Cp4.1LG01g04270 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG01g04270
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionLOB domain-containing protein
LocationCp4.1LG01: 1342584 .. 1343725 (+)
RNA-Seq ExpressionCp4.1LG01g04270
SyntenyCp4.1LG01g04270
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGTAATAAATAGGGTGGATGACGTAAGCGGAGAAAGTGATCCCCTCCCATTCTCTATATATATCAGCTCCTCAGGCTCTTCCATTTCCAAACACACATTTCTCTCTCCTCTCCCATTTTCTCTCTCTAGCAGAAAAAAAAAATAATTAAAAAAAAAAAAAAAAACAAAAACAAAAACAAATGGCTTACGTGGCCAAATGTACGAGCTCTCCACCAACGCCGACCACTCTTCCTAACCCCCCCTTATCTTCCTCCGCCACCAACTTCGTGTCGCCTCCCACTTCTCAACAGTCGTCGACGCCGGTCGCGGTGGTTCTCAGCCCCTGCGCCGCCTGCAAGATCCTCCGGCGCCGCTGCATCGAGAAGTGCGTTTTGGCTCCTTATTTTCCTCCGACGGAGCCCCTCAAATTCACCATTGCTCATAGAGTGTTTGGAGCTAGCAATATCATCAAGTTCTTGCAAGTACGCCCACAAAATTTAATTCTTATATTTATTTTCTCTCCCTCTTGTTCGAACCCATGACCTTCTTAAAACCACAATTTAATTTGGCTCATTCCATCGTGCCACAATGCCACAACCTTCAATACTCTGACACCAATTTAAGTTATTAAATTGTGGGTCGTACCAATGGAGAGAGTATTCTTTTTTTATAAACCCATGATCATTCCATAAATTAGATGACGCGGACGTGGGACTTTCATCCTCTAAGAACAACAATTAGATATCACATTACTTTTTATTAACAAGTGGTATCAGAGCATTGAATCAGACACATTTAAGGTTAACTTTTTGAAAGTCAATTTGGTTCGTAAATTATGCAGGAGCTGCCAGAGTGTCAAAGAACAGATGCAGTGAGCAGTATGGTGTATGAAGCAAATGCAAGGCTACGGGATCCAGTGTACGGCAGCGCGGGCGCAATTTGCCAGCTGCAAACGCAAGTGAGCGAGTTGCAGGCACAGCTAGCGAAGGCCAGGGCAGAGGTAGCCAATATGCAGCAACAACAAGCCAACTTATTAGCGTTGATTTGCATGGAAATGAAGCAATCAGCGGAGCCCATTTGGGCATCGCACCTTGCGGATACCAGTTGGTTCCTTGACGATGCTACTCTAAGCGCACCGTGGGAGCCGCTCTGGACATGA

mRNA sequence

ATGAGCTCTCCACCAACGCCGACCACTCTTCCTAACCCCCCCTTATCTTCCTCCGCCACCAACTTCGTGTCGCCTCCCACTTCTCAACAGTCGTCGACGCCGGTCGCGGTGGTTCTCAGCCCCTGCGCCGCCTGCAAGATCCTCCGGCGCCGCTGCATCGAGAAGTGCGTTTTGGCTCCTTATTTTCCTCCGACGGAGCCCCTCAAATTCACCATTGCTCATAGAGTGTTTGGAGCTAGCAATATCATCAAGTTCTTGCAAGAGCTGCCAGAGTGTCAAAGAACAGATGCAGTGAGCAGTATGGTGTATGAAGCAAATGCAAGGCTACGGGATCCAGTGTACGGCAGCGCGGGCGCAATTTGCCAGCTGCAAACGCAAGTGAGCGAGTTGCAGGCACAGCTAGCGAAGGCCAGGGCAGAGGTAGCCAATATGCAGCAACAACAAGCCAACTTATTAGCGTTGATTTGCATGGAAATGAAGCAATCAGCGGAGCCCATTTGGGCATCGCACCTTGCGGATACCAGTTGGTTCCTTGACGATGCTACTCTAAGCGCACCGTGGGAGCCGCTCTGGACATGA

Coding sequence (CDS)

ATGAGCTCTCCACCAACGCCGACCACTCTTCCTAACCCCCCCTTATCTTCCTCCGCCACCAACTTCGTGTCGCCTCCCACTTCTCAACAGTCGTCGACGCCGGTCGCGGTGGTTCTCAGCCCCTGCGCCGCCTGCAAGATCCTCCGGCGCCGCTGCATCGAGAAGTGCGTTTTGGCTCCTTATTTTCCTCCGACGGAGCCCCTCAAATTCACCATTGCTCATAGAGTGTTTGGAGCTAGCAATATCATCAAGTTCTTGCAAGAGCTGCCAGAGTGTCAAAGAACAGATGCAGTGAGCAGTATGGTGTATGAAGCAAATGCAAGGCTACGGGATCCAGTGTACGGCAGCGCGGGCGCAATTTGCCAGCTGCAAACGCAAGTGAGCGAGTTGCAGGCACAGCTAGCGAAGGCCAGGGCAGAGGTAGCCAATATGCAGCAACAACAAGCCAACTTATTAGCGTTGATTTGCATGGAAATGAAGCAATCAGCGGAGCCCATTTGGGCATCGCACCTTGCGGATACCAGTTGGTTCCTTGACGATGCTACTCTAAGCGCACCGTGGGAGCCGCTCTGGACATGA

Protein sequence

MSSPPTPTTLPNPPLSSSATNFVSPPTSQQSSTPVAVVLSPCAACKILRRRCIEKCVLAPYFPPTEPLKFTIAHRVFGASNIIKFLQELPECQRTDAVSSMVYEANARLRDPVYGSAGAICQLQTQVSELQAQLAKARAEVANMQQQQANLLALICMEMKQSAEPIWASHLADTSWFLDDATLSAPWEPLWT
Homology
BLAST of Cp4.1LG01g04270 vs. ExPASy Swiss-Prot
Match: Q9LQR0 (LOB domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=LBD1 PE=2 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 3.6e-52
Identity = 116/182 (63.74%), Postives = 135/182 (74.18%), Query Frame = 0

Query: 16  SSSATNFVSPPTSQQSSTPVAVVLSPCAACKILRRRCIEKCVLAPYFPPTEPLKFTIAHR 75
           S + T  +S  +S   S    VVLSPCAACKILRRRC E+CVLAPYFPPT+P KFTIAHR
Sbjct: 8   SVATTPIISSSSSPPPSLSPRVVLSPCAACKILRRRCAERCVLAPYFPPTDPAKFTIAHR 67

Query: 76  VFGASNIIKFLQELPECQRTDAVSSMVYEANARLRDPVYGSAGAICQLQTQVSELQAQLA 135
           VFGASNIIKFLQELPE QRTDAV+SMVYEA AR+RDPVYG AGAI  LQ QVSELQAQLA
Sbjct: 68  VFGASNIIKFLQELPESQRTDAVNSMVYEAEARIRDPVYGCAGAIYHLQRQVSELQAQLA 127

Query: 136 KARAEVANMQQQQANLLALIC-MEMKQSAEPIWASHLADTSWFLDDATLSAP----WEPL 193
           KA+ E+ NMQ Q++NLL LI  M+ +Q  E    S  ++   FL+D + +      W+PL
Sbjct: 128 KAQVEMVNMQFQRSNLLELIYNMDQQQKQEQDNMSFESNDLGFLEDKSNTNSSMLWWDPL 187

BLAST of Cp4.1LG01g04270 vs. ExPASy Swiss-Prot
Match: Q9SK08 (LOB domain-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=LBD11 PE=2 SV=2)

HSP 1 Score: 193.0 bits (489), Expect = 3.2e-48
Identity = 116/211 (54.98%), Postives = 136/211 (64.45%), Query Frame = 0

Query: 8   TTLPNPPLSSSATNFVSPPTSQQSSTPVAVVLSPCAACKILRRRCIEKCVLAPYFPPTEP 67
           T    P  S S T+   PP S Q      VVLSPCAACKILRRRC +KCVLAPYFPPT+P
Sbjct: 22  TETTTPVNSPSPTSSPPPPPSPQQPPQPPVVLSPCAACKILRRRCADKCVLAPYFPPTDP 81

Query: 68  LKFTIAHRVFGASNIIKFLQELPECQRTDAVSSMVYEANARLRDPVYGSAGAICQLQTQV 127
            KFTIAHRVFGASNIIKFLQELPE QRTDAV+SMVYEA AR+RDPVYG AGAI  LQ QV
Sbjct: 82  AKFTIAHRVFGASNIIKFLQELPESQRTDAVNSMVYEAGARMRDPVYGCAGAIYHLQRQV 141

Query: 128 SELQAQLAKARAEVANMQQQQANLLALI--CMEMKQSAEPIWASHLA-DTSWFLDDATLS 187
           SELQAQLAK + E+  MQ Q+++LL LI    + K S +      ++ ++S+   D  +S
Sbjct: 142 SELQAQLAKTQVELVGMQLQRSSLLELIYNMEQTKLSVQEQGQQKMSFESSFESGDEFIS 201

Query: 188 AP-----------------------WEPLWT 193
           +P                       W+PLWT
Sbjct: 202 SPDEESNDLGFLEDNNNNNNSSMSWWDPLWT 232

BLAST of Cp4.1LG01g04270 vs. ExPASy Swiss-Prot
Match: Q8LBW3 (LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 SV=2)

HSP 1 Score: 147.9 bits (372), Expect = 1.2e-34
Identity = 71/108 (65.74%), Postives = 86/108 (79.63%), Query Frame = 0

Query: 40  SPCAACKILRRRCIEKCVLAPYFPPTEPLKFTIAHRVFGASNIIKFLQELPECQRTDAVS 99
           SPCA+CK+LRRRC + C+ APYFPP +P KF I H+VFGASN+ K LQELP  QR DAV+
Sbjct: 7   SPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVN 66

Query: 100 SMVYEANARLRDPVYGSAGAICQLQTQVSELQAQLAKARAEVANMQQQ 148
           S+V+EANAR+RDPVYG  GAI  LQ QVS+LQ QLA A+AE+  +Q Q
Sbjct: 67  SLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQ 114

BLAST of Cp4.1LG01g04270 vs. ExPASy Swiss-Prot
Match: Q9SHE9 (LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 2.0e-34
Identity = 74/110 (67.27%), Postives = 86/110 (78.18%), Query Frame = 0

Query: 40  SPCAACKILRRRCIEKCVLAPYFPPTEPLKFTIAHRVFGASNIIKFLQELPECQRTDAVS 99
           SPCAACK+LRRRC + CV +PYFP  EP KF   HRVFGASN+ K LQELP  QR DAVS
Sbjct: 12  SPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGDAVS 71

Query: 100 SMVYEANARLRDPVYGSAGAICQLQTQVSELQAQLAKARAEVANMQQQQA 150
           SMVYEANAR+RDPVYG  GAI  LQ Q+  LQAQLA A+AEV +++ +Q+
Sbjct: 72  SMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHLRVRQS 121

BLAST of Cp4.1LG01g04270 vs. ExPASy Swiss-Prot
Match: Q8L5T5 (LOB domain-containing protein 15 OS=Arabidopsis thaliana OX=3702 GN=LBD15 PE=1 SV=2)

HSP 1 Score: 137.9 bits (346), Expect = 1.2e-31
Identity = 65/111 (58.56%), Postives = 82/111 (73.87%), Query Frame = 0

Query: 39  LSPCAACKILRRRCIEKCVLAPYFPPTEPLKFTIAHRVFGASNIIKFLQELPECQRTDAV 98
           ++PCAACK+LRRRC ++C  +PYF P EP KF   H+VFGASN+ K L E+PE QR DA 
Sbjct: 43  ITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVPESQRADAA 102

Query: 99  SSMVYEANARLRDPVYGSAGAICQLQTQVSELQAQLAKARAEVANMQQQQA 150
           +S+VYEAN RLRDPVYG  GAI  LQ QV  LQA+L   R+E+   +Q++A
Sbjct: 103 NSLVYEANVRLRDPVYGCMGAISALQQQVQALQAELTAVRSEILKYKQREA 153

BLAST of Cp4.1LG01g04270 vs. NCBI nr
Match: XP_023525482.1 (LOB domain-containing protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 372 bits (956), Expect = 8.57e-130
Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 0

Query: 2   SSPPTPTTLPNPPLSSSATNFVSPPTSQQSSTPVAVVLSPCAACKILRRRCIEKCVLAPY 61
           SSPPTPTTLPNPPLSSSATNFVSPPTSQQSSTPVAVVLSPCAACKILRRRCIEKCVLAPY
Sbjct: 9   SSPPTPTTLPNPPLSSSATNFVSPPTSQQSSTPVAVVLSPCAACKILRRRCIEKCVLAPY 68

Query: 62  FPPTEPLKFTIAHRVFGASNIIKFLQELPECQRTDAVSSMVYEANARLRDPVYGSAGAIC 121
           FPPTEPLKFTIAHRVFGASNIIKFLQELPECQRTDAVSSMVYEANARLRDPVYGSAGAIC
Sbjct: 69  FPPTEPLKFTIAHRVFGASNIIKFLQELPECQRTDAVSSMVYEANARLRDPVYGSAGAIC 128

Query: 122 QLQTQVSELQAQLAKARAEVANMQQQQANLLALICMEMKQSAEPIWASHLADTSWFLDDA 181
           QLQTQVSELQAQLAKARAEVANMQQQQANLLALICMEMKQSAEPIWASHLADTSWFLDDA
Sbjct: 129 QLQTQVSELQAQLAKARAEVANMQQQQANLLALICMEMKQSAEPIWASHLADTSWFLDDA 188

Query: 182 TLSAPWEPLWT 192
           TLSAPWEPLWT
Sbjct: 189 TLSAPWEPLWT 199

BLAST of Cp4.1LG01g04270 vs. NCBI nr
Match: KAG6600106.1 (LOB domain-containing protein 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 358 bits (920), Expect = 3.04e-124
Identity = 187/195 (95.90%), Postives = 190/195 (97.44%), Query Frame = 0

Query: 2   SSPPTPTTLPNPPLSSSA----TNFVSPPTSQQSSTPVAVVLSPCAACKILRRRCIEKCV 61
           SSPPTPTTLPNPPLSSSA    TNFVSPPTSQQSSTPVAVVLSPCAACKILRRRCIEKCV
Sbjct: 9   SSPPTPTTLPNPPLSSSAAAAATNFVSPPTSQQSSTPVAVVLSPCAACKILRRRCIEKCV 68

Query: 62  LAPYFPPTEPLKFTIAHRVFGASNIIKFLQELPECQRTDAVSSMVYEANARLRDPVYGSA 121
           LAPYFPPTEPLKFTIAHRVFGASNIIKFLQELPECQRTDAVSSMVYEANAR+RDPVYGSA
Sbjct: 69  LAPYFPPTEPLKFTIAHRVFGASNIIKFLQELPECQRTDAVSSMVYEANARVRDPVYGSA 128

Query: 122 GAICQLQTQVSELQAQLAKARAEVANMQQQQANLLALICMEMKQSAEPIWASHLADTSWF 181
           GAICQLQTQVSELQAQLAKARAEVANMQQQQANLLALICMEMKQSAEP+WASHLADT+ F
Sbjct: 129 GAICQLQTQVSELQAQLAKARAEVANMQQQQANLLALICMEMKQSAEPLWASHLADTTCF 188

Query: 182 LDDATLSAPWEPLWT 192
           LDDATLSAPWEPLWT
Sbjct: 189 LDDATLSAPWEPLWT 203

BLAST of Cp4.1LG01g04270 vs. NCBI nr
Match: XP_022942733.1 (LOB domain-containing protein 1-like [Cucurbita moschata] >KAG7030776.1 LOB domain-containing protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 358 bits (920), Expect = 3.04e-124
Identity = 187/195 (95.90%), Postives = 190/195 (97.44%), Query Frame = 0

Query: 2   SSPPTPTTLPNPPLSSSA----TNFVSPPTSQQSSTPVAVVLSPCAACKILRRRCIEKCV 61
           SSPPTPTTLPNPPLSSSA    TNFVSPPTSQQSSTPVAVVLSPCAACKILRRRCIEKCV
Sbjct: 9   SSPPTPTTLPNPPLSSSAAAATTNFVSPPTSQQSSTPVAVVLSPCAACKILRRRCIEKCV 68

Query: 62  LAPYFPPTEPLKFTIAHRVFGASNIIKFLQELPECQRTDAVSSMVYEANARLRDPVYGSA 121
           LAPYFPPTEPLKFTIAHRVFGASNIIKFLQELPECQRTDAVSSMVYEANAR+RDPVYGSA
Sbjct: 69  LAPYFPPTEPLKFTIAHRVFGASNIIKFLQELPECQRTDAVSSMVYEANARVRDPVYGSA 128

Query: 122 GAICQLQTQVSELQAQLAKARAEVANMQQQQANLLALICMEMKQSAEPIWASHLADTSWF 181
           GAICQLQTQVSELQAQLAKARAEVANMQQQQANLLALICMEMKQSAEP+WASHLADT+ F
Sbjct: 129 GAICQLQTQVSELQAQLAKARAEVANMQQQQANLLALICMEMKQSAEPLWASHLADTTCF 188

Query: 182 LDDATLSAPWEPLWT 192
           LDDATLSAPWEPLWT
Sbjct: 189 LDDATLSAPWEPLWT 203

BLAST of Cp4.1LG01g04270 vs. NCBI nr
Match: XP_022988552.1 (LOB domain-containing protein 1-like [Cucurbita maxima])

HSP 1 Score: 355 bits (912), Expect = 4.37e-123
Identity = 184/191 (96.34%), Postives = 187/191 (97.91%), Query Frame = 0

Query: 2   SSPPTPTTLPNPPLSSSATNFVSPPTSQQSSTPVAVVLSPCAACKILRRRCIEKCVLAPY 61
           SSPPTPTTLPNP  SS+ATNFVSPPTSQQ STPVAVVLSPCAACKILRRRCIEKCVLAPY
Sbjct: 9   SSPPTPTTLPNPLSSSAATNFVSPPTSQQLSTPVAVVLSPCAACKILRRRCIEKCVLAPY 68

Query: 62  FPPTEPLKFTIAHRVFGASNIIKFLQELPECQRTDAVSSMVYEANARLRDPVYGSAGAIC 121
           FPPTEPLKFTIAHRVFGASNIIKFLQELPECQRTDAVSSMVYEANAR+RDPVYGSAGAIC
Sbjct: 69  FPPTEPLKFTIAHRVFGASNIIKFLQELPECQRTDAVSSMVYEANARVRDPVYGSAGAIC 128

Query: 122 QLQTQVSELQAQLAKARAEVANMQQQQANLLALICMEMKQSAEPIWASHLADTSWFLDDA 181
           QLQTQVSELQAQLAKARAEVANMQQQQANLLALICMEMKQSAEPIWASHLADT+ FLDDA
Sbjct: 129 QLQTQVSELQAQLAKARAEVANMQQQQANLLALICMEMKQSAEPIWASHLADTTCFLDDA 188

Query: 182 TLSAPWEPLWT 192
           TLSAPWEPLWT
Sbjct: 189 TLSAPWEPLWT 199

BLAST of Cp4.1LG01g04270 vs. NCBI nr
Match: XP_038892948.1 (LOB domain-containing protein 1-like [Benincasa hispida])

HSP 1 Score: 311 bits (797), Expect = 2.07e-105
Identity = 167/200 (83.50%), Postives = 176/200 (88.00%), Query Frame = 0

Query: 3   SPPTPTTLPN----PPLSSSA-----TNFVSPPTSQQSSTPV-AVVLSPCAACKILRRRC 62
           SPPTP  +PN     P+SSS+     TNF SPPTSQ SS P+ AVVLSPCAACKILRRRC
Sbjct: 10  SPPTPINVPNHLSFSPMSSSSAAATTTNFASPPTSQPSSPPLSAVVLSPCAACKILRRRC 69

Query: 63  IEKCVLAPYFPPTEPLKFTIAHRVFGASNIIKFLQELPECQRTDAVSSMVYEANARLRDP 122
           +EKCVLAPYFPPTEPLKFTIAHRVFGASNIIKFLQELPE QRTDAVSSMVYEANARLRDP
Sbjct: 70  VEKCVLAPYFPPTEPLKFTIAHRVFGASNIIKFLQELPESQRTDAVSSMVYEANARLRDP 129

Query: 123 VYGSAGAICQLQTQVSELQAQLAKARAEVANMQQQQANLLALICMEMKQSAEPIWASHLA 182
           VYGSAGAICQLQ QVSELQAQLAKARAEVANMQQQQANLLALICMEM+QS EP+W   L 
Sbjct: 130 VYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQANLLALICMEMRQSPEPVWPPQLV 189

Query: 183 DTSWFLDDATLSAPWEPLWT 192
           DT+ FLDDATLS+PWEPLWT
Sbjct: 190 DTTCFLDDATLSSPWEPLWT 209

BLAST of Cp4.1LG01g04270 vs. ExPASy TrEMBL
Match: A0A6J1FVK4 (LOB domain-containing protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111447681 PE=3 SV=1)

HSP 1 Score: 358 bits (920), Expect = 1.47e-124
Identity = 187/195 (95.90%), Postives = 190/195 (97.44%), Query Frame = 0

Query: 2   SSPPTPTTLPNPPLSSSA----TNFVSPPTSQQSSTPVAVVLSPCAACKILRRRCIEKCV 61
           SSPPTPTTLPNPPLSSSA    TNFVSPPTSQQSSTPVAVVLSPCAACKILRRRCIEKCV
Sbjct: 9   SSPPTPTTLPNPPLSSSAAAATTNFVSPPTSQQSSTPVAVVLSPCAACKILRRRCIEKCV 68

Query: 62  LAPYFPPTEPLKFTIAHRVFGASNIIKFLQELPECQRTDAVSSMVYEANARLRDPVYGSA 121
           LAPYFPPTEPLKFTIAHRVFGASNIIKFLQELPECQRTDAVSSMVYEANAR+RDPVYGSA
Sbjct: 69  LAPYFPPTEPLKFTIAHRVFGASNIIKFLQELPECQRTDAVSSMVYEANARVRDPVYGSA 128

Query: 122 GAICQLQTQVSELQAQLAKARAEVANMQQQQANLLALICMEMKQSAEPIWASHLADTSWF 181
           GAICQLQTQVSELQAQLAKARAEVANMQQQQANLLALICMEMKQSAEP+WASHLADT+ F
Sbjct: 129 GAICQLQTQVSELQAQLAKARAEVANMQQQQANLLALICMEMKQSAEPLWASHLADTTCF 188

Query: 182 LDDATLSAPWEPLWT 192
           LDDATLSAPWEPLWT
Sbjct: 189 LDDATLSAPWEPLWT 203

BLAST of Cp4.1LG01g04270 vs. ExPASy TrEMBL
Match: A0A6J1JDC2 (LOB domain-containing protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111485758 PE=3 SV=1)

HSP 1 Score: 355 bits (912), Expect = 2.12e-123
Identity = 184/191 (96.34%), Postives = 187/191 (97.91%), Query Frame = 0

Query: 2   SSPPTPTTLPNPPLSSSATNFVSPPTSQQSSTPVAVVLSPCAACKILRRRCIEKCVLAPY 61
           SSPPTPTTLPNP  SS+ATNFVSPPTSQQ STPVAVVLSPCAACKILRRRCIEKCVLAPY
Sbjct: 9   SSPPTPTTLPNPLSSSAATNFVSPPTSQQLSTPVAVVLSPCAACKILRRRCIEKCVLAPY 68

Query: 62  FPPTEPLKFTIAHRVFGASNIIKFLQELPECQRTDAVSSMVYEANARLRDPVYGSAGAIC 121
           FPPTEPLKFTIAHRVFGASNIIKFLQELPECQRTDAVSSMVYEANAR+RDPVYGSAGAIC
Sbjct: 69  FPPTEPLKFTIAHRVFGASNIIKFLQELPECQRTDAVSSMVYEANARVRDPVYGSAGAIC 128

Query: 122 QLQTQVSELQAQLAKARAEVANMQQQQANLLALICMEMKQSAEPIWASHLADTSWFLDDA 181
           QLQTQVSELQAQLAKARAEVANMQQQQANLLALICMEMKQSAEPIWASHLADT+ FLDDA
Sbjct: 129 QLQTQVSELQAQLAKARAEVANMQQQQANLLALICMEMKQSAEPIWASHLADTTCFLDDA 188

Query: 182 TLSAPWEPLWT 192
           TLSAPWEPLWT
Sbjct: 189 TLSAPWEPLWT 199

BLAST of Cp4.1LG01g04270 vs. ExPASy TrEMBL
Match: A0A6J1GZI6 (LOB domain-containing protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111458656 PE=3 SV=1)

HSP 1 Score: 304 bits (779), Expect = 5.35e-103
Identity = 161/198 (81.31%), Postives = 170/198 (85.86%), Query Frame = 0

Query: 4   PPTPTTLPNPPLSSS--------ATNFVSPPTSQQSSTPV-AVVLSPCAACKILRRRCIE 63
           P TP T+PN PLS S         TNF SPPTSQ SS P   V+LSPCAACKILRRRC+E
Sbjct: 11  PSTPITVPNHPLSYSPISSSSAATTNFGSPPTSQPSSPPPPTVILSPCAACKILRRRCVE 70

Query: 64  KCVLAPYFPPTEPLKFTIAHRVFGASNIIKFLQELPECQRTDAVSSMVYEANARLRDPVY 123
           KCVLAPYFPP+EPLKFTIAHRVFGASNIIKFLQELPECQRTDAVSSMVYEANARLRDPVY
Sbjct: 71  KCVLAPYFPPSEPLKFTIAHRVFGASNIIKFLQELPECQRTDAVSSMVYEANARLRDPVY 130

Query: 124 GSAGAICQLQTQVSELQAQLAKARAEVANMQQQQANLLALICMEMKQSAEPIWASHLADT 183
           GSAGAICQLQ QVSELQAQLAKARAEVANMQ QQANLLALICMEM+QS +P+W   L DT
Sbjct: 131 GSAGAICQLQKQVSELQAQLAKARAEVANMQHQQANLLALICMEMRQSPDPVWPPQLVDT 190

Query: 184 SWFLDDATLSAPWEPLWT 192
           + FLDDA LS+PWEPLWT
Sbjct: 191 TCFLDDAALSSPWEPLWT 208

BLAST of Cp4.1LG01g04270 vs. ExPASy TrEMBL
Match: A0A1S3BDP1 (LOB domain-containing protein 1-like OS=Cucumis melo OX=3656 GN=LOC103488750 PE=3 SV=1)

HSP 1 Score: 303 bits (775), Expect = 1.83e-102
Identity = 163/194 (84.02%), Postives = 171/194 (88.14%), Query Frame = 0

Query: 3   SPPTPTTL---PNPPLSSSATNFVSPPTSQQSSTPVA-VVLSPCAACKILRRRCIEKCVL 62
           SPPTP +    PN PLS S  +  SPPTSQ SS P   VVLSPCAACKILRRRC+EKCVL
Sbjct: 11  SPPTPISFNNNPNNPLSFSPMSS-SPPTSQPSSPPPPPVVLSPCAACKILRRRCVEKCVL 70

Query: 63  APYFPPTEPLKFTIAHRVFGASNIIKFLQELPECQRTDAVSSMVYEANARLRDPVYGSAG 122
           APYFPPT+PLKFTIAHRVFGASNIIKFLQELPECQRTDAVSSMVYEANARLRDPVYGSAG
Sbjct: 71  APYFPPTDPLKFTIAHRVFGASNIIKFLQELPECQRTDAVSSMVYEANARLRDPVYGSAG 130

Query: 123 AICQLQTQVSELQAQLAKARAEVANMQQQQANLLALICMEMKQSAEPIWASHLADTSWFL 182
           AICQLQ QVSELQAQLAKARAEVANMQQQQANLLALICMEM+QS EP+W   L DT+ FL
Sbjct: 131 AICQLQKQVSELQAQLAKARAEVANMQQQQANLLALICMEMRQSPEPVWQPQLVDTTCFL 190

Query: 183 DDATLSAPWEPLWT 192
           DDATLS+PWEPLWT
Sbjct: 191 DDATLSSPWEPLWT 203

BLAST of Cp4.1LG01g04270 vs. ExPASy TrEMBL
Match: A0A0A0KNK9 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G175870 PE=3 SV=1)

HSP 1 Score: 300 bits (768), Expect = 7.55e-102
Identity = 153/170 (90.00%), Postives = 159/170 (93.53%), Query Frame = 0

Query: 24  SPPTSQQSSTPV-AVVLSPCAACKILRRRCIEKCVLAPYFPPTEPLKFTIAHRVFGASNI 83
           SPPTSQ SS P  AVVLSPCAACKILRRRC+EKCVLAPYFPPT+PLKFTIAHRVFGASNI
Sbjct: 4   SPPTSQPSSPPPPAVVLSPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNI 63

Query: 84  IKFLQELPECQRTDAVSSMVYEANARLRDPVYGSAGAICQLQTQVSELQAQLAKARAEVA 143
           IKFLQELPECQRTDAVSSMVYEANARLRDPVYGSAGAICQLQ QVSELQAQLAKARAEVA
Sbjct: 64  IKFLQELPECQRTDAVSSMVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVA 123

Query: 144 NMQQQQANLLALICMEMKQSAEPIWASHLADTSWFLDDATLSAPWEPLWT 192
           NMQQQQANLLALICMEM+QS EP+W   L DT+ FLDDATLS+PWEPLWT
Sbjct: 124 NMQQQQANLLALICMEMRQSPEPVWQPQLVDTTCFLDDATLSSPWEPLWT 173

BLAST of Cp4.1LG01g04270 vs. TAIR 10
Match: AT1G07900.1 (LOB domain-containing protein 1 )

HSP 1 Score: 206.1 bits (523), Expect = 2.6e-53
Identity = 116/182 (63.74%), Postives = 135/182 (74.18%), Query Frame = 0

Query: 16  SSSATNFVSPPTSQQSSTPVAVVLSPCAACKILRRRCIEKCVLAPYFPPTEPLKFTIAHR 75
           S + T  +S  +S   S    VVLSPCAACKILRRRC E+CVLAPYFPPT+P KFTIAHR
Sbjct: 8   SVATTPIISSSSSPPPSLSPRVVLSPCAACKILRRRCAERCVLAPYFPPTDPAKFTIAHR 67

Query: 76  VFGASNIIKFLQELPECQRTDAVSSMVYEANARLRDPVYGSAGAICQLQTQVSELQAQLA 135
           VFGASNIIKFLQELPE QRTDAV+SMVYEA AR+RDPVYG AGAI  LQ QVSELQAQLA
Sbjct: 68  VFGASNIIKFLQELPESQRTDAVNSMVYEAEARIRDPVYGCAGAIYHLQRQVSELQAQLA 127

Query: 136 KARAEVANMQQQQANLLALIC-MEMKQSAEPIWASHLADTSWFLDDATLSAP----WEPL 193
           KA+ E+ NMQ Q++NLL LI  M+ +Q  E    S  ++   FL+D + +      W+PL
Sbjct: 128 KAQVEMVNMQFQRSNLLELIYNMDQQQKQEQDNMSFESNDLGFLEDKSNTNSSMLWWDPL 187

BLAST of Cp4.1LG01g04270 vs. TAIR 10
Match: AT2G28500.1 (LOB domain-containing protein 11 )

HSP 1 Score: 193.0 bits (489), Expect = 2.3e-49
Identity = 116/211 (54.98%), Postives = 136/211 (64.45%), Query Frame = 0

Query: 8   TTLPNPPLSSSATNFVSPPTSQQSSTPVAVVLSPCAACKILRRRCIEKCVLAPYFPPTEP 67
           T    P  S S T+   PP S Q      VVLSPCAACKILRRRC +KCVLAPYFPPT+P
Sbjct: 22  TETTTPVNSPSPTSSPPPPPSPQQPPQPPVVLSPCAACKILRRRCADKCVLAPYFPPTDP 81

Query: 68  LKFTIAHRVFGASNIIKFLQELPECQRTDAVSSMVYEANARLRDPVYGSAGAICQLQTQV 127
            KFTIAHRVFGASNIIKFLQELPE QRTDAV+SMVYEA AR+RDPVYG AGAI  LQ QV
Sbjct: 82  AKFTIAHRVFGASNIIKFLQELPESQRTDAVNSMVYEAGARMRDPVYGCAGAIYHLQRQV 141

Query: 128 SELQAQLAKARAEVANMQQQQANLLALI--CMEMKQSAEPIWASHLA-DTSWFLDDATLS 187
           SELQAQLAK + E+  MQ Q+++LL LI    + K S +      ++ ++S+   D  +S
Sbjct: 142 SELQAQLAKTQVELVGMQLQRSSLLELIYNMEQTKLSVQEQGQQKMSFESSFESGDEFIS 201

Query: 188 AP-----------------------WEPLWT 193
           +P                       W+PLWT
Sbjct: 202 SPDEESNDLGFLEDNNNNNNSSMSWWDPLWT 232

BLAST of Cp4.1LG01g04270 vs. TAIR 10
Match: AT2G30130.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 147.9 bits (372), Expect = 8.3e-36
Identity = 71/108 (65.74%), Postives = 86/108 (79.63%), Query Frame = 0

Query: 40  SPCAACKILRRRCIEKCVLAPYFPPTEPLKFTIAHRVFGASNIIKFLQELPECQRTDAVS 99
           SPCA+CK+LRRRC + C+ APYFPP +P KF I H+VFGASN+ K LQELP  QR DAV+
Sbjct: 7   SPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVN 66

Query: 100 SMVYEANARLRDPVYGSAGAICQLQTQVSELQAQLAKARAEVANMQQQ 148
           S+V+EANAR+RDPVYG  GAI  LQ QVS+LQ QLA A+AE+  +Q Q
Sbjct: 67  SLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQ 114

BLAST of Cp4.1LG01g04270 vs. TAIR 10
Match: AT1G31320.1 (LOB domain-containing protein 4 )

HSP 1 Score: 147.1 bits (370), Expect = 1.4e-35
Identity = 74/110 (67.27%), Postives = 86/110 (78.18%), Query Frame = 0

Query: 40  SPCAACKILRRRCIEKCVLAPYFPPTEPLKFTIAHRVFGASNIIKFLQELPECQRTDAVS 99
           SPCAACK+LRRRC + CV +PYFP  EP KF   HRVFGASN+ K LQELP  QR DAVS
Sbjct: 12  SPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGDAVS 71

Query: 100 SMVYEANARLRDPVYGSAGAICQLQTQVSELQAQLAKARAEVANMQQQQA 150
           SMVYEANAR+RDPVYG  GAI  LQ Q+  LQAQLA A+AEV +++ +Q+
Sbjct: 72  SMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHLRVRQS 121

BLAST of Cp4.1LG01g04270 vs. TAIR 10
Match: AT2G40470.1 (LOB domain-containing protein 15 )

HSP 1 Score: 137.9 bits (346), Expect = 8.6e-33
Identity = 65/111 (58.56%), Postives = 82/111 (73.87%), Query Frame = 0

Query: 39  LSPCAACKILRRRCIEKCVLAPYFPPTEPLKFTIAHRVFGASNIIKFLQELPECQRTDAV 98
           ++PCAACK+LRRRC ++C  +PYF P EP KF   H+VFGASN+ K L E+PE QR DA 
Sbjct: 43  ITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVPESQRADAA 102

Query: 99  SSMVYEANARLRDPVYGSAGAICQLQTQVSELQAQLAKARAEVANMQQQQA 150
           +S+VYEAN RLRDPVYG  GAI  LQ QV  LQA+L   R+E+   +Q++A
Sbjct: 103 NSLVYEANVRLRDPVYGCMGAISALQQQVQALQAELTAVRSEILKYKQREA 153

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9LQR03.6e-5263.74LOB domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=LBD1 PE=2 SV=... [more]
Q9SK083.2e-4854.98LOB domain-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=LBD11 PE=2 S... [more]
Q8LBW31.2e-3465.74LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 S... [more]
Q9SHE92.0e-3467.27LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=... [more]
Q8L5T51.2e-3158.56LOB domain-containing protein 15 OS=Arabidopsis thaliana OX=3702 GN=LBD15 PE=1 S... [more]
Match NameE-valueIdentityDescription
XP_023525482.18.57e-130100.00LOB domain-containing protein 1-like [Cucurbita pepo subsp. pepo][more]
KAG6600106.13.04e-12495.90LOB domain-containing protein 1, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_022942733.13.04e-12495.90LOB domain-containing protein 1-like [Cucurbita moschata] >KAG7030776.1 LOB doma... [more]
XP_022988552.14.37e-12396.34LOB domain-containing protein 1-like [Cucurbita maxima][more]
XP_038892948.12.07e-10583.50LOB domain-containing protein 1-like [Benincasa hispida][more]
Match NameE-valueIdentityDescription
A0A6J1FVK41.47e-12495.90LOB domain-containing protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC1114476... [more]
A0A6J1JDC22.12e-12396.34LOB domain-containing protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111485758... [more]
A0A6J1GZI65.35e-10381.31LOB domain-containing protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC1114586... [more]
A0A1S3BDP11.83e-10284.02LOB domain-containing protein 1-like OS=Cucumis melo OX=3656 GN=LOC103488750 PE=... [more]
A0A0A0KNK97.55e-10290.00LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G175870 PE=3 SV... [more]
Match NameE-valueIdentityDescription
AT1G07900.12.6e-5363.74LOB domain-containing protein 1 [more]
AT2G28500.12.3e-4954.98LOB domain-containing protein 11 [more]
AT2G30130.18.3e-3665.74Lateral organ boundaries (LOB) domain family protein [more]
AT1G31320.11.4e-3567.27LOB domain-containing protein 4 [more]
AT2G40470.18.6e-3358.56LOB domain-containing protein 15 [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 120..154
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 13..32
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..32
NoneNo IPR availablePANTHERPTHR31301LOB DOMAIN-CONTAINING PROTEIN 4-RELATEDcoord: 30..167
NoneNo IPR availablePANTHERPTHR31301:SF137LOB DOMAIN-CONTAINING PROTEIN 1coord: 30..167
IPR004883Lateral organ boundaries, LOBPFAMPF03195LOBcoord: 41..138
e-value: 2.0E-39
score: 134.1
IPR004883Lateral organ boundaries, LOBPROSITEPS50891LOBcoord: 40..141
score: 25.472681

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g04270.1Cp4.1LG01g04270.1mRNA