Cp4.1LG01g06170 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG01g06170
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	cell number regulator 2-like
Location	Cp4.1LG01: 326988 .. 330540 (+)
RNA-Seq Expression	Cp4.1LG01g06170
Synteny	Cp4.1LG01g06170

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATGGACCACACATACAAACATTATCTAAAACAACATTATTGTTAAAACCCAACCCAAACAAAACATCAACAAAATTTTGTCCACCTTAACTTTTTAAAAAATATGTTGTAAGAAAAAAAAACAATAAATTGGAGGACAGAAGAACTCCACAACCCAGAATTCGAAGGCAAATTTGGTAGGCTTATTTGAAGGAGAAGAAGATGTCCGGCGGTATTCCAGTGAATGCAGGCAACGGAATGCAATGGTCCACTGGCCTCTGTGACTGCTTCGACGACATTGGATCATGTAAATTCGTTCTCCTTCTCCATCTTTATTAATTACAATCATTCTTATTCTCTCCTCTTTCATCTCATTATTTATGTAATATTTTCTCATTCTTATATTTAATAATTAGAATTTTTATATTTCAACGAGTTGAATTATATTTATGAATTTAATTGACAGGTTGTTGTACGATTTGGTGTCCATGTGTGCCTTTCGGGAGAGCGGCCGAGATTATTGATGAAGGATCAAGTTGTAAGCTTCATTACATCCATTTGTTAAACTACGTCTGATATTTAGCCGAACAGATTTTATCAAACTATAAATATGAAAATCAAAATGGGTCTAATATAAAACTCTCATAAATAGTTCGATTTTCATTTCTACCGAACCGATCCGTTCGATTCAATTCTCGATTGGGTCGAAAATTAGGGAAACCGAACTGACTATAACCTAGTAATAGTATTACAAGAAGTGGGTCTAATATTAAGTGCTTATATGTTTATGGGTGTGTGTGCAGCTTGTTTGGGTCAGGCATCGATTTTCACTGTGATAGCTTGCTTAACGCCCTGTATATGCCTTTATACTTGCTACTATCGTTCTCGATTGAGGGCTAAGTATCAACTTCAAGAAACTCCTTGCAACGATTGTTGTGTTCACTTTTGTTGTCTGGGCTGTGCAATGTGTCAAGAGTATCGTGAGCTCAAGAATCGTGGTTTCGACATGCATATTGGTAATCTCAATCTCTTCAACTTTCAAAAGTGTTTCAAATTTTAAGCTAAAAAATACTCTCATGGTTAGTACACACGTTACTTCCTCGTTTAAAAAATACTGCTGAACCTTCTAAAATAATATTAATATTTTTAAACTTAAAAAAGAATTAAAAGTTTTGAGATAATCTTATTAAAAGGGTATTTTTAAATTTTGAGGATGTTTGAACCATTTCCAAAGGTAATGTTAAGTATACTATTAAAAATTTAAAAATATTGTTGGAACTTTTGAAAGTTTAAAGATATTTTCATTAATTTAGTCTATGTTACGAAAATGATGATATTAAACATTGTGCTCAGGTTGGCAAGGAAACATGCAGAAACAAAACCAAGGATTAGAGATCCCGCCCGTGGTCGAAGGACAAATGAAACGTTGAAGCTTGAAAGACTTTTAAAAAAAAAAAAGAATGGTTGTTTCCTGTTTGCATTTCGTTGTCTGCGTCTTTTTATTGAGTTCCTCTTTTCTAGTGTGTTGGTTTGTGCATGTCAAGTTTCAATGCAGTATGTAAGTTCAGATGTCAATTGTTTGGATTGAATTTCCAGTTCATTTAAGACCAATAAATAATACCAATGTTCGAGTATGTGATTGAGAAACTCTAGATGTCATCTTCAAACTTTTAAATTTTCTAGTTCAATTTCTTCGGGGCATAACGACGATAGTTACACAATAAGTCACAAATAATCATTAGATTTTTCTCTCTATAAAATCCAAATTATGAACACTCATCGAACTCGAACTAATATATAGCCACATTAACCGACCGATCCCCACCTGTCGACCCTTGGCAATACAAAACTGGTTAAATATGCTACAATAGCATGGAAGCCAAGGGAAGCAGCAGTTTGACGATCCCAAACTGTGATGGAGATCATGCATGAATACAAATACACAAATGCTAGCAAGCAGCATCACAAGAACGCCAAAGTCATTAATAAAACACAAAGGATGGTTGAACTTGTGTAAGGGATGGTACCATGGAGATGCTTTGGAAGGCAGCCACCAGCTGAATCAGAAGAATTTGAGGATGGAGCCAGAGATGTGCTGTTTACTAAAGTGCCATTACTTCCACTACTGCATTGGACAAAAATACGAGGACACAACAGTCAGGAAGAGTAGTCACAGACATAGTTCGGTATATAGATATTTAAGAGTCGTTCGCGGTTACCTTCCTGGAAATATACACGTACCGTGACCTGCAACAAGAAACATCAAACCGAACATTAGCAACCATATCAAATCATTAGCAATCATTCAAGATTTCATACTTGGGTTTGTGGTGGTGATGATAGCCACTCCTTTAAAATCACAGGTCCCTGGAGACTTGGCCATTTTCTGGTAATAAGCATTGAAAGCATAGGTTGAATGGGCTATAACATTATCTGGTTGATAACATGCCTGCCCCTGCAACAGCGGGGAACAATCGACTTTCCCCGGTCCACACGCCCAATCCAGTGCTGCTTGCAGCAGCCTACGATCAGCACCGTCTCGTGCAACACAGAACGTTTGGTTTGTGGTATCATTTGCCAAAACAGCACCAGCACCAGTCAAGTGCAAGGTATAAACTGGCATTCCATTAGAATTGAAGAGACCCCAATTCTTTTCTGAGACTGAACCAGGTCTTAAATCCTCATTGTAGAGCTCATATATGTAGGTACTAACAGGAACACCCGGATGCTTAGGCGTTCCAGTGTTGTTAAGAACATGTCTAATTAAGTTGCTATTGTAAGTGTTAGCATTATCCAAAGTTGCATCTGGCTCCGATGCATCGCCCTTGGATGGCCAGCCTGACTCCGTAACAACGACTCGTATGTTCGTGAAGTTTAAATCAGACATTGCGAAATAGGCAGCATCAACAACCGCATCAAAGACATTAGTATAGTGCAATAGGGTATTGGCGTCAACAGCCTCCTTGGTTGGAGGGAGGGGCCGGAAAAGTGCATAGTCTAGAGGAATCACACCATTTGATTGCATGTAATCATAATAAGGATAAACATTAAGCATGAGATAAGAGCCAGTGGACTGCAAGAATTGAAGTAGAGGAACCATGACAGGGTCCCATGAACGGTTAAAGAAGGCCTGTGATGGAGGGAAGGAGTCAAGAATAATGGAAGAAGAATGCGGGGTAGAAACTTTGATTTGGCGATCCAGATTGGATGCAAGGAGAGCAGAGTGAATGAATTTGAGAGCCGATACAAGGATTGGGGCAGCATTTGGAAGAGTGGTAAGAACATCAGAGCCAATGGCTATGCCTGTGATGTTGGTGGCAGGAACATGGGCAATGACATTCCGAGCAACCCAGTTGGCTGCAGTCGCATTGGATTGGCCAATTCCAAGAAGTTGGTCATTGGGTACAGAAACAATGACTTGAATGCCTGTGTTGGCAAGAGCAAGAAGCATAGCCCGGTCGGCATCATATAACCTGAGATGTCTAATATTTTGAGCTTTGAGAAGTGCAACTACCTGAGTGGGGTTGGGCATATCAGAAAGATCCATACCAAGGTTTACACCAATGAACGCATC

mRNA sequence

TATGGACCACACATACAAACATTATCTAAAACAACATTATTGTTAAAACCCAACCCAAACAAAACATCAACAAAATTTTGTCCACCTTAACTTTTTAAAAAATATGTTGTAAGAAAAAAAAACAATAAATTGGAGGACAGAAGAACTCCACAACCCAGAATTCGAAGGCAAATTTGGTAGGCTTATTTGAAGGAGAAGAAGATGTCCGGCGGTATTCCAGTGAATGCAGGCAACGGAATGCAATGGTCCACTGGCCTCTGTGACTGCTTCGACGACATTGGATCATGTTGTTGTACGATTTGGTGTCCATGTGTGCCTTTCGGGAGAGCGGCCGAGATTATTGATGAAGGATCAAGTTCTTGTTTGGGTCAGGCATCGATTTTCACTGTGATAGCTTGCTTAACGCCCTGTATATGCCTTTATACTTGCTACTATCGTTCTCGATTGAGGGCTAAGTATCAACTTCAAGAAACTCCTTGCAACGATTGTTGTGTTCACTTTTGTTGTCTGGGCTGTGCAATGTGTCAAGAGTATCGTGAGCTCAAGAATCGTGGTTTCGACATGCATATTGGTTGGCAAGGAAACATGCAGAAACAAAACCAAGGATTAGAGATCCCGCCCGTGGTCGAAGGACAAATGAAACGTTGAAGCTTGAAAGACTTTTAAAAAAAAAAAAGAATGGTTGTTTCCTGTTTGCATTTCGTTGTCTGCGTCTTTTTATTGAGTTCCTCTTTTCTAGTGTGTTGGTTTGTGCATGTCAAGTTTCAATGCAGTATGTAAGTTCAGATGTCAATTGTTTGGATTGAATTTCCAGTTCATTTAAGACCAATAAATAATACCAATGTTCGAGTATGTGATTGAGAAACTCTAGATGTCATCTTCAAACTTTTAAATTTTCTAGTTCAATTTCTTCGGGGCATAACGACGATAGTTACACAATAAGTCACAAATAATCATTAGATTTTTCTCTCTATAAAATCCAAATTATGAACACTCATCGAACTCGAACTAATATATAGCCACATTAACCGACCGATCCCCACCTGTCGACCCTTGGCAATACAAAACTGGTTAAATATGCTACAATAGCATGGAAGCCAAGGGAAGCAGCAGTTTGACGATCCCAAACTGTGATGGAGATCATGCATGAATACAAATACACAAATGCTAGCAAGCAGCATCACAAGAACGCCAAAGTCATTAATAAAACACAAAGGATGGTTGAACTTGTGTAAGGGATGGTACCATGGAGATGCTTTGGAAGGCAGCCACCAGCTGAATCAGAAGAATTTGAGGATGGAGCCAGAGATGTGCTGTTTACTAAAGTGCCATTACTTCCACTACTGCATTGGACAAAAATACGAGGACACAACAGTCAGGAAGAGTAGTCACAGACATAGTTCGGTATATAGATATTTAAGAGTCGTTCGCGGTTACCTTCCTGGAAATATACACGTACCGTGACCTGCAACAAGAAACATCAAACCGAACATTAGCAACCATATCAAATCATTAGCAATCATTCAAGATTTCATACTTGGGTTTGTGGTGGTGATGATAGCCACTCCTTTAAAATCACAGGTCCCTGGAGACTTGGCCATTTTCTGGTAATAAGCATTGAAAGCATAGGTTGAATGGGCTATAACATTATCTGGTTGATAACATGCCTGCCCCTGCAACAGCGGGGAACAATCGACTTTCCCCGGTCCACACGCCCAATCCAGTGCTGCTTGCAGCAGCCTACGATCAGCACCGTCTCGTGCAACACAGAACGTTTGGTTTGTGGTATCATTTGCCAAAACAGCACCAGCACCAGTCAAGTGCAAGGTATAAACTGGCATTCCATTAGAATTGAAGAGACCCCAATTCTTTTCTGAGACTGAACCAGGTCTTAAATCCTCATTGTAGAGCTCATATATGTAGGTACTAACAGGAACACCCGGATGCTTAGGCGTTCCAGTGTTGTTAAGAACATGTCTAATTAAGTTGCTATTGTAAGTGTTAGCATTATCCAAAGTTGCATCTGGCTCCGATGCATCGCCCTTGGATGGCCAGCCTGACTCCGTAACAACGACTCGTATGTTCGTGAAGTTTAAATCAGACATTGCGAAATAGGCAGCATCAACAACCGCATCAAAGACATTAGTATAGTGCAATAGGGTATTGGCGTCAACAGCCTCCTTGGTTGGAGGGAGGGGCCGGAAAAGTGCATAGTCTAGAGGAATCACACCATTTGATTGCATGTAATCATAATAAGGATAAACATTAAGCATGAGATAAGAGCCAGTGGACTGCAAGAATTGAAGTAGAGGAACCATGACAGGGTCCCATGAACGGTTAAAGAAGGCCTGTGATGGAGGGAAGGAGTCAAGAATAATGGAAGAAGAATGCGGGGTAGAAACTTTGATTTGGCGATCCAGATTGGATGCAAGGAGAGCAGAGTGAATGAATTTGAGAGCCGATACAAGGATTGGGGCAGCATTTGGAAGAGTGGTAAGAACATCAGAGCCAATGGCTATGCCTGTGATGTTGGTGGCAGGAACATGGGCAATGACATTCCGAGCAACCCAGTTGGCTGCAGTCGCATTGGATTGGCCAATTCCAAGAAGTTGGTCATTGGGTACAGAAACAATGACTTGAATGCCTGTGTTGGCAAGAGCAAGAAGCATAGCCCGGTCGGCATCATATAACCTGAGATGTCTAATATTTTGAGCTTTGAGAAGTGCAACTACCTGAGTGGGGTTGGGCATATCAGAAAGATCCATACCAAGGTTTACACCAATGAACGCATC

Coding sequence (CDS)

ATGTCCGGCGGTATTCCAGTGAATGCAGGCAACGGAATGCAATGGTCCACTGGCCTCTGTGACTGCTTCGACGACATTGGATCATGTTGTTGTACGATTTGGTGTCCATGTGTGCCTTTCGGGAGAGCGGCCGAGATTATTGATGAAGGATCAAGTTCTTGTTTGGGTCAGGCATCGATTTTCACTGTGATAGCTTGCTTAACGCCCTGTATATGCCTTTATACTTGCTACTATCGTTCTCGATTGAGGGCTAAGTATCAACTTCAAGAAACTCCTTGCAACGATTGTTGTGTTCACTTTTGTTGTCTGGGCTGTGCAATGTGTCAAGAGTATCGTGAGCTCAAGAATCGTGGTTTCGACATGCATATTGGTTGGCAAGGAAACATGCAGAAACAAAACCAAGGATTAGAGATCCCGCCCGTGGTCGAAGGACAAATGAAACGTTGA

Protein sequence

MSGGIPVNAGNGMQWSTGLCDCFDDIGSCCCTIWCPCVPFGRAAEIIDEGSSSCLGQASIFTVIACLTPCICLYTCYYRSRLRAKYQLQETPCNDCCVHFCCLGCAMCQEYRELKNRGFDMHIGWQGNMQKQNQGLEIPPVVEGQMKR

Homology

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BLAST of Cp4.1LG01g06170 vs. ExPASy Swiss-Prot
Match: B6TYV8 (Cell number regulator 2 OS=Zea mays OX=4577 GN=CNR2 PE=2 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 3.1e-43
Identity = 74/135 (54.81%), Postives = 99/135 (73.33%), Query Frame = 0


Query: 15  WSTGLCDCFDDIGSCCCTIWCPCVPFGRAAEIIDEGSSSCLGQASIFTVIACLTPCICLY 74
           WSTGLC+CFDD  +CC T  CPC+ FG+ AEIID GS+SC    +++ ++  LT C C+Y
Sbjct: 47  WSTGLCNCFDDCHNCCVTCVCPCITFGQTAEIIDRGSTSCGTSGALYALVMLLTGCQCVY 106

Query: 75  TCYYRSRLRAKYQLQETPCNDCCVHFCCLGCAMCQEYRELKNRGFDMHIGWQGNMQKQNQ 134
           +C+YR+++RA+Y LQ +PC+DCCVH CC  CA+CQEYRELK RGFDM IGW  NM++Q +
Sbjct: 107 SCFYRAKMRAQYGLQVSPCSDCCVHCCCQCCALCQEYRELKKRGFDMSIGWHANMERQGR 166

Query: 135 -GLEIPPVVEGQMKR 149
               +PP +   M R
Sbjct: 167 AAAAVPPHMHPGMTR 181

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BLAST of Cp4.1LG01g06170 vs. ExPASy Swiss-Prot
Match: D9HP25 (Cell number regulator 9 OS=Zea mays OX=4577 GN=CNR9 PE=2 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 3.2e-40
Identity = 77/153 (50.33%), Postives = 99/153 (64.71%), Query Frame = 0


Query: 4   GIPVNAGNGM-------QWSTGLCDCFDDIGSCCCTIWCPCVPFGRAAEIIDEGSSSCLG 63
           GIP+++   +       +WS+GLC C DD G CC T WCPC+ FGR AEI+D G++SC  
Sbjct: 23  GIPISSPGAVAVGPVVGKWSSGLCACSDDCGLCCLTCWCPCITFGRIAEIVDRGATSCGV 82

Query: 64  QASIFTVIACLTPCICLYTCYYRSRLRAKYQLQETPCNDCCVHFCCLGCAMCQEYRELKN 123
             +I+T++AC T C  +Y+C YRSR+RA+  L E  C DCCVHFCC  CA+ Q+YRELK 
Sbjct: 83  AGTIYTLLACFTGCHWIYSCTYRSRMRAQLGLPEACCCDCCVHFCCEPCALSQQYRELKA 142

Query: 124 RGFDMHIGWQGNMQKQNQGLEI-PPVVEGQMKR 149
           RGFD  +GW  N QK      + PP  EG M R
Sbjct: 143 RGFDPDLGWDVNAQKAAAAAAMYPPPAEGMMIR 175

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BLAST of Cp4.1LG01g06170 vs. ExPASy Swiss-Prot
Match: Q9LQU4 (Protein PLANT CADMIUM RESISTANCE 2 OS=Arabidopsis thaliana OX=3702 GN=PCR2 PE=1 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 3.2e-40
Identity = 69/138 (50.00%), Postives = 98/138 (71.01%), Query Frame = 0


Query: 14  QWSTGLCDCFDDIGSCCCTIWCPCVPFGRAAEIIDEGSSSCLGQASIFTVIACLTPCICL 73
           +WSTG CDCF D  +CC T WCPC+ FG+ AEI+D GS+SC    +++ +IA +T C C+
Sbjct: 15  EWSTGFCDCFSDCKNCCITFWCPCITFGQVAEIVDRGSTSCGTAGALYALIAVVTGCACI 74

Query: 74  YTCYYRSRLRAKYQLQETPCNDCCVHFCCLGCAMCQEYRELKNRGFDMHIGWQGNMQK-Q 133
           Y+C+YR ++RA+Y ++   C DC  HFCC  C++ Q+YRELK+RG+DM +GW GN+++ Q
Sbjct: 75  YSCFYRGKMRAQYNIKGDDCTDCLKHFCCELCSLTQQYRELKHRGYDMSLGWAGNVERQQ 134

Query: 134 NQG--LEIPPVVEGQMKR 149
           NQG      PV +G M R
Sbjct: 135 NQGGVAMGAPVFQGGMTR 152

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BLAST of Cp4.1LG01g06170 vs. ExPASy Swiss-Prot
Match: D9HP23 (Cell number regulator 7 OS=Zea mays OX=4577 GN=CNR7 PE=2 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 2.1e-39
Identity = 76/153 (49.67%), Postives = 99/153 (64.71%), Query Frame = 0


Query: 4   GIPVN----AGNGMQWSTGLCDCFDDIGSCCCTIWCPCVPFGRAAEIIDEGSSSCLGQAS 63
           GIP++    A    QWS+GLC CFDD G CC T WCPCV FGR AE++D G++SC    +
Sbjct: 25  GIPISSPGPAVAASQWSSGLCACFDDCGLCCMTCWCPCVTFGRIAEVVDRGATSCAAAGA 84

Query: 64  IFTVIACLT--PCICLYTCYYRSRLRAKYQLQETPCNDCCVHFCCLGCAMCQEYRELKNR 123
           I+T++AC T   C  +Y+C YRS++RA+  L +  C DCCVHFCC  CA+CQ+YREL+ R
Sbjct: 85  IYTLLACFTGFQCHWIYSCTYRSKMRAQLGLPDVGCCDCCVHFCCEPCALCQQYRELRAR 144

Query: 124 GFDMHIGWQGNMQK---QNQGLEI---PPVVEG 145
           G D  +GW  N QK    N G  +   PP  +G
Sbjct: 145 GLDPALGWDVNAQKAANNNAGAGMTMYPPTAQG 177

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BLAST of Cp4.1LG01g06170 vs. ExPASy Swiss-Prot
Match: D9HP26 (Cell number regulator 10 OS=Zea mays OX=4577 GN=CNR10 PE=2 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 1.8e-38
Identity = 71/142 (50.00%), Postives = 92/142 (64.79%), Query Frame = 0


Query: 4   GIPVNA-GNGMQWSTGLCDCFDDIGSCCCTIWCPCVPFGRAAEIIDEGSSSCLGQASIFT 63
           G PV       QWS+GL DCFDD G CC T WCPC+ FGR AEI+D G++SC    +++ 
Sbjct: 19  GFPVGGPAASSQWSSGLLDCFDDCGLCCLTCWCPCITFGRVAEIVDRGATSCGTAGALYA 78

Query: 64  VIACLTPCICLYTCYYRSRLRAKYQLQETPCNDCCVHFCCLGCAMCQEYRELKNRGFDMH 123
           V+A  T C  +Y+C YR+++RA+  L ETPC DC VHFCC  CA+CQ+Y+ELK RGFD  
Sbjct: 79  VLAYFTGCQWIYSCTYRAKMRAQLGLPETPCCDCLVHFCCEPCALCQQYKELKARGFDPV 138

Query: 124 IGWQGNMQKQNQGLEIPPVVEG 145
           +GW  N         +PP  +G
Sbjct: 139 LGWDRN------ATMLPPSAQG 154

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BLAST of Cp4.1LG01g06170 vs. NCBI nr
Match: XP_023527032.1 (cell number regulator 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 330 bits (847), Expect = 9.85e-115
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0


Query: 1   MSGGIPVNAGNGMQWSTGLCDCFDDIGSCCCTIWCPCVPFGRAAEIIDEGSSSCLGQASI 60
           MSGGIPVNAGNGMQWSTGLCDCFDDIGSCCCTIWCPCVPFGRAAEIIDEGSSSCLGQASI
Sbjct: 1   MSGGIPVNAGNGMQWSTGLCDCFDDIGSCCCTIWCPCVPFGRAAEIIDEGSSSCLGQASI 60

Query: 61  FTVIACLTPCICLYTCYYRSRLRAKYQLQETPCNDCCVHFCCLGCAMCQEYRELKNRGFD 120
           FTVIACLTPCICLYTCYYRSRLRAKYQLQETPCNDCCVHFCCLGCAMCQEYRELKNRGFD
Sbjct: 61  FTVIACLTPCICLYTCYYRSRLRAKYQLQETPCNDCCVHFCCLGCAMCQEYRELKNRGFD 120

Query: 121 MHIGWQGNMQKQNQGLEIPPVVEGQMKR 148
           MHIGWQGNMQKQNQGLEIPPVVEGQMKR
Sbjct: 121 MHIGWQGNMQKQNQGLEIPPVVEGQMKR 148

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BLAST of Cp4.1LG01g06170 vs. NCBI nr
Match: XP_022942628.1 (cell number regulator 2-like isoform X1 [Cucurbita moschata] >KAG6599908.1 Protein PLANT CADMIUM RESISTANCE 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 320 bits (819), Expect = 1.84e-110
Identity = 142/148 (95.95%), Postives = 144/148 (97.30%), Query Frame = 0


Query: 1   MSGGIPVNAGNGMQWSTGLCDCFDDIGSCCCTIWCPCVPFGRAAEIIDEGSSSCLGQASI 60
           MSGGIPVNAGNG  WSTGLCDCFDDIGSCCCTIWCPCVPFGRAAEIIDEGSSSCLGQASI
Sbjct: 1   MSGGIPVNAGNGTPWSTGLCDCFDDIGSCCCTIWCPCVPFGRAAEIIDEGSSSCLGQASI 60

Query: 61  FTVIACLTPCICLYTCYYRSRLRAKYQLQETPCNDCCVHFCCLGCAMCQEYRELKNRGFD 120
           FTVI C TPCICLYTCYYRSRLRAKYQLQETPCNDCCVHFCCLGCAMCQEYRELKNRGFD
Sbjct: 61  FTVITCFTPCICLYTCYYRSRLRAKYQLQETPCNDCCVHFCCLGCAMCQEYRELKNRGFD 120

Query: 121 MHIGWQGNMQKQNQGLEIPPVVEGQMKR 148
           MHIGWQGN+QKQN+GLEIPPVVEGQMKR
Sbjct: 121 MHIGWQGNVQKQNKGLEIPPVVEGQMKR 148

[Close]

BLAST of Cp4.1LG01g06170 vs. NCBI nr
Match: XP_022942629.1 (cell number regulator 2-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 315 bits (808), Expect = 8.78e-109
Identity = 140/148 (94.59%), Postives = 143/148 (96.62%), Query Frame = 0


Query: 1   MSGGIPVNAGNGMQWSTGLCDCFDDIGSCCCTIWCPCVPFGRAAEIIDEGSSSCLGQASI 60
           MSGGIPVNAGNG  WSTGLCDCFDD+ SCCCTIWCPCVPFGRAAEIIDEGSSSCLGQASI
Sbjct: 1   MSGGIPVNAGNGTPWSTGLCDCFDDMRSCCCTIWCPCVPFGRAAEIIDEGSSSCLGQASI 60

Query: 61  FTVIACLTPCICLYTCYYRSRLRAKYQLQETPCNDCCVHFCCLGCAMCQEYRELKNRGFD 120
           FTVI C TPCICLYTCYYRSRLRAKYQLQETPCNDCCVHFCCLGCAMCQEYRELKNRGFD
Sbjct: 61  FTVITCFTPCICLYTCYYRSRLRAKYQLQETPCNDCCVHFCCLGCAMCQEYRELKNRGFD 120

Query: 121 MHIGWQGNMQKQNQGLEIPPVVEGQMKR 148
           MHIGWQGN+QKQN+GLEIPPVVEGQMKR
Sbjct: 121 MHIGWQGNVQKQNKGLEIPPVVEGQMKR 148

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BLAST of Cp4.1LG01g06170 vs. NCBI nr
Match: XP_023001851.1 (cell number regulator 2-like [Cucurbita maxima])

HSP 1 Score: 310 bits (794), Expect = 1.20e-106
Identity = 138/148 (93.24%), Postives = 143/148 (96.62%), Query Frame = 0


Query: 1   MSGGIPVNAGNGMQWSTGLCDCFDDIGSCCCTIWCPCVPFGRAAEIIDEGSSSCLGQASI 60
           MSGGIPVNAGNG  WSTGLCDCFDDIGSCCCTIWCPCVPFGRAAEIIDEGSSSCLGQASI
Sbjct: 1   MSGGIPVNAGNGTPWSTGLCDCFDDIGSCCCTIWCPCVPFGRAAEIIDEGSSSCLGQASI 60

Query: 61  FTVIACLTPCICLYTCYYRSRLRAKYQLQETPCNDCCVHFCCLGCAMCQEYRELKNRGFD 120
           FTVI+C TPCICLYTC+YRS LRAKYQLQ+TPCNDCCVHF CLGCAMCQEYRELKNRGFD
Sbjct: 61  FTVISCFTPCICLYTCHYRSLLRAKYQLQQTPCNDCCVHFWCLGCAMCQEYRELKNRGFD 120

Query: 121 MHIGWQGNMQKQNQGLEIPPVVEGQMKR 148
           MHIGWQGN+QKQN+GLEIPPVVEGQMKR
Sbjct: 121 MHIGWQGNVQKQNKGLEIPPVVEGQMKR 148

[Close]

BLAST of Cp4.1LG01g06170 vs. NCBI nr
Match: XP_022942630.1 (cell number regulator 2-like isoform X3 [Cucurbita moschata])

HSP 1 Score: 302 bits (774), Expect = 1.35e-103
Identity = 133/148 (89.86%), Postives = 141/148 (95.27%), Query Frame = 0


Query: 1   MSGGIPVNAGNGMQWSTGLCDCFDDIGSCCCTIWCPCVPFGRAAEIIDEGSSSCLGQASI 60
           MSGG P+NA NG  WSTGLCDCFDD+GSCCCT WCPCVPFG+AAEIIDEGS+SCLGQASI
Sbjct: 1   MSGGTPMNAPNGTPWSTGLCDCFDDMGSCCCTFWCPCVPFGQAAEIIDEGSTSCLGQASI 60

Query: 61  FTVIACLTPCICLYTCYYRSRLRAKYQLQETPCNDCCVHFCCLGCAMCQEYRELKNRGFD 120
           FTVI+C TPCICLYTC+YRSRLRAKYQLQETPCNDCCVHF CLGCAMCQEYRELKNRGFD
Sbjct: 61  FTVISCFTPCICLYTCHYRSRLRAKYQLQETPCNDCCVHFWCLGCAMCQEYRELKNRGFD 120

Query: 121 MHIGWQGNMQKQNQGLEIPPVVEGQMKR 148
           MHIGWQGN+QKQN+GLEIPPVVEGQMKR
Sbjct: 121 MHIGWQGNVQKQNKGLEIPPVVEGQMKR 148

[Close]

BLAST of Cp4.1LG01g06170 vs. ExPASy TrEMBL
Match: A0A6J1FVA4 (cell number regulator 2-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111447610 PE=4 SV=1)

HSP 1 Score: 320 bits (819), Expect = 8.92e-111
Identity = 142/148 (95.95%), Postives = 144/148 (97.30%), Query Frame = 0


Query: 1   MSGGIPVNAGNGMQWSTGLCDCFDDIGSCCCTIWCPCVPFGRAAEIIDEGSSSCLGQASI 60
           MSGGIPVNAGNG  WSTGLCDCFDDIGSCCCTIWCPCVPFGRAAEIIDEGSSSCLGQASI
Sbjct: 1   MSGGIPVNAGNGTPWSTGLCDCFDDIGSCCCTIWCPCVPFGRAAEIIDEGSSSCLGQASI 60

Query: 61  FTVIACLTPCICLYTCYYRSRLRAKYQLQETPCNDCCVHFCCLGCAMCQEYRELKNRGFD 120
           FTVI C TPCICLYTCYYRSRLRAKYQLQETPCNDCCVHFCCLGCAMCQEYRELKNRGFD
Sbjct: 61  FTVITCFTPCICLYTCYYRSRLRAKYQLQETPCNDCCVHFCCLGCAMCQEYRELKNRGFD 120

Query: 121 MHIGWQGNMQKQNQGLEIPPVVEGQMKR 148
           MHIGWQGN+QKQN+GLEIPPVVEGQMKR
Sbjct: 121 MHIGWQGNVQKQNKGLEIPPVVEGQMKR 148

[Close]

BLAST of Cp4.1LG01g06170 vs. ExPASy TrEMBL
Match: A0A6J1FRV9 (cell number regulator 2-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111447610 PE=4 SV=1)

HSP 1 Score: 315 bits (808), Expect = 4.25e-109
Identity = 140/148 (94.59%), Postives = 143/148 (96.62%), Query Frame = 0


Query: 1   MSGGIPVNAGNGMQWSTGLCDCFDDIGSCCCTIWCPCVPFGRAAEIIDEGSSSCLGQASI 60
           MSGGIPVNAGNG  WSTGLCDCFDD+ SCCCTIWCPCVPFGRAAEIIDEGSSSCLGQASI
Sbjct: 1   MSGGIPVNAGNGTPWSTGLCDCFDDMRSCCCTIWCPCVPFGRAAEIIDEGSSSCLGQASI 60

Query: 61  FTVIACLTPCICLYTCYYRSRLRAKYQLQETPCNDCCVHFCCLGCAMCQEYRELKNRGFD 120
           FTVI C TPCICLYTCYYRSRLRAKYQLQETPCNDCCVHFCCLGCAMCQEYRELKNRGFD
Sbjct: 61  FTVITCFTPCICLYTCYYRSRLRAKYQLQETPCNDCCVHFCCLGCAMCQEYRELKNRGFD 120

Query: 121 MHIGWQGNMQKQNQGLEIPPVVEGQMKR 148
           MHIGWQGN+QKQN+GLEIPPVVEGQMKR
Sbjct: 121 MHIGWQGNVQKQNKGLEIPPVVEGQMKR 148

[Close]

BLAST of Cp4.1LG01g06170 vs. ExPASy TrEMBL
Match: A0A6J1KJU3 (cell number regulator 2-like OS=Cucurbita maxima OX=3661 GN=LOC111495886 PE=4 SV=1)

HSP 1 Score: 310 bits (794), Expect = 5.81e-107
Identity = 138/148 (93.24%), Postives = 143/148 (96.62%), Query Frame = 0


Query: 1   MSGGIPVNAGNGMQWSTGLCDCFDDIGSCCCTIWCPCVPFGRAAEIIDEGSSSCLGQASI 60
           MSGGIPVNAGNG  WSTGLCDCFDDIGSCCCTIWCPCVPFGRAAEIIDEGSSSCLGQASI
Sbjct: 1   MSGGIPVNAGNGTPWSTGLCDCFDDIGSCCCTIWCPCVPFGRAAEIIDEGSSSCLGQASI 60

Query: 61  FTVIACLTPCICLYTCYYRSRLRAKYQLQETPCNDCCVHFCCLGCAMCQEYRELKNRGFD 120
           FTVI+C TPCICLYTC+YRS LRAKYQLQ+TPCNDCCVHF CLGCAMCQEYRELKNRGFD
Sbjct: 61  FTVISCFTPCICLYTCHYRSLLRAKYQLQQTPCNDCCVHFWCLGCAMCQEYRELKNRGFD 120

Query: 121 MHIGWQGNMQKQNQGLEIPPVVEGQMKR 148
           MHIGWQGN+QKQN+GLEIPPVVEGQMKR
Sbjct: 121 MHIGWQGNVQKQNKGLEIPPVVEGQMKR 148

[Close]

BLAST of Cp4.1LG01g06170 vs. ExPASy TrEMBL
Match: A0A6J1FWN1 (cell number regulator 2-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111447610 PE=4 SV=1)

HSP 1 Score: 302 bits (774), Expect = 6.53e-104
Identity = 133/148 (89.86%), Postives = 141/148 (95.27%), Query Frame = 0


Query: 1   MSGGIPVNAGNGMQWSTGLCDCFDDIGSCCCTIWCPCVPFGRAAEIIDEGSSSCLGQASI 60
           MSGG P+NA NG  WSTGLCDCFDD+GSCCCT WCPCVPFG+AAEIIDEGS+SCLGQASI
Sbjct: 1   MSGGTPMNAPNGTPWSTGLCDCFDDMGSCCCTFWCPCVPFGQAAEIIDEGSTSCLGQASI 60

Query: 61  FTVIACLTPCICLYTCYYRSRLRAKYQLQETPCNDCCVHFCCLGCAMCQEYRELKNRGFD 120
           FTVI+C TPCICLYTC+YRSRLRAKYQLQETPCNDCCVHF CLGCAMCQEYRELKNRGFD
Sbjct: 61  FTVISCFTPCICLYTCHYRSRLRAKYQLQETPCNDCCVHFWCLGCAMCQEYRELKNRGFD 120

Query: 121 MHIGWQGNMQKQNQGLEIPPVVEGQMKR 148
           MHIGWQGN+QKQN+GLEIPPVVEGQMKR
Sbjct: 121 MHIGWQGNVQKQNKGLEIPPVVEGQMKR 148

[Close]

BLAST of Cp4.1LG01g06170 vs. ExPASy TrEMBL
Match: A0A6J1FQT4 (cell number regulator 2-like isoform X5 OS=Cucurbita moschata OX=3662 GN=LOC111447610 PE=4 SV=1)

HSP 1 Score: 301 bits (772), Expect = 1.32e-103
Identity = 132/148 (89.19%), Postives = 140/148 (94.59%), Query Frame = 0


Query: 1   MSGGIPVNAGNGMQWSTGLCDCFDDIGSCCCTIWCPCVPFGRAAEIIDEGSSSCLGQASI 60
           MSGG P+NA NG  WSTGLCDCFDD+GSCCCT WCPCVPFG+AAEIIDEGS+SCLGQASI
Sbjct: 1   MSGGTPMNAPNGTPWSTGLCDCFDDMGSCCCTFWCPCVPFGQAAEIIDEGSTSCLGQASI 60

Query: 61  FTVIACLTPCICLYTCYYRSRLRAKYQLQETPCNDCCVHFCCLGCAMCQEYRELKNRGFD 120
           FTVI+C TPCICLYTC+YRSRLRAKYQLQETPCNDCCVHF CLGCAMCQEYRELKNRGFD
Sbjct: 61  FTVISCFTPCICLYTCHYRSRLRAKYQLQETPCNDCCVHFWCLGCAMCQEYRELKNRGFD 120

Query: 121 MHIGWQGNMQKQNQGLEIPPVVEGQMKR 148
           MHIGWQGNMQKQN G+EIPP+VEGQMKR
Sbjct: 121 MHIGWQGNMQKQNMGIEIPPMVEGQMKR 148

[Close]

BLAST of Cp4.1LG01g06170 vs. TAIR 10
Match: AT1G14870.1 (PLANT CADMIUM RESISTANCE 2 )

HSP 1 Score: 166.0 bits (419), Expect = 2.3e-41
Identity = 69/138 (50.00%), Postives = 98/138 (71.01%), Query Frame = 0


Query: 14  QWSTGLCDCFDDIGSCCCTIWCPCVPFGRAAEIIDEGSSSCLGQASIFTVIACLTPCICL 73
           +WSTG CDCF D  +CC T WCPC+ FG+ AEI+D GS+SC    +++ +IA +T C C+
Sbjct: 15  EWSTGFCDCFSDCKNCCITFWCPCITFGQVAEIVDRGSTSCGTAGALYALIAVVTGCACI 74

Query: 74  YTCYYRSRLRAKYQLQETPCNDCCVHFCCLGCAMCQEYRELKNRGFDMHIGWQGNMQK-Q 133
           Y+C+YR ++RA+Y ++   C DC  HFCC  C++ Q+YRELK+RG+DM +GW GN+++ Q
Sbjct: 75  YSCFYRGKMRAQYNIKGDDCTDCLKHFCCELCSLTQQYRELKHRGYDMSLGWAGNVERQQ 134

Query: 134 NQG--LEIPPVVEGQMKR 149
           NQG      PV +G M R
Sbjct: 135 NQGGVAMGAPVFQGGMTR 152

[Close]

BLAST of Cp4.1LG01g06170 vs. TAIR 10
Match: AT5G35525.1 (PLAC8 family protein )

HSP 1 Score: 158.7 bits (400), Expect = 3.6e-39
Identity = 69/138 (50.00%), Postives = 95/138 (68.84%), Query Frame = 0


Query: 14  QWSTGLCDCFDDIGSCCCTIWCPCVPFGRAAEIIDEGSSSCLGQASIFTVIACLTPCICL 73
           +WSTG CDCF D  +CC T  CPC+ FG+ A+I+D G++SC    +++ ++A +T C CL
Sbjct: 15  EWSTGFCDCFSDCQNCCITWLCPCITFGQVADIVDRGNTSCGTAGALYVLLAAITGCGCL 74

Query: 74  YTCYYRSRLRAKYQLQETPCNDCCVHFCCLGCAMCQEYRELKNRGFDMHIGWQGNMQK-Q 133
           Y+C YR ++RA+Y ++   C DC  HFCC  CA+ QEYRELK+RGFDM +GW GN++K Q
Sbjct: 75  YSCIYRGKIRAQYNIRGDGCTDCLKHFCCELCALTQEYRELKHRGFDMSLGWAGNVEKQQ 134

Query: 134 NQG--LEIPPVVEGQMKR 149
           NQG      P  +G M R
Sbjct: 135 NQGGVAMGAPAFQGGMSR 152

[Close]

BLAST of Cp4.1LG01g06170 vs. TAIR 10
Match: AT1G68610.1 (PLANT CADMIUM RESISTANCE 11 )

HSP 1 Score: 156.0 bits (393), Expect = 2.4e-38
Identity = 68/120 (56.67%), Postives = 89/120 (74.17%), Query Frame = 0


Query: 15  WSTGLCDCFDDIGSCCCTIWCPCVPFGRAAEIIDEGSSSCLGQASIFTVIACLTPC--IC 74
           WST LC+C+ DI SCC T WCPCV FGR AE++D GS+SC    +++ +I  LT      
Sbjct: 19  WSTDLCECWMDINSCCLTCWCPCVAFGRIAEVVDRGSTSCGVSGAMYMIIFMLTGYGGSS 78

Query: 75  LYTCYYRSRLRAKYQLQETPCNDCCVHFCCLGCAMCQEYRELK-NRGFDMHIGWQGNMQK 132
           LY+C+YR++LRA+Y L+E PC DCCVHFCC  CA+CQEYR+L+ NR  D+ IGW GNM++
Sbjct: 79  LYSCFYRTKLRAQYNLKERPCCDCCVHFCCEPCALCQEYRQLQHNRDLDLVIGWHGNMER 138

[Close]

BLAST of Cp4.1LG01g06170 vs. TAIR 10
Match: AT1G14880.1 (PLANT CADMIUM RESISTANCE 1 )

HSP 1 Score: 153.3 bits (386), Expect = 1.5e-37
Identity = 63/123 (51.22%), Postives = 86/123 (69.92%), Query Frame = 0


Query: 14  QWSTGLCDCFDDIGSCCCTIWCPCVPFGRAAEIIDEGSSSCLGQASIFTVIACLTPCICL 73
           +WSTG CDCF D  +CC T+ CPC+ FG+ AEI+D GS SC    +++ +I  +T C  +
Sbjct: 14  EWSTGFCDCFSDCRNCCITLCCPCITFGQVAEIVDRGSKSCCAAGALYMLIDLITSCGRM 73

Query: 74  YTCYYRSRLRAKYQLQETPCNDCCVHFCCLGCAMCQEYRELKNRGFDMHIGWQGNMQK-Q 133
           Y C+Y  ++RA+Y ++   C DC  HFCC  CA+ Q+YRELK+RGFDM +GW GN +K Q
Sbjct: 74  YACFYSGKMRAQYNIKGDGCTDCLKHFCCNLCALTQQYRELKHRGFDMSLGWAGNAEKQQ 133

Query: 134 NQG 136
           NQG
Sbjct: 134 NQG 136

[Close]

BLAST of Cp4.1LG01g06170 vs. TAIR 10
Match: AT3G18470.1 (PLAC8 family protein )

HSP 1 Score: 133.7 bits (335), Expect = 1.3e-31
Identity = 57/118 (48.31%), Postives = 79/118 (66.95%), Query Frame = 0


Query: 14  QWSTGLCDCFDDIGSCCCTIWCPCVPFGRAAEIIDEGSSSCLGQASIFTVIACLTPCICL 73
           QW++GL  C +D  + C T +CPCV FGR A+I DEG + C      + +I C+    CL
Sbjct: 4   QWTSGLFSCMEDSETACLTCFCPCVTFGRIADISDEGRTGCGRCGVFYGLICCVVGLPCL 63

Query: 74  YTCYYRSRLRAKYQLQETPCNDCCVHFCCLGCAMCQEYRELKNRGFDMHIGWQGNMQK 132
           ++C YR+++R+K+ L E+P +DC  HF C  CA+CQE+RELK RG D  IGW GNMQ+
Sbjct: 64  FSCTYRTKIRSKFGLPESPTSDCVTHFFCECCALCQEHRELKTRGLDPSIGWSGNMQR 121

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g06170 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B6TYV8	3.1e-43	54.81	Cell number regulator 2 OS=Zea mays OX=4577 GN=CNR2 PE=2 SV=1	[more]
D9HP25	3.2e-40	50.33	Cell number regulator 9 OS=Zea mays OX=4577 GN=CNR9 PE=2 SV=1	[more]
Q9LQU4	3.2e-40	50.00	Protein PLANT CADMIUM RESISTANCE 2 OS=Arabidopsis thaliana OX=3702 GN=PCR2 PE=1 ...	[more]
D9HP23	2.1e-39	49.67	Cell number regulator 7 OS=Zea mays OX=4577 GN=CNR7 PE=2 SV=1	[more]
D9HP26	1.8e-38	50.00	Cell number regulator 10 OS=Zea mays OX=4577 GN=CNR10 PE=2 SV=1	[more]

BLAST of Cp4.1LG01g06170 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023527032.1	9.85e-115	100.00	cell number regulator 2-like [Cucurbita pepo subsp. pepo]	[more]
XP_022942628.1	1.84e-110	95.95	cell number regulator 2-like isoform X1 [Cucurbita moschata] >KAG6599908.1 Prote...	[more]
XP_022942629.1	8.78e-109	94.59	cell number regulator 2-like isoform X2 [Cucurbita moschata]	[more]
XP_023001851.1	1.20e-106	93.24	cell number regulator 2-like [Cucurbita maxima]	[more]
XP_022942630.1	1.35e-103	89.86	cell number regulator 2-like isoform X3 [Cucurbita moschata]	[more]

BLAST of Cp4.1LG01g06170 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FVA4	8.92e-111	95.95	cell number regulator 2-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A6J1FRV9	4.25e-109	94.59	cell number regulator 2-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A6J1KJU3	5.81e-107	93.24	cell number regulator 2-like OS=Cucurbita maxima OX=3661 GN=LOC111495886 PE=4 SV...	[more]
A0A6J1FWN1	6.53e-104	89.86	cell number regulator 2-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A6J1FQT4	1.32e-103	89.19	cell number regulator 2-like isoform X5 OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]

BLAST of Cp4.1LG01g06170 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G14870.1	2.3e-41	50.00	PLANT CADMIUM RESISTANCE 2	[more]
AT5G35525.1	3.6e-39	50.00	PLAC8 family protein	[more]
AT1G68610.1	2.4e-38	56.67	PLANT CADMIUM RESISTANCE 11	[more]
AT1G14880.1	1.5e-37	51.22	PLANT CADMIUM RESISTANCE 1	[more]
AT3G18470.1	1.3e-31	48.31	PLAC8 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006461	PLAC8 motif-containing protein	PFAM	PF04749	PLAC8	coord: 15..113 e-value: 7.4E-27 score: 94.0
IPR006461	PLAC8 motif-containing protein	TIGRFAM	TIGR01571	TIGR01571	coord: 14..116 e-value: 1.0E-31 score: 107.8
IPR006461	PLAC8 motif-containing protein	PANTHER	PTHR15907	DUF614 FAMILY PROTEIN-RELATED	coord: 12..147
None	No IPR available	PANTHER	PTHR15907:SF182	PROTEIN PLANT CADMIUM RESISTANCE 1-RELATED	coord: 12..147

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g06170.1	Cp4.1LG01g06170.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane