Cp4.1LG01g05470 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG01g05470
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	LOB domain-containing protein
Location	Cp4.1LG01: 624799 .. 625152 (-)
RNA-Seq Expression	Cp4.1LG01g05470
Synteny	Cp4.1LG01g05470

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGCAGGAACTGCCGGTGCAACAAAGAGGCGACGCCGTGATGAGCCTAGTTTATGAGGCAACTGCAAGAGTGCGGGACCCAGTTTATGGTTGTGTAGGGGCAATTTCGTACTTACAAAACCAAGTTTCTCAGCTACAAATGCAATTAGCTGTTGCTCAATCTGAGATACTTTGCTTCCAAATGCAACAAGACCACCTTGTTTTCCCAAATTGCCCTCAGATCTATTCCGACGAGAAACCGCCGTCTCTCCAACTCCCGCCGCCGTCTCCTCCCCGGTCTCAGTGCTTCAACTTTGCTTCCTCTCCCAATGTAATCTATGACACCATTTTTGGACATGACATTGTTTCTTAA

mRNA sequence

ATGTTGCAGGAACTGCCGGTGCAACAAAGAGGCGACGCCGTGATGAGCCTAGTTTATGAGGCAACTGCAAGAGTGCGGGACCCAGTTTATGGTTGTGTAGGGGCAATTTCGTACTTACAAAACCAAGTTTCTCAGCTACAAATGCAATTAGCTGTTGCTCAATCTGAGATACTTTGCTTCCAAATGCAACAAGACCACCTTGTTTTCCCAAATTGCCCTCAGATCTATTCCGACGAGAAACCGCCGTCTCTCCAACTCCCGCCGCCGTCTCCTCCCCGGTCTCAGTGCTTCAACTTTGCTTCCTCTCCCAATGTAATCTATGACACCATTTTTGGACATGACATTGTTTCTTAA

Coding sequence (CDS)

ATGTTGCAGGAACTGCCGGTGCAACAAAGAGGCGACGCCGTGATGAGCCTAGTTTATGAGGCAACTGCAAGAGTGCGGGACCCAGTTTATGGTTGTGTAGGGGCAATTTCGTACTTACAAAACCAAGTTTCTCAGCTACAAATGCAATTAGCTGTTGCTCAATCTGAGATACTTTGCTTCCAAATGCAACAAGACCACCTTGTTTTCCCAAATTGCCCTCAGATCTATTCCGACGAGAAACCGCCGTCTCTCCAACTCCCGCCGCCGTCTCCTCCCCGGTCTCAGTGCTTCAACTTTGCTTCCTCTCCCAATGTAATCTATGACACCATTTTTGGACATGACATTGTTTCTTAA

Protein sequence

MLQELPVQQRGDAVMSLVYEATARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQSEILCFQMQQDHLVFPNCPQIYSDEKPPSLQLPPPSPPRSQCFNFASSPNVIYDTIFGHDIVS

Homology

[Close]

BLAST of Cp4.1LG01g05470 vs. ExPASy Swiss-Prot
Match: Q8LBW3 (LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 SV=2)

HSP 1 Score: 109.4 bits (272), Expect = 2.8e-23
Identity = 56/65 (86.15%), Postives = 59/65 (90.77%), Query Frame = 0


Query: 1   MLQELPVQQRGDAVMSLVYEATARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQSEILCF 60
           MLQELPV QR DAV SLV+EA ARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQ+EILC 
Sbjct: 52  MLQELPVHQRADAVNSLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCI 111

Query: 61  QMQQD 66
           QMQ +
Sbjct: 112 QMQNE 116

[Close]

BLAST of Cp4.1LG01g05470 vs. ExPASy Swiss-Prot
Match: Q9SHE9 (LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 1.0e-17
Identity = 52/93 (55.91%), Postives = 65/93 (69.89%), Query Frame = 0


Query: 1   MLQELPVQQRGDAVMSLVYEATARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQSEILCF 60
           MLQELP+ QRGDAV S+VYEA ARVRDPVYGCVGAIS LQ Q+  LQ QLA+AQ+E++  
Sbjct: 57  MLQELPIHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHL 116

Query: 61  QMQQD-----HLVFPNCPQIYSDEKPPSLQLPP 89
           +++Q      H + P+ P   S   P S Q+ P
Sbjct: 117 RVRQSTNFPGHGLCPDSPS--SSGSPSSKQVSP 147

[Close]

BLAST of Cp4.1LG01g05470 vs. ExPASy Swiss-Prot
Match: Q9LQR0 (LOB domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=LBD1 PE=2 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 2.8e-15
Identity = 43/67 (64.18%), Postives = 52/67 (77.61%), Query Frame = 0


Query: 2   LQELPVQQRGDAVMSLVYEATARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQSEILCFQ 61
           LQELP  QR DAV S+VYEA AR+RDPVYGC GAI +LQ QVS+LQ QLA AQ E++  Q
Sbjct: 78  LQELPESQRTDAVNSMVYEAEARIRDPVYGCAGAIYHLQRQVSELQAQLAKAQVEMVNMQ 137

Query: 62  MQQDHLV 69
            Q+ +L+
Sbjct: 138 FQRSNLL 144

[Close]

BLAST of Cp4.1LG01g05470 vs. ExPASy Swiss-Prot
Match: Q9SK08 (LOB domain-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=LBD11 PE=2 SV=2)

HSP 1 Score: 80.5 bits (197), Expect = 1.4e-14
Identity = 42/67 (62.69%), Postives = 51/67 (76.12%), Query Frame = 0


Query: 2   LQELPVQQRGDAVMSLVYEATARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQSEILCFQ 61
           LQELP  QR DAV S+VYEA AR+RDPVYGC GAI +LQ QVS+LQ QLA  Q E++  Q
Sbjct: 100 LQELPESQRTDAVNSMVYEAGARMRDPVYGCAGAIYHLQRQVSELQAQLAKTQVELVGMQ 159

Query: 62  MQQDHLV 69
           +Q+  L+
Sbjct: 160 LQRSSLL 166

[Close]

BLAST of Cp4.1LG01g05470 vs. ExPASy Swiss-Prot
Match: Q9FML4 (Protein LATERAL ORGAN BOUNDARIES OS=Arabidopsis thaliana OX=3702 GN=LOB PE=1 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 4.5e-13
Identity = 45/93 (48.39%), Postives = 57/93 (61.29%), Query Frame = 0


Query: 1   MLQELPVQQRGDAVMSLVYEATARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQSEILCF 60
           +L EL   QR DAV SL YEA ARVRDPVYGCVGAISYLQ QV +LQ +L  A +++  +
Sbjct: 55  LLNELLPHQREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHY 114

Query: 61  QMQQDHLVFPN--CPQIYSDEKPPSLQLPPPSP 92
            +       P      ++  +  PS QLPP +P
Sbjct: 115 GLSTSAAGAPGNVVDLVFQPQPLPSQQLPPLNP 147

[Close]

BLAST of Cp4.1LG01g05470 vs. NCBI nr
Match: XP_023543167.1 (LOB domain-containing protein 12-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 235 bits (600), Expect = 2.36e-77
Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 0


Query: 1   MLQELPVQQRGDAVMSLVYEATARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQSEILCF 60
           MLQELPVQQRGDAVMSLVYEATARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQSEILCF
Sbjct: 50  MLQELPVQQRGDAVMSLVYEATARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQSEILCF 109

Query: 61  QMQQDHLVFPNCPQIYSDEKPPSLQLPPPSPPRSQCFNFASSPNVIYDTIFGHDIVS 117
           QMQQDHLVFPNCPQIYSDEKPPSLQLPPPSPPRSQCFNFASSPNVIYDTIFGHDIVS
Sbjct: 110 QMQQDHLVFPNCPQIYSDEKPPSLQLPPPSPPRSQCFNFASSPNVIYDTIFGHDIVS 166

[Close]

BLAST of Cp4.1LG01g05470 vs. NCBI nr
Match: KAG6599972.1 (LOB domain-containing protein 12, partial [Cucurbita argyrosperma subsp. sororia] >KAG7030651.1 LOB domain-containing protein 12, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 231 bits (588), Expect = 1.59e-75
Identity = 115/117 (98.29%), Postives = 115/117 (98.29%), Query Frame = 0


Query: 1   MLQELPVQQRGDAVMSLVYEATARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQSEILCF 60
           MLQELPVQQRGDAVMSLVYEATARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQSEILCF
Sbjct: 50  MLQELPVQQRGDAVMSLVYEATARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQSEILCF 109

Query: 61  QMQQDHLVFPNCPQIYSDEKPPSLQLPPPSPPRSQCFNFASSPNVIYDTIFGHDIVS 117
           QMQQDHLVFPNCPQIYSDEKPPSL LPPPSPPRSQCFNFASSPNVIYD IFGHDIVS
Sbjct: 110 QMQQDHLVFPNCPQIYSDEKPPSLLLPPPSPPRSQCFNFASSPNVIYDAIFGHDIVS 166

[Close]

BLAST of Cp4.1LG01g05470 vs. NCBI nr
Match: XP_022941870.1 (LOB domain-containing protein 12-like [Cucurbita moschata])

HSP 1 Score: 230 bits (587), Expect = 2.26e-75
Identity = 114/117 (97.44%), Postives = 115/117 (98.29%), Query Frame = 0


Query: 1   MLQELPVQQRGDAVMSLVYEATARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQSEILCF 60
           MLQELPVQQRGDAVMSLVYEATARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQSEILCF
Sbjct: 50  MLQELPVQQRGDAVMSLVYEATARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQSEILCF 109

Query: 61  QMQQDHLVFPNCPQIYSDEKPPSLQLPPPSPPRSQCFNFASSPNVIYDTIFGHDIVS 117
           QMQQDHLVFPNCPQIYSDEKPPSL LPPPSPPRSQCFNFASSPN+IYD IFGHDIVS
Sbjct: 110 QMQQDHLVFPNCPQIYSDEKPPSLLLPPPSPPRSQCFNFASSPNIIYDAIFGHDIVS 166

[Close]

BLAST of Cp4.1LG01g05470 vs. NCBI nr
Match: XP_022996637.1 (LOB domain-containing protein 12-like [Cucurbita maxima])

HSP 1 Score: 229 bits (585), Expect = 4.56e-75
Identity = 115/117 (98.29%), Postives = 115/117 (98.29%), Query Frame = 0


Query: 1   MLQELPVQQRGDAVMSLVYEATARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQSEILCF 60
           MLQELPVQQRGDAVMSLVYEATARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQSEILCF
Sbjct: 50  MLQELPVQQRGDAVMSLVYEATARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQSEILCF 109

Query: 61  QMQQDHLVFPNCPQIYSDEKPPSLQLPPPSPPRSQCFNFASSPNVIYDTIFGHDIVS 117
           QMQQDHLVFPNCPQIYSDEKPPSL LPPPSPPRSQCFNFASS NVIYDTIFGHDIVS
Sbjct: 110 QMQQDHLVFPNCPQIYSDEKPPSLLLPPPSPPRSQCFNFASSSNVIYDTIFGHDIVS 166

[Close]

BLAST of Cp4.1LG01g05470 vs. NCBI nr
Match: XP_038893139.1 (LOB domain-containing protein 12-like [Benincasa hispida])

HSP 1 Score: 217 bits (552), Expect = 4.87e-70
Identity = 108/117 (92.31%), Postives = 112/117 (95.73%), Query Frame = 0


Query: 1   MLQELPVQQRGDAVMSLVYEATARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQSEILCF 60
           MLQELPVQQRGDAVMSLVYEA+ARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQ+EILC 
Sbjct: 50  MLQELPVQQRGDAVMSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCI 109

Query: 61  QMQQDHLVFPNCPQIYSDEKPPSLQLPPPSPPRSQCFNFASSPNVIYDTIFGHDIVS 117
           QMQQDH VFPNCPQI+SD+KPPSL LPPPSPP SQC NFASSPNVIYDTIFGHDIVS
Sbjct: 110 QMQQDHPVFPNCPQIHSDDKPPSLLLPPPSPPPSQCLNFASSPNVIYDTIFGHDIVS 166

[Close]

BLAST of Cp4.1LG01g05470 vs. ExPASy TrEMBL
Match: A0A6J1FV10 (LOB domain-containing protein 12-like OS=Cucurbita moschata OX=3662 GN=LOC111447102 PE=3 SV=1)

HSP 1 Score: 230 bits (587), Expect = 1.09e-75
Identity = 114/117 (97.44%), Postives = 115/117 (98.29%), Query Frame = 0


Query: 1   MLQELPVQQRGDAVMSLVYEATARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQSEILCF 60
           MLQELPVQQRGDAVMSLVYEATARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQSEILCF
Sbjct: 50  MLQELPVQQRGDAVMSLVYEATARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQSEILCF 109

Query: 61  QMQQDHLVFPNCPQIYSDEKPPSLQLPPPSPPRSQCFNFASSPNVIYDTIFGHDIVS 117
           QMQQDHLVFPNCPQIYSDEKPPSL LPPPSPPRSQCFNFASSPN+IYD IFGHDIVS
Sbjct: 110 QMQQDHLVFPNCPQIYSDEKPPSLLLPPPSPPRSQCFNFASSPNIIYDAIFGHDIVS 166

[Close]

BLAST of Cp4.1LG01g05470 vs. ExPASy TrEMBL
Match: A0A6J1K2J3 (LOB domain-containing protein 12-like OS=Cucurbita maxima OX=3661 GN=LOC111491818 PE=3 SV=1)

HSP 1 Score: 229 bits (585), Expect = 2.21e-75
Identity = 115/117 (98.29%), Postives = 115/117 (98.29%), Query Frame = 0


Query: 1   MLQELPVQQRGDAVMSLVYEATARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQSEILCF 60
           MLQELPVQQRGDAVMSLVYEATARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQSEILCF
Sbjct: 50  MLQELPVQQRGDAVMSLVYEATARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQSEILCF 109

Query: 61  QMQQDHLVFPNCPQIYSDEKPPSLQLPPPSPPRSQCFNFASSPNVIYDTIFGHDIVS 117
           QMQQDHLVFPNCPQIYSDEKPPSL LPPPSPPRSQCFNFASS NVIYDTIFGHDIVS
Sbjct: 110 QMQQDHLVFPNCPQIYSDEKPPSLLLPPPSPPRSQCFNFASSSNVIYDTIFGHDIVS 166

[Close]

BLAST of Cp4.1LG01g05470 vs. ExPASy TrEMBL
Match: A0A6J1GZ19 (LOB domain-containing protein 12-like OS=Cucurbita moschata OX=3662 GN=LOC111458522 PE=3 SV=1)

HSP 1 Score: 212 bits (539), Expect = 2.25e-68
Identity = 106/117 (90.60%), Postives = 110/117 (94.02%), Query Frame = 0


Query: 1   MLQELPVQQRGDAVMSLVYEATARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQSEILCF 60
           MLQELPVQQRGDAVMSLVYEA+ARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQ+EILC 
Sbjct: 50  MLQELPVQQRGDAVMSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCI 109

Query: 61  QMQQDHLVFPNCPQIYSDEKPPSLQLPPPSPPRSQCFNFASSPNVIYDTIFGHDIVS 117
           QMQQDH VFPNCPQI+SDEKPP+L LPPPS P SQC NFASSPNVIYD IFGHDIVS
Sbjct: 110 QMQQDHPVFPNCPQIHSDEKPPTLLLPPPSSPPSQCLNFASSPNVIYDAIFGHDIVS 166

[Close]

BLAST of Cp4.1LG01g05470 vs. ExPASy TrEMBL
Match: A0A6J1IJ16 (LOB domain-containing protein 12-like OS=Cucurbita maxima OX=3661 GN=LOC111477301 PE=3 SV=1)

HSP 1 Score: 209 bits (533), Expect = 1.85e-67
Identity = 104/117 (88.89%), Postives = 110/117 (94.02%), Query Frame = 0


Query: 1   MLQELPVQQRGDAVMSLVYEATARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQSEILCF 60
           MLQELPVQQRGDAVMSLVYEA+ARVRDPVYGCVGAISYLQ+QVSQLQMQLAVAQ+EILC 
Sbjct: 50  MLQELPVQQRGDAVMSLVYEASARVRDPVYGCVGAISYLQSQVSQLQMQLAVAQAEILCI 109

Query: 61  QMQQDHLVFPNCPQIYSDEKPPSLQLPPPSPPRSQCFNFASSPNVIYDTIFGHDIVS 117
           QMQQDH +FPNCPQI+SDEKPP+L LPPPS P SQC NFASSPNVIYD IFGHDIVS
Sbjct: 110 QMQQDHPIFPNCPQIHSDEKPPTLLLPPPSSPPSQCLNFASSPNVIYDAIFGHDIVS 166

[Close]

BLAST of Cp4.1LG01g05470 vs. ExPASy TrEMBL
Match: A0A0A0KP74 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G215140 PE=3 SV=1)

HSP 1 Score: 209 bits (532), Expect = 2.71e-67
Identity = 107/118 (90.68%), Postives = 111/118 (94.07%), Query Frame = 0


Query: 1   MLQELPVQQRGDAVMSLVYEATARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQSEILCF 60
           MLQELPVQQRGDAVMSLVYEA+ARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQ+EILC 
Sbjct: 50  MLQELPVQQRGDAVMSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCI 109

Query: 61  QMQQDHLVFPNCPQIYSDEKPPSLQLPPPSPPRSQCFNFA-SSPNVIYDTIFGHDIVS 117
           QMQQDH VFPNCPQI+SD+KP SL LPPPSPP SQC NFA SSPNVIYDTIFGHDIVS
Sbjct: 110 QMQQDHPVFPNCPQIHSDDKPSSLLLPPPSPPPSQCLNFAASSPNVIYDTIFGHDIVS 167

[Close]

BLAST of Cp4.1LG01g05470 vs. TAIR 10
Match: AT2G30130.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 109.4 bits (272), Expect = 2.0e-24
Identity = 56/65 (86.15%), Postives = 59/65 (90.77%), Query Frame = 0


Query: 1   MLQELPVQQRGDAVMSLVYEATARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQSEILCF 60
           MLQELPV QR DAV SLV+EA ARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQ+EILC 
Sbjct: 52  MLQELPVHQRADAVNSLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCI 111

Query: 61  QMQQD 66
           QMQ +
Sbjct: 112 QMQNE 116

[Close]

BLAST of Cp4.1LG01g05470 vs. TAIR 10
Match: AT1G31320.1 (LOB domain-containing protein 4 )

HSP 1 Score: 90.9 bits (224), Expect = 7.4e-19
Identity = 52/93 (55.91%), Postives = 65/93 (69.89%), Query Frame = 0


Query: 1   MLQELPVQQRGDAVMSLVYEATARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQSEILCF 60
           MLQELP+ QRGDAV S+VYEA ARVRDPVYGCVGAIS LQ Q+  LQ QLA+AQ+E++  
Sbjct: 57  MLQELPIHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHL 116

Query: 61  QMQQD-----HLVFPNCPQIYSDEKPPSLQLPP 89
           +++Q      H + P+ P   S   P S Q+ P
Sbjct: 117 RVRQSTNFPGHGLCPDSPS--SSGSPSSKQVSP 147

[Close]

BLAST of Cp4.1LG01g05470 vs. TAIR 10
Match: AT1G07900.1 (LOB domain-containing protein 1 )

HSP 1 Score: 82.8 bits (203), Expect = 2.0e-16
Identity = 43/67 (64.18%), Postives = 52/67 (77.61%), Query Frame = 0


Query: 2   LQELPVQQRGDAVMSLVYEATARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQSEILCFQ 61
           LQELP  QR DAV S+VYEA AR+RDPVYGC GAI +LQ QVS+LQ QLA AQ E++  Q
Sbjct: 78  LQELPESQRTDAVNSMVYEAEARIRDPVYGCAGAIYHLQRQVSELQAQLAKAQVEMVNMQ 137

Query: 62  MQQDHLV 69
            Q+ +L+
Sbjct: 138 FQRSNLL 144

[Close]

BLAST of Cp4.1LG01g05470 vs. TAIR 10
Match: AT2G28500.1 (LOB domain-containing protein 11 )

HSP 1 Score: 80.5 bits (197), Expect = 1.0e-15
Identity = 42/67 (62.69%), Postives = 51/67 (76.12%), Query Frame = 0


Query: 2   LQELPVQQRGDAVMSLVYEATARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQSEILCFQ 61
           LQELP  QR DAV S+VYEA AR+RDPVYGC GAI +LQ QVS+LQ QLA  Q E++  Q
Sbjct: 100 LQELPESQRTDAVNSMVYEAGARMRDPVYGCAGAIYHLQRQVSELQAQLAKTQVELVGMQ 159

Query: 62  MQQDHLV 69
           +Q+  L+
Sbjct: 160 LQRSSLL 166

[Close]

BLAST of Cp4.1LG01g05470 vs. TAIR 10
Match: AT5G63090.2 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 75.5 bits (184), Expect = 3.2e-14
Identity = 45/93 (48.39%), Postives = 57/93 (61.29%), Query Frame = 0


Query: 1   MLQELPVQQRGDAVMSLVYEATARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQSEILCF 60
           +L EL   QR DAV SL YEA ARVRDPVYGCVGAISYLQ QV +LQ +L  A +++  +
Sbjct: 55  LLNELLPHQREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHY 114

Query: 61  QMQQDHLVFPN--CPQIYSDEKPPSLQLPPPSP 92
            +       P      ++  +  PS QLPP +P
Sbjct: 115 GLSTSAAGAPGNVVDLVFQPQPLPSQQLPPLNP 147

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g05470 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LBW3	2.8e-23	86.15	LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 S...	[more]
Q9SHE9	1.0e-17	55.91	LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=...	[more]
Q9LQR0	2.8e-15	64.18	LOB domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=LBD1 PE=2 SV=...	[more]
Q9SK08	1.4e-14	62.69	LOB domain-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=LBD11 PE=2 S...	[more]
Q9FML4	4.5e-13	48.39	Protein LATERAL ORGAN BOUNDARIES OS=Arabidopsis thaliana OX=3702 GN=LOB PE=1 SV=...	[more]

BLAST of Cp4.1LG01g05470 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023543167.1	2.36e-77	100.00	LOB domain-containing protein 12-like [Cucurbita pepo subsp. pepo]	[more]
KAG6599972.1	1.59e-75	98.29	LOB domain-containing protein 12, partial [Cucurbita argyrosperma subsp. sororia...	[more]
XP_022941870.1	2.26e-75	97.44	LOB domain-containing protein 12-like [Cucurbita moschata]	[more]
XP_022996637.1	4.56e-75	98.29	LOB domain-containing protein 12-like [Cucurbita maxima]	[more]
XP_038893139.1	4.87e-70	92.31	LOB domain-containing protein 12-like [Benincasa hispida]	[more]

BLAST of Cp4.1LG01g05470 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FV10	1.09e-75	97.44	LOB domain-containing protein 12-like OS=Cucurbita moschata OX=3662 GN=LOC111447...	[more]
A0A6J1K2J3	2.21e-75	98.29	LOB domain-containing protein 12-like OS=Cucurbita maxima OX=3661 GN=LOC11149181...	[more]
A0A6J1GZ19	2.25e-68	90.60	LOB domain-containing protein 12-like OS=Cucurbita moschata OX=3662 GN=LOC111458...	[more]
A0A6J1IJ16	1.85e-67	88.89	LOB domain-containing protein 12-like OS=Cucurbita maxima OX=3661 GN=LOC11147730...	[more]
A0A0A0KP74	2.71e-67	90.68	LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G215140 PE=3 SV...	[more]

BLAST of Cp4.1LG01g05470 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G30130.1	2.0e-24	86.15	Lateral organ boundaries (LOB) domain family protein	[more]
AT1G31320.1	7.4e-19	55.91	LOB domain-containing protein 4	[more]
AT1G07900.1	2.0e-16	64.18	LOB domain-containing protein 1	[more]
AT2G28500.1	1.0e-15	62.69	LOB domain-containing protein 11	[more]
AT5G63090.2	3.2e-14	48.39	Lateral organ boundaries (LOB) domain family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 36..56
None	No IPR available	PANTHER	PTHR31301	LOB DOMAIN-CONTAINING PROTEIN 4-RELATED	coord: 1..73
None	No IPR available	PANTHER	PTHR31301:SF97	LOB DOMAIN-CONTAINING PROTEIN 12-LIKE	coord: 1..73
IPR004883	Lateral organ boundaries, LOB	PFAM	PF03195	LOB	coord: 1..54 e-value: 6.2E-16 score: 58.8
IPR004883	Lateral organ boundaries, LOB	PROSITE	PS50891	LOB	coord: 1..57 score: 11.874473

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g05470.1	Cp4.1LG01g05470.1	mRNA