Cp4.1LG01g04700 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG01g04700
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Plant protein 1589 of unknown function
Location	Cp4.1LG01: 1153872 .. 1154640 (+)
RNA-Seq Expression	Cp4.1LG01g04700
Synteny	Cp4.1LG01g04700

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTTTCTATTTATACACTAATTTTCTTAAAACAATTGATCCCATAAGCTCTTCACAACAAATATAATGGCTGATTCTTCTGCTGCTTACATTCATATGGTAAGTTGGTAACCCTTTCCTTTCATATTTTTCTTGTAAAATCTCATCCGTCCGTTCCGATCGATCGATAATGTGTAAAAAACGTTCCTCTCGCTTATGATAGGTGCAACGCTTGATTGAAATGTGTTTGATCTTCCGTATGAATAAAGAAGAGTGCATGGAAGCTGTTTCTAAACACGCCAATATCAACCCCGTAATCACCTCTACTGGTACTGGTTCGTTGACGTTTTTAATTAATCCGCTCTTCTTCCACTGTGATTCGCCTCATCGGTTTCTCTTTTCTTTTAGTGTGGAAGGAATTAGAGAAAGAAAATAGAGAGTTCTTTGAAGCTTATTCGGAGTCTCGAACCATAGACGATAGAATATTAGTTGAAGAAGAGACAAGACGGTTGATCCAAAGGATGATGTCCAAACAAGATACCGATGACTAGCAATTTCTATATGCATGCATGCACGGATTACCTAGATGGCATAAGTAGACTTACATTGTTCATATCCAATTGAAATATGCCACGTGGCCCTCTGGTAAAAAAATAAGGGCTGTTATGTAGTTACTCATGATATATATTTACCATGAATTATTTTTTATTTTCTTGGGTAAATTTTGCAAGGTAACTGAGATGGTGACATAAGACTCTTCTTCTATCGTCCATCGTTGACTGAAAATACAA

mRNA sequence

CTTTTCTATTTATACACTAATTTTCTTAAAACAATTGATCCCATAAGCTCTTCACAACAAATATAATGGCTGATTCTTCTGCTGCTTACATTCATATGGTGCAACGCTTGATTGAAATGTGTTTGATCTTCCGTATGAATAAAGAAGAGTGCATGGAAGCTGTTTCTAAACACGCCAATATCAACCCCGTAATCACCTCTACTGGTACTGTGTGGAAGGAATTAGAGAAAGAAAATAGAGAGTTCTTTGAAGCTTATTCGGAGTCTCGAACCATAGACGATAGAATATTAGTTGAAGAAGAGACAAGACGGTTGATCCAAAGGATGATGTCCAAACAAGATACCGATGACTAGCAATTTCTATATGCATGCATGCACGGATTACCTAGATGGCATAAGTAGACTTACATTGTTCATATCCAATTGAAATATGCCACGTGGCCCTCTGGTAAAAAAATAAGGGCTGTTATGTAGTTACTCATGATATATATTTACCATGAATTATTTTTTATTTTCTTGGGTAAATTTTGCAAGGTAACTGAGATGGTGACATAAGACTCTTCTTCTATCGTCCATCGTTGACTGAAAATACAA

Coding sequence (CDS)

ATGGCTGATTCTTCTGCTGCTTACATTCATATGGTGCAACGCTTGATTGAAATGTGTTTGATCTTCCGTATGAATAAAGAAGAGTGCATGGAAGCTGTTTCTAAACACGCCAATATCAACCCCGTAATCACCTCTACTGGTACTGTGTGGAAGGAATTAGAGAAAGAAAATAGAGAGTTCTTTGAAGCTTATTCGGAGTCTCGAACCATAGACGATAGAATATTAGTTGAAGAAGAGACAAGACGGTTGATCCAAAGGATGATGTCCAAACAAGATACCGATGACTAG

Protein sequence

MADSSAAYIHMVQRLIEMCLIFRMNKEECMEAVSKHANINPVITSTGTVWKELEKENREFFEAYSESRTIDDRILVEEETRRLIQRMMSKQDTDD

Homology

[Close]

BLAST of Cp4.1LG01g04700 vs. NCBI nr
Match: KAG6600072.1 (hypothetical protein SDJN03_05305, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 180 bits (457), Expect = 6.04e-57
Identity = 92/94 (97.87%), Postives = 93/94 (98.94%), Query Frame = 0


Query: 1  MADSSAAYIHMVQRLIEMCLIFRMNKEECMEAVSKHANINPVITSTGTVWKELEKENREF 60
          MADSSAAYIHMVQRLIEMCLIFRMNKEECMEAVSKHANINPVITSTGTVWKELEKENREF
Sbjct: 1  MADSSAAYIHMVQRLIEMCLIFRMNKEECMEAVSKHANINPVITSTGTVWKELEKENREF 60

Query: 61 FEAYSESRTIDDRILVEEETRRLIQRMMSKQDTD 94
          FEAYSESRTIDDRIL EEET+RLIQRMMSKQDTD
Sbjct: 61 FEAYSESRTIDDRILAEEETKRLIQRMMSKQDTD 94

[Close]

BLAST of Cp4.1LG01g04700 vs. NCBI nr
Match: XP_023547240.1 (uncharacterized protein LOC111806113 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 176 bits (445), Expect = 3.85e-55
Identity = 93/95 (97.89%), Postives = 93/95 (97.89%), Query Frame = 0


Query: 1  MADSSAAYIHMVQRLIEMCLIFRMNKEECMEAVSKHANINPVITSTGTVWKELEKENREF 60
          MADSSAAYIHMVQRLIEMCLIFRMNKEECMEAVSKHANINPVITST  VWKELEKENREF
Sbjct: 1  MADSSAAYIHMVQRLIEMCLIFRMNKEECMEAVSKHANINPVITST--VWKELEKENREF 60

Query: 61 FEAYSESRTIDDRILVEEETRRLIQRMMSKQDTDD 95
          FEAYSESRTIDDRILVEEETRRLIQRMMSKQDTDD
Sbjct: 61 FEAYSESRTIDDRILVEEETRRLIQRMMSKQDTDD 93

[Close]

BLAST of Cp4.1LG01g04700 vs. NCBI nr
Match: XP_022943203.1 (uncharacterized protein LOC111448003 [Cucurbita moschata])

HSP 1 Score: 172 bits (436), Expect = 9.09e-54
Identity = 91/94 (96.81%), Postives = 91/94 (96.81%), Query Frame = 0


Query: 1  MADSSAAYIHMVQRLIEMCLIFRMNKEECMEAVSKHANINPVITSTGTVWKELEKENREF 60
          MADSSAAYIHMVQRLIEMCLIFRMNKEECMEAVSKHANINPVITST  VWKELEKENREF
Sbjct: 1  MADSSAAYIHMVQRLIEMCLIFRMNKEECMEAVSKHANINPVITST--VWKELEKENREF 60

Query: 61 FEAYSESRTIDDRILVEEETRRLIQRMMSKQDTD 94
          FEAYSESRTIDDRIL EEETRRLIQRMMSKQDTD
Sbjct: 61 FEAYSESRTIDDRILAEEETRRLIQRMMSKQDTD 92

[Close]

BLAST of Cp4.1LG01g04700 vs. NCBI nr
Match: XP_022986049.1 (uncharacterized protein LOC111483901 [Cucurbita maxima])

HSP 1 Score: 171 bits (432), Expect = 3.70e-53
Identity = 90/95 (94.74%), Postives = 91/95 (95.79%), Query Frame = 0


Query: 1  MADSSAAYIHMVQRLIEMCLIFRMNKEECMEAVSKHANINPVITSTGTVWKELEKENREF 60
          MADS AAYIHMVQRLIEMCLIFRMNKEECMEAVSKHANINPVITST  VWKELEKENREF
Sbjct: 1  MADSPAAYIHMVQRLIEMCLIFRMNKEECMEAVSKHANINPVITST--VWKELEKENREF 60

Query: 61 FEAYSESRTIDDRILVEEETRRLIQRMMSKQDTDD 95
          FEAYSESRTIDDRIL EEETRRLIQR+MSKQDTDD
Sbjct: 61 FEAYSESRTIDDRILAEEETRRLIQRIMSKQDTDD 93

[Close]

BLAST of Cp4.1LG01g04700 vs. NCBI nr
Match: XP_022139201.1 (uncharacterized protein LOC111010170 [Momordica charantia])

HSP 1 Score: 144 bits (362), Expect = 1.71e-42
Identity = 76/95 (80.00%), Postives = 85/95 (89.47%), Query Frame = 0


Query: 1  MADSSAAYIHMVQRLIEMCLIFRMNKEECMEAVSKHANINPVITSTGTVWKELEKENREF 60
          MADSSAAYIHMVQ LIE CLIF MNK+ECMEA+SKHANI+P+ITST  VWKELEKENREF
Sbjct: 1  MADSSAAYIHMVQHLIEKCLIFHMNKDECMEALSKHANISPIITST--VWKELEKENREF 60

Query: 61 FEAYSESRTIDDRILVEEETRRLIQRMMSKQDTDD 95
          FEAY ESR  +DRIL EEETR+LI+RM+SK D+DD
Sbjct: 61 FEAYXESRNKNDRILAEEETRQLIZRMISK-DSDD 92

[Close]

BLAST of Cp4.1LG01g04700 vs. ExPASy TrEMBL
Match: A0A6J1FWJ0 (uncharacterized protein LOC111448003 OS=Cucurbita moschata OX=3662 GN=LOC111448003 PE=4 SV=1)

HSP 1 Score: 172 bits (436), Expect = 4.40e-54
Identity = 91/94 (96.81%), Postives = 91/94 (96.81%), Query Frame = 0


Query: 1  MADSSAAYIHMVQRLIEMCLIFRMNKEECMEAVSKHANINPVITSTGTVWKELEKENREF 60
          MADSSAAYIHMVQRLIEMCLIFRMNKEECMEAVSKHANINPVITST  VWKELEKENREF
Sbjct: 1  MADSSAAYIHMVQRLIEMCLIFRMNKEECMEAVSKHANINPVITST--VWKELEKENREF 60

Query: 61 FEAYSESRTIDDRILVEEETRRLIQRMMSKQDTD 94
          FEAYSESRTIDDRIL EEETRRLIQRMMSKQDTD
Sbjct: 61 FEAYSESRTIDDRILAEEETRRLIQRMMSKQDTD 92

[Close]

BLAST of Cp4.1LG01g04700 vs. ExPASy TrEMBL
Match: A0A6J1JF00 (uncharacterized protein LOC111483901 OS=Cucurbita maxima OX=3661 GN=LOC111483901 PE=4 SV=1)

HSP 1 Score: 171 bits (432), Expect = 1.79e-53
Identity = 90/95 (94.74%), Postives = 91/95 (95.79%), Query Frame = 0


Query: 1  MADSSAAYIHMVQRLIEMCLIFRMNKEECMEAVSKHANINPVITSTGTVWKELEKENREF 60
          MADS AAYIHMVQRLIEMCLIFRMNKEECMEAVSKHANINPVITST  VWKELEKENREF
Sbjct: 1  MADSPAAYIHMVQRLIEMCLIFRMNKEECMEAVSKHANINPVITST--VWKELEKENREF 60

Query: 61 FEAYSESRTIDDRILVEEETRRLIQRMMSKQDTDD 95
          FEAYSESRTIDDRIL EEETRRLIQR+MSKQDTDD
Sbjct: 61 FEAYSESRTIDDRILAEEETRRLIQRIMSKQDTDD 93

[Close]

BLAST of Cp4.1LG01g04700 vs. ExPASy TrEMBL
Match: A0A6J1CBZ2 (uncharacterized protein LOC111010170 OS=Momordica charantia OX=3673 GN=LOC111010170 PE=4 SV=1)

HSP 1 Score: 143 bits (360), Expect = 1.67e-42
Identity = 76/95 (80.00%), Postives = 85/95 (89.47%), Query Frame = 0


Query: 1  MADSSAAYIHMVQRLIEMCLIFRMNKEECMEAVSKHANINPVITSTGTVWKELEKENREF 60
          MADSSAAYIHMVQ LIE CLIF MNK+ECMEA+SKHANI+P+ITST  VWKELEKENREF
Sbjct: 1  MADSSAAYIHMVQHLIEKCLIFHMNKDECMEALSKHANISPIITST--VWKELEKENREF 60

Query: 61 FEAYSESRTIDDRILVEEETRRLIQRMMSKQDTDD 95
          FEAY ESR  +DRIL EEETR+LI+RM+SK D+DD
Sbjct: 61 FEAYXESRNKNDRILAEEETRQLIERMISK-DSDD 92

[Close]

BLAST of Cp4.1LG01g04700 vs. ExPASy TrEMBL
Match: A0A0A0KQ71 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G179770 PE=4 SV=1)

HSP 1 Score: 142 bits (357), Expect = 4.78e-42
Identity = 74/94 (78.72%), Postives = 82/94 (87.23%), Query Frame = 0


Query: 1  MADSSAAYIHMVQRLIEMCLIFRMNKEECMEAVSKHANINPVITSTGTVWKELEKENREF 60
          MADSSAAYIHMVQ LIE CLIF MNK+EC+EA+SKHANI+P+ITST  VWKELEKENREF
Sbjct: 1  MADSSAAYIHMVQHLIEKCLIFHMNKDECIEALSKHANISPIITST--VWKELEKENREF 60

Query: 61 FEAYSESRTIDDRILVEEETRRLIQRMMSKQDTD 94
          FEAYSE +  +DRIL EEETR+LIQRMMSK   D
Sbjct: 61 FEAYSECKGRNDRILAEEETRKLIQRMMSKHSDD 92

[Close]

BLAST of Cp4.1LG01g04700 vs. ExPASy TrEMBL
Match: A0A5A7V1X1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold321G00180 PE=4 SV=1)

HSP 1 Score: 139 bits (351), Expect = 4.05e-41
Identity = 73/95 (76.84%), Postives = 83/95 (87.37%), Query Frame = 0


Query: 1  MADSSAAYIHMVQRLIEMCLIFRMNKEECMEAVSKHANINPVITSTGTVWKELEKENREF 60
          MADSSAAYIHMVQ LIE CLIF MNK+EC+EA+SKHANI+PVITST  VWKELEKENREF
Sbjct: 1  MADSSAAYIHMVQHLIEKCLIFHMNKDECIEALSKHANISPVITST--VWKELEKENREF 60

Query: 61 FEAYSESRTIDDRILVEEETRRLIQRMMSKQDTDD 95
          FEAYSE +  +DRIL EEETR+LIQRMM  + +D+
Sbjct: 61 FEAYSECKGRNDRILAEEETRKLIQRMMMSKHSDE 93

[Close]

BLAST of Cp4.1LG01g04700 vs. TAIR 10
Match: AT3G55240.1 (Plant protein 1589 of unknown function )

HSP 1 Score: 112.1 bits (279), Expect = 2.5e-25
Identity = 61/98 (62.24%), Postives = 81/98 (82.65%), Query Frame = 0


Query: 1  MAD-SSAAYIHMVQRLIEMCLIFRMNKEECMEAVSKHANINPVITSTGTVWKELEKENRE 60
          MAD SSA+YIHMVQ +IE CLIF M+KEEC+EA+SKHANI PVITS  TVWKELEKEN+E
Sbjct: 1  MADSSSASYIHMVQHMIEKCLIFHMSKEECVEALSKHANITPVITS--TVWKELEKENKE 60

Query: 61 FFEAYSESRTIDDRILVEEETRRLIQRMM--SKQDTDD 96
          FF+AY E ++  ++ + EEET ++IQ+++  S +++DD
Sbjct: 61 FFKAYEERQSKQEQ-MSEEETNQMIQKIISDSSKESDD 95

[Close]

BLAST of Cp4.1LG01g04700 vs. TAIR 10
Match: AT3G28990.1 (Plant protein 1589 of unknown function )

HSP 1 Score: 99.8 bits (247), Expect = 1.3e-21
Identity = 51/86 (59.30%), Postives = 66/86 (76.74%), Query Frame = 0


Query: 4  SSAAYIHMVQRLIEMCLIFRMNKEECMEAVSKHANINPVITSTGTVWKELEKENREFFEA 63
          S A YIH+VQ +IE CL F M+KEECMEA+S++ANINP+ITS  TVWKEL KEN++FFE 
Sbjct: 5  SPAVYIHLVQHMIETCLTFNMSKEECMEALSENANINPIITS--TVWKELVKENKDFFET 64

Query: 64 YSESRTIDDRILVEEETRRLIQRMMS 90
          Y E + +    + EEET +LIQ ++S
Sbjct: 65 Y-EQKLMKKESMSEEETNQLIQNIIS 87

[Close]

BLAST of Cp4.1LG01g04700 vs. TAIR 10
Match: AT5G02580.1 (Plant protein 1589 of unknown function )

HSP 1 Score: 98.2 bits (243), Expect = 3.7e-21
Identity = 50/87 (57.47%), Postives = 64/87 (73.56%), Query Frame = 0


Query: 4  SSAAYIHMVQRLIEMCLIFRMNKEECMEAVSKHANINPVITSTGTVWKELEKENREFFEA 63
          S A+YIH+V  LIE C++F M KEECM+A+ KHANI P+ITS  TVWKEL KEN+EFFEA
Sbjct: 7  SQASYIHLVHHLIEECIVFNMGKEECMDALFKHANIKPIITS--TVWKELAKENKEFFEA 66

Query: 64 YSESRTIDDRILVEEETRRLIQRMMSK 91
          Y   R   + I  E+ET R I+ ++S+
Sbjct: 67 YERRR---EEIPTEKETARRIRDLLSR 88

[Close]

BLAST of Cp4.1LG01g04700 vs. TAIR 10
Match: AT5G02580.2 (Plant protein 1589 of unknown function )

HSP 1 Score: 70.1 bits (170), Expect = 1.1e-12
Identity = 30/45 (66.67%), Postives = 37/45 (82.22%), Query Frame = 0


Query: 4  SSAAYIHMVQRLIEMCLIFRMNKEECMEAVSKHANINPVITSTGT 49
          S A+YIH+V  LIE C++F M KEECM+A+ KHANI P+ITSTGT
Sbjct: 7  SQASYIHLVHHLIEECIVFNMGKEECMDALFKHANIKPIITSTGT 51

[Close]

BLAST of Cp4.1LG01g04700 vs. TAIR 10
Match: AT1G10657.2 (Plant protein 1589 of unknown function )

HSP 1 Score: 67.4 bits (163), Expect = 7.1e-12
Identity = 28/58 (48.28%), Postives = 45/58 (77.59%), Query Frame = 0


Query: 7  AYIHMVQRLIEMCLIFRMNKEECMEAVSKHANINPVITSTGTVWKELEKENREFFEAY 65
          +YI MVQ +IE C++ RM ++EC++A+  HA+I P++T   TVW+ L++EN++FFE Y
Sbjct: 22 SYIRMVQHMIERCILLRMTRDECVKALDHHASILPLVTL--TVWRGLQRENKDFFETY 77

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g04700 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG01g04700 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6600072.1	6.04e-57	97.87	hypothetical protein SDJN03_05305, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023547240.1	3.85e-55	97.89	uncharacterized protein LOC111806113 [Cucurbita pepo subsp. pepo]	[more]
XP_022943203.1	9.09e-54	96.81	uncharacterized protein LOC111448003 [Cucurbita moschata]	[more]
XP_022986049.1	3.70e-53	94.74	uncharacterized protein LOC111483901 [Cucurbita maxima]	[more]
XP_022139201.1	1.71e-42	80.00	uncharacterized protein LOC111010170 [Momordica charantia]	[more]

BLAST of Cp4.1LG01g04700 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FWJ0	4.40e-54	96.81	uncharacterized protein LOC111448003 OS=Cucurbita moschata OX=3662 GN=LOC1114480...	[more]
A0A6J1JF00	1.79e-53	94.74	uncharacterized protein LOC111483901 OS=Cucurbita maxima OX=3661 GN=LOC111483901...	[more]
A0A6J1CBZ2	1.67e-42	80.00	uncharacterized protein LOC111010170 OS=Momordica charantia OX=3673 GN=LOC111010...	[more]
A0A0A0KQ71	4.78e-42	78.72	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G179770 PE=4 SV=1	[more]
A0A5A7V1X1	4.05e-41	76.84	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of Cp4.1LG01g04700 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G55240.1	2.5e-25	62.24	Plant protein 1589 of unknown function	[more]
AT3G28990.1	1.3e-21	59.30	Plant protein 1589 of unknown function	[more]
AT5G02580.1	3.7e-21	57.47	Plant protein 1589 of unknown function	[more]
AT5G02580.2	1.1e-12	66.67	Plant protein 1589 of unknown function	[more]
AT1G10657.2	7.1e-12	48.28	Plant protein 1589 of unknown function	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006476	Conserved hypothetical protein CHP01589, plant	PFAM	PF09713	A_thal_3526	coord: 12..65 e-value: 6.2E-23 score: 80.8
IPR006476	Conserved hypothetical protein CHP01589, plant	TIGRFAM	TIGR01589	TIGR01589	coord: 9..65 e-value: 3.7E-21 score: 72.9
IPR006476	Conserved hypothetical protein CHP01589, plant	PANTHER	PTHR31871	OS02G0137100 PROTEIN	coord: 1..90
None	No IPR available	PANTHER	PTHR31871:SF18	ANGIOTENSIN-CONVERTING ENZYME 2-RELATED	coord: 1..90

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g04700.1	Cp4.1LG01g04700.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032502	developmental process