Cp4.1LG01g05030 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG01g05030
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	RING-type E3 ubiquitin transferase
Location	Cp4.1LG01: 971342 .. 972511 (+)
RNA-Seq Expression	Cp4.1LG01g05030
Synteny	Cp4.1LG01g05030

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGTCGATGGCGGCGGCGTCGTCCTACTGGTGTTATCGATGCAGTCGATTTGTTAGGGCTTCGAATCAGGAATCTGTTGTGTGCCCTGATTGTAATAGTGGGTTCGTTGAACAAATTGATCATCCATTGAGCTTGCGGAATATGGAAACGGCGCCGCGGAGGAGGTTTCCAGCGTCGGCGATGTATATGATTGGTCATCGGTCGAATTCGGGGCAGAATTTGGGATCTGCGATTCGGAGACCTCGAAGGAATGGAGGGGATCGATCGCCGTTTAATCCTGTCATAGTTCTTCGTGGGCCGCCTGATGGAAGTGAAGGTGGAGAAAGTCGTCGGTTCGAGCTTTATTACGATGATGGTACTGGTTCTGGCCTGAGACCTCTGCCTCCGAGTATGTCGGAGTTTTTGTTAGGGTCAGGGTTTGATAGGCTTCTGGAGCAACTTTCTCAGATTGAAATGAACAGCATTGGGCAATTTGAAACCCCACCAGCGTCCAAATCTGCGATTGAGTCAATGCCCACTATTCGAATCTGTGAAAATCATTTGGAAACTGAGTCGCACTGTGCTGTTTGTAAAGAGGCATTCGAATTGGGAAACGAAGCACGGGAGATGCCCTGCACGCACATCTACCATTCTGATTGCATTCTACCTTGGCTTTCAATTCGAAATTCCTGTCCGGTATGTCGCCACGAACTGCCTTCGGATAACCCAGACTCTTTGGATGCTGCTGAAATTGGCGTGAATGGGGGTTCGATTACCTCAAATGTGGATGAGAATGGGGGGTTAACCATATGGAGGCTCCCAGGTGGGGGGTTTGCGGTAGGGCGGTTCCATGGGGGGAGGAGAGGTGGGGAGAGAGAGCTCCCTGTTGTGTACACCGAGGTGGATGGTGCTTTTACAAATGGCGGCGTTCCTAGAAGGGTATCAATTGGATCGAGACGCGGGAGAGGGAGGGAAGGAGGCGGGTGGAGGCGCTTTGTTCGCAATATGTTTGGATGTTTCAGGCAGCAACAACCAATGAGGTCGTCTGCGGCATATACTTCAAGTTCCAGCCCTGATTCTGGTCCTTCAAGGAGTAGTAGTAGTAGACCACTCCCGCAGATGAACACAGAGCCAAGGCAACGGCGGACATGGTCTATGGAGGTTAACAGCGGGACAATCAGCTGGTGA

mRNA sequence

ATGTCGTCGATGGCGGCGGCGTCGTCCTACTGGTGTTATCGATGCAGTCGATTTGTTAGGGCTTCGAATCAGGAATCTGTTGTGTGCCCTGATTGTAATAGTGGGTTCGTTGAACAAATTGATCATCCATTGAGCTTGCGGAATATGGAAACGGCGCCGCGGAGGAGGTTTCCAGCGTCGGCGATGTATATGATTGGTCATCGGTCGAATTCGGGGCAGAATTTGGGATCTGCGATTCGGAGACCTCGAAGGAATGGAGGGGATCGATCGCCGTTTAATCCTGTCATAGTTCTTCGTGGGCCGCCTGATGGAAGTGAAGGTGGAGAAAGTCGTCGGTTCGAGCTTTATTACGATGATGGTACTGGTTCTGGCCTGAGACCTCTGCCTCCGAGTATGTCGGAGTTTTTGTTAGGGTCAGGGTTTGATAGGCTTCTGGAGCAACTTTCTCAGATTGAAATGAACAGCATTGGGCAATTTGAAACCCCACCAGCGTCCAAATCTGCGATTGAGTCAATGCCCACTATTCGAATCTGTGAAAATCATTTGGAAACTGAGTCGCACTGTGCTGTTTGTAAAGAGGCATTCGAATTGGGAAACGAAGCACGGGAGATGCCCTGCACGCACATCTACCATTCTGATTGCATTCTACCTTGGCTTTCAATTCGAAATTCCTGTCCGGTATGTCGCCACGAACTGCCTTCGGATAACCCAGACTCTTTGGATGCTGCTGAAATTGGCGTGAATGGGGGTTCGATTACCTCAAATGTGGATGAGAATGGGGGGTTAACCATATGGAGGCTCCCAGGTGGGGGGTTTGCGGTAGGGCGGTTCCATGGGGGGAGGAGAGGTGGGGAGAGAGAGCTCCCTGTTGTGTACACCGAGGTGGATGGTGCTTTTACAAATGGCGGCGTTCCTAGAAGGGTATCAATTGGATCGAGACGCGGGAGAGGGAGGGAAGGAGGCGGGTGGAGGCGCTTTGTTCGCAATATGTTTGGATGTTTCAGGCAGCAACAACCAATGAGGTCGTCTGCGGCATATACTTCAAGTTCCAGCCCTGATTCTGGTCCTTCAAGGAGTAGTAGTAGTAGACCACTCCCGCAGATGAACACAGAGCCAAGGCAACGGCGGACATGGTCTATGGAGGTTAACAGCGGGACAATCAGCTGGTGA

Coding sequence (CDS)

ATGTCGTCGATGGCGGCGGCGTCGTCCTACTGGTGTTATCGATGCAGTCGATTTGTTAGGGCTTCGAATCAGGAATCTGTTGTGTGCCCTGATTGTAATAGTGGGTTCGTTGAACAAATTGATCATCCATTGAGCTTGCGGAATATGGAAACGGCGCCGCGGAGGAGGTTTCCAGCGTCGGCGATGTATATGATTGGTCATCGGTCGAATTCGGGGCAGAATTTGGGATCTGCGATTCGGAGACCTCGAAGGAATGGAGGGGATCGATCGCCGTTTAATCCTGTCATAGTTCTTCGTGGGCCGCCTGATGGAAGTGAAGGTGGAGAAAGTCGTCGGTTCGAGCTTTATTACGATGATGGTACTGGTTCTGGCCTGAGACCTCTGCCTCCGAGTATGTCGGAGTTTTTGTTAGGGTCAGGGTTTGATAGGCTTCTGGAGCAACTTTCTCAGATTGAAATGAACAGCATTGGGCAATTTGAAACCCCACCAGCGTCCAAATCTGCGATTGAGTCAATGCCCACTATTCGAATCTGTGAAAATCATTTGGAAACTGAGTCGCACTGTGCTGTTTGTAAAGAGGCATTCGAATTGGGAAACGAAGCACGGGAGATGCCCTGCACGCACATCTACCATTCTGATTGCATTCTACCTTGGCTTTCAATTCGAAATTCCTGTCCGGTATGTCGCCACGAACTGCCTTCGGATAACCCAGACTCTTTGGATGCTGCTGAAATTGGCGTGAATGGGGGTTCGATTACCTCAAATGTGGATGAGAATGGGGGGTTAACCATATGGAGGCTCCCAGGTGGGGGGTTTGCGGTAGGGCGGTTCCATGGGGGGAGGAGAGGTGGGGAGAGAGAGCTCCCTGTTGTGTACACCGAGGTGGATGGTGCTTTTACAAATGGCGGCGTTCCTAGAAGGGTATCAATTGGATCGAGACGCGGGAGAGGGAGGGAAGGAGGCGGGTGGAGGCGCTTTGTTCGCAATATGTTTGGATGTTTCAGGCAGCAACAACCAATGAGGTCGTCTGCGGCATATACTTCAAGTTCCAGCCCTGATTCTGGTCCTTCAAGGAGTAGTAGTAGTAGACCACTCCCGCAGATGAACACAGAGCCAAGGCAACGGCGGACATGGTCTATGGAGGTTAACAGCGGGACAATCAGCTGGTGA

Protein sequence

MSSMAAASSYWCYRCSRFVRASNQESVVCPDCNSGFVEQIDHPLSLRNMETAPRRRFPASAMYMIGHRSNSGQNLGSAIRRPRRNGGDRSPFNPVIVLRGPPDGSEGGESRRFELYYDDGTGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNSIGQFETPPASKSAIESMPTIRICENHLETESHCAVCKEAFELGNEAREMPCTHIYHSDCILPWLSIRNSCPVCRHELPSDNPDSLDAAEIGVNGGSITSNVDENGGLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDGAFTNGGVPRRVSIGSRRGRGREGGGWRRFVRNMFGCFRQQQPMRSSAAYTSSSSPDSGPSRSSSSRPLPQMNTEPRQRRTWSMEVNSGTISW

Homology

[Close]

BLAST of Cp4.1LG01g05030 vs. ExPASy Swiss-Prot
Match: O22283 (Probable E3 ubiquitin-protein ligase RHC2A OS=Arabidopsis thaliana OX=3702 GN=RHC2A PE=2 SV=1)

HSP 1 Score: 319.7 bits (818), Expect = 4.6e-86
Identity = 197/405 (48.64%), Postives = 246/405 (60.74%), Query Frame = 0


Query: 6   AASSYWCYRCSRFVRASNQESVVCPDCNSGFVEQIDHPLSLRNMET----------APRR 65
           A+ SYWCY CSRFV  S  +S+ CPDC+ GF+E I  PL     ++          +P R
Sbjct: 2   ASGSYWCYSCSRFVWVS--DSISCPDCDGGFLELIQEPLDFTPSDSFTTTTTTQHRSPTR 61

Query: 66  RFPASAMYMIGHRSNSGQN--LGSAIRRPRRNGGDRSPFNPVIVLRGPPDG------SEG 125
             P S+       S    N    + + R R N   RSP NPVIVLRG          SEG
Sbjct: 62  FPPPSSSSSTPSASMHADNSPTPTIVTRTRSN---RSP-NPVIVLRGSAAAPSSDVVSEG 121

Query: 126 GESRRFELYYDDGTGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMN---SIGQFETPPA 185
            +   F++YYDDGT SGLRPLPPSM+EFLLGSGFDRLL+Q+SQIE+N   ++   E PPA
Sbjct: 122 LDRSAFQMYYDDGTDSGLRPLPPSMTEFLLGSGFDRLLDQISQIELNTNRNLRSCEHPPA 181

Query: 186 SKSAIESMPTIRICENHL--ETESHCAVCKEAFELGNEAREMPCTHIYHSDCILPWLSIR 245
           SKSAIE++P I I   HL  +++SHCAVCKE F L + AREMPC HIYH DCILPWL+IR
Sbjct: 182 SKSAIEALPLIEIDPTHLLSDSQSHCAVCKENFVLKSSAREMPCNHIYHPDCILPWLAIR 241

Query: 246 NSCPVCRHELPSDNPDSLDAAEIGVNGGSITSNVDENGGLTIWRLPGGGFAVGRFHGGRR 305
           NSCPVCRHELP+++      A +     +     D   GLTIWRLPGGGFAVGR  GG R
Sbjct: 242 NSCPVCRHELPAEDLTDGTGAALTAVTATAEEEEDSAAGLTIWRLPGGGFAVGRIPGGWR 301

Query: 306 GGERELPVVYTEVDGA-FTNGGVPRRVSIGSRRGRGREGGGWRR-------FVRNMFGCF 365
           GG+R +PVVYTEVDG    +  +PRRV+ GSRRG GR+GGG R         +  +FGCF
Sbjct: 302 GGDRMMPVVYTEVDGGRLGDERLPRRVAWGSRRG-GRDGGGSRERGGGFAGRIMRLFGCF 361

Query: 366 R-QQQPMRSSAAYTSSSSPDSGPSRSSSSRPLPQMNTEPRQRRTW 379
                 + ++AA +S S      +R + S  +    +   +RR W
Sbjct: 362 SGSSGSIAAAAAASSGSGSRIRVTRRTRSFSMFSTASSSSRRRNW 399

[Close]

BLAST of Cp4.1LG01g05030 vs. ExPASy Swiss-Prot
Match: Q9SNB6 (E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis thaliana OX=3702 GN=RDUF1 PE=1 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 1.0e-77
Identity = 179/367 (48.77%), Postives = 214/367 (58.31%), Query Frame = 0


Query: 8   SSYWCYRCSRFVRASNQE----SVVCPDCNSGFVEQIDHPLSLRNMETAPRRRFPASAMY 67
           +SYWCY C+RF+     +     V+CP CN GF+E+I+   S  +   A     P     
Sbjct: 29  TSYWCYSCTRFISVWEDQDANAGVLCPYCNGGFIEEIED--SSNSTVAAIPASTPEVRSV 88

Query: 68  MIGHRSNSGQNLGSAIRRPRRNGGDRSPFNPVIVLRGPPDGSEG------------GESR 127
              HR        S IRR R N   R+ FNPVIVL G   G  G             E R
Sbjct: 89  EETHR--------SIIRRRRSN--RRTSFNPVIVLHGGGGGGAGERVENEEGDGATRERR 148

Query: 128 RFELYYDDGTGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEM--NSIGQFETPPASKSAI 187
            +E YYDDG+GSGLRPLP S+SE L+GSGF+RLLEQLSQIE   N IG+   PPASKSAI
Sbjct: 149 AYEFYYDDGSGSGLRPLPDSVSEILMGSGFERLLEQLSQIEASGNGIGRSGNPPASKSAI 208

Query: 188 ESMPTIRICENHLETESHCAVCKEAFELGNEAREMPCTHIYHSDCILPWLSIRNSCPVCR 247
           ES+P + I + H + E++CAVC E FE G E REMPC HI+H DCI+PWLSIRNSCPVCR
Sbjct: 209 ESLPRVEISDCHTKAEANCAVCTEVFEAGIEGREMPCKHIFHGDCIVPWLSIRNSCPVCR 268

Query: 248 HELPSDNPDSLDAAEIGVNGGSITSNVDENG-GLTIWRLPGGGFAVGRFHGGRRGGEREL 307
            ELPSD                  SN +E+  G+TIWRLPGGGFAVGRF+ G R GER L
Sbjct: 269 FELPSDPIQ--------------RSNEEEHAVGMTIWRLPGGGFAVGRFNAGVREGERIL 328

Query: 308 PVVYTEVDGA--FTNGGVPRRVS---------IGSRRGRGREGGGWRRFVRNMFGCFRQQ 345
           PVV TE+DG    +N G PRR+S         +    GR   GG  RR VR M    R+ 
Sbjct: 329 PVVLTEMDGGGLGSNEG-PRRISWVRAHETPEMSRNGGRSGNGGRLRRAVRGMVSFMRRV 368

[Close]

BLAST of Cp4.1LG01g05030 vs. ExPASy Swiss-Prot
Match: Q940T5 (E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana OX=3702 GN=DURF2 PE=1 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 1.7e-77
Identity = 194/418 (46.41%), Postives = 239/418 (57.18%), Query Frame = 0


Query: 8   SSYWCYRCSRFVR------ASNQESVVCPDCNSGFVEQIDHPLSLRNMETAPRRRFPASA 67
           +SYWCY C+RFV        +   SV CP C+ GF+EQI+   S      A     PAS 
Sbjct: 16  ASYWCYSCTRFVSVWADQGTTTVGSVACPHCDGGFIEQINDSSS-----AATELTIPAST 75

Query: 68  MYMIGHRSNSGQNLGSAIRRPRRNGGDRSPFNPVIVLRGPPDGSEGGES-------RRFE 127
                   +   N  S IR  RR  G R  FNPVIVL+G     E GE        R FE
Sbjct: 76  -----EVRSINNNRRSVIR--RRRSGRRPSFNPVIVLQGGAGEREEGEEGDAARDRRAFE 135

Query: 128 LYYDDGTGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNS--IGQFETPPASKSAIESM 187
            YYDDG+GSGLRPLP S+SE L+GSGF+RLLEQLSQIE ++  IG+   PPASKSAIES+
Sbjct: 136 FYYDDGSGSGLRPLPDSVSEILMGSGFERLLEQLSQIEASATGIGRSGNPPASKSAIESL 195

Query: 188 PTIRICENHLETESHCAVCKEAFELGNEAREMPCTHIYHSDCILPWLSIRNSCPVCRHEL 247
           P + I + H+ +E++CAVC E FE   EAREMPC H++H DCI+PWLSIRNSCPVCR EL
Sbjct: 196 PRVEISDCHIGSEANCAVCTEIFETETEAREMPCKHLFHDDCIVPWLSIRNSCPVCRFEL 255

Query: 248 PSDNPDSLDAAEIGVNGGSITSNVDENGGLTIWRLPGGGFAVGRFHGGRRGGERELPVVY 307
           PS+            N  S  +  D   G+TIWRLPGGGFAVGRF+   R GER LPVV 
Sbjct: 256 PSE-----------PNRRSNNNEEDNAVGMTIWRLPGGGFAVGRFNAAMRDGERVLPVVL 315

Query: 308 TEVDGAFTNGGV------PRRV------------SIGSRRGRGREGGGWRRFVRNMFGCF 367
           TE+DG    GG+      PRR+            S G+  G G  GG  RR VR M    
Sbjct: 316 TEMDG----GGIGNSQDGPRRISWVRSHGTLESDSNGTGSGSG-SGGRLRRMVRGMVSLM 375

Query: 368 RQQQPMR---SSAAYTSSSSPDSGPSRSSSSRPLPQMNTEPRQ--RRTWSMEVNSGTI 388
           R+ +P R   SS+A  S+SS +   +    SR L + N+  R+  RR  S   +S ++
Sbjct: 376 RRVRPNRSSSSSSAAISTSSDNLDLNIEVESRVLDRSNSVMRRYFRRNRSNRDSSSSV 405

[Close]

BLAST of Cp4.1LG01g05030 vs. ExPASy Swiss-Prot
Match: P0CH30 (E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 1.9e-36
Identity = 91/278 (32.73%), Postives = 147/278 (52.88%), Query Frame = 0


Query: 10  YWCYRCSRFVRAS---NQESVVCPDCNSGFVEQIDHPLSLR-------NMETAPRR---- 69
           ++CY+C+R V  +         CP CN GF+E+ D+P   +       N  + P      
Sbjct: 23  FFCYQCNRTVNVTISPPSSDPTCPICNEGFLEEYDNPNPNQGSGFLNPNPNSIPFHDLFL 82

Query: 70  ------------RFPASAMYMIGHRSNSGQNLGSAIRRPRRNGGDRSPFNPVIVLRGPPD 129
                        FP+S+       ++   N  S     R   GD   F+P   ++   +
Sbjct: 83  TLSDPFASLLPLLFPSSSSTTTSSSASIDPNNPSLSGPTRSGRGDPFAFDPFTFIQNHLN 142

Query: 130 GSEGGESRRFELYYDDGTGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNSIGQFETPP 189
                 ++   +  ++ +  G R LP ++ ++ +G G ++L++QL++ + N  G   TPP
Sbjct: 143 DLRSSGAQIEFVIQNNPSDQGFR-LPANIGDYFIGPGLEQLIQQLAENDPNRYG---TPP 202

Query: 190 ASKSAIESMPTIRICENHLETE-SHCAVCKEAFELGNEAREMPCTHIYHSDCILPWLSIR 249
           ASKSAIE++P + I +++L +E + CAVC + FE G EA++MPC H+YH DC+LPWL + 
Sbjct: 203 ASKSAIEALPLVNITKSNLNSEFNQCAVCMDDFEEGTEAKQMPCKHLYHKDCLLPWLELH 262

Query: 250 NSCPVCRHELPSDNPDSLDAAEIGVNGGSITSNVDENG 261
           NSCPVCRHELP+D+PD  +    G  G S  ++ D +G
Sbjct: 263 NSCPVCRHELPTDDPD-YERRVRGAQGTSGGNDGDNSG 295

[Close]

BLAST of Cp4.1LG01g05030 vs. ExPASy Swiss-Prot
Match: Q8LPN7 (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 4.5e-33
Identity = 79/250 (31.60%), Postives = 137/250 (54.80%), Query Frame = 0


Query: 10  YWCYRCSRFVRASNQESV--VCPDCNSGFVEQIDHPLSLRNMETAPRRR---FPAS---- 69
           ++CY+C++ V  S   S    CP CN GF+E+ + P   +++   P      FP +    
Sbjct: 21  FFCYQCNQTVTISISSSADPFCPICNQGFLEEYEDPNPNQSLNFNPNSSDSFFPMADPFS 80

Query: 70  ----AMYMIGHRSNSGQNLGSAI---RRPRRNGGDRSP----FNPVIVLRGPPDGSEGGE 129
                ++     + SG +  S      +P+     ++P    F+P   L+     +    
Sbjct: 81  TLLPLIFGSSAAAPSGMDFMSLFGPSMQPQARSTQQNPQSDAFDPFTFLQNHLQ-TLRSS 140

Query: 130 SRRFELYYDDGTGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNSIGQFETPPASKSAI 189
              FE   ++        +P +  ++  G G ++L++QL++ + N  G   TPPASKSAI
Sbjct: 141 GTHFEFVIENHPSDPGNRMPGNFGDYFFGPGLEQLIQQLAENDPNRYG---TPPASKSAI 200

Query: 190 ESMPTIRICENHLETE-SHCAVCKEAFELGNEAREMPCTHIYHSDCILPWLSIRNSCPVC 239
           +++PT+++ ++ L++E + CAVC + FE G++ ++MPC H++H DC+LPWL + NSCPVC
Sbjct: 201 DALPTVKVTKDMLKSEMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELHNSCPVC 260

[Close]

BLAST of Cp4.1LG01g05030 vs. NCBI nr
Match: XP_023514100.1 (probable E3 ubiquitin-protein ligase RHC2A [Cucurbita pepo subsp. pepo])

HSP 1 Score: 792 bits (2046), Expect = 1.92e-289
Identity = 389/389 (100.00%), Postives = 389/389 (100.00%), Query Frame = 0


Query: 1   MSSMAAASSYWCYRCSRFVRASNQESVVCPDCNSGFVEQIDHPLSLRNMETAPRRRFPAS 60
           MSSMAAASSYWCYRCSRFVRASNQESVVCPDCNSGFVEQIDHPLSLRNMETAPRRRFPAS
Sbjct: 1   MSSMAAASSYWCYRCSRFVRASNQESVVCPDCNSGFVEQIDHPLSLRNMETAPRRRFPAS 60

Query: 61  AMYMIGHRSNSGQNLGSAIRRPRRNGGDRSPFNPVIVLRGPPDGSEGGESRRFELYYDDG 120
           AMYMIGHRSNSGQNLGSAIRRPRRNGGDRSPFNPVIVLRGPPDGSEGGESRRFELYYDDG
Sbjct: 61  AMYMIGHRSNSGQNLGSAIRRPRRNGGDRSPFNPVIVLRGPPDGSEGGESRRFELYYDDG 120

Query: 121 TGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNSIGQFETPPASKSAIESMPTIRICEN 180
           TGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNSIGQFETPPASKSAIESMPTIRICEN
Sbjct: 121 TGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNSIGQFETPPASKSAIESMPTIRICEN 180

Query: 181 HLETESHCAVCKEAFELGNEAREMPCTHIYHSDCILPWLSIRNSCPVCRHELPSDNPDSL 240
           HLETESHCAVCKEAFELGNEAREMPCTHIYHSDCILPWLSIRNSCPVCRHELPSDNPDSL
Sbjct: 181 HLETESHCAVCKEAFELGNEAREMPCTHIYHSDCILPWLSIRNSCPVCRHELPSDNPDSL 240

Query: 241 DAAEIGVNGGSITSNVDENGGLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDGAFT 300
           DAAEIGVNGGSITSNVDENGGLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDGAFT
Sbjct: 241 DAAEIGVNGGSITSNVDENGGLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDGAFT 300

Query: 301 NGGVPRRVSIGSRRGRGREGGGWRRFVRNMFGCFRQQQPMRSSAAYTSSSSPDSGPSRSS 360
           NGGVPRRVSIGSRRGRGREGGGWRRFVRNMFGCFRQQQPMRSSAAYTSSSSPDSGPSRSS
Sbjct: 301 NGGVPRRVSIGSRRGRGREGGGWRRFVRNMFGCFRQQQPMRSSAAYTSSSSPDSGPSRSS 360

Query: 361 SSRPLPQMNTEPRQRRTWSMEVNSGTISW 389
           SSRPLPQMNTEPRQRRTWSMEVNSGTISW
Sbjct: 361 SSRPLPQMNTEPRQRRTWSMEVNSGTISW 389

[Close]

BLAST of Cp4.1LG01g05030 vs. NCBI nr
Match: KAG6600041.1 (putative E3 ubiquitin-protein ligase RHC2A, partial [Cucurbita argyrosperma subsp. sororia] >KAG7030710.1 putative E3 ubiquitin-protein ligase RHC2A, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 775 bits (2001), Expect = 1.34e-282
Identity = 383/389 (98.46%), Postives = 384/389 (98.71%), Query Frame = 0


Query: 1   MSSMAAASSYWCYRCSRFVRASNQESVVCPDCNSGFVEQIDHPLSLRNMETAPRRRFPAS 60
           MSSMAAASSYWCYRCSRFVRASNQESVVCPDCNSGFVEQIDHPLSLRNMETAPRRRFPAS
Sbjct: 1   MSSMAAASSYWCYRCSRFVRASNQESVVCPDCNSGFVEQIDHPLSLRNMETAPRRRFPAS 60

Query: 61  AMYMIGHRSNSGQNLGSAIRRPRRNGGDRSPFNPVIVLRGPPDGSEGGESRRFELYYDDG 120
           AMYMIGHRSNSGQNLGSAIRRPRRNGGDRSPFNPVIVLRGPPDGSEGGESRRFELYYDDG
Sbjct: 61  AMYMIGHRSNSGQNLGSAIRRPRRNGGDRSPFNPVIVLRGPPDGSEGGESRRFELYYDDG 120

Query: 121 TGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNSIGQFETPPASKSAIESMPTIRICEN 180
           TGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNSIGQFETPPASKSAIESMPTIRICEN
Sbjct: 121 TGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNSIGQFETPPASKSAIESMPTIRICEN 180

Query: 181 HLETESHCAVCKEAFELGNEAREMPCTHIYHSDCILPWLSIRNSCPVCRHELPSDNPDSL 240
           HLETESHCAVCKEAFELGNEAREMPCTHIYHSDCILPWLSIRNSCPVCRHELPSDN DSL
Sbjct: 181 HLETESHCAVCKEAFELGNEAREMPCTHIYHSDCILPWLSIRNSCPVCRHELPSDNQDSL 240

Query: 241 DAAEIGVNGGSITSNVDENGGLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDGAFT 300
           DAAEIGVNGGS+TSNVDENGGLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDGAFT
Sbjct: 241 DAAEIGVNGGSMTSNVDENGGLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDGAFT 300

Query: 301 NGGVPRRVSIGSRRGRGREGGGWRRFVRNMFGCFRQQQPMRSSAAYTSSSSPDSGPSRSS 360
           NGGVPRRVS GSRRGRGRE GGWRRFVRNMFGCFRQQ PMRSSAAYTSSSSPDSGPSRSS
Sbjct: 301 NGGVPRRVSFGSRRGRGRERGGWRRFVRNMFGCFRQQ-PMRSSAAYTSSSSPDSGPSRSS 360

Query: 361 SSRPLPQMNTEPRQRRTWSMEVNSGTISW 389
           SSRPLPQMN EPRQRRTWSMEVNSGTISW
Sbjct: 361 SSRPLPQMNAEPRQRRTWSMEVNSGTISW 388

[Close]

BLAST of Cp4.1LG01g05030 vs. NCBI nr
Match: XP_022941698.1 (probable E3 ubiquitin-protein ligase RHC2A [Cucurbita moschata])

HSP 1 Score: 768 bits (1982), Expect = 1.05e-279
Identity = 380/389 (97.69%), Postives = 381/389 (97.94%), Query Frame = 0


Query: 1   MSSMAAASSYWCYRCSRFVRASNQESVVCPDCNSGFVEQIDHPLSLRNMETAPRRRFPAS 60
           MSSMAAASSYWCYRCSRFVRASNQESVVCPDCNSGFVEQIDHPLSLRNMETAPRRRFPAS
Sbjct: 1   MSSMAAASSYWCYRCSRFVRASNQESVVCPDCNSGFVEQIDHPLSLRNMETAPRRRFPAS 60

Query: 61  AMYMIGHRSNSGQNLGSAIRRPRRNGGDRSPFNPVIVLRGPPDGSEGGESRRFELYYDDG 120
           AMYMIGHRSNS QNLGSAIRRPRRNGGDRSPFNPVIVLRGPPDGSEGGESRRFELYYDDG
Sbjct: 61  AMYMIGHRSNSRQNLGSAIRRPRRNGGDRSPFNPVIVLRGPPDGSEGGESRRFELYYDDG 120

Query: 121 TGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNSIGQFETPPASKSAIESMPTIRICEN 180
           TGSGLRPLPPSMSEFLLGSGFDRLLEQLS IEMNSIGQFETPPASKSAIESMPTIRICEN
Sbjct: 121 TGSGLRPLPPSMSEFLLGSGFDRLLEQLSHIEMNSIGQFETPPASKSAIESMPTIRICEN 180

Query: 181 HLETESHCAVCKEAFELGNEAREMPCTHIYHSDCILPWLSIRNSCPVCRHELPSDNPDSL 240
           HLETESHCAVCKEAFELGNEAREMPCTHIYHSDCILPWLSIRNSCPVCRHELPSDN DSL
Sbjct: 181 HLETESHCAVCKEAFELGNEAREMPCTHIYHSDCILPWLSIRNSCPVCRHELPSDNQDSL 240

Query: 241 DAAEIGVNGGSITSNVDENGGLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDGAFT 300
           DAAEIGVNGGS+TSNVDENGGLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDGAFT
Sbjct: 241 DAAEIGVNGGSMTSNVDENGGLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDGAFT 300

Query: 301 NGGVPRRVSIGSRRGRGREGGGWRRFVRNMFGCFRQQQPMRSSAAYTSSSSPDSGPSRSS 360
           NGGVPRRVS GSRRGRGRE GGWRRFVRNMFGCFRQQ PMRSSAAYTSSSSPDSGPSRSS
Sbjct: 301 NGGVPRRVSFGSRRGRGRERGGWRRFVRNMFGCFRQQ-PMRSSAAYTSSSSPDSGPSRSS 360

Query: 361 SSRPLPQMNTEPRQRRTWSMEVNSGTISW 389
           SSRPLPQMN EPRQRRTWSMEVNSGT SW
Sbjct: 361 SSRPLPQMNAEPRQRRTWSMEVNSGTSSW 388

[Close]

BLAST of Cp4.1LG01g05030 vs. NCBI nr
Match: XP_022995937.1 (probable E3 ubiquitin-protein ligase RHC2A [Cucurbita maxima])

HSP 1 Score: 760 bits (1962), Expect = 1.18e-276
Identity = 375/389 (96.40%), Postives = 380/389 (97.69%), Query Frame = 0


Query: 1   MSSMAAASSYWCYRCSRFVRASNQESVVCPDCNSGFVEQIDHPLSLRNMETAPRRRFPAS 60
           MSSMAAASSYWCYRCSRFVRASNQE+VVCPDCNSGFVEQIDHP+SLRNMETAPRRRFPAS
Sbjct: 1   MSSMAAASSYWCYRCSRFVRASNQEAVVCPDCNSGFVEQIDHPVSLRNMETAPRRRFPAS 60

Query: 61  AMYMIGHRSNSGQNLGSAIRRPRRNGGDRSPFNPVIVLRGPPDGSEGGESRRFELYYDDG 120
           AMYMIGHRSNSGQNLGSAIRRPRRNGGDRSPFNPVIVLRGPPDGSEGGESRRFELYYDDG
Sbjct: 61  AMYMIGHRSNSGQNLGSAIRRPRRNGGDRSPFNPVIVLRGPPDGSEGGESRRFELYYDDG 120

Query: 121 TGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNSIGQFETPPASKSAIESMPTIRICEN 180
           TGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNSIGQFETPPASKSAIESMPTIRICEN
Sbjct: 121 TGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNSIGQFETPPASKSAIESMPTIRICEN 180

Query: 181 HLETESHCAVCKEAFELGNEAREMPCTHIYHSDCILPWLSIRNSCPVCRHELPSDNPDSL 240
           HLETESHCAVCKEAFELGNEAREMPCTHIYHSDCILPWLSIRNSCPVCRHELPSDN DSL
Sbjct: 181 HLETESHCAVCKEAFELGNEAREMPCTHIYHSDCILPWLSIRNSCPVCRHELPSDNQDSL 240

Query: 241 DAAEIGVNGGSITSNVDENGGLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDGAFT 300
           DAAEIGVNGGS+TSNVDENGGLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDGAFT
Sbjct: 241 DAAEIGVNGGSMTSNVDENGGLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDGAFT 300

Query: 301 NGGVPRRVSIGSRRGRGREGGGWRRFVRNMFGCFRQQQPMRSSAAYTSSSSPDSGPSRSS 360
           NGGVPRRVS GSR GRGR  GGWRR VR+MFGCFR Q P+RSS AYTSSSSPDSGPSRSS
Sbjct: 301 NGGVPRRVSFGSRGGRGRVRGGWRRIVRHMFGCFRHQ-PVRSSVAYTSSSSPDSGPSRSS 360

Query: 361 SSRPLPQMNTEPRQRRTWSMEVNSGTISW 389
           SSRPLPQMNTEPRQRRTWSMEVNSGTISW
Sbjct: 361 SSRPLPQMNTEPRQRRTWSMEVNSGTISW 388

[Close]

BLAST of Cp4.1LG01g05030 vs. NCBI nr
Match: XP_022138905.1 (probable E3 ubiquitin-protein ligase RHC2A [Momordica charantia])

HSP 1 Score: 661 bits (1706), Expect = 9.97e-238
Identity = 333/389 (85.60%), Postives = 349/389 (89.72%), Query Frame = 0


Query: 1   MSSMAAASSYWCYRCSRFVRASNQESVVCPDCNSGFVEQIDHPLSLRNMETAPRRRFPAS 60
           MSSMAAASSYWCYRCSRFVR SNQ+SVVCPDCNSGFVEQI+HP  L N+E APRRRFPA+
Sbjct: 1   MSSMAAASSYWCYRCSRFVRVSNQDSVVCPDCNSGFVEQIEHPSRLVNVEAAPRRRFPAA 60

Query: 61  AMYMIGHRSNSGQNLGSAIRRPRRNGGDRSPFNPVIVLRGPPDGSEGGESRRFELYYDDG 120
           AMYMIGHRSNSGQNLGS +RR RRNGGDRS FNPVIVLRGP DGSEGGESRRFELYYDDG
Sbjct: 61  AMYMIGHRSNSGQNLGSGLRRSRRNGGDRSQFNPVIVLRGPSDGSEGGESRRFELYYDDG 120

Query: 121 TGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNSIGQFETPPASKSAIESMPTIRICEN 180
            GSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMN IG+FE PPASK+AIESMPTI+ICEN
Sbjct: 121 GGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFENPPASKAAIESMPTIQICEN 180

Query: 181 HLETESHCAVCKEAFELGNEAREMPCTHIYHSDCILPWLSIRNSCPVCRHELPSDNPDSL 240
           HLETESHCAVCKEAFELGNEAREMPC HIYHSDCILPWLSIRNSCPVCRHELPSDN +S 
Sbjct: 181 HLETESHCAVCKEAFELGNEAREMPCKHIYHSDCILPWLSIRNSCPVCRHELPSDNQNSP 240

Query: 241 DAAEIGVNGGSITSNVDENGGLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDGAFT 300
           DAAE G NGG +TSN +EN GLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDG FT
Sbjct: 241 DAAESGENGGPVTSNGEENVGLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDGGFT 300

Query: 301 NGGVPRRVSIGSRRGRGREGGGWRRFVRNMFGCFRQQQPMRSSAAYTSSSSPDSGPSRSS 360
           NGGVPRRVS  SR GRGRE GGW R +RN+F CF     MRS+A+ TSSS  DSGPSRSS
Sbjct: 301 NGGVPRRVSFASR-GRGRERGGWSRILRNLFACFGGS--MRSTAS-TSSSPTDSGPSRSS 360

Query: 361 SSRPLPQMNTEPRQRRTWSMEVNSGTISW 389
             RPLP  NTEPRQRRTWSMEVNSGT+SW
Sbjct: 361 --RPLPHFNTEPRQRRTWSMEVNSGTMSW 383

[Close]

BLAST of Cp4.1LG01g05030 vs. ExPASy TrEMBL
Match: A0A6J1FSU7 (RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111446981 PE=4 SV=1)

HSP 1 Score: 768 bits (1982), Expect = 5.10e-280
Identity = 380/389 (97.69%), Postives = 381/389 (97.94%), Query Frame = 0


Query: 1   MSSMAAASSYWCYRCSRFVRASNQESVVCPDCNSGFVEQIDHPLSLRNMETAPRRRFPAS 60
           MSSMAAASSYWCYRCSRFVRASNQESVVCPDCNSGFVEQIDHPLSLRNMETAPRRRFPAS
Sbjct: 1   MSSMAAASSYWCYRCSRFVRASNQESVVCPDCNSGFVEQIDHPLSLRNMETAPRRRFPAS 60

Query: 61  AMYMIGHRSNSGQNLGSAIRRPRRNGGDRSPFNPVIVLRGPPDGSEGGESRRFELYYDDG 120
           AMYMIGHRSNS QNLGSAIRRPRRNGGDRSPFNPVIVLRGPPDGSEGGESRRFELYYDDG
Sbjct: 61  AMYMIGHRSNSRQNLGSAIRRPRRNGGDRSPFNPVIVLRGPPDGSEGGESRRFELYYDDG 120

Query: 121 TGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNSIGQFETPPASKSAIESMPTIRICEN 180
           TGSGLRPLPPSMSEFLLGSGFDRLLEQLS IEMNSIGQFETPPASKSAIESMPTIRICEN
Sbjct: 121 TGSGLRPLPPSMSEFLLGSGFDRLLEQLSHIEMNSIGQFETPPASKSAIESMPTIRICEN 180

Query: 181 HLETESHCAVCKEAFELGNEAREMPCTHIYHSDCILPWLSIRNSCPVCRHELPSDNPDSL 240
           HLETESHCAVCKEAFELGNEAREMPCTHIYHSDCILPWLSIRNSCPVCRHELPSDN DSL
Sbjct: 181 HLETESHCAVCKEAFELGNEAREMPCTHIYHSDCILPWLSIRNSCPVCRHELPSDNQDSL 240

Query: 241 DAAEIGVNGGSITSNVDENGGLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDGAFT 300
           DAAEIGVNGGS+TSNVDENGGLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDGAFT
Sbjct: 241 DAAEIGVNGGSMTSNVDENGGLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDGAFT 300

Query: 301 NGGVPRRVSIGSRRGRGREGGGWRRFVRNMFGCFRQQQPMRSSAAYTSSSSPDSGPSRSS 360
           NGGVPRRVS GSRRGRGRE GGWRRFVRNMFGCFRQQ PMRSSAAYTSSSSPDSGPSRSS
Sbjct: 301 NGGVPRRVSFGSRRGRGRERGGWRRFVRNMFGCFRQQ-PMRSSAAYTSSSSPDSGPSRSS 360

Query: 361 SSRPLPQMNTEPRQRRTWSMEVNSGTISW 389
           SSRPLPQMN EPRQRRTWSMEVNSGT SW
Sbjct: 361 SSRPLPQMNAEPRQRRTWSMEVNSGTSSW 388

[Close]

BLAST of Cp4.1LG01g05030 vs. ExPASy TrEMBL
Match: A0A6J1K0D0 (RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111491304 PE=4 SV=1)

HSP 1 Score: 760 bits (1962), Expect = 5.70e-277
Identity = 375/389 (96.40%), Postives = 380/389 (97.69%), Query Frame = 0


Query: 1   MSSMAAASSYWCYRCSRFVRASNQESVVCPDCNSGFVEQIDHPLSLRNMETAPRRRFPAS 60
           MSSMAAASSYWCYRCSRFVRASNQE+VVCPDCNSGFVEQIDHP+SLRNMETAPRRRFPAS
Sbjct: 1   MSSMAAASSYWCYRCSRFVRASNQEAVVCPDCNSGFVEQIDHPVSLRNMETAPRRRFPAS 60

Query: 61  AMYMIGHRSNSGQNLGSAIRRPRRNGGDRSPFNPVIVLRGPPDGSEGGESRRFELYYDDG 120
           AMYMIGHRSNSGQNLGSAIRRPRRNGGDRSPFNPVIVLRGPPDGSEGGESRRFELYYDDG
Sbjct: 61  AMYMIGHRSNSGQNLGSAIRRPRRNGGDRSPFNPVIVLRGPPDGSEGGESRRFELYYDDG 120

Query: 121 TGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNSIGQFETPPASKSAIESMPTIRICEN 180
           TGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNSIGQFETPPASKSAIESMPTIRICEN
Sbjct: 121 TGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNSIGQFETPPASKSAIESMPTIRICEN 180

Query: 181 HLETESHCAVCKEAFELGNEAREMPCTHIYHSDCILPWLSIRNSCPVCRHELPSDNPDSL 240
           HLETESHCAVCKEAFELGNEAREMPCTHIYHSDCILPWLSIRNSCPVCRHELPSDN DSL
Sbjct: 181 HLETESHCAVCKEAFELGNEAREMPCTHIYHSDCILPWLSIRNSCPVCRHELPSDNQDSL 240

Query: 241 DAAEIGVNGGSITSNVDENGGLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDGAFT 300
           DAAEIGVNGGS+TSNVDENGGLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDGAFT
Sbjct: 241 DAAEIGVNGGSMTSNVDENGGLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDGAFT 300

Query: 301 NGGVPRRVSIGSRRGRGREGGGWRRFVRNMFGCFRQQQPMRSSAAYTSSSSPDSGPSRSS 360
           NGGVPRRVS GSR GRGR  GGWRR VR+MFGCFR Q P+RSS AYTSSSSPDSGPSRSS
Sbjct: 301 NGGVPRRVSFGSRGGRGRVRGGWRRIVRHMFGCFRHQ-PVRSSVAYTSSSSPDSGPSRSS 360

Query: 361 SSRPLPQMNTEPRQRRTWSMEVNSGTISW 389
           SSRPLPQMNTEPRQRRTWSMEVNSGTISW
Sbjct: 361 SSRPLPQMNTEPRQRRTWSMEVNSGTISW 388

[Close]

BLAST of Cp4.1LG01g05030 vs. ExPASy TrEMBL
Match: A0A6J1CAT7 (RING-type E3 ubiquitin transferase OS=Momordica charantia OX=3673 GN=LOC111009972 PE=4 SV=1)

HSP 1 Score: 661 bits (1706), Expect = 4.83e-238
Identity = 333/389 (85.60%), Postives = 349/389 (89.72%), Query Frame = 0


Query: 1   MSSMAAASSYWCYRCSRFVRASNQESVVCPDCNSGFVEQIDHPLSLRNMETAPRRRFPAS 60
           MSSMAAASSYWCYRCSRFVR SNQ+SVVCPDCNSGFVEQI+HP  L N+E APRRRFPA+
Sbjct: 1   MSSMAAASSYWCYRCSRFVRVSNQDSVVCPDCNSGFVEQIEHPSRLVNVEAAPRRRFPAA 60

Query: 61  AMYMIGHRSNSGQNLGSAIRRPRRNGGDRSPFNPVIVLRGPPDGSEGGESRRFELYYDDG 120
           AMYMIGHRSNSGQNLGS +RR RRNGGDRS FNPVIVLRGP DGSEGGESRRFELYYDDG
Sbjct: 61  AMYMIGHRSNSGQNLGSGLRRSRRNGGDRSQFNPVIVLRGPSDGSEGGESRRFELYYDDG 120

Query: 121 TGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNSIGQFETPPASKSAIESMPTIRICEN 180
            GSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMN IG+FE PPASK+AIESMPTI+ICEN
Sbjct: 121 GGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFENPPASKAAIESMPTIQICEN 180

Query: 181 HLETESHCAVCKEAFELGNEAREMPCTHIYHSDCILPWLSIRNSCPVCRHELPSDNPDSL 240
           HLETESHCAVCKEAFELGNEAREMPC HIYHSDCILPWLSIRNSCPVCRHELPSDN +S 
Sbjct: 181 HLETESHCAVCKEAFELGNEAREMPCKHIYHSDCILPWLSIRNSCPVCRHELPSDNQNSP 240

Query: 241 DAAEIGVNGGSITSNVDENGGLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDGAFT 300
           DAAE G NGG +TSN +EN GLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDG FT
Sbjct: 241 DAAESGENGGPVTSNGEENVGLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDGGFT 300

Query: 301 NGGVPRRVSIGSRRGRGREGGGWRRFVRNMFGCFRQQQPMRSSAAYTSSSSPDSGPSRSS 360
           NGGVPRRVS  SR GRGRE GGW R +RN+F CF     MRS+A+ TSSS  DSGPSRSS
Sbjct: 301 NGGVPRRVSFASR-GRGRERGGWSRILRNLFACFGGS--MRSTAS-TSSSPTDSGPSRSS 360

Query: 361 SSRPLPQMNTEPRQRRTWSMEVNSGTISW 389
             RPLP  NTEPRQRRTWSMEVNSGT+SW
Sbjct: 361 --RPLPHFNTEPRQRRTWSMEVNSGTMSW 383

[Close]

BLAST of Cp4.1LG01g05030 vs. ExPASy TrEMBL
Match: A0A5A7UA14 (RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold293G00480 PE=4 SV=1)

HSP 1 Score: 651 bits (1679), Expect = 6.25e-234
Identity = 327/389 (84.06%), Postives = 347/389 (89.20%), Query Frame = 0


Query: 1   MSSMAAASSYWCYRCSRFVRASNQESVVCPDCNSGFVEQIDHPLSLRNMETAPRRRFPAS 60
           MSSMAAASSYWCYRCS FVR SNQ+SVVCPDCNSGFVEQI+ P  L N+E APRRRFPA+
Sbjct: 1   MSSMAAASSYWCYRCSHFVRVSNQDSVVCPDCNSGFVEQIEQPSRLVNVEAAPRRRFPAA 60

Query: 61  AMYMIGHRSNSGQNLGSAIRRPRRNGGDRSPFNPVIVLRGPPDGSEGGESRRFELYYDDG 120
           AMYMIG+RSNSGQNLGS +RR RRNGGDRSPFNPVIVLRGP DGSE GESRRFELYYDDG
Sbjct: 61  AMYMIGNRSNSGQNLGSGLRRSRRNGGDRSPFNPVIVLRGPSDGSEAGESRRFELYYDDG 120

Query: 121 TGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNSIGQFETPPASKSAIESMPTIRICEN 180
            GSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMN IG+FE PPASK+AIESMPTI+ICEN
Sbjct: 121 GGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFENPPASKAAIESMPTIQICEN 180

Query: 181 HLETESHCAVCKEAFELGNEAREMPCTHIYHSDCILPWLSIRNSCPVCRHELPSDNPDSL 240
           HL TESHCAVCKEAFELGNEAREMPC HIYH DCILPWLS+RNSCPVCRHELPSDN +SL
Sbjct: 181 HLATESHCAVCKEAFELGNEAREMPCKHIYHCDCILPWLSLRNSCPVCRHELPSDNQNSL 240

Query: 241 DAAEIGVNGGSITSNVDENGGLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDGAFT 300
           DAAE G NGGS+TSN +EN GLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDG FT
Sbjct: 241 DAAESGENGGSVTSNGEENVGLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDGGFT 300

Query: 301 NGGVPRRVSIGSRRGRGREGGGWRRFVRNMFGCFRQQQPMRSSAAYTSSSSPDSGPSRSS 360
           NGG+PRRVS  SR GRGRE GGW R +RNMF CF     MRS A+ TS+S+ DSGPSRSS
Sbjct: 301 NGGLPRRVSFASR-GRGRERGGWGRMIRNMFACFGGS--MRSIAS-TSNSTSDSGPSRSS 360

Query: 361 SSRPLPQMNTEPRQRRTWSMEVNSGTISW 389
             RPLP  N+EPR+RRTWSMEVNSGTISW
Sbjct: 361 --RPLPHFNSEPRRRRTWSMEVNSGTISW 383

[Close]

BLAST of Cp4.1LG01g05030 vs. ExPASy TrEMBL
Match: A0A1S3CGL6 (RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103500230 PE=4 SV=1)

HSP 1 Score: 651 bits (1679), Expect = 6.25e-234
Identity = 327/389 (84.06%), Postives = 347/389 (89.20%), Query Frame = 0


Query: 1   MSSMAAASSYWCYRCSRFVRASNQESVVCPDCNSGFVEQIDHPLSLRNMETAPRRRFPAS 60
           MSSMAAASSYWCYRCS FVR SNQ+SVVCPDCNSGFVEQI+ P  L N+E APRRRFPA+
Sbjct: 1   MSSMAAASSYWCYRCSHFVRVSNQDSVVCPDCNSGFVEQIEQPSRLVNVEAAPRRRFPAA 60

Query: 61  AMYMIGHRSNSGQNLGSAIRRPRRNGGDRSPFNPVIVLRGPPDGSEGGESRRFELYYDDG 120
           AMYMIG+RSNSGQNLGS +RR RRNGGDRSPFNPVIVLRGP DGSE GESRRFELYYDDG
Sbjct: 61  AMYMIGNRSNSGQNLGSGLRRSRRNGGDRSPFNPVIVLRGPSDGSEAGESRRFELYYDDG 120

Query: 121 TGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNSIGQFETPPASKSAIESMPTIRICEN 180
            GSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMN IG+FE PPASK+AIESMPTI+ICEN
Sbjct: 121 GGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFENPPASKAAIESMPTIQICEN 180

Query: 181 HLETESHCAVCKEAFELGNEAREMPCTHIYHSDCILPWLSIRNSCPVCRHELPSDNPDSL 240
           HL TESHCAVCKEAFELGNEAREMPC HIYH DCILPWLS+RNSCPVCRHELPSDN +SL
Sbjct: 181 HLATESHCAVCKEAFELGNEAREMPCKHIYHCDCILPWLSLRNSCPVCRHELPSDNQNSL 240

Query: 241 DAAEIGVNGGSITSNVDENGGLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDGAFT 300
           DAAE G NGGS+TSN +EN GLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDG FT
Sbjct: 241 DAAESGENGGSVTSNGEENVGLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDGGFT 300

Query: 301 NGGVPRRVSIGSRRGRGREGGGWRRFVRNMFGCFRQQQPMRSSAAYTSSSSPDSGPSRSS 360
           NGG+PRRVS  SR GRGRE GGW R +RNMF CF     MRS A+ TS+S+ DSGPSRSS
Sbjct: 301 NGGLPRRVSFASR-GRGRERGGWGRMIRNMFACFGGS--MRSIAS-TSNSTSDSGPSRSS 360

Query: 361 SSRPLPQMNTEPRQRRTWSMEVNSGTISW 389
             RPLP  N+EPR+RRTWSMEVNSGTISW
Sbjct: 361 --RPLPHFNSEPRRRRTWSMEVNSGTISW 383

[Close]

BLAST of Cp4.1LG01g05030 vs. TAIR 10
Match: AT2G39720.1 (RING-H2 finger C2A )

HSP 1 Score: 319.7 bits (818), Expect = 3.2e-87
Identity = 197/405 (48.64%), Postives = 246/405 (60.74%), Query Frame = 0


Query: 6   AASSYWCYRCSRFVRASNQESVVCPDCNSGFVEQIDHPLSLRNMET----------APRR 65
           A+ SYWCY CSRFV  S  +S+ CPDC+ GF+E I  PL     ++          +P R
Sbjct: 2   ASGSYWCYSCSRFVWVS--DSISCPDCDGGFLELIQEPLDFTPSDSFTTTTTTQHRSPTR 61

Query: 66  RFPASAMYMIGHRSNSGQN--LGSAIRRPRRNGGDRSPFNPVIVLRGPPDG------SEG 125
             P S+       S    N    + + R R N   RSP NPVIVLRG          SEG
Sbjct: 62  FPPPSSSSSTPSASMHADNSPTPTIVTRTRSN---RSP-NPVIVLRGSAAAPSSDVVSEG 121

Query: 126 GESRRFELYYDDGTGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMN---SIGQFETPPA 185
            +   F++YYDDGT SGLRPLPPSM+EFLLGSGFDRLL+Q+SQIE+N   ++   E PPA
Sbjct: 122 LDRSAFQMYYDDGTDSGLRPLPPSMTEFLLGSGFDRLLDQISQIELNTNRNLRSCEHPPA 181

Query: 186 SKSAIESMPTIRICENHL--ETESHCAVCKEAFELGNEAREMPCTHIYHSDCILPWLSIR 245
           SKSAIE++P I I   HL  +++SHCAVCKE F L + AREMPC HIYH DCILPWL+IR
Sbjct: 182 SKSAIEALPLIEIDPTHLLSDSQSHCAVCKENFVLKSSAREMPCNHIYHPDCILPWLAIR 241

Query: 246 NSCPVCRHELPSDNPDSLDAAEIGVNGGSITSNVDENGGLTIWRLPGGGFAVGRFHGGRR 305
           NSCPVCRHELP+++      A +     +     D   GLTIWRLPGGGFAVGR  GG R
Sbjct: 242 NSCPVCRHELPAEDLTDGTGAALTAVTATAEEEEDSAAGLTIWRLPGGGFAVGRIPGGWR 301

Query: 306 GGERELPVVYTEVDGA-FTNGGVPRRVSIGSRRGRGREGGGWRR-------FVRNMFGCF 365
           GG+R +PVVYTEVDG    +  +PRRV+ GSRRG GR+GGG R         +  +FGCF
Sbjct: 302 GGDRMMPVVYTEVDGGRLGDERLPRRVAWGSRRG-GRDGGGSRERGGGFAGRIMRLFGCF 361

Query: 366 R-QQQPMRSSAAYTSSSSPDSGPSRSSSSRPLPQMNTEPRQRRTW 379
                 + ++AA +S S      +R + S  +    +   +RR W
Sbjct: 362 SGSSGSIAAAAAASSGSGSRIRVTRRTRSFSMFSTASSSSRRRNW 399

[Close]

BLAST of Cp4.1LG01g05030 vs. TAIR 10
Match: AT3G46620.1 (zinc finger (C3HC4-type RING finger) family protein )

HSP 1 Score: 292.0 bits (746), Expect = 7.2e-79
Identity = 179/367 (48.77%), Postives = 214/367 (58.31%), Query Frame = 0


Query: 8   SSYWCYRCSRFVRASNQE----SVVCPDCNSGFVEQIDHPLSLRNMETAPRRRFPASAMY 67
           +SYWCY C+RF+     +     V+CP CN GF+E+I+   S  +   A     P     
Sbjct: 29  TSYWCYSCTRFISVWEDQDANAGVLCPYCNGGFIEEIED--SSNSTVAAIPASTPEVRSV 88

Query: 68  MIGHRSNSGQNLGSAIRRPRRNGGDRSPFNPVIVLRGPPDGSEG------------GESR 127
              HR        S IRR R N   R+ FNPVIVL G   G  G             E R
Sbjct: 89  EETHR--------SIIRRRRSN--RRTSFNPVIVLHGGGGGGAGERVENEEGDGATRERR 148

Query: 128 RFELYYDDGTGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEM--NSIGQFETPPASKSAI 187
            +E YYDDG+GSGLRPLP S+SE L+GSGF+RLLEQLSQIE   N IG+   PPASKSAI
Sbjct: 149 AYEFYYDDGSGSGLRPLPDSVSEILMGSGFERLLEQLSQIEASGNGIGRSGNPPASKSAI 208

Query: 188 ESMPTIRICENHLETESHCAVCKEAFELGNEAREMPCTHIYHSDCILPWLSIRNSCPVCR 247
           ES+P + I + H + E++CAVC E FE G E REMPC HI+H DCI+PWLSIRNSCPVCR
Sbjct: 209 ESLPRVEISDCHTKAEANCAVCTEVFEAGIEGREMPCKHIFHGDCIVPWLSIRNSCPVCR 268

Query: 248 HELPSDNPDSLDAAEIGVNGGSITSNVDENG-GLTIWRLPGGGFAVGRFHGGRRGGEREL 307
            ELPSD                  SN +E+  G+TIWRLPGGGFAVGRF+ G R GER L
Sbjct: 269 FELPSDPIQ--------------RSNEEEHAVGMTIWRLPGGGFAVGRFNAGVREGERIL 328

Query: 308 PVVYTEVDGA--FTNGGVPRRVS---------IGSRRGRGREGGGWRRFVRNMFGCFRQQ 345
           PVV TE+DG    +N G PRR+S         +    GR   GG  RR VR M    R+ 
Sbjct: 329 PVVLTEMDGGGLGSNEG-PRRISWVRAHETPEMSRNGGRSGNGGRLRRAVRGMVSFMRRV 368

[Close]

BLAST of Cp4.1LG01g05030 vs. TAIR 10
Match: AT5G59550.1 (zinc finger (C3HC4-type RING finger) family protein )

HSP 1 Score: 291.2 bits (744), Expect = 1.2e-78
Identity = 194/418 (46.41%), Postives = 239/418 (57.18%), Query Frame = 0


Query: 8   SSYWCYRCSRFVR------ASNQESVVCPDCNSGFVEQIDHPLSLRNMETAPRRRFPASA 67
           +SYWCY C+RFV        +   SV CP C+ GF+EQI+   S      A     PAS 
Sbjct: 16  ASYWCYSCTRFVSVWADQGTTTVGSVACPHCDGGFIEQINDSSS-----AATELTIPAST 75

Query: 68  MYMIGHRSNSGQNLGSAIRRPRRNGGDRSPFNPVIVLRGPPDGSEGGES-------RRFE 127
                   +   N  S IR  RR  G R  FNPVIVL+G     E GE        R FE
Sbjct: 76  -----EVRSINNNRRSVIR--RRRSGRRPSFNPVIVLQGGAGEREEGEEGDAARDRRAFE 135

Query: 128 LYYDDGTGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNS--IGQFETPPASKSAIESM 187
            YYDDG+GSGLRPLP S+SE L+GSGF+RLLEQLSQIE ++  IG+   PPASKSAIES+
Sbjct: 136 FYYDDGSGSGLRPLPDSVSEILMGSGFERLLEQLSQIEASATGIGRSGNPPASKSAIESL 195

Query: 188 PTIRICENHLETESHCAVCKEAFELGNEAREMPCTHIYHSDCILPWLSIRNSCPVCRHEL 247
           P + I + H+ +E++CAVC E FE   EAREMPC H++H DCI+PWLSIRNSCPVCR EL
Sbjct: 196 PRVEISDCHIGSEANCAVCTEIFETETEAREMPCKHLFHDDCIVPWLSIRNSCPVCRFEL 255

Query: 248 PSDNPDSLDAAEIGVNGGSITSNVDENGGLTIWRLPGGGFAVGRFHGGRRGGERELPVVY 307
           PS+            N  S  +  D   G+TIWRLPGGGFAVGRF+   R GER LPVV 
Sbjct: 256 PSE-----------PNRRSNNNEEDNAVGMTIWRLPGGGFAVGRFNAAMRDGERVLPVVL 315

Query: 308 TEVDGAFTNGGV------PRRV------------SIGSRRGRGREGGGWRRFVRNMFGCF 367
           TE+DG    GG+      PRR+            S G+  G G  GG  RR VR M    
Sbjct: 316 TEMDG----GGIGNSQDGPRRISWVRSHGTLESDSNGTGSGSG-SGGRLRRMVRGMVSLM 375

Query: 368 RQQQPMR---SSAAYTSSSSPDSGPSRSSSSRPLPQMNTEPRQ--RRTWSMEVNSGTI 388
           R+ +P R   SS+A  S+SS +   +    SR L + N+  R+  RR  S   +S ++
Sbjct: 376 RRVRPNRSSSSSSAAISTSSDNLDLNIEVESRVLDRSNSVMRRYFRRNRSNRDSSSSV 405

[Close]

BLAST of Cp4.1LG01g05030 vs. TAIR 10
Match: AT3G19950.1 (RING/U-box superfamily protein )

HSP 1 Score: 143.7 bits (361), Expect = 3.2e-34
Identity = 79/250 (31.60%), Postives = 137/250 (54.80%), Query Frame = 0


Query: 10  YWCYRCSRFVRASNQESV--VCPDCNSGFVEQIDHPLSLRNMETAPRRR---FPAS---- 69
           ++CY+C++ V  S   S    CP CN GF+E+ + P   +++   P      FP +    
Sbjct: 21  FFCYQCNQTVTISISSSADPFCPICNQGFLEEYEDPNPNQSLNFNPNSSDSFFPMADPFS 80

Query: 70  ----AMYMIGHRSNSGQNLGSAI---RRPRRNGGDRSP----FNPVIVLRGPPDGSEGGE 129
                ++     + SG +  S      +P+     ++P    F+P   L+     +    
Sbjct: 81  TLLPLIFGSSAAAPSGMDFMSLFGPSMQPQARSTQQNPQSDAFDPFTFLQNHLQ-TLRSS 140

Query: 130 SRRFELYYDDGTGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNSIGQFETPPASKSAI 189
              FE   ++        +P +  ++  G G ++L++QL++ + N  G   TPPASKSAI
Sbjct: 141 GTHFEFVIENHPSDPGNRMPGNFGDYFFGPGLEQLIQQLAENDPNRYG---TPPASKSAI 200

Query: 190 ESMPTIRICENHLETE-SHCAVCKEAFELGNEAREMPCTHIYHSDCILPWLSIRNSCPVC 239
           +++PT+++ ++ L++E + CAVC + FE G++ ++MPC H++H DC+LPWL + NSCPVC
Sbjct: 201 DALPTVKVTKDMLKSEMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELHNSCPVC 260

[Close]

BLAST of Cp4.1LG01g05030 vs. TAIR 10
Match: AT2G40830.2 (RING-H2 finger C1A )

HSP 1 Score: 141.7 bits (356), Expect = 1.2e-33
Identity = 96/277 (34.66%), Postives = 142/277 (51.26%), Query Frame = 0


Query: 5   AAASSYWCYRCSRFVRASNQESVVCPDCNSGFVEQID----HPLSLRNMETAPRRR---- 64
           ++ +++WC+RC R VR   QE  VC  C  GFVE++D     P  +         R    
Sbjct: 3   SSRNTHWCHRCQRAVRLHGQEP-VCFYCGGGFVEELDMAQASPFDMFRSHRGVVERDQTF 62

Query: 65  --FPASAMYM---IGHRSNSGQNLGSAIRRPRRNGGDRSP-FNPVIVLRGPPDGSEGGES 124
               A +++M   +  RS+  +  G  I     +G +  P   P+++  G       G++
Sbjct: 63  DLMDAFSVFMRNRLAERSHDREIRGRTI----SSGPENFPGLAPLLIFGGQVPYRLTGDN 122

Query: 125 RRFELYYDDGTGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNSIGQFETPPASKSAIE 184
               L+  +G   G+     +  ++  G G + L EQLS        +   PPA +SAI+
Sbjct: 123 AVEALF--NGGSPGIGITRGNTGDYFFGPGLEELFEQLSA----GTTRRGPPPAPRSAID 182

Query: 185 SMPTIRICENHL-ETESHCAVCKEAFELGNEAREMPCTHIYHSDCILPWLSIRNSCPVCR 244
           ++PTI+I + HL  ++S+C VCK+ FELG+EA++MPC HIYHSDCI+PWL   NSCPVCR
Sbjct: 183 ALPTIKIAQRHLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCR 242

Query: 245 HELPS-DNPDS-----LDAAEIGVNGGSITSNVDENG 261
            ELPS   P S             +  S +SN  ENG
Sbjct: 243 QELPSASGPSSSQNRTTPTRNYRSSSSSSSSNSRENG 268

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g05030 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22283	4.6e-86	48.64	Probable E3 ubiquitin-protein ligase RHC2A OS=Arabidopsis thaliana OX=3702 GN=RH...	[more]
Q9SNB6	1.0e-77	48.77	E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis thaliana OX=3702 GN=RDUF1 PE=1 ...	[more]
Q940T5	1.7e-77	46.41	E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana OX=3702 GN=DURF2 PE=1 ...	[more]
P0CH30	1.9e-36	32.73	E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV...	[more]
Q8LPN7	4.5e-33	31.60	E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19...	[more]

BLAST of Cp4.1LG01g05030 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023514100.1	1.92e-289	100.00	probable E3 ubiquitin-protein ligase RHC2A [Cucurbita pepo subsp. pepo]	[more]
KAG6600041.1	1.34e-282	98.46	putative E3 ubiquitin-protein ligase RHC2A, partial [Cucurbita argyrosperma subs...	[more]
XP_022941698.1	1.05e-279	97.69	probable E3 ubiquitin-protein ligase RHC2A [Cucurbita moschata]	[more]
XP_022995937.1	1.18e-276	96.40	probable E3 ubiquitin-protein ligase RHC2A [Cucurbita maxima]	[more]
XP_022138905.1	9.97e-238	85.60	probable E3 ubiquitin-protein ligase RHC2A [Momordica charantia]	[more]

BLAST of Cp4.1LG01g05030 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FSU7	5.10e-280	97.69	RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111446981...	[more]
A0A6J1K0D0	5.70e-277	96.40	RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111491304 P...	[more]
A0A6J1CAT7	4.83e-238	85.60	RING-type E3 ubiquitin transferase OS=Momordica charantia OX=3673 GN=LOC11100997...	[more]
A0A5A7UA14	6.25e-234	84.06	RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3CGL6	6.25e-234	84.06	RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103500230 PE=4 ...	[more]

BLAST of Cp4.1LG01g05030 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G39720.1	3.2e-87	48.64	RING-H2 finger C2A	[more]
AT3G46620.1	7.2e-79	48.77	zinc finger (C3HC4-type RING finger) family protein	[more]
AT5G59550.1	1.2e-78	46.41	zinc finger (C3HC4-type RING finger) family protein	[more]
AT3G19950.1	3.2e-34	31.60	RING/U-box superfamily protein	[more]
AT2G40830.2	1.2e-33	34.66	RING-H2 finger C1A	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 188..228 e-value: 5.2E-7 score: 39.3
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 187..229 e-value: 2.2E-10 score: 40.7
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 188..229 score: 12.017182
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 151..235 e-value: 2.8E-20 score: 73.8
IPR010543	Domain of unknown function DUF1117	PFAM	PF06547	DUF1117	coord: 261..358 e-value: 3.0E-34 score: 118.0
IPR039525	E3 ubiquitin-protein ligase RNF126-like, zinc-ribbon	PFAM	PF14369	zinc_ribbon_9	coord: 9..40 e-value: 7.2E-14 score: 51.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 338..389
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 72..109
None	No IPR available	PANTHER	PTHR15710	E3 UBIQUITIN-PROTEIN LIGASE PRAJA	coord: 6..331
None	No IPR available	PANTHER	PTHR15710:SF112	E3 UBIQUITIN-PROTEIN LIGASE RING1-LIKE PROTEIN	coord: 6..331
None	No IPR available	CDD	cd16667	RING-H2_RNF126_like	coord: 188..229 e-value: 2.08152E-23 score: 89.6844
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 168..235

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g05030.1	Cp4.1LG01g05030.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0061630	ubiquitin protein ligase activity