCATTCTCATCATCACCACTTCCTCCATCTGCGGTGCGAGATTTGGACATGAATAGAGCGCCGGATGAAGAGGAATGGATGATGGGAAGCATGGAGGAAGATGAAGAAAACAACAGTGGAAGCCATCCAAGGAAGAAGCTACGTTTAACAAAGGAACAGTCTCATCTTCTTGAACAAAGCTTCAGACAAAACCATACCTTAAACCCAAAACAAAAGGAGACTCTTGCGGAAGTGCTGAAGCTGAAGCCAAGGCAGGTTGAGGTTTGGTTTCAGAACCGAAGGGCCAGGAGCAAGCTGAAGCAGACCGAGATGGAGTGCGAGTATCTGAAGAGATGGTTCGGGCTCTTGACGGAGCAAAACAAGAAACTGCAGAAGGAGGTGGAGGAGCTGAGGGCGATGAAGGTGGCGCCCCCGACGGTGATTTCACCACACAGCTGCGAGCCGCTGCCGGCGTCGAACCTCACAATGTGTCCACGCTGCGAGCGCGTGACCACTACCACCCTCGACAAGACCCGCATTGTCGTTTAAGCTGGTCGGCCGCTGCCCATTATTGCCTTTTTTTTTTT ATGGCGGTTCTACCAACCAACTCTTCAAGATTGGATCTCACCATCTCTGTACCCGGCTTCACTTCATTCTCATCATCACCACTTCCTCCATCTGCGGTGCGAGATTTGGACATGAATAGAGCGCCGGATGAAGAGGAATGGATGATGGGAAGCATGGAGGAAGATGAAGAAAACAACAGTGGAAGCCATCCAAGGAAGAAGCTACGTTTAACAAAGGAACAGTCTCATCTTCTTGAACAAAGCTTCAGACAAAACCATACCTTAAACCCAAAACAAAAGGAGACTCTTGCGGAAGTGCTGAAGCTGAAGCCAAGGCAGGTTGAGGTTTGGTTTCAGAACCGAAGGGCCAGGAGCAAGCTGAAGCAGACCGAGATGGAGTGCGAGTATCTGAAGAGATGGTTCGGGCTCTTGACGGAGCAAAACAAGAAACTGCAGAAGGAGGTGGAGGAGCTGAGGGCGATGAAGGTGGCGCCCCCGACGGTGATTTCACCACACAGCTGCGAGCCGCTGCCGGCGTCGAACCTCACAATGTGTCCACGCTGCGAGCGCGTGACCACTACCACCCTCGACAAGACCCGCATTGTCGTTTAA MAVLPTNSSRLDLTISVPGFTSFSSSPLPPSAVRDLDMNRAPDEEEWMMGSMEEDEENNSGSHPRKKLRLTKEQSHLLEQSFRQNHTLNPKQKETLAEVLKLKPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGLLTEQNKKLQKEVEELRAMKVAPPTVISPHSCEPLPASNLTMCPRCERVTTTTLDKTRIVV Homology
BLAST of Cp4.1LG01g06250 vs. ExPASy Swiss-Prot
Match: Q9XH38 (Homeobox-leucine zipper protein HOX3 OS=Oryza sativa subsp. indica OX=39946 GN=HOX3 PE=1 SV=1) HSP 1 Score: 222.6 bits (566), Expect = 3.8e-57 Identity = 126/196 (64.29%), Postives = 151/196 (77.04%), Query Frame = 0
BLAST of Cp4.1LG01g06250 vs. ExPASy Swiss-Prot
Match: Q0JKX1 (Homeobox-leucine zipper protein HOX3 OS=Oryza sativa subsp. japonica OX=39947 GN=HOX3 PE=1 SV=1) HSP 1 Score: 222.6 bits (566), Expect = 3.8e-57 Identity = 126/196 (64.29%), Postives = 151/196 (77.04%), Query Frame = 0
BLAST of Cp4.1LG01g06250 vs. ExPASy Swiss-Prot
Match: Q8S9N6 (Homeobox-leucine zipper protein ATHB-17 OS=Arabidopsis thaliana OX=3702 GN=ATHB-17 PE=2 SV=1) HSP 1 Score: 217.2 bits (552), Expect = 1.6e-55 Identity = 127/198 (64.14%), Postives = 142/198 (71.72%), Query Frame = 0
BLAST of Cp4.1LG01g06250 vs. ExPASy Swiss-Prot
Match: Q8GXM7 (Homeobox-leucine zipper protein ATHB-X OS=Arabidopsis thaliana OX=3702 GN=ATHB-X PE=1 SV=1) HSP 1 Score: 194.5 bits (493), Expect = 1.1e-48 Identity = 118/192 (61.46%), Postives = 136/192 (70.83%), Query Frame = 0
BLAST of Cp4.1LG01g06250 vs. ExPASy Swiss-Prot
Match: Q01I23 (Homeobox-leucine zipper protein HOX17 OS=Oryza sativa subsp. indica OX=39946 GN=HOX17 PE=2 SV=1) HSP 1 Score: 147.9 bits (372), Expect = 1.2e-34 Identity = 92/170 (54.12%), Postives = 120/170 (70.59%), Query Frame = 0
BLAST of Cp4.1LG01g06250 vs. NCBI nr
Match: XP_022942450.1 (homeobox-leucine zipper protein HOX3-like [Cucurbita moschata] >XP_023534345.1 homeobox-leucine zipper protein HOX3-like [Cucurbita pepo subsp. pepo] >KAG7030569.1 Homeobox-leucine zipper protein HOX3 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 376 bits (965), Expect = 3.85e-131 Identity = 196/196 (100.00%), Postives = 196/196 (100.00%), Query Frame = 0
BLAST of Cp4.1LG01g06250 vs. NCBI nr
Match: XP_022976582.1 (homeobox-leucine zipper protein HOX3-like [Cucurbita maxima]) HSP 1 Score: 372 bits (955), Expect = 1.29e-129 Identity = 194/196 (98.98%), Postives = 195/196 (99.49%), Query Frame = 0
BLAST of Cp4.1LG01g06250 vs. NCBI nr
Match: KAG6599884.1 (Homeobox-leucine zipper protein HOX3, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 357 bits (916), Expect = 9.19e-124 Identity = 190/196 (96.94%), Postives = 190/196 (96.94%), Query Frame = 0
BLAST of Cp4.1LG01g06250 vs. NCBI nr
Match: XP_038893065.1 (homeobox-leucine zipper protein HOX3-like [Benincasa hispida]) HSP 1 Score: 348 bits (892), Expect = 5.17e-120 Identity = 184/197 (93.40%), Postives = 190/197 (96.45%), Query Frame = 0
BLAST of Cp4.1LG01g06250 vs. NCBI nr
Match: XP_011654500.1 (homeobox-leucine zipper protein HOX3 isoform X4 [Cucumis sativus]) HSP 1 Score: 336 bits (862), Expect = 2.00e-115 Identity = 178/198 (89.90%), Postives = 189/198 (95.45%), Query Frame = 0
BLAST of Cp4.1LG01g06250 vs. ExPASy TrEMBL
Match: A0A6J1FWC2 (homeobox-leucine zipper protein HOX3-like OS=Cucurbita moschata OX=3662 GN=LOC111447486 PE=4 SV=1) HSP 1 Score: 376 bits (965), Expect = 1.86e-131 Identity = 196/196 (100.00%), Postives = 196/196 (100.00%), Query Frame = 0
BLAST of Cp4.1LG01g06250 vs. ExPASy TrEMBL
Match: A0A6J1IG52 (homeobox-leucine zipper protein HOX3-like OS=Cucurbita maxima OX=3661 GN=LOC111476932 PE=4 SV=1) HSP 1 Score: 372 bits (955), Expect = 6.23e-130 Identity = 194/196 (98.98%), Postives = 195/196 (99.49%), Query Frame = 0
BLAST of Cp4.1LG01g06250 vs. ExPASy TrEMBL
Match: A0A0A0KJE2 (Homeobox domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G065660 PE=4 SV=1) HSP 1 Score: 336 bits (862), Expect = 9.69e-116 Identity = 178/198 (89.90%), Postives = 189/198 (95.45%), Query Frame = 0
BLAST of Cp4.1LG01g06250 vs. ExPASy TrEMBL
Match: A0A1S3BYV1 (homeobox-leucine zipper protein HOX3-like OS=Cucumis melo OX=3656 GN=LOC103495072 PE=4 SV=1) HSP 1 Score: 328 bits (842), Expect = 1.04e-112 Identity = 177/198 (89.39%), Postives = 186/198 (93.94%), Query Frame = 0
BLAST of Cp4.1LG01g06250 vs. ExPASy TrEMBL
Match: A0A6J1D7F8 (homeobox-leucine zipper protein HOX3-like OS=Momordica charantia OX=3673 GN=LOC111018328 PE=4 SV=1) HSP 1 Score: 323 bits (828), Expect = 1.81e-110 Identity = 173/196 (88.27%), Postives = 178/196 (90.82%), Query Frame = 0
BLAST of Cp4.1LG01g06250 vs. TAIR 10
Match: AT2G01430.1 (homeobox-leucine zipper protein 17 ) HSP 1 Score: 217.2 bits (552), Expect = 1.1e-56 Identity = 127/198 (64.14%), Postives = 142/198 (71.72%), Query Frame = 0
BLAST of Cp4.1LG01g06250 vs. TAIR 10
Match: AT1G70920.1 (homeobox-leucine zipper protein 18 ) HSP 1 Score: 194.5 bits (493), Expect = 7.9e-50 Identity = 118/192 (61.46%), Postives = 136/192 (70.83%), Query Frame = 0
BLAST of Cp4.1LG01g06250 vs. TAIR 10
Match: AT5G06710.1 (homeobox from Arabidopsis thaliana ) HSP 1 Score: 147.5 bits (371), Expect = 1.1e-35 Identity = 90/182 (49.45%), Postives = 118/182 (64.84%), Query Frame = 0
BLAST of Cp4.1LG01g06250 vs. TAIR 10
Match: AT2G22800.1 (Homeobox-leucine zipper protein family ) HSP 1 Score: 143.7 bits (361), Expect = 1.6e-34 Identity = 85/172 (49.42%), Postives = 115/172 (66.86%), Query Frame = 0
BLAST of Cp4.1LG01g06250 vs. TAIR 10
Match: AT2G44910.1 (homeobox-leucine zipper protein 4 ) HSP 1 Score: 142.5 bits (358), Expect = 3.6e-34 Identity = 84/167 (50.30%), Postives = 113/167 (67.66%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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