Cp4.1LG01g05580 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG01g05580
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Differentiation-associated protein 1, putative isoform 1
Location	Cp4.1LG01: 694513 .. 695241 (+)
RNA-Seq Expression	Cp4.1LG01g05580
Synteny	Cp4.1LG01g05580

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTATTGATATTCACCAGAAGTTGCAAGCCACTTACGAGAACATTTCGAGATCCACATTTCCGAAGGTCAGCAAATTGACATCCTTGTATGCAACGTATGGCACAACAAGAGGAATTGCAAAGGAGAGAAGACAAAGACTGTCTCGCTCTCTTGCAGCTACAGGCAGCAACCAGGTAGACACAGACACCAATGAGAAGAGTGCTGGAATTACTGGAAGAACTCCTTCTGATAACATTTCCTCAGCTGTGAGTCAATCGCCTTCAGATGAGAATAGAAATCCTCAACTAAACGTTAACAATGAGGAGTCTTCTTCTCAATCTTCTGAAGCTTCCAATGAACAAGTAATGTCTTCAGATGCAAGTTCATCTCCTGATCCACAATCCACAAGAAAATCTCCTCTAACTGCAAGAGAAAGATTAAGGGCAGCCCGTGTTCTTAGCCGTTACAACGAATCAAAGACCACCAAATCAGACATGGGCAGCAAAGTATTGGAAGCGTTACGAGAGAGTGATCGTGGGAAGAAAAGGTCGAGGCTTCCCGAAGCGCCTACTAATTTGTTTGATGACAGCAAGCGAGGGATGCCAAAAGCAGGCTTGACTTTTCAGTTCCCTGGGGGTTCAGATCTGCTCGTCATTGCCTTCTCGTTCGTTTTCATTAGCACAGTAATGTTTGCTACCACTTACATTGTGTGGAAAGTTGGTGCAATCCATTTTAATGAGTACTGA

mRNA sequence

ATGCCTATTGATATTCACCAGAAGTTGCAAGCCACTTACGAGAACATTTCGAGATCCACATTTCCGAAGGTCAGCAAATTGACATCCTTGTATGCAACGTATGGCACAACAAGAGGAATTGCAAAGGAGAGAAGACAAAGACTGTCTCGCTCTCTTGCAGCTACAGGCAGCAACCAGGTAGACACAGACACCAATGAGAAGAGTGCTGGAATTACTGGAAGAACTCCTTCTGATAACATTTCCTCAGCTGTGAGTCAATCGCCTTCAGATGAGAATAGAAATCCTCAACTAAACGTTAACAATGAGGAGTCTTCTTCTCAATCTTCTGAAGCTTCCAATGAACAAGTAATGTCTTCAGATGCAAGTTCATCTCCTGATCCACAATCCACAAGAAAATCTCCTCTAACTGCAAGAGAAAGATTAAGGGCAGCCCGTGTTCTTAGCCGTTACAACGAATCAAAGACCACCAAATCAGACATGGGCAGCAAAGTATTGGAAGCGTTACGAGAGAGTGATCGTGGGAAGAAAAGGTCGAGGCTTCCCGAAGCGCCTACTAATTTGTTTGATGACAGCAAGCGAGGGATGCCAAAAGCAGGCTTGACTTTTCAGTTCCCTGGGGGTTCAGATCTGCTCGTCATTGCCTTCTCGTTCGTTTTCATTAGCACAGTAATGTTTGCTACCACTTACATTGTGTGGAAAGTTGGTGCAATCCATTTTAATGAGTACTGA

Coding sequence (CDS)

ATGCCTATTGATATTCACCAGAAGTTGCAAGCCACTTACGAGAACATTTCGAGATCCACATTTCCGAAGGTCAGCAAATTGACATCCTTGTATGCAACGTATGGCACAACAAGAGGAATTGCAAAGGAGAGAAGACAAAGACTGTCTCGCTCTCTTGCAGCTACAGGCAGCAACCAGGTAGACACAGACACCAATGAGAAGAGTGCTGGAATTACTGGAAGAACTCCTTCTGATAACATTTCCTCAGCTGTGAGTCAATCGCCTTCAGATGAGAATAGAAATCCTCAACTAAACGTTAACAATGAGGAGTCTTCTTCTCAATCTTCTGAAGCTTCCAATGAACAAGTAATGTCTTCAGATGCAAGTTCATCTCCTGATCCACAATCCACAAGAAAATCTCCTCTAACTGCAAGAGAAAGATTAAGGGCAGCCCGTGTTCTTAGCCGTTACAACGAATCAAAGACCACCAAATCAGACATGGGCAGCAAAGTATTGGAAGCGTTACGAGAGAGTGATCGTGGGAAGAAAAGGTCGAGGCTTCCCGAAGCGCCTACTAATTTGTTTGATGACAGCAAGCGAGGGATGCCAAAAGCAGGCTTGACTTTTCAGTTCCCTGGGGGTTCAGATCTGCTCGTCATTGCCTTCTCGTTCGTTTTCATTAGCACAGTAATGTTTGCTACCACTTACATTGTGTGGAAAGTTGGTGCAATCCATTTTAATGAGTACTGA

Protein sequence

MPIDIHQKLQATYENISRSTFPKVSKLTSLYATYGTTRGIAKERRQRLSRSLAATGSNQVDTDTNEKSAGITGRTPSDNISSAVSQSPSDENRNPQLNVNNEESSSQSSEASNEQVMSSDASSSPDPQSTRKSPLTARERLRAARVLSRYNESKTTKSDMGSKVLEALRESDRGKKRSRLPEAPTNLFDDSKRGMPKAGLTFQFPGGSDLLVIAFSFVFISTVMFATTYIVWKVGAIHFNEY

Homology

[Close]

BLAST of Cp4.1LG01g05580 vs. NCBI nr
Match: KAG7030661.1 (hypothetical protein SDJN02_04698, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 432 bits (1110), Expect = 1.01e-151
Identity = 238/242 (98.35%), Postives = 239/242 (98.76%), Query Frame = 0


Query: 1   MPIDIHQKLQATYENISRSTFPKVSKLTSLYATYGTTRGIAKERRQRLSRSLAATGSNQV 60
           MPIDIHQKLQATYENISRSTFPKVSK TSLYAT GTTRGIAKERRQRLSRSLAATGSNQV
Sbjct: 1   MPIDIHQKLQATYENISRSTFPKVSKSTSLYATCGTTRGIAKERRQRLSRSLAATGSNQV 60

Query: 61  DTDTNEKSAGITGRTPSDNISSAVSQSPSDENRNPQLNVNNEESSSQSSEASNEQVMSSD 120
           DTDTNEKSAGITGR+PSDNISSAVSQSPSDENRNPQLNVNNEESSSQSSEASNEQVMSSD
Sbjct: 61  DTDTNEKSAGITGRSPSDNISSAVSQSPSDENRNPQLNVNNEESSSQSSEASNEQVMSSD 120

Query: 121 ASSSPDPQSTRKSPLTARERLRAARVLSRYNESKTTKSDMGSKVLEALRESDRGKKRSRL 180
           ASSSPDPQSTRKSPLTARERLRAARVLSRYNESKTTKSDMGSKVLEALRESDRGKKRSRL
Sbjct: 121 ASSSPDPQSTRKSPLTARERLRAARVLSRYNESKTTKSDMGSKVLEALRESDRGKKRSRL 180

Query: 181 PEAPTNLFDDSKRGMPKAGLTFQFPGGSDLLVIAFSFVFISTVMFATTYIVWKVGAIHFN 240
           PEAPTNLFDDSKRGMPKAGLTFQFPGGSDL VIAFSFVFISTVMFATTYIVWKVGAIHFN
Sbjct: 181 PEAPTNLFDDSKRGMPKAGLTFQFPGGSDLFVIAFSFVFISTVMFATTYIVWKVGAIHFN 240

Query: 241 EY 242
           EY
Sbjct: 241 EY 242

[Close]

BLAST of Cp4.1LG01g05580 vs. NCBI nr
Match: XP_023512779.1 (uncharacterized protein LOC111777420 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023512788.1 uncharacterized protein LOC111777420 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 426 bits (1094), Expect = 3.58e-149
Identity = 235/235 (100.00%), Postives = 235/235 (100.00%), Query Frame = 0


Query: 8   KLQATYENISRSTFPKVSKLTSLYATYGTTRGIAKERRQRLSRSLAATGSNQVDTDTNEK 67
           KLQATYENISRSTFPKVSKLTSLYATYGTTRGIAKERRQRLSRSLAATGSNQVDTDTNEK
Sbjct: 15  KLQATYENISRSTFPKVSKLTSLYATYGTTRGIAKERRQRLSRSLAATGSNQVDTDTNEK 74

Query: 68  SAGITGRTPSDNISSAVSQSPSDENRNPQLNVNNEESSSQSSEASNEQVMSSDASSSPDP 127
           SAGITGRTPSDNISSAVSQSPSDENRNPQLNVNNEESSSQSSEASNEQVMSSDASSSPDP
Sbjct: 75  SAGITGRTPSDNISSAVSQSPSDENRNPQLNVNNEESSSQSSEASNEQVMSSDASSSPDP 134

Query: 128 QSTRKSPLTARERLRAARVLSRYNESKTTKSDMGSKVLEALRESDRGKKRSRLPEAPTNL 187
           QSTRKSPLTARERLRAARVLSRYNESKTTKSDMGSKVLEALRESDRGKKRSRLPEAPTNL
Sbjct: 135 QSTRKSPLTARERLRAARVLSRYNESKTTKSDMGSKVLEALRESDRGKKRSRLPEAPTNL 194

Query: 188 FDDSKRGMPKAGLTFQFPGGSDLLVIAFSFVFISTVMFATTYIVWKVGAIHFNEY 242
           FDDSKRGMPKAGLTFQFPGGSDLLVIAFSFVFISTVMFATTYIVWKVGAIHFNEY
Sbjct: 195 FDDSKRGMPKAGLTFQFPGGSDLLVIAFSFVFISTVMFATTYIVWKVGAIHFNEY 249

[Close]

BLAST of Cp4.1LG01g05580 vs. NCBI nr
Match: XP_023512796.1 (uncharacterized protein LOC111777420 isoform X3 [Cucurbita pepo subsp. pepo] >XP_023512804.1 uncharacterized protein LOC111777420 isoform X4 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 424 bits (1089), Expect = 1.99e-148
Identity = 234/234 (100.00%), Postives = 234/234 (100.00%), Query Frame = 0


Query: 9   LQATYENISRSTFPKVSKLTSLYATYGTTRGIAKERRQRLSRSLAATGSNQVDTDTNEKS 68
           LQATYENISRSTFPKVSKLTSLYATYGTTRGIAKERRQRLSRSLAATGSNQVDTDTNEKS
Sbjct: 15  LQATYENISRSTFPKVSKLTSLYATYGTTRGIAKERRQRLSRSLAATGSNQVDTDTNEKS 74

Query: 69  AGITGRTPSDNISSAVSQSPSDENRNPQLNVNNEESSSQSSEASNEQVMSSDASSSPDPQ 128
           AGITGRTPSDNISSAVSQSPSDENRNPQLNVNNEESSSQSSEASNEQVMSSDASSSPDPQ
Sbjct: 75  AGITGRTPSDNISSAVSQSPSDENRNPQLNVNNEESSSQSSEASNEQVMSSDASSSPDPQ 134

Query: 129 STRKSPLTARERLRAARVLSRYNESKTTKSDMGSKVLEALRESDRGKKRSRLPEAPTNLF 188
           STRKSPLTARERLRAARVLSRYNESKTTKSDMGSKVLEALRESDRGKKRSRLPEAPTNLF
Sbjct: 135 STRKSPLTARERLRAARVLSRYNESKTTKSDMGSKVLEALRESDRGKKRSRLPEAPTNLF 194

Query: 189 DDSKRGMPKAGLTFQFPGGSDLLVIAFSFVFISTVMFATTYIVWKVGAIHFNEY 242
           DDSKRGMPKAGLTFQFPGGSDLLVIAFSFVFISTVMFATTYIVWKVGAIHFNEY
Sbjct: 195 DDSKRGMPKAGLTFQFPGGSDLLVIAFSFVFISTVMFATTYIVWKVGAIHFNEY 248

[Close]

BLAST of Cp4.1LG01g05580 vs. NCBI nr
Match: XP_022942924.1 (uncharacterized protein LOC111447809 [Cucurbita moschata])

HSP 1 Score: 417 bits (1071), Expect = 1.14e-145
Identity = 231/235 (98.30%), Postives = 232/235 (98.72%), Query Frame = 0


Query: 8   KLQATYENISRSTFPKVSKLTSLYATYGTTRGIAKERRQRLSRSLAATGSNQVDTDTNEK 67
           KLQATYENISRSTFPKVSK TSLYAT GTTRGIAKERRQRLSRSLAATGSNQVDTDTNEK
Sbjct: 15  KLQATYENISRSTFPKVSKSTSLYATCGTTRGIAKERRQRLSRSLAATGSNQVDTDTNEK 74

Query: 68  SAGITGRTPSDNISSAVSQSPSDENRNPQLNVNNEESSSQSSEASNEQVMSSDASSSPDP 127
           SAGITGR+PSDNISSAVSQSPSDENRNPQLNVNNEESSSQSSEASNEQVMSSDASSSPDP
Sbjct: 75  SAGITGRSPSDNISSAVSQSPSDENRNPQLNVNNEESSSQSSEASNEQVMSSDASSSPDP 134

Query: 128 QSTRKSPLTARERLRAARVLSRYNESKTTKSDMGSKVLEALRESDRGKKRSRLPEAPTNL 187
           QSTRKSPLTARERLRAARVLSRYNESKTTKSDMGSKVLEALRESDRGKKRSRLPEAPTNL
Sbjct: 135 QSTRKSPLTARERLRAARVLSRYNESKTTKSDMGSKVLEALRESDRGKKRSRLPEAPTNL 194

Query: 188 FDDSKRGMPKAGLTFQFPGGSDLLVIAFSFVFISTVMFATTYIVWKVGAIHFNEY 242
           FDDSKRGMPKAGLTFQFPGGSDL VIAFSFVFISTVMFATTYIVWKVGAIHFNEY
Sbjct: 195 FDDSKRGMPKAGLTFQFPGGSDLFVIAFSFVFISTVMFATTYIVWKVGAIHFNEY 249

[Close]

BLAST of Cp4.1LG01g05580 vs. NCBI nr
Match: KAG6599986.1 (hypothetical protein SDJN03_05219, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 413 bits (1061), Expect = 3.82e-144
Identity = 229/235 (97.45%), Postives = 231/235 (98.30%), Query Frame = 0


Query: 8   KLQATYENISRSTFPKVSKLTSLYATYGTTRGIAKERRQRLSRSLAATGSNQVDTDTNEK 67
           KLQATYENISRSTFPKVSK TSLYAT GTTRGIAKERRQ+LSRSLAATGSNQVDTDTNEK
Sbjct: 15  KLQATYENISRSTFPKVSKSTSLYATCGTTRGIAKERRQKLSRSLAATGSNQVDTDTNEK 74

Query: 68  SAGITGRTPSDNISSAVSQSPSDENRNPQLNVNNEESSSQSSEASNEQVMSSDASSSPDP 127
           SAGITGR+PSDNISSAVSQSPSD NRNPQLNVNNEESSSQSSEASNEQVMSSDASSSPDP
Sbjct: 75  SAGITGRSPSDNISSAVSQSPSDMNRNPQLNVNNEESSSQSSEASNEQVMSSDASSSPDP 134

Query: 128 QSTRKSPLTARERLRAARVLSRYNESKTTKSDMGSKVLEALRESDRGKKRSRLPEAPTNL 187
           QSTRKSPLTARERLRAARVLSRYNESKTTKSDMGSKVLEALRESDRGKKRSRLPEAPTNL
Sbjct: 135 QSTRKSPLTARERLRAARVLSRYNESKTTKSDMGSKVLEALRESDRGKKRSRLPEAPTNL 194

Query: 188 FDDSKRGMPKAGLTFQFPGGSDLLVIAFSFVFISTVMFATTYIVWKVGAIHFNEY 242
           FDDSKRGMPKAGLTFQFPGGSDL VIAFSFVFISTVMFATTYIVWKVGAIHFNEY
Sbjct: 195 FDDSKRGMPKAGLTFQFPGGSDLFVIAFSFVFISTVMFATTYIVWKVGAIHFNEY 249

[Close]

BLAST of Cp4.1LG01g05580 vs. ExPASy TrEMBL
Match: A0A6J1FSR9 (uncharacterized protein LOC111447809 OS=Cucurbita moschata OX=3662 GN=LOC111447809 PE=4 SV=1)

HSP 1 Score: 417 bits (1071), Expect = 5.54e-146
Identity = 231/235 (98.30%), Postives = 232/235 (98.72%), Query Frame = 0


Query: 8   KLQATYENISRSTFPKVSKLTSLYATYGTTRGIAKERRQRLSRSLAATGSNQVDTDTNEK 67
           KLQATYENISRSTFPKVSK TSLYAT GTTRGIAKERRQRLSRSLAATGSNQVDTDTNEK
Sbjct: 15  KLQATYENISRSTFPKVSKSTSLYATCGTTRGIAKERRQRLSRSLAATGSNQVDTDTNEK 74

Query: 68  SAGITGRTPSDNISSAVSQSPSDENRNPQLNVNNEESSSQSSEASNEQVMSSDASSSPDP 127
           SAGITGR+PSDNISSAVSQSPSDENRNPQLNVNNEESSSQSSEASNEQVMSSDASSSPDP
Sbjct: 75  SAGITGRSPSDNISSAVSQSPSDENRNPQLNVNNEESSSQSSEASNEQVMSSDASSSPDP 134

Query: 128 QSTRKSPLTARERLRAARVLSRYNESKTTKSDMGSKVLEALRESDRGKKRSRLPEAPTNL 187
           QSTRKSPLTARERLRAARVLSRYNESKTTKSDMGSKVLEALRESDRGKKRSRLPEAPTNL
Sbjct: 135 QSTRKSPLTARERLRAARVLSRYNESKTTKSDMGSKVLEALRESDRGKKRSRLPEAPTNL 194

Query: 188 FDDSKRGMPKAGLTFQFPGGSDLLVIAFSFVFISTVMFATTYIVWKVGAIHFNEY 242
           FDDSKRGMPKAGLTFQFPGGSDL VIAFSFVFISTVMFATTYIVWKVGAIHFNEY
Sbjct: 195 FDDSKRGMPKAGLTFQFPGGSDLFVIAFSFVFISTVMFATTYIVWKVGAIHFNEY 249

[Close]

BLAST of Cp4.1LG01g05580 vs. ExPASy TrEMBL
Match: A0A6J1KAP2 (uncharacterized protein LOC111491638 OS=Cucurbita maxima OX=3661 GN=LOC111491638 PE=4 SV=1)

HSP 1 Score: 413 bits (1061), Expect = 1.85e-144
Identity = 228/235 (97.02%), Postives = 231/235 (98.30%), Query Frame = 0


Query: 8   KLQATYENISRSTFPKVSKLTSLYATYGTTRGIAKERRQRLSRSLAATGSNQVDTDTNEK 67
           KLQATYENISRSTFPKVSK TSLYATYGTTRGIAKERRQRLSRSLAATGSNQVDTDTNEK
Sbjct: 15  KLQATYENISRSTFPKVSKSTSLYATYGTTRGIAKERRQRLSRSLAATGSNQVDTDTNEK 74

Query: 68  SAGITGRTPSDNISSAVSQSPSDENRNPQLNVNNEESSSQSSEASNEQVMSSDASSSPDP 127
           SAGITGRTPSDNISSAV+QSPSDENRNPQL VNNEESSSQSSE SNEQVMSSDASSSPDP
Sbjct: 75  SAGITGRTPSDNISSAVNQSPSDENRNPQLIVNNEESSSQSSEVSNEQVMSSDASSSPDP 134

Query: 128 QSTRKSPLTARERLRAARVLSRYNESKTTKSDMGSKVLEALRESDRGKKRSRLPEAPTNL 187
           QSTRKSPLTARERLRAARVLSRYN+SKTTKSDMGSKVLEALRESDRGKKRSRLPEAPTNL
Sbjct: 135 QSTRKSPLTARERLRAARVLSRYNDSKTTKSDMGSKVLEALRESDRGKKRSRLPEAPTNL 194

Query: 188 FDDSKRGMPKAGLTFQFPGGSDLLVIAFSFVFISTVMFATTYIVWKVGAIHFNEY 242
           FDDSKRGMPKAGLTFQFPGGSDL VIAFSFVFIS+VMFATTYIVWKVGAIHFNEY
Sbjct: 195 FDDSKRGMPKAGLTFQFPGGSDLFVIAFSFVFISSVMFATTYIVWKVGAIHFNEY 249

[Close]

BLAST of Cp4.1LG01g05580 vs. ExPASy TrEMBL
Match: A0A5D3E421 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold344G00660 PE=4 SV=1)

HSP 1 Score: 327 bits (838), Expect = 1.71e-110
Identity = 194/243 (79.84%), Postives = 208/243 (85.60%), Query Frame = 0


Query: 7   QKLQATYENISRSTFPKVSKLTSLYATYGTTRGIAKERRQRLSRSLAATGSNQVDTDTNE 66
           +K Q TYEN+SRS+FP V K TSL  TY TTRGIAKERR+ LS SLAATGSNQVDT+TNE
Sbjct: 9   EKWQVTYENVSRSSFPNVRKSTSLCGTYCTTRGIAKERRRGLSLSLAATGSNQVDTNTNE 68

Query: 67  KSAGITGRTPSDNISSAVSQSPSD---ENRNPQLNVNNEESSSQSSEASNEQVMSS---- 126
           K + ITGRT S++ SSA+SQSPS+   EN   QLNVNNE SSSQ SEASN QV+SS    
Sbjct: 69  KGSEITGRTLSNDNSSALSQSPSNASSENGISQLNVNNE-SSSQLSEASNGQVLSSVQNP 128

Query: 127 DASSSPDPQSTRKSPLTARERLRAARVLSRYNESKTTKSDMGSKVLEALRESDRGKKRSR 186
           D SSSPDPQST+KSPLTARERLRAARVLSRYNESKT+KSDMGSKVLEA+RESDRGKKRSR
Sbjct: 129 DTSSSPDPQSTKKSPLTARERLRAARVLSRYNESKTSKSDMGSKVLEAIRESDRGKKRSR 188

Query: 187 LPEAPTNLFDDSKRGMPKAGLTFQFPGGSDLLVIAFSFVFISTVMFATTYIVWKVGAIHF 242
           LPEAP NLFDDSKRGMPK G TFQFPGGSDL  I FSFVFISTVMFATTYIVWKVG IHF
Sbjct: 189 LPEAPINLFDDSKRGMPKPGWTFQFPGGSDLFFIVFSFVFISTVMFATTYIVWKVGGIHF 248

[Close]

BLAST of Cp4.1LG01g05580 vs. ExPASy TrEMBL
Match: A0A1S3BYZ3 (uncharacterized protein LOC103495120 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495120 PE=4 SV=1)

HSP 1 Score: 326 bits (836), Expect = 4.09e-110
Identity = 194/242 (80.17%), Postives = 207/242 (85.54%), Query Frame = 0


Query: 8   KLQATYENISRSTFPKVSKLTSLYATYGTTRGIAKERRQRLSRSLAATGSNQVDTDTNEK 67
           K Q TYEN+SRS+FP V K TSL  TY TTRGIAKERR+ LS SLAATGSNQVDT+TNEK
Sbjct: 15  KWQVTYENVSRSSFPNVRKSTSLCGTYCTTRGIAKERRRGLSLSLAATGSNQVDTNTNEK 74

Query: 68  SAGITGRTPSDNISSAVSQSPSD---ENRNPQLNVNNEESSSQSSEASNEQVMSS----D 127
            + ITGRT S++ SSA+SQSPS+   EN   QLNVNNE SSSQ SEASN QV+SS    D
Sbjct: 75  GSEITGRTLSNDNSSALSQSPSNASSENGISQLNVNNE-SSSQLSEASNGQVLSSVQNPD 134

Query: 128 ASSSPDPQSTRKSPLTARERLRAARVLSRYNESKTTKSDMGSKVLEALRESDRGKKRSRL 187
            SSSPDPQST+KSPLTARERLRAARVLSRYNESKT+KSDMGSKVLEA+RESDRGKKRSRL
Sbjct: 135 TSSSPDPQSTKKSPLTARERLRAARVLSRYNESKTSKSDMGSKVLEAIRESDRGKKRSRL 194

Query: 188 PEAPTNLFDDSKRGMPKAGLTFQFPGGSDLLVIAFSFVFISTVMFATTYIVWKVGAIHFN 242
           PEAP NLFDDSKRGMPK G TFQFPGGSDL  I FSFVFISTVMFATTYIVWKVG IHFN
Sbjct: 195 PEAPINLFDDSKRGMPKPGWTFQFPGGSDLFFIVFSFVFISTVMFATTYIVWKVGGIHFN 254

[Close]

BLAST of Cp4.1LG01g05580 vs. ExPASy TrEMBL
Match: A0A1S3BZJ0 (uncharacterized protein LOC103495120 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103495120 PE=4 SV=1)

HSP 1 Score: 325 bits (833), Expect = 1.13e-109
Identity = 193/240 (80.42%), Postives = 206/240 (85.83%), Query Frame = 0


Query: 10  QATYENISRSTFPKVSKLTSLYATYGTTRGIAKERRQRLSRSLAATGSNQVDTDTNEKSA 69
           Q TYEN+SRS+FP V K TSL  TY TTRGIAKERR+ LS SLAATGSNQVDT+TNEK +
Sbjct: 16  QVTYENVSRSSFPNVRKSTSLCGTYCTTRGIAKERRRGLSLSLAATGSNQVDTNTNEKGS 75

Query: 70  GITGRTPSDNISSAVSQSPSD---ENRNPQLNVNNEESSSQSSEASNEQVMSS----DAS 129
            ITGRT S++ SSA+SQSPS+   EN   QLNVNNE SSSQ SEASN QV+SS    D S
Sbjct: 76  EITGRTLSNDNSSALSQSPSNASSENGISQLNVNNE-SSSQLSEASNGQVLSSVQNPDTS 135

Query: 130 SSPDPQSTRKSPLTARERLRAARVLSRYNESKTTKSDMGSKVLEALRESDRGKKRSRLPE 189
           SSPDPQST+KSPLTARERLRAARVLSRYNESKT+KSDMGSKVLEA+RESDRGKKRSRLPE
Sbjct: 136 SSPDPQSTKKSPLTARERLRAARVLSRYNESKTSKSDMGSKVLEAIRESDRGKKRSRLPE 195

Query: 190 APTNLFDDSKRGMPKAGLTFQFPGGSDLLVIAFSFVFISTVMFATTYIVWKVGAIHFNEY 242
           AP NLFDDSKRGMPK G TFQFPGGSDL  I FSFVFISTVMFATTYIVWKVG IHFNEY
Sbjct: 196 APINLFDDSKRGMPKPGWTFQFPGGSDLFFIVFSFVFISTVMFATTYIVWKVGGIHFNEY 254

[Close]

BLAST of Cp4.1LG01g05580 vs. TAIR 10
Match: AT3G56010.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 25 Blast hits to 25 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 152.1 bits (383), Expect = 5.6e-37
Identity = 94/155 (60.65%), Postives = 117/155 (75.48%), Query Frame = 0


Query: 90  DENRNPQLNVNNEESSSQSSEASNEQVMSSDASSSPDPQSTRKSPLTARERLRAARVLSR 149
           D N N   +V      S SS  SN+ V  S  SS+    + +K+PLTARERLRAARVLSR
Sbjct: 53  DTNDN---SVTTTSVDSSSSSDSNKPVSESVESSN---GTAKKAPLTARERLRAARVLSR 112

Query: 150 YNES--KTTKSDMGSKVLEALRESD-RGKKRSRLPEAPTNLFDDSKRGMPKAGLTFQFPG 209
           Y E+  K +K  MGS++L+ L+ESD + K++  LPEAPTN+ DDS+RGMPK+GLTF  PG
Sbjct: 113 YTEATPKPSKPKMGSQLLDVLKESDKKSKRKPGLPEAPTNMLDDSRRGMPKSGLTFDLPG 172

Query: 210 GSDLLVIAFSFVFISTVMFATTYIVWKVGAIHFNE 242
           GSD+L+IAFSFVFISTVMFATT++VWK+GAIHFNE
Sbjct: 173 GSDILIIAFSFVFISTVMFATTFLVWKLGAIHFNE 201

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g05580 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG01g05580 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7030661.1	1.01e-151	98.35	hypothetical protein SDJN02_04698, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_023512779.1	3.58e-149	100.00	uncharacterized protein LOC111777420 isoform X1 [Cucurbita pepo subsp. pepo] >XP...	[more]
XP_023512796.1	1.99e-148	100.00	uncharacterized protein LOC111777420 isoform X3 [Cucurbita pepo subsp. pepo] >XP...	[more]
XP_022942924.1	1.14e-145	98.30	uncharacterized protein LOC111447809 [Cucurbita moschata]	[more]
KAG6599986.1	3.82e-144	97.45	hypothetical protein SDJN03_05219, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Cp4.1LG01g05580 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FSR9	5.54e-146	98.30	uncharacterized protein LOC111447809 OS=Cucurbita moschata OX=3662 GN=LOC1114478...	[more]
A0A6J1KAP2	1.85e-144	97.02	uncharacterized protein LOC111491638 OS=Cucurbita maxima OX=3661 GN=LOC111491638...	[more]
A0A5D3E421	1.71e-110	79.84	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3BYZ3	4.09e-110	80.17	uncharacterized protein LOC103495120 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3BZJ0	1.13e-109	80.42	uncharacterized protein LOC103495120 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of Cp4.1LG01g05580 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G56010.1	5.6e-37	60.65	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 41..138
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 169..191
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 169..183
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 50..132
None	No IPR available	PANTHER	PTHR37233	TRANSMEMBRANE PROTEIN	coord: 5..242
None	No IPR available	PANTHER	PTHR37233:SF2	TRANSMEMBRANE PROTEIN	coord: 5..242

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g05580.1	Cp4.1LG01g05580.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane