Cp4.1LG01g04320 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG01g04320
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	E3 ubiquitin ligase BIG BROTHER-related-like
Location	Cp4.1LG01: 1406494 .. 1412638 (+)
RNA-Seq Expression	Cp4.1LG01g04320
Synteny	Cp4.1LG01g04320

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AACGAAGCCACCACTAACGCCACCAAACTTGGTTTTGATGGAGTCAAGCCACCGCCCACCACCGCCACCACCGCCTCCTCCGACCTTGAACACAACCCTAATTCCAATTCATCGCCATCGTCTGCAGACCCCCACAATGAGACTACTGGATCCGACTCCACTTCTCGCCAATCCGCTAGAACTCCCTTCACTAACCTCAACCAGGTCGATGCTGACCTTGCCCTCGCACGTACCCTTCAAGAACAGGTTCTCTCTATCCCTCTTTTGATGTCACTGTTCCTACTTTGTTCTTGTTCCTGTTCAATTTGTGGTTTCTTTTCTGTTTCTTGTTGTTCTGTGTTCAATTCGGTCTGTTGTGAGCTGCTTTGGGAACTGTGTGATNCTTCGCTATCGCCTTCCCCAGGAAAGGGTACGTCATATAATCAGGGGAGACCCCATTCCGCAGCATCCTAACGAAAACCGTAATTGAACGATTTGGGTTTCTGGAATTTGAAAAACCCCTTATGAGAGTGTTCCATTTGAAGGTGGTGGGATTGGGAAGATTCAATAACAGTTTATATGAGTAGTCGAGATCGCCGGCGGGGGAGAGTGCAGAGAAGGAGAGAAGTTTCGATACGACGGCGTCATCTTGAGAGACACCGAAAGTGAAAAGCAGAGCATGGATTCTTCTTAATTCGGACATTGATTTGCATTTGTCGAGAAGAGAGATTAGAGAAGATGCATTCATCATCGTTGGAATGCATTCGACACTGCAGCCAACGGATTAAAGTTGAGTTTTTTTTTAAAATAAAATAATATTAAATATTAAATTTAAATAAAATTTATTATTTTAAAAAAAATTAAAATTGAGAATTGCCTTTTGTAATAACTTTTAAAATAATTAGTATGTTTGGTAAATTAATACTAAATTATTGTGATTTATATATAATTATTTTTATATTAATATTTAATTTATAATTTATTTTAAGATAGTTGTTTAAAAAAAATTATATTATTAGATGTAGTTTTGTTTTTGTCAAACTATTTATCGAAAAAAGAAAAAGGAAAAACAAATTCTTATTTTCTATATTTGTTTATTTTGAAATAATAATAAAAATAGAAAAAAGAAAAAAGAAAAAAGAAAAAGGTGCGTCTGTTTGTTTGTTCTTGCTCGGCTCTCAAAAATTATATAATCTTCGTCGTGTTCTTAGATTCTTCTGTTACTATTAATTTTTTTCTTCTCTGAAATCTTTGATTCTCCTTCTCCTAATTCTTCATATCATCTCTTTTCCATCTTCCATTTGTCAAATCCAAATCTCCCTTTTCTCTCAAACCTCAATCTCCTTCTTTTATGGAGAACGAAGCCACCACTAACGCCACCAAACTTGGTTTTGATGGAGTCAAGCCACCGCCCACCACCGCCACCACCGCCTCCTCCGACCTTGAACACAACCCTAATTCCAATTCATCGCCATCGTCTGCAGACCCCCACAATGAGACTACTGGATCCGACTCCACTTCTCGCCAATCCGCTAGAACTCCCTTCACTAACCTCAACCAGGTCGATGCTGACCTTGCCCTCGCACGTACCCTTCAAGAACAGGTTCTCTCTATCCCTCTTTTGATGTCACTGTTCCTACTTTGTTCTTGTTCCTGTTCAATTTGTGGTTTCTTTTCTGTTTCTTGTTGTTCTGTGTTCAATTCGGTCTGTTGTGAGCTGCTTTGGGAACTGTGTGATGGGAAATCCTATCTTTTTTGTTTCCGTTCGATTTTTTAAGGAATTTGGTTGTGTGTGGAATCCATGTTCTGCTTTGTGGATTTGAACTATCCTGCGAGTCTATTTATTGTTTAGATTCTGGATTTTGTTTTCCTTTCTTGATTATCTGATTGTGTTTTATTGTTCTTGATTGCTGTGATTTCTAGCATCGGCTTCATTTGAGTTCATTAGGTTTCTGCTAGTTTGTGTAGGGAACACTTTGGGGAGTTGTTGACAAACACCAATCATACAATGAGCACGCTTTTGTTACTTTCTTTTATCTCTCAATATTGATTGACTAGTTCATTGTGAGCAAACGTACGTTAGTGAATGCAAATTGTTTTCATCTTGATTTGGTAATGATGATTTTCCAGCTTATGGGGGTAAGAGAGAGGGTATTGGAGGCTTAGAATGGTGAATGCAAAGGGTTTCAGTGATGTTTTCAATTGACAATGATTAATTATGAGCAGGAAAGGGCATACCTGAGGCTTAGAATGGTGAGTATGGGGATTGATTTTGGAAGTTGGGAAGGTGGAAGTTATGCATTAGATGACGAGGACGGTTTTGGTGATCTGCACGATCATACAGAATCTGATGGAGATGATGATGATGAGGAGTTTGATGGAACAAATGTCAATGATGACGACGATGTGTTTGATGTGCATGCTCGTGAAGATGGTGGAGAGCATATCAACCCCAGCTTTGAACTTGATCCTGGTAATTTTTTGAGTGACGAGGCTTATGCTAGAGCCTTACAAGATTCTGAAGACAGGGAAATGGCTGCCAGATTGATGGCCCTTGCTGGATTACATGATGGTGAGTTTGCTTGGCCATGTGTCTCTCTATGTAATGCATTATTACTTCTGTGGAGGTCTCTAAACCATGGAGGACTAAAATCTTTTTTATATCTTGTTGCAGAGGAAGCAGATGACACGGACGATCAAGGCGAAAATTCTCAGGTGCATTTATATATATATAGCTACCCTCTTTAAACTCTCAAGTGCTTCATCCTTCTACCTTGGTCATAAGATCCAACCCTTCCTTTACTTGATTATCATTTATATTCCCACAACTCTAGCATACGATTCAACATTATCACGACCCTTTATTTTTCTGGAGAATCTGGTCTTGGATGAATAAAAGGATTTTTAAAAAATCACTCTTCCTTGGATGTTTTTCAGGATCTTATCAGACTACATATATTTTATATATAGCTACTCCTGTTTAATCTCTCAAGTGTTTCATCTTTCTTCTATGATATGCACAAATTGGGATGTTCTTTTATAGCTCACTTGGTCTATGAGGCATTTCTTATCTCTTGTATTTTCTGATTAATGATACTGTTCTTTTCCTAAAAAACTGAAAACTGTACTGTTTGTGTCTATCTTGACCTCTGTTACTCCTTCAGAAAGTGTTTACAAGTCTATGTTTCGTAGGCTGGTTTTCGACATCCAAAAGCCCTTCCAAGAAGGTGTATTTCTAAGTTGTCGGTACTATTAGCAACATGAACTAGAGCTTCAAAAGCAAAGAGAAGTTAAGTTGGTGGGATGTTAGGCAAAATGGCTTGTGCCAAAACTCTCCTGGAGATAGCCACCATTTTTCACATTTGCAGCTTTATGAAAATCTTTTCTAAGAAGCCAAAAAAATCTTGAAGGATGCTTAAGGTACTTTGTGGCCTTTATTTAAGCCATGAGAAAAACACTCAGCCATAGCAGTTACTTCCTTCCTTGACTTGCAATCCTTCCTTGACTTGCTACTACCATTAATCATATCTTTCTAAATTTTTATGAAATTGTCTTTGAAAATGTTTTGACCCTTAATAAAGAACTCATTCAAATAGCCAGCCAATCCAAGAAGATATAGCTGTATTTTGGATTTATTACAGCCATTAAAATATCCTTTTTGTAAGGGCCTATGACAGCCCTAGAAACAGGATTCCTTTGAGATCTCTTGACTAAAGCCTTCTTCATTTGTCGAGGAAAAGAAAATTTCGAAGTTCTTGAATTACTTCCATTTGTTGCCCCATTGGATAAACATAGACAATTAACAGAGAGCACCCTTAATGATAAGGTGTCATCTATGTGTTTTAGAGCTTCCCTTCTGTTTAATCAGCTATCATTCAAACTTCTCTTTACTGTATTATCCAACAACGATGTCTTCTCCCTTGGATCTTCCTTTTAATGGATGTTATAAGTCCATCATTCTGACTTTTAAGGATCTTCTTTATAGTTTTCAACTTCAGCATGAGGGAATGGCCTGTTGAGGGTGGTTTTAGTAGGCTAGTGATTGAAGGTGACTGTTGCCTTGTAGCCCCAGAATTCTGAAATTGCAACATCTTTCCATTATATCGACAAAAATATCTTTTCAATATCTTCGGAACAACTGAATAATTATTCTGTTTCTCGTATTAGACTAGGTGAATTTTTTATTCCGAAAGGCATGTCTACTAGTAAAAGATTTGTATAAGTTAATTGAAGTGAGAATAAAGGGATGGTTCAATTCAATAGTAGCCTGGCTTTAGTATCCTATGAGTTTCTTTGGCAACAAAATGTTATAGGGTCCTTTTGGTGCATTGTCCCAGGAGAATAATCGAAGTGTGCACAAGATCATTGTTTGGTAACGTGGAAGTTACCAACCCCATAACCCAAAATAGCATATAGATCACAAAGGCATTTGATTCTTATAAAGTATATCTACCCATGAAAGAGATTGTGATCTCTACTTCTTTCACTTCTGCTCGTCATGCTTCTCTGCCTTATCTTCCAACTACAACTCCACCTGCTGTGGAAGGTCCATCTGTTTCCTCATAGTTTGTCACAGCCCTCCCTGCGGTGTGGATGAGGCCACTTTTATAACCTTTTCCTTTGCTGTCCAACCATCAAATAGAAAGATCTTCTAATGCAGAAGAAAAAGTCCCAAGAAGGGTCAGTCCAGATGCAAAATTTTTCCAGAACAATCACAAACGCATCAATGATGATCAGGATGAGCGACTTGATGAGAGTTCGTAAGGACCTCACCAGCTTCCTATCTATTAAATGTGATTTGTGATTTGATCTGTTGATGGTTGGATAATCATAGTCATATATGGCTAACTGGGGGGATTGGTGCCTTTGAGAGAACTCATTTTGTTAGTCACACCAAAGGCATGTTCCAAGCTATTGTCTGTGTTGATCAAAATCCTCCTGTCCCTTTTGAATGAAACCTTTTAAACTCTTAATATCAGATGACATATCTGATTTATTGTTCTATCAAAATACTCATCAAGGCTTGGTTTGCAGGATACGTGGGAGGATGTTGACCCAGATGAACTGTCGTACGAGGTGAGTTTGGTCTGATGGAGTGATGCCCATGCGTTATAATAGTTTATTCTTGAGAGGATAATTAATATTTCAGGAGTTGCTCGCATTGGGTGAAGTGGTAGGAACTGAGAGCAGAGGGCTATCTGCTGATACAATTGCTTCCTTACCCTCCATAAACTTCAAGGCAGGGAGCGGTCAGACTGGAAGCAACGATTCGTGAGTGATTTGAAGCAGTTTTGGTTTTCTTTACCATCCATGTCTTGTTTACTTAGCTTTTGGCTCTCATTTCTCAGATGTGTCATTTGTCGGTTGGATTTCGAGGACGATGAAACCCTGACTGTTCTTTCCTGCAAACACTCCTACCATTCGGAGTGCATAAATAATTGGTTAAAAATAAACAAGGTATGCCATTTTTACATGTGCCTTCCTATTAGCAAGGATCATTGTTTTCTTTCTCCTGCAACTTCTGCTCTCCGCCCCCTAAACTGCGATAACGACGATACTTTTGTGCTTGGAATCGATGCGAACAATAACGTACATATGGCTACTACCGAAGCAGCGATATCTAAAGCTTTGCTGCTGCTTTTGTACAGGTCTGCCCTGTTTGCAGTGCTGAAGTGAGTTCTACAGCTGGTGGGAGCAGTTAAGTTAGTTGTAGCATGTGCTATGGAATGTACCAAAATCAACATCTCACGAAGTTAAACGACGAAGGATTTTAATTTTTGTTTTGTTTTTTTTTTGTTTTTTTATAATCATTTTGCATACCCATTTCAGTTCTGAGTATGTGTGGAAAATGTGTCTGGTGGGTCATACAATCTCCGGTTTGATTCTGTAAACCAAGCCAAGATGTCATAGTCATGTGAATCTCTAATTTTTTATTCTCTTGCCTTGGCTTGGCTTCGGTGTTTAAACATAAATTTGGCCGCCGCCGGGGATAGCCAGGTTTTGTTTTCGAGGCCATTAGAAAGAAACTCGCACTTCTTCCAAATTTGATGCTCTTGGGATGTGAATTCTTCTGTACTACTTTTGAGCAACTACTTCCACTCCTCCATGTATATGATATCATATACAACTCACTCCACTTAATACTATTGTTGAAAACTATTTCTAA

mRNA sequence

AACGAAGCCACCACTAACGCCACCAAACTTGGTTTTGATGGAGTCAAGCCACCGCCCACCACCGCCACCACCGCCTCCTCCGACCTTGAACACAACCCTAATTCCAATTCATCGCCATCGTCTGCAGACCCCCACAATGAGACTACTGGATCCGACTCCACTTCTCGCCAATCCGCTAGAACTCCCTTCACTAACCTCAACCAGGTCGATGCTGACCTTGCCCTCGCACGTACCCTTCAAGAACAGAACGAAGCCACCACTAACGCCACCAAACTTGGTTTTGATGGAGTCAAGCCACCGCCCACCACCGCCACCACCGCCTCCTCCGACCTTGAACACAACCCTAATTCCAATTCATCGCCATCGTCTGCAGACCCCCACAATGAGACTACTGGATCCGACTCCACTTCTCGCCAATCCGCTAGAACTCCCTTCACTAACCTCAACCAGGTCGATGCTGACCTTGCCCTCGCACGTACCCTTCAAGAACAGGAAAGGGCATACCTGAGGCTTAGAATGGTGAGTATGGGGATTGATTTTGGAAGTTGGGAAGGTGGAAGTTATGCATTAGATGACGAGGACGGTTTTGGTGATCTGCACGATCATACAGAATCTGATGGAGATGATGATGATGAGGAGTTTGATGGAACAAATGTCAATGATGACGACGATGTGTTTGATGTGCATGCTCGTGAAGATGGTGGAGAGCATATCAACCCCAGCTTTGAACTTGATCCTGGTAATTTTTTGAGTGACGAGGCTTATGCTAGAGCCTTACAAGATTCTGAAGACAGGGAAATGGCTGCCAGATTGATGGCCCTTGCTGGATTACATGATGAGGAAGCAGATGACACGGACGATCAAGGCGAAAATTCTCAGGATACGTGGGAGGATGTTGACCCAGATGAACTGTCGTACGAGGAGTTGCTCGCATTGGGTGAAGTGGTAGGAACTGAGAGCAGAGGGCTATCTGCTGATACAATTGCTTCCTTACCCTCCATAAACTTCAAGGCAGGGAGCGGTCAGACTGGAAGCAACGATTCATGTGTCATTTGTCGGTTGGATTTCGAGGACGATGAAACCCTGACTGTTCTTTCCTGCAAACACTCCTACCATTCGGAGTGCATAAATAATTGGTTAAAAATAAACAAGGTCTGCCCTGTTTGCAGTGCTGAAGTGAGTTCTACAGCTGGTGGGAGCAGTTAAGTTAGTTGTAGCATGTGCTATGGAATGTACCAAAATCAACATCTCACGAAGTTAAACGACGAAGGATTTTAATTTTTGTTTTGTTTTTTTTTTGTTTTTTTATAATCATTTTGCATACCCATTTCAGTTCTGAGTATGTGTGGAAAATGTGTCTGGTGGGTCATACAATCTCCGGTTTGATTCTGTAAACCAAGCCAAGATGTCATAGTCATGTGAATCTCTAATTTTTTATTCTCTTGCCTTGGCTTGGCTTCGGTGTTTAAACATAAATTTGGCCGCCGCCGGGGATAGCCAGGTTTTGTTTTCGAGGCCATTAGAAAGAAACTCGCACTTCTTCCAAATTTGATGCTCTTGGGATGTGAATTCTTCTGTACTACTTTTGAGCAACTACTTCCACTCCTCCATGTATATGATATCATATACAACTCACTCCACTTAATACTATTGTTGAAAACTATTTCTAA

Coding sequence (CDS)

AACGAAGCCACCACTAACGCCACCAAACTTGGTTTTGATGGAGTCAAGCCACCGCCCACCACCGCCACCACCGCCTCCTCCGACCTTGAACACAACCCTAATTCCAATTCATCGCCATCGTCTGCAGACCCCCACAATGAGACTACTGGATCCGACTCCACTTCTCGCCAATCCGCTAGAACTCCCTTCACTAACCTCAACCAGGTCGATGCTGACCTTGCCCTCGCACGTACCCTTCAAGAACAGAACGAAGCCACCACTAACGCCACCAAACTTGGTTTTGATGGAGTCAAGCCACCGCCCACCACCGCCACCACCGCCTCCTCCGACCTTGAACACAACCCTAATTCCAATTCATCGCCATCGTCTGCAGACCCCCACAATGAGACTACTGGATCCGACTCCACTTCTCGCCAATCCGCTAGAACTCCCTTCACTAACCTCAACCAGGTCGATGCTGACCTTGCCCTCGCACGTACCCTTCAAGAACAGGAAAGGGCATACCTGAGGCTTAGAATGGTGAGTATGGGGATTGATTTTGGAAGTTGGGAAGGTGGAAGTTATGCATTAGATGACGAGGACGGTTTTGGTGATCTGCACGATCATACAGAATCTGATGGAGATGATGATGATGAGGAGTTTGATGGAACAAATGTCAATGATGACGACGATGTGTTTGATGTGCATGCTCGTGAAGATGGTGGAGAGCATATCAACCCCAGCTTTGAACTTGATCCTGGTAATTTTTTGAGTGACGAGGCTTATGCTAGAGCCTTACAAGATTCTGAAGACAGGGAAATGGCTGCCAGATTGATGGCCCTTGCTGGATTACATGATGAGGAAGCAGATGACACGGACGATCAAGGCGAAAATTCTCAGGATACGTGGGAGGATGTTGACCCAGATGAACTGTCGTACGAGGAGTTGCTCGCATTGGGTGAAGTGGTAGGAACTGAGAGCAGAGGGCTATCTGCTGATACAATTGCTTCCTTACCCTCCATAAACTTCAAGGCAGGGAGCGGTCAGACTGGAAGCAACGATTCATGTGTCATTTGTCGGTTGGATTTCGAGGACGATGAAACCCTGACTGTTCTTTCCTGCAAACACTCCTACCATTCGGAGTGCATAAATAATTGGTTAAAAATAAACAAGGTCTGCCCTGTTTGCAGTGCTGAAGTGAGTTCTACAGCTGGTGGGAGCAGTTAA

Protein sequence

NEATTNATKLGFDGVKPPPTTATTASSDLEHNPNSNSSPSSADPHNETTGSDSTSRQSARTPFTNLNQVDADLALARTLQEQNEATTNATKLGFDGVKPPPTTATTASSDLEHNPNSNSSPSSADPHNETTGSDSTSRQSARTPFTNLNQVDADLALARTLQEQERAYLRLRMVSMGIDFGSWEGGSYALDDEDGFGDLHDHTESDGDDDDEEFDGTNVNDDDDVFDVHAREDGGEHINPSFELDPGNFLSDEAYARALQDSEDREMAARLMALAGLHDEEADDTDDQGENSQDTWEDVDPDELSYEELLALGEVVGTESRGLSADTIASLPSINFKAGSGQTGSNDSCVICRLDFEDDETLTVLSCKHSYHSECINNWLKINKVCPVCSAEVSSTAGGSS

Homology

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BLAST of Cp4.1LG01g04320 vs. ExPASy Swiss-Prot
Match: Q9LT17 (E3 ubiquitin ligase BIG BROTHER-related OS=Arabidopsis thaliana OX=3702 GN=BBR PE=2 SV=1)

HSP 1 Score: 293.9 bits (751), Expect = 2.8e-78
Identity = 165/262 (62.98%), Postives = 198/262 (75.57%), Query Frame = 0


Query: 140 SARTPFTNLNQVDADLALARTLQEQERAYLRLRMVSMGIDFGSWEGGSYALDDEDGFGDL 199
           SAR PFTNL+Q+DADLALARTLQEQERAY+ L M S   D+GSWE GSY   DED F D 
Sbjct: 83  SARVPFTNLSQIDADLALARTLQEQERAYMMLTMNSEISDYGSWETGSYVY-DEDEFDDP 142

Query: 200 HDHTESDGDDDDEEFDGTNVNDDDDVFDVHAREDGGEHINPSFELDPGNFLSDEAYARAL 259
            +  E D D+D+ E D     D  DV +VHA ED  E    S +++   +  DEAYARAL
Sbjct: 143 ENEDEDD-DEDEYETDDDPQEDGLDV-NVHANEDDQEDDGNS-DIEEVAYTDDEAYARAL 202

Query: 260 QDSEDREMAARLMALAGLHDEEADDTDDQGENSQDTWEDVDPDELSYEELLALGEVVGTE 319
           Q++E+R+MAARL AL+GL +   +D +D+   SQD W+++DPDELSYEELLALG++VGTE
Sbjct: 203 QEAEERDMAARLSALSGLANRVVEDLEDESHTSQDAWDEMDPDELSYEELLALGDIVGTE 262

Query: 320 SRGLSADTIASLPSINFKAGSGQTGSNDSCVICRLDFEDDETLTVLSCKHSYHSECINNW 379
           SRGLSADTIASLPS  +K G  Q G+N+SCVICRLD+EDDE L +L CKHSYHSECINNW
Sbjct: 263 SRGLSADTIASLPSKRYKEGDNQNGTNESCVICRLDYEDDEDLILLPCKHSYHSECINNW 322

Query: 380 LKINKVCPVCSAEVSSTAGGSS 402
           LKINKVCPVCSAEVS++  G S
Sbjct: 323 LKINKVCPVCSAEVSTSTSGQS 340

[Close]

BLAST of Cp4.1LG01g04320 vs. ExPASy Swiss-Prot
Match: Q8L649 (E3 ubiquitin-protein ligase BIG BROTHER OS=Arabidopsis thaliana OX=3702 GN=BB PE=1 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 1.8e-24
Identity = 63/145 (43.45%), Postives = 90/145 (62.07%), Query Frame = 0


Query: 252 DEAYARALQDSEDREMAARLMALAGLHDEEADDTDDQGENSQDTW-EDVDPDELSYEELL 311
           +   AR++Q  +  E +     +A  HD          ++ Q +W +D+DPD ++YEEL+
Sbjct: 106 ENTVARSVQIGDTDEHSEAEECIANEHDP---------DSPQVSWQDDIDPDTMTYEELV 165

Query: 312 ALGEVVGTESRGLSADTIASLPSINFKAGS--GQTGSNDSCVICRLDFEDDETLTVLSCK 371
            LGE VGTESRGLS + I +LP+  +K GS   +  + + CVIC+L ++  E    L CK
Sbjct: 166 ELGEAVGTESRGLSQELIETLPTKKYKFGSIFSRKRAGERCVICQLKYKIGERQMNLPCK 225

Query: 372 HSYHSECINNWLKINKVCPVCSAEV 394
           H YHSECI+ WL INKVCPVC++EV
Sbjct: 226 HVYHSECISKWLSINKVCPVCNSEV 241

[Close]

BLAST of Cp4.1LG01g04320 vs. ExPASy Swiss-Prot
Match: Q9H0F5 (E3 ubiquitin-protein ligase RNF38 OS=Homo sapiens OX=9606 GN=RNF38 PE=1 SV=4)

HSP 1 Score: 80.5 bits (197), Expect = 4.8e-14
Identity = 41/99 (41.41%), Postives = 59/99 (59.60%), Query Frame = 0


Query: 298 DVDPDEL-SYEELLALGEVVG-TESRGLSADTIASLPSINFKAGSGQTGSNDSCVICRLD 357
           DV+  E+ +YE LL L E +G  + RGL+   I  LPS  F   + Q+     CV+C  D
Sbjct: 411 DVEDGEVENYEALLNLAERLGEAKPRGLTKADIEQLPSYRFNPNNHQS-EQTLCVVCMCD 470

Query: 358 FEDDETLTVLSCKHSYHSECINNWLKINKVCPVCSAEVS 395
           FE  + L VL C H +H++C++ WLK N+ CP+C A+ S
Sbjct: 471 FESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADAS 508

[Close]

BLAST of Cp4.1LG01g04320 vs. ExPASy Swiss-Prot
Match: Q7L0R7 (RING finger protein 44 OS=Homo sapiens OX=9606 GN=RNF44 PE=1 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 4.8e-14
Identity = 43/99 (43.43%), Postives = 59/99 (59.60%), Query Frame = 0


Query: 298 DVDPDEL-SYEELLALGEVVG-TESRGLSADTIASLPSINFKAGSGQTGSNDSCVICRLD 357
           DVD  E+ +YE LL L E +G  + RGL+   I  LPS  F   S Q+     CV+C  D
Sbjct: 328 DVDDVEMENYEALLNLAERLGDAKPRGLTKADIEQLPSYRFNPDSHQS-EQTLCVVCFSD 387

Query: 358 FEDDETLTVLSCKHSYHSECINNWLKINKVCPVCSAEVS 395
           FE  + L VL C H +H++C++ WLK N+ CP+C A+ S
Sbjct: 388 FEARQLLRVLPCNHEFHTKCVDKWLKANRTCPICRADAS 425

[Close]

BLAST of Cp4.1LG01g04320 vs. ExPASy Swiss-Prot
Match: Q3UHJ8 (RING finger protein 44 OS=Mus musculus OX=10090 GN=Rnf44 PE=2 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 6.3e-14
Identity = 43/99 (43.43%), Postives = 59/99 (59.60%), Query Frame = 0


Query: 298 DVDPDEL-SYEELLALGEVVG-TESRGLSADTIASLPSINFKAGSGQTGSNDSCVICRLD 357
           DVD  E+ +YE LL L E +G  + RGL+   I  LPS  F   S Q+     CV+C  D
Sbjct: 303 DVDDVEMENYEALLNLAERLGDAKPRGLTKADIEQLPSYRFNPDSHQS-EQTLCVVCFSD 362

Query: 358 FEDDETLTVLSCKHSYHSECINNWLKINKVCPVCSAEVS 395
           FE  + L VL C H +H++C++ WLK N+ CP+C A+ S
Sbjct: 363 FEVRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADAS 400

[Close]

BLAST of Cp4.1LG01g04320 vs. NCBI nr
Match: XP_023532704.1 (E3 ubiquitin ligase BIG BROTHER-related-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023532710.1 E3 ubiquitin ligase BIG BROTHER-related-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 616 bits (1589), Expect = 1.06e-220
Identity = 319/320 (99.69%), Postives = 320/320 (100.00%), Query Frame = 0


Query: 82  QNEATTNATKLGFDGVKPPPTTATTASSDLEHNPNSNSSPSSADPHNETTGSDSTSRQSA 141
           +NEATTNATKLGFDGVKPPPTTATTASSDLEHNPNSNSSPSSADPHNETTGSDSTSRQSA
Sbjct: 2   ENEATTNATKLGFDGVKPPPTTATTASSDLEHNPNSNSSPSSADPHNETTGSDSTSRQSA 61

Query: 142 RTPFTNLNQVDADLALARTLQEQERAYLRLRMVSMGIDFGSWEGGSYALDDEDGFGDLHD 201
           RTPFTNLNQVDADLALARTLQEQERAYLRLRMVSMGIDFGSWEGGSYALDDEDGFGDLHD
Sbjct: 62  RTPFTNLNQVDADLALARTLQEQERAYLRLRMVSMGIDFGSWEGGSYALDDEDGFGDLHD 121

Query: 202 HTESDGDDDDEEFDGTNVNDDDDVFDVHAREDGGEHINPSFELDPGNFLSDEAYARALQD 261
           HTESDGDDDDEEFDGTNVNDDDDVFDVHAREDGGEHINPSFELDPGNFLSDEAYARALQD
Sbjct: 122 HTESDGDDDDEEFDGTNVNDDDDVFDVHAREDGGEHINPSFELDPGNFLSDEAYARALQD 181

Query: 262 SEDREMAARLMALAGLHDEEADDTDDQGENSQDTWEDVDPDELSYEELLALGEVVGTESR 321
           SEDREMAARLMALAGLHDEEADDTDDQGENSQDTWEDVDPDELSYEELLALGEVVGTESR
Sbjct: 182 SEDREMAARLMALAGLHDEEADDTDDQGENSQDTWEDVDPDELSYEELLALGEVVGTESR 241

Query: 322 GLSADTIASLPSINFKAGSGQTGSNDSCVICRLDFEDDETLTVLSCKHSYHSECINNWLK 381
           GLSADTIASLPSINFKAGSGQTGSNDSCVICRLDFEDDETLTVLSCKHSYHSECINNWLK
Sbjct: 242 GLSADTIASLPSINFKAGSGQTGSNDSCVICRLDFEDDETLTVLSCKHSYHSECINNWLK 301

Query: 382 INKVCPVCSAEVSSTAGGSS 401
           INKVCPVCSAEVSSTAGGSS
Sbjct: 302 INKVCPVCSAEVSSTAGGSS 321

[Close]

BLAST of Cp4.1LG01g04320 vs. NCBI nr
Match: KAG6600120.1 (E3 ubiquitin ligase BIG BROTHER-related, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 602 bits (1551), Expect = 6.72e-215
Identity = 314/321 (97.82%), Postives = 317/321 (98.75%), Query Frame = 0


Query: 82  QNEATTNATKLGFDGVKPPPTTATTASSDLEHNPNSNSSPSSADPHNETTGSDSTSRQSA 141
           +NEATTNATKLGFDGVKPPPTTATTASSDLEHNPNSNSSPSSADPHNETTGSDSTSRQSA
Sbjct: 2   ENEATTNATKLGFDGVKPPPTTATTASSDLEHNPNSNSSPSSADPHNETTGSDSTSRQSA 61

Query: 142 RTPFTNLNQVDADLALARTLQEQERAYLRLRMVSMGIDFGSWEGGSYALDDEDGFGDLHD 201
           RTPFTNLNQVDADLALARTLQEQERAYLRLRMVSMGIDFGSWEGGSYALDDEDGFGDLHD
Sbjct: 62  RTPFTNLNQVDADLALARTLQEQERAYLRLRMVSMGIDFGSWEGGSYALDDEDGFGDLHD 121

Query: 202 HTESDGDDDDEE-FDGTNVNDDDDVFDVHAREDGGEHINPSFELDPGNFLSDEAYARALQ 261
           HTESDGDDD+EE FDGT+VNDDDDVFDVHAREDGGEH NPSFELDPGNF SDEAYARALQ
Sbjct: 122 HTESDGDDDEEEEFDGTDVNDDDDVFDVHAREDGGEHSNPSFELDPGNFSSDEAYARALQ 181

Query: 262 DSEDREMAARLMALAGLHDEEADDTDDQGENSQDTWEDVDPDELSYEELLALGEVVGTES 321
           DSEDREMAARLMALAGLHDEEADDTDDQGENSQDTWEDVDPDELSYEELLALGEVVGTES
Sbjct: 182 DSEDREMAARLMALAGLHDEEADDTDDQGENSQDTWEDVDPDELSYEELLALGEVVGTES 241

Query: 322 RGLSADTIASLPSINFKAGSGQTGSNDSCVICRLDFEDDETLTVLSCKHSYHSECINNWL 381
           RGLSADTIASLPSINFKAGSGQTGSNDSCVICRLDFEDDETLTVLSCKHSYHSECINNWL
Sbjct: 242 RGLSADTIASLPSINFKAGSGQTGSNDSCVICRLDFEDDETLTVLSCKHSYHSECINNWL 301

Query: 382 KINKVCPVCSAEVSSTAGGSS 401
           KINKVCPVCSAEV STAGGSS
Sbjct: 302 KINKVCPVCSAEVCSTAGGSS 322

[Close]

BLAST of Cp4.1LG01g04320 vs. NCBI nr
Match: KAG7030792.1 (E3 ubiquitin ligase BIG BROTHER-related, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 600 bits (1547), Expect = 2.73e-214
Identity = 313/321 (97.51%), Postives = 316/321 (98.44%), Query Frame = 0


Query: 82  QNEATTNATKLGFDGVKPPPTTATTASSDLEHNPNSNSSPSSADPHNETTGSDSTSRQSA 141
           +NEATTNATKLGFDGVKPPPTTATTASSDLEHNPNSNSSPSSADPHNETTGSDSTSRQSA
Sbjct: 2   ENEATTNATKLGFDGVKPPPTTATTASSDLEHNPNSNSSPSSADPHNETTGSDSTSRQSA 61

Query: 142 RTPFTNLNQVDADLALARTLQEQERAYLRLRMVSMGIDFGSWEGGSYALDDEDGFGDLHD 201
           RTPFTNLNQVDADLALARTLQEQERAYLRLRMVSMGIDFGSWEGGSYALDDEDGFGDLHD
Sbjct: 62  RTPFTNLNQVDADLALARTLQEQERAYLRLRMVSMGIDFGSWEGGSYALDDEDGFGDLHD 121

Query: 202 HTESDGDDDDEE-FDGTNVNDDDDVFDVHAREDGGEHINPSFELDPGNFLSDEAYARALQ 261
           HTESDGDDD+EE FDGT+VNDDDDVFDVHAREDGGEH NPSFELDPGNF SDEAYARALQ
Sbjct: 122 HTESDGDDDEEEEFDGTDVNDDDDVFDVHAREDGGEHSNPSFELDPGNFSSDEAYARALQ 181

Query: 262 DSEDREMAARLMALAGLHDEEADDTDDQGENSQDTWEDVDPDELSYEELLALGEVVGTES 321
           DSEDREMAARLMALAGLHDEEADDTDDQGENSQDTWEDVDPDELSYEELLALGEVVGTES
Sbjct: 182 DSEDREMAARLMALAGLHDEEADDTDDQGENSQDTWEDVDPDELSYEELLALGEVVGTES 241

Query: 322 RGLSADTIASLPSINFKAGSGQTGSNDSCVICRLDFEDDETLTVLSCKHSYHSECINNWL 381
           RGLSADTIASLPSINFKAGSGQTGSNDSCVICRLDFEDDETLTVLSCKHSYHSECINNWL
Sbjct: 242 RGLSADTIASLPSINFKAGSGQTGSNDSCVICRLDFEDDETLTVLSCKHSYHSECINNWL 301

Query: 382 KINKVCPVCSAEVSSTAGGSS 401
           KINKVCPVCSAEV ST GGSS
Sbjct: 302 KINKVCPVCSAEVCSTVGGSS 322

[Close]

BLAST of Cp4.1LG01g04320 vs. NCBI nr
Match: XP_022943010.1 (E3 ubiquitin ligase BIG BROTHER-related-like [Cucurbita moschata])

HSP 1 Score: 596 bits (1536), Expect = 1.12e-212
Identity = 311/320 (97.19%), Postives = 314/320 (98.12%), Query Frame = 0


Query: 82  QNEATTNATKLGFDGVKPPPTTATTASSDLEHNPNSNSSPSSADPHNETTGSDSTSRQSA 141
           +NEATTNATKLGFDGVKPPPTTA   SSDLEHNPNSNSSPSSADPHNETTGSDSTSRQSA
Sbjct: 2   ENEATTNATKLGFDGVKPPPTTA---SSDLEHNPNSNSSPSSADPHNETTGSDSTSRQSA 61

Query: 142 RTPFTNLNQVDADLALARTLQEQERAYLRLRMVSMGIDFGSWEGGSYALDDEDGFGDLHD 201
           RTPFTNLNQVDADLALARTLQEQERAYLRLRMVSMGIDFGSWE GSYALDDEDGFGDLHD
Sbjct: 62  RTPFTNLNQVDADLALARTLQEQERAYLRLRMVSMGIDFGSWEDGSYALDDEDGFGDLHD 121

Query: 202 HTESDGDDDDEEFDGTNVNDDDDVFDVHAREDGGEHINPSFELDPGNFLSDEAYARALQD 261
           HTESDGDDD+EEFDGT+VNDDDDVFDVHAREDGGEHINPSFELDPGNF SDEAYARALQD
Sbjct: 122 HTESDGDDDEEEFDGTDVNDDDDVFDVHAREDGGEHINPSFELDPGNFSSDEAYARALQD 181

Query: 262 SEDREMAARLMALAGLHDEEADDTDDQGENSQDTWEDVDPDELSYEELLALGEVVGTESR 321
           SEDREMAARLMALAGLHDEEADDTDDQGENSQDTWEDVDPDELSYEELLALGEVVGTESR
Sbjct: 182 SEDREMAARLMALAGLHDEEADDTDDQGENSQDTWEDVDPDELSYEELLALGEVVGTESR 241

Query: 322 GLSADTIASLPSINFKAGSGQTGSNDSCVICRLDFEDDETLTVLSCKHSYHSECINNWLK 381
           GLSADTIASLPSINFKAGSGQTGSNDSCVICRLDFEDDETLTVLSCKHSYHSECINNWLK
Sbjct: 242 GLSADTIASLPSINFKAGSGQTGSNDSCVICRLDFEDDETLTVLSCKHSYHSECINNWLK 301

Query: 382 INKVCPVCSAEVSSTAGGSS 401
           INKVCPVCSAEV STAGGSS
Sbjct: 302 INKVCPVCSAEVCSTAGGSS 318

[Close]

BLAST of Cp4.1LG01g04320 vs. NCBI nr
Match: XP_022987977.1 (E3 ubiquitin ligase BIG BROTHER-related-like [Cucurbita maxima])

HSP 1 Score: 588 bits (1517), Expect = 1.26e-209
Identity = 310/327 (94.80%), Postives = 316/327 (96.64%), Query Frame = 0


Query: 82  QNEATTNATKLGFDGVKPPPTTATTAS------SDLEHNPNSNSSPSSADPHNETTGSDS 141
           +NEATTNATKLGFDGVKPPPTTATTA+      SDLEHNPNSNSSPSSADPHNETTGSDS
Sbjct: 2   ENEATTNATKLGFDGVKPPPTTATTATTATTAPSDLEHNPNSNSSPSSADPHNETTGSDS 61

Query: 142 TSRQSARTPFTNLNQVDADLALARTLQEQERAYLRLRMVSMGIDFGSWEGGSYALDDEDG 201
           TSRQSARTPFTNLNQVDADLALARTLQEQERAYLRLRMVSMGIDFGSWEGGSYALDDED 
Sbjct: 62  TSRQSARTPFTNLNQVDADLALARTLQEQERAYLRLRMVSMGIDFGSWEGGSYALDDEDS 121

Query: 202 FGDLHDHTESDGDDDDEE-FDGTNVNDDDDVFDVHAREDGGEHINPSFELDPGNFLSDEA 261
           FGDLHDHTESDGD+++EE FDGT+VNDDDDVFDVHAREDGGEH NPSFELDPGNF SDEA
Sbjct: 122 FGDLHDHTESDGDEEEEEEFDGTDVNDDDDVFDVHAREDGGEHSNPSFELDPGNFSSDEA 181

Query: 262 YARALQDSEDREMAARLMALAGLHDEEADDTDDQGENSQDTWEDVDPDELSYEELLALGE 321
           YARALQDSEDREMAARLMALAGLHDEEADDTDDQGENSQDTWEDVDPDELSYEELLALGE
Sbjct: 182 YARALQDSEDREMAARLMALAGLHDEEADDTDDQGENSQDTWEDVDPDELSYEELLALGE 241

Query: 322 VVGTESRGLSADTIASLPSINFKAGSGQTGSNDSCVICRLDFEDDETLTVLSCKHSYHSE 381
           VVGTESRGLSADTIASLPSINFKAGSGQTGSNDSCVICRLDFEDDETLTVLSCKHSYHSE
Sbjct: 242 VVGTESRGLSADTIASLPSINFKAGSGQTGSNDSCVICRLDFEDDETLTVLSCKHSYHSE 301

Query: 382 CINNWLKINKVCPVCSAEVSSTAGGSS 401
           CINNWLKINKVCPVCSAEV STAGGSS
Sbjct: 302 CINNWLKINKVCPVCSAEVCSTAGGSS 328

[Close]

BLAST of Cp4.1LG01g04320 vs. ExPASy TrEMBL
Match: A0A6J1FX96 (E3 ubiquitin ligase BIG BROTHER-related-like OS=Cucurbita moschata OX=3662 GN=LOC111447874 PE=4 SV=1)

HSP 1 Score: 596 bits (1536), Expect = 5.40e-213
Identity = 311/320 (97.19%), Postives = 314/320 (98.12%), Query Frame = 0


Query: 82  QNEATTNATKLGFDGVKPPPTTATTASSDLEHNPNSNSSPSSADPHNETTGSDSTSRQSA 141
           +NEATTNATKLGFDGVKPPPTTA   SSDLEHNPNSNSSPSSADPHNETTGSDSTSRQSA
Sbjct: 2   ENEATTNATKLGFDGVKPPPTTA---SSDLEHNPNSNSSPSSADPHNETTGSDSTSRQSA 61

Query: 142 RTPFTNLNQVDADLALARTLQEQERAYLRLRMVSMGIDFGSWEGGSYALDDEDGFGDLHD 201
           RTPFTNLNQVDADLALARTLQEQERAYLRLRMVSMGIDFGSWE GSYALDDEDGFGDLHD
Sbjct: 62  RTPFTNLNQVDADLALARTLQEQERAYLRLRMVSMGIDFGSWEDGSYALDDEDGFGDLHD 121

Query: 202 HTESDGDDDDEEFDGTNVNDDDDVFDVHAREDGGEHINPSFELDPGNFLSDEAYARALQD 261
           HTESDGDDD+EEFDGT+VNDDDDVFDVHAREDGGEHINPSFELDPGNF SDEAYARALQD
Sbjct: 122 HTESDGDDDEEEFDGTDVNDDDDVFDVHAREDGGEHINPSFELDPGNFSSDEAYARALQD 181

Query: 262 SEDREMAARLMALAGLHDEEADDTDDQGENSQDTWEDVDPDELSYEELLALGEVVGTESR 321
           SEDREMAARLMALAGLHDEEADDTDDQGENSQDTWEDVDPDELSYEELLALGEVVGTESR
Sbjct: 182 SEDREMAARLMALAGLHDEEADDTDDQGENSQDTWEDVDPDELSYEELLALGEVVGTESR 241

Query: 322 GLSADTIASLPSINFKAGSGQTGSNDSCVICRLDFEDDETLTVLSCKHSYHSECINNWLK 381
           GLSADTIASLPSINFKAGSGQTGSNDSCVICRLDFEDDETLTVLSCKHSYHSECINNWLK
Sbjct: 242 GLSADTIASLPSINFKAGSGQTGSNDSCVICRLDFEDDETLTVLSCKHSYHSECINNWLK 301

Query: 382 INKVCPVCSAEVSSTAGGSS 401
           INKVCPVCSAEV STAGGSS
Sbjct: 302 INKVCPVCSAEVCSTAGGSS 318

[Close]

BLAST of Cp4.1LG01g04320 vs. ExPASy TrEMBL
Match: A0A6J1JBU8 (E3 ubiquitin ligase BIG BROTHER-related-like OS=Cucurbita maxima OX=3661 GN=LOC111485359 PE=4 SV=1)

HSP 1 Score: 588 bits (1517), Expect = 6.12e-210
Identity = 310/327 (94.80%), Postives = 316/327 (96.64%), Query Frame = 0


Query: 82  QNEATTNATKLGFDGVKPPPTTATTAS------SDLEHNPNSNSSPSSADPHNETTGSDS 141
           +NEATTNATKLGFDGVKPPPTTATTA+      SDLEHNPNSNSSPSSADPHNETTGSDS
Sbjct: 2   ENEATTNATKLGFDGVKPPPTTATTATTATTAPSDLEHNPNSNSSPSSADPHNETTGSDS 61

Query: 142 TSRQSARTPFTNLNQVDADLALARTLQEQERAYLRLRMVSMGIDFGSWEGGSYALDDEDG 201
           TSRQSARTPFTNLNQVDADLALARTLQEQERAYLRLRMVSMGIDFGSWEGGSYALDDED 
Sbjct: 62  TSRQSARTPFTNLNQVDADLALARTLQEQERAYLRLRMVSMGIDFGSWEGGSYALDDEDS 121

Query: 202 FGDLHDHTESDGDDDDEE-FDGTNVNDDDDVFDVHAREDGGEHINPSFELDPGNFLSDEA 261
           FGDLHDHTESDGD+++EE FDGT+VNDDDDVFDVHAREDGGEH NPSFELDPGNF SDEA
Sbjct: 122 FGDLHDHTESDGDEEEEEEFDGTDVNDDDDVFDVHAREDGGEHSNPSFELDPGNFSSDEA 181

Query: 262 YARALQDSEDREMAARLMALAGLHDEEADDTDDQGENSQDTWEDVDPDELSYEELLALGE 321
           YARALQDSEDREMAARLMALAGLHDEEADDTDDQGENSQDTWEDVDPDELSYEELLALGE
Sbjct: 182 YARALQDSEDREMAARLMALAGLHDEEADDTDDQGENSQDTWEDVDPDELSYEELLALGE 241

Query: 322 VVGTESRGLSADTIASLPSINFKAGSGQTGSNDSCVICRLDFEDDETLTVLSCKHSYHSE 381
           VVGTESRGLSADTIASLPSINFKAGSGQTGSNDSCVICRLDFEDDETLTVLSCKHSYHSE
Sbjct: 242 VVGTESRGLSADTIASLPSINFKAGSGQTGSNDSCVICRLDFEDDETLTVLSCKHSYHSE 301

Query: 382 CINNWLKINKVCPVCSAEVSSTAGGSS 401
           CINNWLKINKVCPVCSAEV STAGGSS
Sbjct: 302 CINNWLKINKVCPVCSAEVCSTAGGSS 328

[Close]

BLAST of Cp4.1LG01g04320 vs. ExPASy TrEMBL
Match: A0A6J1KGM7 (E3 ubiquitin ligase BIG BROTHER-related OS=Cucurbita maxima OX=3661 GN=LOC111493709 PE=4 SV=1)

HSP 1 Score: 508 bits (1307), Expect = 4.65e-178
Identity = 275/325 (84.62%), Postives = 287/325 (88.31%), Query Frame = 0


Query: 82  QNEATTNATKLGFDGVKPPPTTATTASSDLEHNPNSNSSPSS-ADPHNETTGSDSTS--- 141
           +NE TTNATKLG DGVKP PTT TTASSD E NP SN SP S ADP N+ TGSDSTS   
Sbjct: 2   ENETTTNATKLGSDGVKPTPTTTTTASSDHEQNPTSNPSPPSVADPQNDPTGSDSTSLQT 61

Query: 142 --RQSARTPFTNLNQVDADLALARTLQEQERAYLRLRMVSMGIDFGSWEGGSYALDDEDG 201
             R S+RTPFTNL QVDADLALARTLQEQERAYL LRM S G DFGSWE GSY LDDEDG
Sbjct: 62  PSRHSSRTPFTNLTQVDADLALARTLQEQERAYLMLRMTSEGSDFGSWEAGSYVLDDEDG 121

Query: 202 FGDLHDHTESDGDDDDEEFDGTNVNDDDDVFDVHAREDGGEHINPSFELDPGNFLSDEAY 261
           FGD HDHTESDGDDD  EFDGT+VNDDDDVFDVHA EDG E  NP+FELDPGNF SDEAY
Sbjct: 122 FGDPHDHTESDGDDD--EFDGTDVNDDDDVFDVHAHEDG-EDNNPNFELDPGNFSSDEAY 181

Query: 262 ARALQDSEDREMAARLMALAGLHDEEADDTDDQGENSQDTWEDVDPDELSYEELLALGEV 321
           ARALQD+EDREMAARL+ALAGL D++ADDTDDQGENSQDTWEDVDPDELSYEELLALGEV
Sbjct: 182 ARALQDAEDREMAARLLALAGLQDQDADDTDDQGENSQDTWEDVDPDELSYEELLALGEV 241

Query: 322 VGTESRGLSADTIASLPSINFKAGSGQTGSNDSCVICRLDFEDDETLTVLSCKHSYHSEC 381
           VGTESRGLSADTIASLPSINFKAGSGQTGS+DSCVICRLDFED+ETLTVLSCKHSYHSEC
Sbjct: 242 VGTESRGLSADTIASLPSINFKAGSGQTGSSDSCVICRLDFEDNETLTVLSCKHSYHSEC 301

Query: 382 INNWLKINKVCPVCSAEVSSTAGGS 400
           INNWLKINKVCPVCS EVS+  G S
Sbjct: 302 INNWLKINKVCPVCSTEVSTATGSS 323

[Close]

BLAST of Cp4.1LG01g04320 vs. ExPASy TrEMBL
Match: A0A6J1GZI2 (E3 ubiquitin ligase BIG BROTHER-related OS=Cucurbita moschata OX=3662 GN=LOC111458563 PE=4 SV=1)

HSP 1 Score: 503 bits (1296), Expect = 2.19e-176
Identity = 273/325 (84.00%), Postives = 284/325 (87.38%), Query Frame = 0


Query: 82  QNEATTNATKLGFDGVKPPPTTATTASSDLEHNPNSNSSPSS-ADPHNETTGSDSTS--- 141
           +NE T NATKLG DGVKP P T TTASSD E NP SN SP S ADP N+ TGSDS S   
Sbjct: 2   ENETTINATKLGSDGVKPTPATTTTASSDHEQNPTSNPSPPSVADPQNDPTGSDSASLQT 61

Query: 142 --RQSARTPFTNLNQVDADLALARTLQEQERAYLRLRMVSMGIDFGSWEGGSYALDDEDG 201
             R S+RTPFTNL QVDADLALARTLQEQERAYL LRM S G DFGSWE GSY LDDEDG
Sbjct: 62  PSRHSSRTPFTNLTQVDADLALARTLQEQERAYLMLRMTSEGSDFGSWEAGSYVLDDEDG 121

Query: 202 FGDLHDHTESDGDDDDEEFDGTNVNDDDDVFDVHAREDGGEHINPSFELDPGNFLSDEAY 261
           FGD HDHTESDGDDD  EFDGT+VNDDDDVFDVHA EDG E  NP+FELDPGNF SDEAY
Sbjct: 122 FGDPHDHTESDGDDD--EFDGTDVNDDDDVFDVHAHEDG-EDNNPNFELDPGNFSSDEAY 181

Query: 262 ARALQDSEDREMAARLMALAGLHDEEADDTDDQGENSQDTWEDVDPDELSYEELLALGEV 321
           ARALQD+EDREMAARL+ALAGL D++ADDTDDQGENSQDTWEDVDPDELSYEELLALGEV
Sbjct: 182 ARALQDAEDREMAARLLALAGLQDQDADDTDDQGENSQDTWEDVDPDELSYEELLALGEV 241

Query: 322 VGTESRGLSADTIASLPSINFKAGSGQTGSNDSCVICRLDFEDDETLTVLSCKHSYHSEC 381
           VGTESRGLSADTIASLPSINFKAGSGQTGS+DSCVICRLDFEDDETLTVLSCKHSYHSEC
Sbjct: 242 VGTESRGLSADTIASLPSINFKAGSGQTGSSDSCVICRLDFEDDETLTVLSCKHSYHSEC 301

Query: 382 INNWLKINKVCPVCSAEVSSTAGGS 400
           INNWLKINKVCPVCS EVS+  G S
Sbjct: 302 INNWLKINKVCPVCSTEVSTATGSS 323

[Close]

BLAST of Cp4.1LG01g04320 vs. ExPASy TrEMBL
Match: A0A6J1CBG2 (E3 ubiquitin ligase BIG BROTHER-related OS=Momordica charantia OX=3673 GN=LOC111010115 PE=4 SV=1)

HSP 1 Score: 493 bits (1270), Expect = 2.63e-172
Identity = 272/332 (81.93%), Postives = 291/332 (87.65%), Query Frame = 0


Query: 82  QNEATTNATKLGFDGVKPPPTTATTA--SSDLEHNPNSNSSPSSADPHNETTGSDST--- 141
           +NE TTNATKLG +GVKP  TT TTA  SSD E +PNSN+SPS+A+P NE TGSDST   
Sbjct: 2   ENETTTNATKLGSEGVKPTATTTTTAAASSDQELDPNSNASPSAAEPQNEGTGSDSTLLQ 61

Query: 142 --SRQSARTPFTNLNQVDADLALARTLQEQERAYLRLRMVSMGIDFGSWEGGSYALDDED 201
             SR S+RTPFTNL QVDADLALARTLQEQERAYL LRM + G DFGSWE GSY  DDED
Sbjct: 62  PPSRHSSRTPFTNLTQVDADLALARTLQEQERAYLMLRMTNEGSDFGSWEAGSYVFDDED 121

Query: 202 GFGDLHDHTESDGDDDDEEFDGTNVNDD---DDVFDVHAREDGGEHINPSFELDPGNFLS 261
           GFG+ HDHTESDG+DD  EFDGT++NDD   DDVFDVHA EDGG+  NP+ ELDPGNF S
Sbjct: 122 GFGEPHDHTESDGEDD--EFDGTDINDDGDDDDVFDVHAHEDGGDDNNPNLELDPGNFSS 181

Query: 262 DEAYARALQDSEDRE-MAARLMALAGLHDEEADDTDDQGENSQDTWEDVDPDELSYEELL 321
           DEAYARALQD+EDRE MAARL+ALAGL D EADD+DDQGENSQDTWEDVDPDELSYEELL
Sbjct: 182 DEAYARALQDAEDREEMAARLLALAGLQDHEADDSDDQGENSQDTWEDVDPDELSYEELL 241

Query: 322 ALGEVVGTESRGLSADTIASLPSINFKAGSGQTGSNDSCVICRLDFEDDETLTVLSCKHS 381
           ALGEVVGTESRGLSADTIASLPSINFK+GSGQTGSNDSCVICRLDFEDDETLTVLSCKHS
Sbjct: 242 ALGEVVGTESRGLSADTIASLPSINFKSGSGQTGSNDSCVICRLDFEDDETLTVLSCKHS 301

Query: 382 YHSECINNWLKINKVCPVCSAEVSST-AGGSS 401
           YHSECINNWLKINKVCPVCSAEVS+T A GSS
Sbjct: 302 YHSECINNWLKINKVCPVCSAEVSTTTAAGSS 331

[Close]

BLAST of Cp4.1LG01g04320 vs. TAIR 10
Match: AT3G19910.1 (RING/U-box superfamily protein )

HSP 1 Score: 293.9 bits (751), Expect = 2.0e-79
Identity = 165/262 (62.98%), Postives = 198/262 (75.57%), Query Frame = 0


Query: 140 SARTPFTNLNQVDADLALARTLQEQERAYLRLRMVSMGIDFGSWEGGSYALDDEDGFGDL 199
           SAR PFTNL+Q+DADLALARTLQEQERAY+ L M S   D+GSWE GSY   DED F D 
Sbjct: 83  SARVPFTNLSQIDADLALARTLQEQERAYMMLTMNSEISDYGSWETGSYVY-DEDEFDDP 142

Query: 200 HDHTESDGDDDDEEFDGTNVNDDDDVFDVHAREDGGEHINPSFELDPGNFLSDEAYARAL 259
            +  E D D+D+ E D     D  DV +VHA ED  E    S +++   +  DEAYARAL
Sbjct: 143 ENEDEDD-DEDEYETDDDPQEDGLDV-NVHANEDDQEDDGNS-DIEEVAYTDDEAYARAL 202

Query: 260 QDSEDREMAARLMALAGLHDEEADDTDDQGENSQDTWEDVDPDELSYEELLALGEVVGTE 319
           Q++E+R+MAARL AL+GL +   +D +D+   SQD W+++DPDELSYEELLALG++VGTE
Sbjct: 203 QEAEERDMAARLSALSGLANRVVEDLEDESHTSQDAWDEMDPDELSYEELLALGDIVGTE 262

Query: 320 SRGLSADTIASLPSINFKAGSGQTGSNDSCVICRLDFEDDETLTVLSCKHSYHSECINNW 379
           SRGLSADTIASLPS  +K G  Q G+N+SCVICRLD+EDDE L +L CKHSYHSECINNW
Sbjct: 263 SRGLSADTIASLPSKRYKEGDNQNGTNESCVICRLDYEDDEDLILLPCKHSYHSECINNW 322

Query: 380 LKINKVCPVCSAEVSSTAGGSS 402
           LKINKVCPVCSAEVS++  G S
Sbjct: 323 LKINKVCPVCSAEVSTSTSGQS 340

[Close]

BLAST of Cp4.1LG01g04320 vs. TAIR 10
Match: AT3G63530.1 (RING/U-box superfamily protein )

HSP 1 Score: 115.2 bits (287), Expect = 1.3e-25
Identity = 63/145 (43.45%), Postives = 90/145 (62.07%), Query Frame = 0


Query: 252 DEAYARALQDSEDREMAARLMALAGLHDEEADDTDDQGENSQDTW-EDVDPDELSYEELL 311
           +   AR++Q  +  E +     +A  HD          ++ Q +W +D+DPD ++YEEL+
Sbjct: 106 ENTVARSVQIGDTDEHSEAEECIANEHDP---------DSPQVSWQDDIDPDTMTYEELV 165

Query: 312 ALGEVVGTESRGLSADTIASLPSINFKAGS--GQTGSNDSCVICRLDFEDDETLTVLSCK 371
            LGE VGTESRGLS + I +LP+  +K GS   +  + + CVIC+L ++  E    L CK
Sbjct: 166 ELGEAVGTESRGLSQELIETLPTKKYKFGSIFSRKRAGERCVICQLKYKIGERQMNLPCK 225

Query: 372 HSYHSECINNWLKINKVCPVCSAEV 394
           H YHSECI+ WL INKVCPVC++EV
Sbjct: 226 HVYHSECISKWLSINKVCPVCNSEV 241

[Close]

BLAST of Cp4.1LG01g04320 vs. TAIR 10
Match: AT3G63530.2 (RING/U-box superfamily protein )

HSP 1 Score: 115.2 bits (287), Expect = 1.3e-25
Identity = 63/145 (43.45%), Postives = 90/145 (62.07%), Query Frame = 0


Query: 252 DEAYARALQDSEDREMAARLMALAGLHDEEADDTDDQGENSQDTW-EDVDPDELSYEELL 311
           +   AR++Q  +  E +     +A  HD          ++ Q +W +D+DPD ++YEEL+
Sbjct: 106 ENTVARSVQIGDTDEHSEAEECIANEHDP---------DSPQVSWQDDIDPDTMTYEELV 165

Query: 312 ALGEVVGTESRGLSADTIASLPSINFKAGS--GQTGSNDSCVICRLDFEDDETLTVLSCK 371
            LGE VGTESRGLS + I +LP+  +K GS   +  + + CVIC+L ++  E    L CK
Sbjct: 166 ELGEAVGTESRGLSQELIETLPTKKYKFGSIFSRKRAGERCVICQLKYKIGERQMNLPCK 225

Query: 372 HSYHSECINNWLKINKVCPVCSAEV 394
           H YHSECI+ WL INKVCPVC++EV
Sbjct: 226 HVYHSECISKWLSINKVCPVCNSEV 241

[Close]

BLAST of Cp4.1LG01g04320 vs. TAIR 10
Match: AT3G47180.1 (RING/U-box superfamily protein )

HSP 1 Score: 100.9 bits (250), Expect = 2.4e-21
Identity = 48/119 (40.34%), Postives = 79/119 (66.39%), Query Frame = 0


Query: 277 LHDEEADDTDDQGENSQDTWEDVDPDELSYEELLALGEVVGTESRGLSADTIASLPSINF 336
           L D+E++   ++ ++  +  +++DPD+LSYEEL+ALG+ +G E+RGL+   I++  + + 
Sbjct: 90  LEDQESNSNLEEEDDFLEEEDEIDPDQLSYEELIALGDFIGVENRGLTPIEISTCLNAST 149

Query: 337 KAGSGQTGSNDSCVICRLDFEDDETLTVL-SCKHSYHSECINNWLKINKVCPVCSAEVS 395
              S      D CV+C+++FE+ E+L VL  C H YHSECI  WL+  K+CP+C +E S
Sbjct: 150 YVFSHNKNEIDRCVVCQMEFEERESLVVLRPCDHPYHSECITKWLETKKICPICCSEPS 208

[Close]

BLAST of Cp4.1LG01g04320 vs. TAIR 10
Match: AT3G15070.1 (RING/U-box superfamily protein )

HSP 1 Score: 87.0 bits (214), Expect = 3.6e-17
Identity = 38/100 (38.00%), Postives = 60/100 (60.00%), Query Frame = 0


Query: 299 VDPDELSYEELLALGEVVGTESRGLSADTIASL------PSINFKAGSGQTGSNDSCVIC 358
           +D +++SYEELLAL + +GT   GLS++ +  L        IN + G       DSC IC
Sbjct: 372 LDIEDMSYEELLALSDQIGTVKTGLSSEDVKELLKRRTSTRINLEEGPSTDLETDSCTIC 431

Query: 359 RLDFEDDETLTVLSCKHSYHSECINNWLKINKVCPVCSAE 393
           + ++++++ +  L C H YH+EC+  WL I  VCP+C +E
Sbjct: 432 QENYKNEDKIATLDCMHKYHAECLKKWLVIKNVCPICKSE 471

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g04320 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LT17	2.8e-78	62.98	E3 ubiquitin ligase BIG BROTHER-related OS=Arabidopsis thaliana OX=3702 GN=BBR P...	[more]
Q8L649	1.8e-24	43.45	E3 ubiquitin-protein ligase BIG BROTHER OS=Arabidopsis thaliana OX=3702 GN=BB PE...	[more]
Q9H0F5	4.8e-14	41.41	E3 ubiquitin-protein ligase RNF38 OS=Homo sapiens OX=9606 GN=RNF38 PE=1 SV=4	[more]
Q7L0R7	4.8e-14	43.43	RING finger protein 44 OS=Homo sapiens OX=9606 GN=RNF44 PE=1 SV=1	[more]
Q3UHJ8	6.3e-14	43.43	RING finger protein 44 OS=Mus musculus OX=10090 GN=Rnf44 PE=2 SV=1	[more]

BLAST of Cp4.1LG01g04320 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023532704.1	1.06e-220	99.69	E3 ubiquitin ligase BIG BROTHER-related-like isoform X1 [Cucurbita pepo subsp. p...	[more]
KAG6600120.1	6.72e-215	97.82	E3 ubiquitin ligase BIG BROTHER-related, partial [Cucurbita argyrosperma subsp. ...	[more]
KAG7030792.1	2.73e-214	97.51	E3 ubiquitin ligase BIG BROTHER-related, partial [Cucurbita argyrosperma subsp. ...	[more]
XP_022943010.1	1.12e-212	97.19	E3 ubiquitin ligase BIG BROTHER-related-like [Cucurbita moschata]	[more]
XP_022987977.1	1.26e-209	94.80	E3 ubiquitin ligase BIG BROTHER-related-like [Cucurbita maxima]	[more]

BLAST of Cp4.1LG01g04320 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FX96	5.40e-213	97.19	E3 ubiquitin ligase BIG BROTHER-related-like OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A6J1JBU8	6.12e-210	94.80	E3 ubiquitin ligase BIG BROTHER-related-like OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A6J1KGM7	4.65e-178	84.62	E3 ubiquitin ligase BIG BROTHER-related OS=Cucurbita maxima OX=3661 GN=LOC111493...	[more]
A0A6J1GZI2	2.19e-176	84.00	E3 ubiquitin ligase BIG BROTHER-related OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A6J1CBG2	2.63e-172	81.93	E3 ubiquitin ligase BIG BROTHER-related OS=Momordica charantia OX=3673 GN=LOC111...	[more]

BLAST of Cp4.1LG01g04320 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G19910.1	2.0e-79	62.98	RING/U-box superfamily protein	[more]
AT3G63530.1	1.3e-25	43.45	RING/U-box superfamily protein	[more]
AT3G63530.2	1.3e-25	43.45	RING/U-box superfamily protein	[more]
AT3G47180.1	2.4e-21	40.34	RING/U-box superfamily protein	[more]
AT3G15070.1	3.6e-17	38.00	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 349..389 e-value: 5.2E-6 score: 36.0
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 347..389 e-value: 8.8E-12 score: 45.2
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 349..390 score: 11.943417
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 314..396 e-value: 2.5E-21 score: 77.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 278..300
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 194..220
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 280..300
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 86..147
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 204..220
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..66
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 101..147
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 19..66
None	No IPR available	PANTHER	PTHR47530:SF4	E3 UBIQUITIN LIGASE BIG BROTHER-RELATED	coord: 25..85
None	No IPR available	PANTHER	PTHR47530:SF4	E3 UBIQUITIN LIGASE BIG BROTHER-RELATED	coord: 106..396
None	No IPR available	CDD	cd16454	RING-H2_PA-TM-RING	coord: 349..389 e-value: 4.15287E-17 score: 72.3345
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 343..395
IPR043312	E3 ubiquitin ligase BIG BROTHER-like	PANTHER	PTHR47530	E3 UBIQUITIN LIGASE BIG BROTHER-RELATED	coord: 25..85
IPR043312	E3 ubiquitin ligase BIG BROTHER-like	PANTHER	PTHR47530	E3 UBIQUITIN LIGASE BIG BROTHER-RELATED	coord: 106..396

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g04320.1	Cp4.1LG01g04320.1	mRNA