Cp4.1LG01g05130 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG01g05130
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Descriptionsuppressor protein SRP40-like isoform X1
LocationCp4.1LG01: 887347 .. 889620 (-)
RNA-Seq ExpressionCp4.1LG01g05130
SyntenyCp4.1LG01g05130
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTTTGGGCTTATAAATGGGATTGAACTGTTTCAGGTCTTGCGTGTCTGAAATCTTCACGTGGGTCTGCTTAATCTCTTTCTGTTTTTGATACATATTATCTGTATGTCTGTTTGTCTGACTGGAAAATCTTATCAAGTTCCCTGTTTTGTTTTGTTTTTGGTTTTTTTTTTTTTCTTTTCTTTTGCTTTTTGTGTATATGGGTGTGGGCCGTTAAGAGATAACCATCAGGTTTGGGGAGTAGTTTTGTTCGTTGTCTGACAGAGAAAGCTCCAATTGTTAGCACTATGGAGAACAAGAAGCAAGTGGCTGCCTCTTCATCTTCAACTTCGGATCTTCTTTTTGGTCCCATGGACTCAAATTCAGCGTCTTCAACATCCACCACTGGATATTTTGGCTCTATTTTCCCACAACTGGTTGGTTCTTTAATTTCAACTACTACTAGTTCTTTGTTTTTTTAATCTCCCTTTCTCTCTCAAGATGTGAGTTTCCTGATTTGGGTCATTTTCAGCATTTGCTTCTTGATTTTGCATGTTTCAAGTTGATGATATGACAGCTTAAAAATTCGCAGAATAGGAACGAGAAAGCTTCTAAGCTAGGGAAACAAAGTAATGGAACCTTAATTTCTTCTAGTGGAGATAAAAACTACTTGTTAAAGGGACTCCAAAAGTGGTTCTGTTCTGTTCTGTGTGAAATTTTTTTATGGGATTTCTAAAGCATGCATTGAACTTTTCTTCTCTGGTTTCAGGTTGTGGAAAGAGAGAAAAATCAGGATGTTGGGCCTGGAAAAGTTGGGAATCCAGGTTTCTTTAGCCTTCTAAAACTAGAATTTGAAATTTTGAACACATCTCCCTCACAAAGGATAAGAAGCCTATGTCTACCTTAGCAATCTCTCATGATTTTCTCTGTTGAATGGCTTTACAAACAATATTATCTCCTCCATTTAAGTAAAACTCGTTTTTTATCCTCTCAGATAATGCTTCTGTAAATTGCATGAATGGAACTGGTGGTGCAAATGGGAAAGGTGAAAGCTCCATCTATCTGAACGAAACTATGGAACCAAGTTACTTTAGTTCCTCCATCTTTTACGGTGGCCAAGAAAACTACTCCCCAAGAACTAAACTCTCAGAATCTCACCATAATGTAAGCATTTCAGTATGATGACATGCCATCTTTCTAATAGTTTTCTGTCGTATTTGGATAAAACTAGAAGGCCTTTTGTTGGGATCGTAATGAACAAATAGAATGATTTGATATTGATCGAGTAATATTGGTTTGTTATGTGTCACTGTTGCGTTGATTACTTGATTGCTACTTAATGATGTTATGAACTCAAATACTTTATCAGTTTAAGAAAGAAGAGGACAACGATGCAATTGGAAGCAATTCAAACTCTGCTTCAAGAGGAAACTGGTGGAAGGGTATGACAACTTCCATGGATTTGCTCTTGGAAAAACAAGAGACGATGATGGTTGAGACAATTTTTAACTTGCTATTCTGTTTTTCAGGTTCTCTTTATTACTGACACCCCATCATCCTGGGATTTCCAGCTGCATAGGTAATACCAAACTATCCTCTTCGTTACTCATCGGCGAAACTCGTTCGTCTCTATCATCCATCTAGTTGGCTGACATTCAGTTACTTGATAATGTTTCAGGGCTTGATTATATTATCATTTACAAGTGAAACTACCATATAGAAATAAAGTAGAGTTTGAAGAGGTCCCATGGGTTTGGTCAATGAATGAAAGCTTGTATGGTTCATATAGTGTGGGGATGTTAGTGAATTTTGGCAAGTGTGCGTTCCAAAGCTGAAGAATGCTCTGATGTAGCTTTCTTCTGCATCCAACTTGAACTCTTTTCAATATCTCCATCTTAATCTTTCCTTATTATCTGTTACTGTAATAACTATGTTCACACAGTATCTGATGAGTCTAGTTCAGTTTACTATTATTGTTCCTGCTGCTCCTGCTTGTGATTCCATGGTGATCTAAAGAGAGCCCTTTAAAACCAACCTCCCACTTATGCTTGATGGATATGAACTTCATGAGGTAGGACAATGTTTTAATGATGTGGGTATAACGATAGCAGGTCGTGTTGCTTCGAAACACGATTCGGAGTAATCTTGTTTTCGAGTGCAACATGATAGCTTGTTGGATCGTAACAACTTATTTTCATTTTCTAAGTCAACTACTAATAACTTTCGTATTAAGTTTGGTGTGTTACCTTTTCATTATTGGCCATGATATTTTCTAATCTTCAATCACGAGATAGAG

mRNA sequence

TTTTTGGGCTTATAAATGGGATTGAACTGTTTCAGGTCTTGCGTGTCTGAAATCTTCACAGATAACCATCAGGTTTGGGGAGTAGTTTTGTTCGTTGTCTGACAGAGAAAGCTCCAATTGTTAGCACTATGGAGAACAAGAAGCAAGTGGCTGCCTCTTCATCTTCAACTTCGGATCTTCTTTTTGGTCCCATGGACTCAAATTCAGCGTCTTCAACATCCACCACTGGATATTTTGGCTCTATTTTCCCACAACTGGTTGTGGAAAGAGAGAAAAATCAGGATGTTGGGCCTGGAAAAGTTGGGAATCCAGATAATGCTTCTGTAAATTGCATGAATGGAACTGGTGGTGCAAATGGGAAAGGTGAAAGCTCCATCTATCTGAACGAAACTATGGAACCAAGTTACTTTAGTTCCTCCATCTTTTACGGTGGCCAAGAAAACTACTCCCCAAGAACTAAACTCTCAGAATCTCACCATAATGTTCTCTTTATTACTGACACCCCATCATCCTGGGATTTCCAGCTGCATAGGGCTTGATTATATTATCATTTACAAGTGAAACTACCATATAGAAATAAAGTAGAGTTTGAAGAGGTCCCATGGGTTTGGTCAATGAATGAAAGCTTGTATGGTTCATATAGTGTGGGGATGTTAGTGAATTTTGGCAAGTGTGCGTTCCAAAGCTGAAGAATGCTCTGATGTAGCTTTCTTCTGCATCCAACTTGAACTCTTTTCAATATCTCCATCTTAATCTTTCCTTATTATCTGTTACTGTAATAACTATGTTCACACAGTATCTGATGAGTCTAGTTCAGTTTACTATTATTGTTCCTGCTGCTCCTGCTTGTGATTCCATGGTGATCTAAAGAGAGCCCTTTAAAACCAACCTCCCACTTATGCTTGATGGATATGAACTTCATGAGGTAGGACAATGTTTTAATGATGTGGGTATAACGATAGCAGGTCGTGTTGCTTCGAAACACGATTCGGAGTAATCTTGTTTTCGAGTGCAACATGATAGCTTGTTGGATCGTAACAACTTATTTTCATTTTCTAAGTCAACTACTAATAACTTTCGTATTAAGTTTGGTGTGTTACCTTTTCATTATTGGCCATGATATTTTCTAATCTTCAATCACGAGATAGAG

Coding sequence (CDS)

ATGGAGAACAAGAAGCAAGTGGCTGCCTCTTCATCTTCAACTTCGGATCTTCTTTTTGGTCCCATGGACTCAAATTCAGCGTCTTCAACATCCACCACTGGATATTTTGGCTCTATTTTCCCACAACTGGTTGTGGAAAGAGAGAAAAATCAGGATGTTGGGCCTGGAAAAGTTGGGAATCCAGATAATGCTTCTGTAAATTGCATGAATGGAACTGGTGGTGCAAATGGGAAAGGTGAAAGCTCCATCTATCTGAACGAAACTATGGAACCAAGTTACTTTAGTTCCTCCATCTTTTACGGTGGCCAAGAAAACTACTCCCCAAGAACTAAACTCTCAGAATCTCACCATAATGTTCTCTTTATTACTGACACCCCATCATCCTGGGATTTCCAGCTGCATAGGGCTTGA

Protein sequence

MENKKQVAASSSSTSDLLFGPMDSNSASSTSTTGYFGSIFPQLVVEREKNQDVGPGKVGNPDNASVNCMNGTGGANGKGESSIYLNETMEPSYFSSSIFYGGQENYSPRTKLSESHHNVLFITDTPSSWDFQLHRA
Homology
[Close]
BLAST of Cp4.1LG01g05130 vs. NCBI nr
Match: KAG6600026.1 (hypothetical protein SDJN03_05259, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 240 bits (613), Expect = 4.11e-79
Identity = 129/158 (81.65%), Postives = 129/158 (81.65%), Query Frame = 0 

Query: 1   MENKKQVAASSSSTSDLLFGPMDSNSASSTSTTGYFGSIFPQLVVEREKNQDVGPGKVGN 60
           MENKKQVAASSSSTSDLLFGPMDSNSASSTSTTGYFGSIFPQLVVEREKNQDVGPGKVGN
Sbjct: 1   MENKKQVAASSSSTSDLLFGPMDSNSASSTSTTGYFGSIFPQLVVEREKNQDVGPGKVGN 60

Query: 61  PDNASVNCMNGTGGANGKGESSIYLNETMEPSYFSSSIFYGGQENYSPRTKLSESHHNVL 120
           PDNASVN MNGTGGANGKGESSIYLNETMEPSYFSSSIFYGGQENYSPRTKLSESHHN  
Sbjct: 61  PDNASVNGMNGTGGANGKGESSIYLNETMEPSYFSSSIFYGGQENYSPRTKLSESHHNFK 120

Query: 121 FITDT----------------------PSSWDFQLHRA 136
              D                       PSSWDFQLHRA
Sbjct: 121 KEEDNDAIGSNSNSASRGNWFSLLLTLPSSWDFQLHRA 158

[Close]
BLAST of Cp4.1LG01g05130 vs. NCBI nr
Match: XP_022941972.1 (uncharacterized protein LOC111447180 [Cucurbita moschata])

HSP 1 Score: 237 bits (604), Expect = 9.67e-78
Identity = 129/159 (81.13%), Postives = 130/159 (81.76%), Query Frame = 0 

Query: 1   MENKKQVAASSSSTSDLLFGPMDSNSASSTSTTGYFGSIFPQLVVEREKNQDVGPGKVGN 60
           MENKKQVAASSSSTSDLLFGPMDSNSASSTSTTGYFGSIFPQLVVEREKNQDVGPGKVGN
Sbjct: 1   MENKKQVAASSSSTSDLLFGPMDSNSASSTSTTGYFGSIFPQLVVEREKNQDVGPGKVGN 60

Query: 61  PDNASVNCMNGTGGANGKGESSIYLNETMEPSYFSSSIFYGGQENYSPRTKLSESHHNV- 120
           P NASVN MNGTGGANGKGESSIYLNETMEPSYFSSSIFYGGQENYSPRTKLSESHHN  
Sbjct: 61  PVNASVNGMNGTGGANGKGESSIYLNETMEPSYFSSSIFYGGQENYSPRTKLSESHHNFK 120

Query: 121 ----------------------LFITDTPSSWDFQLHRA 136
                                 L +T  PSSWDFQLHRA
Sbjct: 121 KEEDNDAIGSNSNSASRGNWFSLLLTP-PSSWDFQLHRA 158

[Close]
BLAST of Cp4.1LG01g05130 vs. NCBI nr
Match: XP_023546730.1 (uncharacterized protein LOC111805742 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 233 bits (595), Expect = 1.58e-76
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0 

Query: 1   MENKKQVAASSSSTSDLLFGPMDSNSASSTSTTGYFGSIFPQLVVEREKNQDVGPGKVGN 60
           MENKKQVAASSSSTSDLLFGPMDSNSASSTSTTGYFGSIFPQLVVEREKNQDVGPGKVGN
Sbjct: 1   MENKKQVAASSSSTSDLLFGPMDSNSASSTSTTGYFGSIFPQLVVEREKNQDVGPGKVGN 60

Query: 61  PDNASVNCMNGTGGANGKGESSIYLNETMEPSYFSSSIFYGGQENYSPRTKLSESHHN 118
           PDNASVNCMNGTGGANGKGESSIYLNETMEPSYFSSSIFYGGQENYSPRTKLSESHHN
Sbjct: 61  PDNASVNCMNGTGGANGKGESSIYLNETMEPSYFSSSIFYGGQENYSPRTKLSESHHN 118

[Close]
BLAST of Cp4.1LG01g05130 vs. NCBI nr
Match: KAG7030695.1 (hypothetical protein SDJN02_04732 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 229 bits (583), Expect = 1.53e-74
Identity = 117/118 (99.15%), Postives = 117/118 (99.15%), Query Frame = 0 

Query: 1   MENKKQVAASSSSTSDLLFGPMDSNSASSTSTTGYFGSIFPQLVVEREKNQDVGPGKVGN 60
           MENKKQVAASSSSTSDLLFGPMDSNSASSTSTTGYFGSIFPQLVVEREKNQDVGPGKVGN
Sbjct: 1   MENKKQVAASSSSTSDLLFGPMDSNSASSTSTTGYFGSIFPQLVVEREKNQDVGPGKVGN 60

Query: 61  PDNASVNCMNGTGGANGKGESSIYLNETMEPSYFSSSIFYGGQENYSPRTKLSESHHN 118
           PDNASVN MNGTGGANGKGESSIYLNETMEPSYFSSSIFYGGQENYSPRTKLSESHHN
Sbjct: 61  PDNASVNGMNGTGGANGKGESSIYLNETMEPSYFSSSIFYGGQENYSPRTKLSESHHN 118

[Close]
BLAST of Cp4.1LG01g05130 vs. NCBI nr
Match: XP_022996680.1 (uncharacterized protein LOC111491851 isoform X1 [Cucurbita maxima])

HSP 1 Score: 224 bits (571), Expect = 7.17e-73
Identity = 115/118 (97.46%), Postives = 115/118 (97.46%), Query Frame = 0 

Query: 1   MENKKQVAASSSSTSDLLFGPMDSNSASSTSTTGYFGSIFPQLVVEREKNQDVGPGKVGN 60
           MENKKQVAASSSSTSDLLFGPMDSNSASSTSTTGYFGSIFPQLVVEREKNQDVGPGKVGN
Sbjct: 1   MENKKQVAASSSSTSDLLFGPMDSNSASSTSTTGYFGSIFPQLVVEREKNQDVGPGKVGN 60

Query: 61  PDNASVNCMNGTGGANGKGESSIYLNETMEPSYFSSSIFYGGQENYSPRTKLSESHHN 118
           PD ASVN MNGTGGANGKGESSIYLNETMEPSYFSSSIFYGGQENYSP TKLSESHHN
Sbjct: 61  PDKASVNGMNGTGGANGKGESSIYLNETMEPSYFSSSIFYGGQENYSPSTKLSESHHN 118

[Close]
BLAST of Cp4.1LG01g05130 vs. ExPASy TrEMBL
Match: A0A6J1FNY5 (uncharacterized protein LOC111447180 OS=Cucurbita moschata OX=3662 GN=LOC111447180 PE=4 SV=1)

HSP 1 Score: 237 bits (604), Expect = 4.68e-78
Identity = 129/159 (81.13%), Postives = 130/159 (81.76%), Query Frame = 0 

Query: 1   MENKKQVAASSSSTSDLLFGPMDSNSASSTSTTGYFGSIFPQLVVEREKNQDVGPGKVGN 60
           MENKKQVAASSSSTSDLLFGPMDSNSASSTSTTGYFGSIFPQLVVEREKNQDVGPGKVGN
Sbjct: 1   MENKKQVAASSSSTSDLLFGPMDSNSASSTSTTGYFGSIFPQLVVEREKNQDVGPGKVGN 60

Query: 61  PDNASVNCMNGTGGANGKGESSIYLNETMEPSYFSSSIFYGGQENYSPRTKLSESHHNV- 120
           P NASVN MNGTGGANGKGESSIYLNETMEPSYFSSSIFYGGQENYSPRTKLSESHHN  
Sbjct: 61  PVNASVNGMNGTGGANGKGESSIYLNETMEPSYFSSSIFYGGQENYSPRTKLSESHHNFK 120

Query: 121 ----------------------LFITDTPSSWDFQLHRA 136
                                 L +T  PSSWDFQLHRA
Sbjct: 121 KEEDNDAIGSNSNSASRGNWFSLLLTP-PSSWDFQLHRA 158

[Close]
BLAST of Cp4.1LG01g05130 vs. ExPASy TrEMBL
Match: A0A6J1K7H1 (uncharacterized protein LOC111491851 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111491851 PE=4 SV=1)

HSP 1 Score: 224 bits (571), Expect = 3.47e-73
Identity = 115/118 (97.46%), Postives = 115/118 (97.46%), Query Frame = 0 

Query: 1   MENKKQVAASSSSTSDLLFGPMDSNSASSTSTTGYFGSIFPQLVVEREKNQDVGPGKVGN 60
           MENKKQVAASSSSTSDLLFGPMDSNSASSTSTTGYFGSIFPQLVVEREKNQDVGPGKVGN
Sbjct: 1   MENKKQVAASSSSTSDLLFGPMDSNSASSTSTTGYFGSIFPQLVVEREKNQDVGPGKVGN 60

Query: 61  PDNASVNCMNGTGGANGKGESSIYLNETMEPSYFSSSIFYGGQENYSPRTKLSESHHN 118
           PD ASVN MNGTGGANGKGESSIYLNETMEPSYFSSSIFYGGQENYSP TKLSESHHN
Sbjct: 61  PDKASVNGMNGTGGANGKGESSIYLNETMEPSYFSSSIFYGGQENYSPSTKLSESHHN 118

[Close]
BLAST of Cp4.1LG01g05130 vs. ExPASy TrEMBL
Match: A0A6J1KBQ3 (uncharacterized protein LOC111491851 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111491851 PE=4 SV=1)

HSP 1 Score: 223 bits (568), Expect = 9.95e-73
Identity = 114/118 (96.61%), Postives = 115/118 (97.46%), Query Frame = 0 

Query: 1   MENKKQVAASSSSTSDLLFGPMDSNSASSTSTTGYFGSIFPQLVVEREKNQDVGPGKVGN 60
           MENKKQVAASSSSTSDLLFGPMDSNSASSTSTTGYFGSIFPQLV+EREKNQDVGPGKVGN
Sbjct: 1   MENKKQVAASSSSTSDLLFGPMDSNSASSTSTTGYFGSIFPQLVLEREKNQDVGPGKVGN 60

Query: 61  PDNASVNCMNGTGGANGKGESSIYLNETMEPSYFSSSIFYGGQENYSPRTKLSESHHN 118
           PD ASVN MNGTGGANGKGESSIYLNETMEPSYFSSSIFYGGQENYSP TKLSESHHN
Sbjct: 61  PDKASVNGMNGTGGANGKGESSIYLNETMEPSYFSSSIFYGGQENYSPSTKLSESHHN 118

[Close]
BLAST of Cp4.1LG01g05130 vs. ExPASy TrEMBL
Match: A0A6J1CC52 (uncharacterized protein LOC111010132 OS=Momordica charantia OX=3673 GN=LOC111010132 PE=4 SV=1)

HSP 1 Score: 174 bits (440), Expect = 3.63e-53
Identity = 95/122 (77.87%), Postives = 99/122 (81.15%), Query Frame = 0 

Query: 1   MENKKQVAASSSSTSDLLFGPMDSNSASSTSTTGYFGSIFPQLVVEREKNQDVGPG---- 60
           ME KKQVAASSSS+ D LFGPMDSNSASSTST GYFGSIFP  VVERE+ QDVG      
Sbjct: 1   MEXKKQVAASSSSSLDHLFGPMDSNSASSTSTAGYFGSIFPPPVVERERKQDVGNRXGTC 60

Query: 61  KVGNPDNASVNCMNGTGGANGKGESSIYLNETMEPSYFSSSIFYGGQENYSPRTKLSESH 118
            VGNPDNAS+N  NGTGGA GK  SS+Y NETM PSYFSSSI YGGQENYSPRTK SESH
Sbjct: 61  NVGNPDNASLNGKNGTGGATGKDASSMYQNETMGPSYFSSSILYGGQENYSPRTKASESH 120

[Close]
BLAST of Cp4.1LG01g05130 vs. ExPASy TrEMBL
Match: A0A0A0KNZ9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G188900 PE=4 SV=1)

HSP 1 Score: 168 bits (425), Expect = 3.58e-50
Identity = 91/123 (73.98%), Postives = 102/123 (82.93%), Query Frame = 0 

Query: 1   MENKK-QVAASSSSTSDLLFGPMDSNSASSTSTTGYFGSIFPQLVVEREKNQDVGP---- 60
           MENKK QVA SSSS+ D +FGPMDSNSASSTSTTGYFGS+FP  VVERE+ +DVG     
Sbjct: 1   MENKKLQVATSSSSSLDHIFGPMDSNSASSTSTTGYFGSMFPPPVVERERKKDVGNQVSI 60

Query: 61  GKVGNPDNASVNCMNGTGGANGKGESSIYLNETMEPSYFSSSIFYGGQENYSPRTKLSES 118
            +VGNPDNA++N   GTGGA+GK ESS+Y NETMEPSYFSSSIFYGGQENYSPRT  S+S
Sbjct: 61  AEVGNPDNATINGKKGTGGASGKDESSMYQNETMEPSYFSSSIFYGGQENYSPRTNASQS 120

[Close]
BLAST of Cp4.1LG01g05130 vs. TAIR 10
Match: AT2G39855.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G55646.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 58.5 bits (140), Expect = 4.7e-09
Identity = 51/127 (40.16%), Postives = 63/127 (49.61%), Query Frame = 0 

Query: 1   MENKKQVAASSSSTS---DLLFGPMDSNSASSTSTTGYFGSIF--PQLVVEREKNQDVGP 60
           M+ KK V+ SSSS+S   D +FGP  S+S SS STTG F SIF  P  V +       G 
Sbjct: 1   MDKKKSVSGSSSSSSSSLDHIFGPRVSHSYSS-STTGLFKSIFPPPSAVTQGNLTSRNGA 60

Query: 61  GKVGNPDNASVNCMNGTGGANGKGESSIYLNETMEPSYFSSSIFYGGQENYSPRTKLSES 120
            K   P N       G    N K   S    ET  P   SSSI+YGGQ+NYS  T   ++
Sbjct: 61  AKY-QPTNFETPNERGERSKN-KERKSYQSEETQPPCNLSSSIYYGGQDNYSSSTTNPDA 120

Query: 121 HHNVLFI 123
               +F+
Sbjct: 121 VSPYIFV 124

[Close]
BLAST of Cp4.1LG01g05130 vs. TAIR 10
Match: AT3G55646.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G39855.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 57.8 bits (138), Expect = 8.0e-09
Identity = 45/114 (39.47%), Postives = 63/114 (55.26%), Query Frame = 0 

Query: 2   ENKKQVAASSSSTSDL-----LFGPMDSNSASSTSTTGYFGSIFPQLVVEREKNQDVGPG 61
           +NKK++ ++SSS+S L     +FGP  S S+SS+S TG F SIFP    ++   Q     
Sbjct: 5   KNKKKIVSASSSSSSLSSFDHIFGPRVS-SSSSSSATGLFKSIFPPPSADQLGRQVDFAS 64

Query: 62  KVGNPDNASVNCMNGTGGANGKGESSIYLNETMEPSYFSSSIFYGGQENYSPRT 111
           + G+    S N       +N K + S Y  ET  P + SSS++YGGQE YS  T
Sbjct: 65  QGGHVKYQSPNAKGER--SNKKEKKSYYNEETEPPCHLSSSLYYGGQETYSSTT 115

[Close]
BLAST of Cp4.1LG01g05130 vs. TAIR 10
Match: AT2G39855.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G55646.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 57.0 bits (136), Expect = 1.4e-08
Identity = 50/115 (43.48%), Postives = 58/115 (50.43%), Query Frame = 0 

Query: 1   MENKKQVAASSSSTS---DLLFGPMDSNSASSTSTTGYFGSIF--PQLVVEREKNQDVGP 60
           M+ KK V+ SSSS+S   D +FGP  S+S SS STTG F SIF  P  V +       G 
Sbjct: 1   MDKKKSVSGSSSSSSSSLDHIFGPRVSHSYSS-STTGLFKSIFPPPSAVTQGNLTSRNGA 60

Query: 61  GKVGNPDNASVNCMNGTGGANGKGESSIYLNETMEPSYFSSSIFYGGQENYSPRT 111
            K   P N       G    N K   S    ET  P   SSSI+YGGQ+NYS  T
Sbjct: 61  AKY-QPTNFETPNERGERSKN-KERKSYQSEETQPPCNLSSSIYYGGQDNYSSST 112

[Close]
BLAST of Cp4.1LG01g05130 vs. TAIR 10
Match: AT5G05965.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G39855.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 53.9 bits (128), Expect = 1.2e-07
Identity = 49/110 (44.55%), Postives = 58/110 (52.73%), Query Frame = 0 

Query: 1   MENKKQVAASSSSTS--DLLFGPMDSNSASSTSTTGYFGSIFPQLVVEREKNQDVGPGKV 60
           M+ KK  AASSS +S  D LFGP  S SASS ST     SIFP   V R+K     P   
Sbjct: 1   MDIKKTKAASSSHSSSFDNLFGPKGSASASSCST--ILDSIFPP-PVARKKGSHTAPEVQ 60

Query: 61  GNPDNASVNCMNGTGGANGKGESSIYLNETMEPSYFSSSIFYGGQENYSP 109
           GN   A+              E S +  E  E SY+SSSI+YGGQ++YSP
Sbjct: 61  GNISQAT-------------DERSSH--EKRESSYYSSSIYYGGQQHYSP 92

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g05130 vs.
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG01g05130 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6600026.14.11e-7981.65hypothetical protein SDJN03_05259, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022941972.19.67e-7881.13uncharacterized protein LOC111447180 [Cucurbita moschata][more]
XP_023546730.11.58e-76100.00uncharacterized protein LOC111805742 [Cucurbita pepo subsp. pepo][more]
KAG7030695.11.53e-7499.15hypothetical protein SDJN02_04732 [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_022996680.17.17e-7397.46uncharacterized protein LOC111491851 isoform X1 [Cucurbita maxima][more]
BLAST of Cp4.1LG01g05130 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1FNY54.68e-7881.13uncharacterized protein LOC111447180 OS=Cucurbita moschata OX=3662 GN=LOC1114471... [more]
A0A6J1K7H13.47e-7397.46uncharacterized protein LOC111491851 isoform X1 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1KBQ39.95e-7396.61uncharacterized protein LOC111491851 isoform X2 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1CC523.63e-5377.87uncharacterized protein LOC111010132 OS=Momordica charantia OX=3673 GN=LOC111010... [more]
A0A0A0KNZ93.58e-5073.98Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G188900 PE=4 SV=1[more]
BLAST of Cp4.1LG01g05130 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G39855.14.7e-0940.16unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT3G55646.18.0e-0939.47unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT2G39855.21.4e-0843.48unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT5G05965.11.2e-0744.55unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..33
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 50..73
NoneNo IPR availablePANTHERPTHR33738EMB|CAB82975.1coord: 1..119
NoneNo IPR availablePANTHERPTHR33738:SF21PLANT/PROTEIN-RELATEDcoord: 1..119

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g05130.1Cp4.1LG01g05130.1mRNA