Cp4.1LG01g02630 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG01g02630
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	pre-mRNA-splicing factor CWC25-like isoform X2
Location	Cp4.1LG01: 2326863 .. 2332476 (+)
RNA-Seq Expression	Cp4.1LG01g02630
Synteny	Cp4.1LG01g02630

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGAGGATTACTTGCGATATCATCATCACTTCTCCAGATTCCCGCGAGACGAAGCCCTAACTTCCCATTCTCTCTGTGTTTCACTTTCTTGCTCCATTTTCTTTGACATAATCAAGAGCGGGAAAGCAAATGTCACGCCGTGAAGCTCGGGAATCCGACTCCAAGCGCTACCGTTCCAGATTCGATAGAGAACCCAGGTACCCTCCTCATACCCTTTTCCGATTGCATCCCCTCCTCCTCATCTATAAGAATTTGTTCGGTTTAAATGGATTGTCGTTGTGTCTGCTTCAGTTTAGATTCTGGAATTTCCATGATTTTCCCCCAATTTGATTGAGTGACGTCGCGTGTGGTTTAGTTTGTTTGATGGTATCTTGATGGGAAGGAACACTGTGCATTTGGCGTTCTTATTCATATTCGATTATGGCTCTTTCATTTTTGTTTGGAACGTAAATTTGTTCAATTTGATTTGTCTATTGTTACAGTGTCGATTGATATGATATGTTTAAATGGGTCTCGGGGAATTGGGTTTTATGGAGCTCGTGTATGATAGGATGATCTAGTTTATTAATTTTGGAGATCTTTTTTTTTGGAAGATGGAATAGAAATTAACTCATTCCCTCCTTATGTTGGTTGTACTGTCTTTAAGCCTTGCTCCGCTATTTTCTCACTAATGACGTGAGAGGTGGTTTTATTTGTTTAACGAAGTTTGTAAATTTGAGCTGTAAATAGTATTAGTTCAGTATTTCTTTTGTATGGAAGGACGAACTAGTTCATTTATGCTCCATTGTTTTTCACTCTAATGATGTGAGGTTATTCATAAACAAAACTGTAAAAGTGAGATTGGAAATTGTATTTTGAAAGATTAATGTTTGTTCTTAGATAGGAAGCATGGACACATGTTTGACATGGATATGTATTGACATGTGATGGACATTTATCCGACACACCAAATTCTAGAGTGTGTGTATATATATATCTATATATATTATTGTCAACTGACCTGGCCTTTTGTGTTCTTGATGAAACATATTTTTGTTTTTTTGAATGTCAACTTTGTGTTTTTATCTAGTTTGAAATATTAAATATACCAATATGTACACATCTTCTATAAGAAAAAATGTGATGCACCCATGTCATAGTGTATAGAAATTAATGTGTTGCTGTGTTCGTATCATCTCTTTTGTTGTATCTATGCCCCTTTGTCTGCATTTGTGCTTGTGAAGTTCATAGGTGTGAATGGGTAAGTATCTACATTGGTGGTCACTGGTGAAAGCTCCTTATATATTGTTTTTTTATATTACCTTGTTTATTTCCATGTTATGCACTCGAGTGCTCACATGTCTTTTGAAGTGCTTGGACTCTGAAGTGTATGCTAATGTGTAGTCGAAGTGGTTGATGGTTGAATGTTGATTGTTGGATGCTGAATGTTGAATGTATGAGTGAAAATTGTAGTTTGCCAATCAATTTAGAACACACATTTCTTTTATAGATTCTTTTAGTTGATTGAATGAGCATTCAGTGGAGAGGACCTGCGTATTCTTAGAAAAAGGTTGCTTGCATATATGTATATTTCTAGCTCCAAGCTACGAAGAACATATATTTTGATTGTTACCAAAGAAATGATCGGACAATTGCTTTGGCAATGCTCAGTCTGGTAGTTGCTTATGTGTATTAGTTCTAGTTTCAAATTAATTCATGGTTTTTTATGGCTAGTTGGTAGTATGTCGTTGTTATCAGCCCTGCATCATGCCAATTAAATTTCCCCAGTTCCAAAATGGCCAAAACAAATATTTCGAAGTCAAAAGTGAGGGCTCTGAAGCTCCTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTTCATATTTAATTCAAAATAATACTTCAGATTGAATAAGGGATTAATGCATGTAAGTACCATCTGATACCTAATCATGGAACTCTAATATGACTTAAATATGTTATTTGTTGTTACTAGTCCAAAGAGGTCAAGGAGGGACAGGAAGCCATTAGAGGAGAAGTTATCTAGAAACTCTAGTTCTCATGTTGAAGATAATAAAGATCGGGATCAGAAACATGAGCTGCGACATGAGGGACAAGATGTGACACCCCATGAGTCTTCATTAGCACTTGATTCTCATCCAGAAGGTGGGGTTAGCAAAGGAGCAAACAGGAACAGTGATGAGAGAGAGGGAGGGACTAAACGTTCATTGAATCCCACTGAAGTACCACGATCACGATCTTATTTTCAGGTTTGTGCTACATTAATTTTCAATTAATTTTGATAATTTCTTTCTTATTTAGTTTTAAAAATAAAATTAGCATGATTCTAATTTGGTTTCAGTCGATGTTGTTTTGAAGTGAAATAAGGGTTTTTTTAGAAGAGATTGTTTAAGGTAGACATCCCCCCAGAGCATTTTCTTCCTTAATAAAATAAAGCCTAAGGCATGCACTTTGATGTGGGTCGCCTCAGTAAGGTGCAAGGCGAGATGCTTCAGCGACACTCTTCACACTTTTTAAAACTATGTTGTAGCATGTTTTTATGGCTTTCGAAGGATGTTTGTCGGGTCAAACAAATATTAATATATTCTTTTGCTATCTTATATTTACATAGCTGTGGAATTTCCCCATCCATATCGATAACATTAAATAGCTTAGCAAGTAATAATTCTCTATTTCTCTCTCCTCCCTTCTCCTGCCTTTTCCGTTCTTTGTTGTAATTTAGCTTACCCAACATTTTTGCCGGGCTGATGTAATTGGAATCTTGTTCAGCCCTGTGCCTTCAAGTGCATCCGTGTATATAACTTCTTAGGCTTGCCTGTGCATGTCTTATAACAGCACGACAAACGTGGTAGTGCCGGGCAAGTTGGTCGAAGCTTTGGTCGGAGTTCATCTAGTGGTGGGTTTCTTTACTCCCTTTTAAGCCCAAATTTCAACTTATTTCGAGTTCTTTTCATTATTTTTTCTCTTGTGCAACGGTCGTGTTTATATTATAACACTGTTTTAGTATATTCCTCAGAACATTACTAATCATAGCAATTAAGCATGTTTTATTATTCTTATTATATCGACCCTCTTAAATAGATACTATTGTTTTTGTAGTAAATGCATTTACCCTTTTGTTCCCTCGCACTCATGGATCAGTGGTAATATAGGCATTGGCATGTCAACACAATTCTAGTGTCAAATTTAAATTTAGGGAGAGAAACTAGTGCAGTTTTGATATGGTGTTCTTTTGCCTTTCATCTTAAATGGAGGATGCGTTTTTATTTTTTAACTGTTGCCCAAATGTTATATATACAATCTTTTAGAGGTTACGTTTCTTTCTTCTGGACCTGTATAATGACAGTGTCTTGCATGGGAAAATTTAGAACATCTCTTCAACCTTTTTATTCTTGCTTCTCCTCTCATGATTTAGCATCTTTTTTTTCCTTTTTAGGGCGGGGTTGGTGGAAGGATTCAAAGGAACAGGATAAGAATAGTGACAGGGCATCTGGAAAGACAGCAACTTACAATTCACAGCGAAGAGATGAGATACCACAAACCGTGAAAGAGGATAATCACACAAGGACTCGTGACGGGTCCTCAAAACTGGAGGTTGATTCATCAGCTCCTGCTCGGAAAAGGCCTGCATTTAGGGAGAAGAAGATTACACCCGACAATGAAAATTTTGAGAAAGCAGGTATGGCATCAGAGAGTAAGAAACTGAGTGATCCACACCAGCCTCAGGATGGAAGAGAGCGGAGAGAAGAAAGAGGCCGTGACACCCGTTACTCCGATAAACTTAGTAAGCACGTTACTGGAGATATGGCTTCCAAAAGGGATGAGATGAAGAGAGGAGGGTACTCGGTGAGAGAAAGGTATGGCAATGGAGGTGGTGGTGGGAATTACAGGGGAAGAGACAGATTTGGTGGGAGGCAAGGATATCCAGCCAGTGGTGGTACCCGTGTAGAGAAATGGAAGCACGATCTGTTTCACGAGGCTAACCGGAGTCCAACCCCGAAGAACGAAGAGGACCAAATCGCCAAGGTTGAAGCTCTTCTTGCTTCATAGGGTATGGAATAATTAGATGCCATCTGATTTTGTTGAGTCTTTAGTGAATATGGTTTGACGAAAATATTGAAGCATTTGAAATGATGTAGCTTGTGTTCTCCTAAAACATCCTCTCCCGTTTGTTCTCCTGCTTCTTCTTGTTTGTCACAACTCAATGTAATTGAATTGCCTGATTCTGTTCGACCCAAACTACTGCATTTCATAAGAACCTATCTCATTCGAGGTTCAGTTGTCGATCTTGAAACTCAATATTATGTGGTAAATCGATCTTATTTCCATGGTGCAGGTGAAAAAACTAGACTGGAAAGCTGTAGTAGGCATTGATAATAACATGCGAATTGGAGCGCTGATAAGTTACGGTGGCTTATTTCGGGAACGTTTCGGTCAAATATTGTAGGGTCAAACGATTGTCTTGTAAACCTCCTCGTGTCACAATTACTAAGACTCTAGAGAATTATTAAATTTAGAGACATTATTGGAGAAAGTTGTTGGTACATTGAATCAAAGTCACATTTGGTAATATTAAATAAGTTGTCCTCGATCTATGAATGTCAAACAAGATGGGTATGAATATGGATGAAATTCATTGATTGGCGGCTTAAATCTGCTATAAATAAAGCCATGGAAAAGCAAGTAGAACTCGAAAAAGAGAGAAATGGAGACGAAAAGGGTGGTGGGTTTTGTGGCAATGGTGGTTTTGATGGTGGTTATAGCTCAATCCGCCACCGTGGGCGCCGCCGGGGATGAGGCGATTCAGCTGTCGTCATCAACTCCGATTACCTGTCCTGCTACGTTTGTGCCATGTAAAACTGACTCCATCTGCTCTCCATGCTTCTGTGTCAATGGCTCCTGCGTTGAAAACAGAGGAACATGAACAATCAAACATGTTCCCATGGATGGATGATGATCTCTTCAGCTATGGAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNTCTCTCTCTCTCTCTCCCCCTTATTAATTAATGTGAGGCTATTAAATGATAAGACTCCAAAGTCAATATTGGTTGGTTTGACTTTTTAATTCTAAGAACAATTATGAACACATTTTGGAAAATATTGGACAACGAGATGGGAATGCAAAATGATTCACGACACTCAAAATAGATACCCGACAAGAATGTATAGTTTCTTACTAAGGAAAAAAATCAAGTGAATAACTCAAAACCGCTCGTGATGTAATATCTTAACAACGTAACAGGCAAAAACGCGTTTGCGGTGGGTTTGGACTGTTAGAAATAAAGTTGGAGGACTTCTTGTTGTCACAAAATCGTAAGACTGATGGCAATACATAATGGATCAAAGCAGACAATATTTGCCAGCGGTGGGCTAGAGTCTTGTTACAAATATGGTTGAAAGATTCCATGTTGTCACATGCTCAAAAAACTGCTTCAGCACAACGCTCACCTGTTGTCAATGACCATGATGAGCAACGACCAACAAATTAGAAAATAGAGAGAGAAAACGACGAGAGCTAAAAGACATTGGGAAGGTTTCTTTAGAACAATTTTGTCGACCTCAAATGAGGCGTC

mRNA sequence

TGAGGATTACTTGCGATATCATCATCACTTCTCCAGATTCCCGCGAGACGAAGCCCTAACTTCCCATTCTCTCTGTGTTTCACTTTCTTGCTCCATTTTCTTTGACATAATCAAGAGCGGGAAAGCAAATGTCACGCCGTGAAGCTCGGGAATCCGACTCCAAGCGCTACCGTTCCAGATTCGATAGAGAACCCAGTCCAAAGAGGTCAAGGAGGGACAGGAAGCCATTAGAGGAGAAGTTATCTAGAAACTCTAGTTCTCATGTTGAAGATAATAAAGATCGGGATCAGAAACATGAGCTGCGACATGAGGGACAAGATGTGACACCCCATGAGTCTTCATTAGCACTTGATTCTCATCCAGAAGGTGGGGTTAGCAAAGGAGCAAACAGGAACAGTGATGAGAGAGAGGGAGGGACTAAACGTTCATTGAATCCCACTGAAGTACCACGATCACGATCTTATTTTCAGCACGACAAACGTGGTAGTGCCGGGCAAGTTGGTCGAAGCTTTGGTCGGAGTTCATCTAGTGGGCGGGGTTGGTGGAAGGATTCAAAGGAACAGGATAAGAATAGTGACAGGGCATCTGGAAAGACAGCAACTTACAATTCACAGCGAAGAGATGAGATACCACAAACCGTGAAAGAGGATAATCACACAAGGACTCGTGACGGGTCCTCAAAACTGGAGGTTGATTCATCAGCTCCTGCTCGGAAAAGGCCTGCATTTAGGGAGAAGAAGATTACACCCGACAATGAAAATTTTGAGAAAGCAGGTATGGCATCAGAGAGTAAGAAACTGAGTGATCCACACCAGCCTCAGGATGGAAGAGAGCGGAGAGAAGAAAGAGGCCGTGACACCCGTTACTCCGATAAACTTAGTAAGCACGTTACTGGAGATATGGCTTCCAAAAGGGATGAGATGAAGAGAGGAGGGTACTCGGTGAGAGAAAGGTATGGCAATGGAGGTGGTGGTGGGAATTACAGGGGAAGAGACAGATTTGGTGGGAGGCAAGGATATCCAGCCAGTGGTGGTACCCGTGTAGAGAAATGGAAGCACGATCTGTTTCACGAGGCTAACCGGAGTCCAACCCCGAAGAACGAAGAGGACCAAATCGCCAAGGTTGAAGCTCTTCTTGCTTCATAGGGTGAAAAAACTAGACTGGAAAGCTGTAGTAGGCATTGATAATAACATGCGAATTGGAGCGCTGATAAGTTACGGTGGCTTATTTCGGGAACGTTTCGGTCAAATATTGTAGGGTCAAACGATTGTCTTGTAAACCTCCTCGTGTCACAATTACTAAGACTCTAGAGAATTATTAAATTTAGAGACATTATTGGAGAAAGTTGTTGGTACATTGAATCAAAGTCACATTTGGTAATATTAAATAAGTTGTCCTCGATCTATGAATGTCAAACAAGATGGGTATGAATATGGATGAAATTCATTGATTGGCGGCTTAAATCTGCTATAAATAAAGCCATGGAAAAGCAAGTAGAACTCGAAAAAGAGAGAAATGGAGACGAAAAGGGTGGTGGGTTTTGTGGCAATGGTGGTTTTGATGGTGGTTATAGCTCAATCCGCCACCGTGGGCGCCGCCGGGGATGAGGCGATTCAGCTGTCGTCATCAACTCCGATTACCTGTCCTGCTACGTTTGTGCCATGTAAAACTGACTCCATCTGCTCTCCATGCTTCTGTGTCAATGGCTCCTGCGTTGAAAACAGAGGAACATGAACAATCAAACATGTTCCCATGGATGGATGATGATCTCTTCAGCTATGGAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNTCTCTCTCTCTCTCTCCCCCTTATTAATTAATGTGAGGCTATTAAATGATAAGACTCCAAAGTCAATATTGGTTGGTTTGACTTTTTAATTCTAAGAACAATTATGAACACATTTTGGAAAATATTGGACAACGAGATGGGAATGCAAAATGATTCACGACACTCAAAATAGATACCCGACAAGAATGTATAGTTTCTTACTAAGGAAAAAAATCAAGTGAATAACTCAAAACCGCTCGTGATGTAATATCTTAACAACGTAACAGGCAAAAACGCGTTTGCGGTGGGTTTGGACTGTTAGAAATAAAGTTGGAGGACTTCTTGTTGTCACAAAATCGTAAGACTGATGGCAATACATAATGGATCAAAGCAGACAATATTTGCCAGCGGTGGGCTAGAGTCTTGTTACAAATATGGTTGAAAGATTCCATGTTGTCACATGCTCAAAAAACTGCTTCAGCACAACGCTCACCTGTTGTCAATGACCATGATGAGCAACGACCAACAAATTAGAAAATAGAGAGAGAAAACGACGAGAGCTAAAAGACATTGGGAAGGTTTCTTTAGAACAATTTTGTCGACCTCAAATGAGGCGTC

Coding sequence (CDS)

ATGTCACGCCGTGAAGCTCGGGAATCCGACTCCAAGCGCTACCGTTCCAGATTCGATAGAGAACCCAGTCCAAAGAGGTCAAGGAGGGACAGGAAGCCATTAGAGGAGAAGTTATCTAGAAACTCTAGTTCTCATGTTGAAGATAATAAAGATCGGGATCAGAAACATGAGCTGCGACATGAGGGACAAGATGTGACACCCCATGAGTCTTCATTAGCACTTGATTCTCATCCAGAAGGTGGGGTTAGCAAAGGAGCAAACAGGAACAGTGATGAGAGAGAGGGAGGGACTAAACGTTCATTGAATCCCACTGAAGTACCACGATCACGATCTTATTTTCAGCACGACAAACGTGGTAGTGCCGGGCAAGTTGGTCGAAGCTTTGGTCGGAGTTCATCTAGTGGGCGGGGTTGGTGGAAGGATTCAAAGGAACAGGATAAGAATAGTGACAGGGCATCTGGAAAGACAGCAACTTACAATTCACAGCGAAGAGATGAGATACCACAAACCGTGAAAGAGGATAATCACACAAGGACTCGTGACGGGTCCTCAAAACTGGAGGTTGATTCATCAGCTCCTGCTCGGAAAAGGCCTGCATTTAGGGAGAAGAAGATTACACCCGACAATGAAAATTTTGAGAAAGCAGGTATGGCATCAGAGAGTAAGAAACTGAGTGATCCACACCAGCCTCAGGATGGAAGAGAGCGGAGAGAAGAAAGAGGCCGTGACACCCGTTACTCCGATAAACTTAGTAAGCACGTTACTGGAGATATGGCTTCCAAAAGGGATGAGATGAAGAGAGGAGGGTACTCGGTGAGAGAAAGGTATGGCAATGGAGGTGGTGGTGGGAATTACAGGGGAAGAGACAGATTTGGTGGGAGGCAAGGATATCCAGCCAGTGGTGGTACCCGTGTAGAGAAATGGAAGCACGATCTGTTTCACGAGGCTAACCGGAGTCCAACCCCGAAGAACGAAGAGGACCAAATCGCCAAGGTTGAAGCTCTTCTTGCTTCATAG

Protein sequence

MSRREARESDSKRYRSRFDREPSPKRSRRDRKPLEEKLSRNSSSHVEDNKDRDQKHELRHEGQDVTPHESSLALDSHPEGGVSKGANRNSDEREGGTKRSLNPTEVPRSRSYFQHDKRGSAGQVGRSFGRSSSSGRGWWKDSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRTRDGSSKLEVDSSAPARKRPAFREKKITPDNENFEKAGMASESKKLSDPHQPQDGRERREERGRDTRYSDKLSKHVTGDMASKRDEMKRGGYSVRERYGNGGGGGNYRGRDRFGGRQGYPASGGTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLAS

Homology

[Close]

BLAST of Cp4.1LG01g02630 vs. NCBI nr
Match: XP_023548006.1 (pre-mRNA-splicing factor CWC25-like [Cucurbita pepo subsp. pepo] >XP_023548014.1 pre-mRNA-splicing factor CWC25-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 639 bits (1648), Expect = 1.67e-230
Identity = 338/338 (100.00%), Postives = 338/338 (100.00%), Query Frame = 0


Query: 1   MSRREARESDSKRYRSRFDREPSPKRSRRDRKPLEEKLSRNSSSHVEDNKDRDQKHELRH 60
           MSRREARESDSKRYRSRFDREPSPKRSRRDRKPLEEKLSRNSSSHVEDNKDRDQKHELRH
Sbjct: 1   MSRREARESDSKRYRSRFDREPSPKRSRRDRKPLEEKLSRNSSSHVEDNKDRDQKHELRH 60

Query: 61  EGQDVTPHESSLALDSHPEGGVSKGANRNSDEREGGTKRSLNPTEVPRSRSYFQHDKRGS 120
           EGQDVTPHESSLALDSHPEGGVSKGANRNSDEREGGTKRSLNPTEVPRSRSYFQHDKRGS
Sbjct: 61  EGQDVTPHESSLALDSHPEGGVSKGANRNSDEREGGTKRSLNPTEVPRSRSYFQHDKRGS 120

Query: 121 AGQVGRSFGRSSSSGRGWWKDSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRTR 180
           AGQVGRSFGRSSSSGRGWWKDSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRTR
Sbjct: 121 AGQVGRSFGRSSSSGRGWWKDSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRTR 180

Query: 181 DGSSKLEVDSSAPARKRPAFREKKITPDNENFEKAGMASESKKLSDPHQPQDGRERREER 240
           DGSSKLEVDSSAPARKRPAFREKKITPDNENFEKAGMASESKKLSDPHQPQDGRERREER
Sbjct: 181 DGSSKLEVDSSAPARKRPAFREKKITPDNENFEKAGMASESKKLSDPHQPQDGRERREER 240

Query: 241 GRDTRYSDKLSKHVTGDMASKRDEMKRGGYSVRERYGNGGGGGNYRGRDRFGGRQGYPAS 300
           GRDTRYSDKLSKHVTGDMASKRDEMKRGGYSVRERYGNGGGGGNYRGRDRFGGRQGYPAS
Sbjct: 241 GRDTRYSDKLSKHVTGDMASKRDEMKRGGYSVRERYGNGGGGGNYRGRDRFGGRQGYPAS 300

Query: 301 GGTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLAS 338
           GGTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLAS
Sbjct: 301 GGTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLAS 338

[Close]

BLAST of Cp4.1LG01g02630 vs. NCBI nr
Match: XP_022942670.1 (pre-mRNA-splicing factor CWC25-like isoform X1 [Cucurbita moschata] >XP_022942671.1 pre-mRNA-splicing factor CWC25-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 634 bits (1634), Expect = 2.27e-228
Identity = 335/338 (99.11%), Postives = 336/338 (99.41%), Query Frame = 0


Query: 1   MSRREARESDSKRYRSRFDREPSPKRSRRDRKPLEEKLSRNSSSHVEDNKDRDQKHELRH 60
           MSRREARESDSKRYRSRFD+EPSPKRSRRDRKPLEEKLSRNSSSHVEDNKDRDQKHELRH
Sbjct: 1   MSRREARESDSKRYRSRFDKEPSPKRSRRDRKPLEEKLSRNSSSHVEDNKDRDQKHELRH 60

Query: 61  EGQDVTPHESSLALDSHPEGGVSKGANRNSDEREGGTKRSLNPTEVPRSRSYFQHDKRGS 120
           EGQD TPHESSLALDSHPEGGVSKGANRNSDEREGGTKRSLNPTEVPRSRSYFQHDKRGS
Sbjct: 61  EGQDATPHESSLALDSHPEGGVSKGANRNSDEREGGTKRSLNPTEVPRSRSYFQHDKRGS 120

Query: 121 AGQVGRSFGRSSSSGRGWWKDSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRTR 180
           AGQVGRSFGRSSSSGRGWWKDSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRTR
Sbjct: 121 AGQVGRSFGRSSSSGRGWWKDSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRTR 180

Query: 181 DGSSKLEVDSSAPARKRPAFREKKITPDNENFEKAGMASESKKLSDPHQPQDGRERREER 240
           DGSSKLEVDSSAPARKRPAFREKKITPDNENFEKAGMASESKK SDPHQPQDGRERREER
Sbjct: 181 DGSSKLEVDSSAPARKRPAFREKKITPDNENFEKAGMASESKKPSDPHQPQDGRERREER 240

Query: 241 GRDTRYSDKLSKHVTGDMASKRDEMKRGGYSVRERYGNGGGGGNYRGRDRFGGRQGYPAS 300
           GRDTRYSDKLSKHVTGDMASKRDEMKRGGYSVRERYGNGGGGGNYRGRDRFGGRQGYPAS
Sbjct: 241 GRDTRYSDKLSKHVTGDMASKRDEMKRGGYSVRERYGNGGGGGNYRGRDRFGGRQGYPAS 300

Query: 301 GGTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLAS 338
           GGTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLAS
Sbjct: 301 GGTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLAS 338

[Close]

BLAST of Cp4.1LG01g02630 vs. NCBI nr
Match: XP_022984546.1 (pre-mRNA-splicing factor CWC25 isoform X1 [Cucurbita maxima])

HSP 1 Score: 632 bits (1631), Expect = 6.50e-228
Identity = 335/338 (99.11%), Postives = 336/338 (99.41%), Query Frame = 0


Query: 1   MSRREARESDSKRYRSRFDREPSPKRSRRDRKPLEEKLSRNSSSHVEDNKDRDQKHELRH 60
           MSRREARESDSKRYRSRFDREPSPKRSRRDRKPLEEKLSRNSSSHVEDNKDRDQKHELRH
Sbjct: 1   MSRREARESDSKRYRSRFDREPSPKRSRRDRKPLEEKLSRNSSSHVEDNKDRDQKHELRH 60

Query: 61  EGQDVTPHESSLALDSHPEGGVSKGANRNSDEREGGTKRSLNPTEVPRSRSYFQHDKRGS 120
           EGQDVTPHESSLALDSHPEGGVSKGANRNSDEREGGTKR+LNPTEVPRSRSYFQHDKRGS
Sbjct: 61  EGQDVTPHESSLALDSHPEGGVSKGANRNSDEREGGTKRALNPTEVPRSRSYFQHDKRGS 120

Query: 121 AGQVGRSFGRSSSSGRGWWKDSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRTR 180
           AGQVGRSFGRSSSSGRGWWKDSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRTR
Sbjct: 121 AGQVGRSFGRSSSSGRGWWKDSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRTR 180

Query: 181 DGSSKLEVDSSAPARKRPAFREKKITPDNENFEKAGMASESKKLSDPHQPQDGRERREER 240
           DGSSKLEVDSSAPARKRPAFREKKITPDNENFEKAGMASESKKLSDPH PQDGRERREER
Sbjct: 181 DGSSKLEVDSSAPARKRPAFREKKITPDNENFEKAGMASESKKLSDPHPPQDGRERREER 240

Query: 241 GRDTRYSDKLSKHVTGDMASKRDEMKRGGYSVRERYGNGGGGGNYRGRDRFGGRQGYPAS 300
           GRDTRYSDKLSKHVTGDMASKRDEMKRGGYSVRERYGNGGGGGNYRGRDRFGGRQGYPAS
Sbjct: 241 GRDTRYSDKLSKHVTGDMASKRDEMKRGGYSVRERYGNGGGGGNYRGRDRFGGRQGYPAS 300

Query: 301 GGTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLAS 338
           GGTRVEKWKHDLFHEANRSPTPKNEE QIAKVEALLAS
Sbjct: 301 GGTRVEKWKHDLFHEANRSPTPKNEEAQIAKVEALLAS 338

[Close]

BLAST of Cp4.1LG01g02630 vs. NCBI nr
Match: KAG6600285.1 (hypothetical protein SDJN03_05518, partial [Cucurbita argyrosperma subsp. sororia] >KAG7030943.1 hypothetical protein SDJN02_04980 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 632 bits (1630), Expect = 9.23e-228
Identity = 334/338 (98.82%), Postives = 335/338 (99.11%), Query Frame = 0


Query: 1   MSRREARESDSKRYRSRFDREPSPKRSRRDRKPLEEKLSRNSSSHVEDNKDRDQKHELRH 60
           MSRREARESDSKRYRSRFD+EPSPKRSRRDRKPLEEKLSRNSSSHVEDNKDRDQKHELRH
Sbjct: 1   MSRREARESDSKRYRSRFDKEPSPKRSRRDRKPLEEKLSRNSSSHVEDNKDRDQKHELRH 60

Query: 61  EGQDVTPHESSLALDSHPEGGVSKGANRNSDEREGGTKRSLNPTEVPRSRSYFQHDKRGS 120
           EGQD TPHESSLALDSHPEGGVSKGANRNSDEREGGTKRSLNPTE PRSRSYFQHDKRGS
Sbjct: 61  EGQDATPHESSLALDSHPEGGVSKGANRNSDEREGGTKRSLNPTEAPRSRSYFQHDKRGS 120

Query: 121 AGQVGRSFGRSSSSGRGWWKDSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRTR 180
           AGQVGRSFGRSSSSGRGWWKDSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRTR
Sbjct: 121 AGQVGRSFGRSSSSGRGWWKDSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRTR 180

Query: 181 DGSSKLEVDSSAPARKRPAFREKKITPDNENFEKAGMASESKKLSDPHQPQDGRERREER 240
           DGSSKLEVDSSAPARKRPAFREKKITPDNENFEKAGMASESKK SDPHQPQDGRERREER
Sbjct: 181 DGSSKLEVDSSAPARKRPAFREKKITPDNENFEKAGMASESKKPSDPHQPQDGRERREER 240

Query: 241 GRDTRYSDKLSKHVTGDMASKRDEMKRGGYSVRERYGNGGGGGNYRGRDRFGGRQGYPAS 300
           GRDTRYSDKLSKHVTGDMASKRDEMKRGGYSVRERYGNGGGGGNYRGRDRFGGRQGYPAS
Sbjct: 241 GRDTRYSDKLSKHVTGDMASKRDEMKRGGYSVRERYGNGGGGGNYRGRDRFGGRQGYPAS 300

Query: 301 GGTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLAS 338
           GGTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLAS
Sbjct: 301 GGTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLAS 338

[Close]

BLAST of Cp4.1LG01g02630 vs. NCBI nr
Match: XP_023521659.1 (pre-mRNA-splicing factor CWC25-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 624 bits (1610), Expect = 1.03e-224
Identity = 332/338 (98.22%), Postives = 333/338 (98.52%), Query Frame = 0


Query: 1   MSRREARESDSKRYRSRFDREPSPKRSRRDRKPLEEKLSRNSSSHVEDNKDRDQKHELRH 60
           MSRRE RESDS R+RSRFD E SPKRSRRDRK LEEKLSRNSSSHVEDNKDRDQKHELRH
Sbjct: 1   MSRREIRESDSNRHRSRFDGESSPKRSRRDRKTLEEKLSRNSSSHVEDNKDRDQKHELRH 60

Query: 61  EGQDVTPHESSLALDSHPEGGVSKGANRNSDEREGGTKRSLNPTEVPRSRSYFQHDKRGS 120
           EGQDVTPHESSLALDSHPEGGVSKGANRNSDEREGGTKRSLNPTEVPRSRSYFQHDKRGS
Sbjct: 61  EGQDVTPHESSLALDSHPEGGVSKGANRNSDEREGGTKRSLNPTEVPRSRSYFQHDKRGS 120

Query: 121 AGQVGRSFGRSSSSGRGWWKDSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRTR 180
           AGQVGRSFGRSSSSGRGWWKDSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRTR
Sbjct: 121 AGQVGRSFGRSSSSGRGWWKDSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRTR 180

Query: 181 DGSSKLEVDSSAPARKRPAFREKKITPDNENFEKAGMASESKKLSDPHQPQDGRERREER 240
           DGSSKLEVDSSAPARKRPAFREKKITPDNENFEKAGMASESKKLSDPHQPQDGRERREER
Sbjct: 181 DGSSKLEVDSSAPARKRPAFREKKITPDNENFEKAGMASESKKLSDPHQPQDGRERREER 240

Query: 241 GRDTRYSDKLSKHVTGDMASKRDEMKRGGYSVRERYGNGGGGGNYRGRDRFGGRQGYPAS 300
           GRDTRYSDKLSKHVTGDMASKRDEMKRGGYSVRERYGNGGGGGNYRGRDRFGGRQGYPAS
Sbjct: 241 GRDTRYSDKLSKHVTGDMASKRDEMKRGGYSVRERYGNGGGGGNYRGRDRFGGRQGYPAS 300

Query: 301 GGTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLAS 338
           GGTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLAS
Sbjct: 301 GGTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLAS 338

[Close]

BLAST of Cp4.1LG01g02630 vs. ExPASy TrEMBL
Match: A0A6J1FPJ0 (pre-mRNA-splicing factor CWC25-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111447638 PE=4 SV=1)

HSP 1 Score: 634 bits (1634), Expect = 1.10e-228
Identity = 335/338 (99.11%), Postives = 336/338 (99.41%), Query Frame = 0


Query: 1   MSRREARESDSKRYRSRFDREPSPKRSRRDRKPLEEKLSRNSSSHVEDNKDRDQKHELRH 60
           MSRREARESDSKRYRSRFD+EPSPKRSRRDRKPLEEKLSRNSSSHVEDNKDRDQKHELRH
Sbjct: 1   MSRREARESDSKRYRSRFDKEPSPKRSRRDRKPLEEKLSRNSSSHVEDNKDRDQKHELRH 60

Query: 61  EGQDVTPHESSLALDSHPEGGVSKGANRNSDEREGGTKRSLNPTEVPRSRSYFQHDKRGS 120
           EGQD TPHESSLALDSHPEGGVSKGANRNSDEREGGTKRSLNPTEVPRSRSYFQHDKRGS
Sbjct: 61  EGQDATPHESSLALDSHPEGGVSKGANRNSDEREGGTKRSLNPTEVPRSRSYFQHDKRGS 120

Query: 121 AGQVGRSFGRSSSSGRGWWKDSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRTR 180
           AGQVGRSFGRSSSSGRGWWKDSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRTR
Sbjct: 121 AGQVGRSFGRSSSSGRGWWKDSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRTR 180

Query: 181 DGSSKLEVDSSAPARKRPAFREKKITPDNENFEKAGMASESKKLSDPHQPQDGRERREER 240
           DGSSKLEVDSSAPARKRPAFREKKITPDNENFEKAGMASESKK SDPHQPQDGRERREER
Sbjct: 181 DGSSKLEVDSSAPARKRPAFREKKITPDNENFEKAGMASESKKPSDPHQPQDGRERREER 240

Query: 241 GRDTRYSDKLSKHVTGDMASKRDEMKRGGYSVRERYGNGGGGGNYRGRDRFGGRQGYPAS 300
           GRDTRYSDKLSKHVTGDMASKRDEMKRGGYSVRERYGNGGGGGNYRGRDRFGGRQGYPAS
Sbjct: 241 GRDTRYSDKLSKHVTGDMASKRDEMKRGGYSVRERYGNGGGGGNYRGRDRFGGRQGYPAS 300

Query: 301 GGTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLAS 338
           GGTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLAS
Sbjct: 301 GGTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLAS 338

[Close]

BLAST of Cp4.1LG01g02630 vs. ExPASy TrEMBL
Match: A0A6J1J5K1 (pre-mRNA-splicing factor CWC25 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111482807 PE=4 SV=1)

HSP 1 Score: 632 bits (1631), Expect = 3.15e-228
Identity = 335/338 (99.11%), Postives = 336/338 (99.41%), Query Frame = 0


Query: 1   MSRREARESDSKRYRSRFDREPSPKRSRRDRKPLEEKLSRNSSSHVEDNKDRDQKHELRH 60
           MSRREARESDSKRYRSRFDREPSPKRSRRDRKPLEEKLSRNSSSHVEDNKDRDQKHELRH
Sbjct: 1   MSRREARESDSKRYRSRFDREPSPKRSRRDRKPLEEKLSRNSSSHVEDNKDRDQKHELRH 60

Query: 61  EGQDVTPHESSLALDSHPEGGVSKGANRNSDEREGGTKRSLNPTEVPRSRSYFQHDKRGS 120
           EGQDVTPHESSLALDSHPEGGVSKGANRNSDEREGGTKR+LNPTEVPRSRSYFQHDKRGS
Sbjct: 61  EGQDVTPHESSLALDSHPEGGVSKGANRNSDEREGGTKRALNPTEVPRSRSYFQHDKRGS 120

Query: 121 AGQVGRSFGRSSSSGRGWWKDSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRTR 180
           AGQVGRSFGRSSSSGRGWWKDSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRTR
Sbjct: 121 AGQVGRSFGRSSSSGRGWWKDSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRTR 180

Query: 181 DGSSKLEVDSSAPARKRPAFREKKITPDNENFEKAGMASESKKLSDPHQPQDGRERREER 240
           DGSSKLEVDSSAPARKRPAFREKKITPDNENFEKAGMASESKKLSDPH PQDGRERREER
Sbjct: 181 DGSSKLEVDSSAPARKRPAFREKKITPDNENFEKAGMASESKKLSDPHPPQDGRERREER 240

Query: 241 GRDTRYSDKLSKHVTGDMASKRDEMKRGGYSVRERYGNGGGGGNYRGRDRFGGRQGYPAS 300
           GRDTRYSDKLSKHVTGDMASKRDEMKRGGYSVRERYGNGGGGGNYRGRDRFGGRQGYPAS
Sbjct: 241 GRDTRYSDKLSKHVTGDMASKRDEMKRGGYSVRERYGNGGGGGNYRGRDRFGGRQGYPAS 300

Query: 301 GGTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLAS 338
           GGTRVEKWKHDLFHEANRSPTPKNEE QIAKVEALLAS
Sbjct: 301 GGTRVEKWKHDLFHEANRSPTPKNEEAQIAKVEALLAS 338

[Close]

BLAST of Cp4.1LG01g02630 vs. ExPASy TrEMBL
Match: A0A6J1FQX4 (pre-mRNA-splicing factor CWC25-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111447638 PE=4 SV=1)

HSP 1 Score: 603 bits (1554), Expect = 1.09e-216
Identity = 323/338 (95.56%), Postives = 324/338 (95.86%), Query Frame = 0


Query: 1   MSRREARESDSKRYRSRFDREPSPKRSRRDRKPLEEKLSRNSSSHVEDNKDRDQKHELRH 60
           MSRREARESDSKRYRSRFD+EPSPKRSRRDRKPLEEKLSRNSSSHVEDNKDRDQKHELRH
Sbjct: 1   MSRREARESDSKRYRSRFDKEPSPKRSRRDRKPLEEKLSRNSSSHVEDNKDRDQKHELRH 60

Query: 61  EGQDVTPHESSLALDSHPEGGVSKGANRNSDEREGGTKRSLNPTEVPRSRSYFQHDKRGS 120
           EGQD TPHESSLALDSHPEGGVSKGANRNSDEREGGTKRSLNPTEVPRSRSYFQHDKRGS
Sbjct: 61  EGQDATPHESSLALDSHPEGGVSKGANRNSDEREGGTKRSLNPTEVPRSRSYFQHDKRGS 120

Query: 121 AGQVGRSFGRSSSSGRGWWKDSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRTR 180
           AGQVGRSFGRSSSSGRGWWKDSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRTR
Sbjct: 121 AGQVGRSFGRSSSSGRGWWKDSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRTR 180

Query: 181 DGSSKLEVDSSAPARKRPAFREKKITPDNENFEKAGMASESKKLSDPHQPQDGRERREER 240
           DGSSKLEVDSSAPARKRPAFREKKITPDNENFEKAGMASESKK SDPHQPQDGRERREER
Sbjct: 181 DGSSKLEVDSSAPARKRPAFREKKITPDNENFEKAGMASESKKPSDPHQPQDGRERREER 240

Query: 241 GRDTRYSDKLSKHVTGDMASKRDEMKRGGYSVRERYGNGGGGGNYRGRDRFGGRQGYPAS 300
           GRDTRYSDKLSKHVTGDMASKRDEMKRGG            GGNYRGRDRFGGRQGYPAS
Sbjct: 241 GRDTRYSDKLSKHVTGDMASKRDEMKRGG------------GGNYRGRDRFGGRQGYPAS 300

Query: 301 GGTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLAS 338
           GGTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLAS
Sbjct: 301 GGTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLAS 326

[Close]

BLAST of Cp4.1LG01g02630 vs. ExPASy TrEMBL
Match: A0A6J1JAV5 (pre-mRNA-splicing factor CWC25 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111482807 PE=4 SV=1)

HSP 1 Score: 602 bits (1551), Expect = 3.13e-216
Identity = 323/338 (95.56%), Postives = 324/338 (95.86%), Query Frame = 0


Query: 1   MSRREARESDSKRYRSRFDREPSPKRSRRDRKPLEEKLSRNSSSHVEDNKDRDQKHELRH 60
           MSRREARESDSKRYRSRFDREPSPKRSRRDRKPLEEKLSRNSSSHVEDNKDRDQKHELRH
Sbjct: 1   MSRREARESDSKRYRSRFDREPSPKRSRRDRKPLEEKLSRNSSSHVEDNKDRDQKHELRH 60

Query: 61  EGQDVTPHESSLALDSHPEGGVSKGANRNSDEREGGTKRSLNPTEVPRSRSYFQHDKRGS 120
           EGQDVTPHESSLALDSHPEGGVSKGANRNSDEREGGTKR+LNPTEVPRSRSYFQHDKRGS
Sbjct: 61  EGQDVTPHESSLALDSHPEGGVSKGANRNSDEREGGTKRALNPTEVPRSRSYFQHDKRGS 120

Query: 121 AGQVGRSFGRSSSSGRGWWKDSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRTR 180
           AGQVGRSFGRSSSSGRGWWKDSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRTR
Sbjct: 121 AGQVGRSFGRSSSSGRGWWKDSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRTR 180

Query: 181 DGSSKLEVDSSAPARKRPAFREKKITPDNENFEKAGMASESKKLSDPHQPQDGRERREER 240
           DGSSKLEVDSSAPARKRPAFREKKITPDNENFEKAGMASESKKLSDPH PQDGRERREER
Sbjct: 181 DGSSKLEVDSSAPARKRPAFREKKITPDNENFEKAGMASESKKLSDPHPPQDGRERREER 240

Query: 241 GRDTRYSDKLSKHVTGDMASKRDEMKRGGYSVRERYGNGGGGGNYRGRDRFGGRQGYPAS 300
           GRDTRYSDKLSKHVTGDMASKRDEMKRGG            GGNYRGRDRFGGRQGYPAS
Sbjct: 241 GRDTRYSDKLSKHVTGDMASKRDEMKRGG------------GGNYRGRDRFGGRQGYPAS 300

Query: 301 GGTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLAS 338
           GGTRVEKWKHDLFHEANRSPTPKNEE QIAKVEALLAS
Sbjct: 301 GGTRVEKWKHDLFHEANRSPTPKNEEAQIAKVEALLAS 326

[Close]

BLAST of Cp4.1LG01g02630 vs. ExPASy TrEMBL
Match: A0A0A0KV12 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000750 PE=4 SV=1)

HSP 1 Score: 489 bits (1259), Expect = 1.28e-171
Identity = 272/339 (80.24%), Postives = 295/339 (87.02%), Query Frame = 0


Query: 1   MSRREARESDSKRYRSRFDREPSPKRSRRDRKPLEEKLSRNSSSHVEDNKDRDQKHELRH 60
           MSRREARESDSKR+RSRFDREPSPKRS+RDRK LEEKLSRNSSSHVEDNK+RDQKHELR 
Sbjct: 1   MSRREARESDSKRHRSRFDREPSPKRSKRDRKTLEEKLSRNSSSHVEDNKERDQKHELRL 60

Query: 61  EGQDVTPHESSLALDSHPEGGVSKGANRNSDEREGGTKRSLNPTEVPRSRSYFQHDKRGS 120
            GQD+ PHESSLAL+S PEGG   GANRNSD R+GGTK S+NPTEVPRSRSYFQHD+R +
Sbjct: 61  VGQDMIPHESSLALESKPEGGAGIGANRNSDGRDGGTKHSVNPTEVPRSRSYFQHDERSN 120

Query: 121 AGQVGRSFGRSSSSGRGWWKDSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDNHTRTR 180
           AGQVGRSFGRS++S RGWWKDSK+ DK+SDRASGK+ TY SQ+RDE PQ  +ED H    
Sbjct: 121 AGQVGRSFGRSATSERGWWKDSKDPDKDSDRASGKSLTYKSQQRDEKPQAAREDRH---H 180

Query: 181 DGSSKLEVDSSAPARKRPAFREKKITPDNENFEKAGMASESKKLSDPHQPQDGRERREER 240
           DGSSKLEVD+  PARKRPAFREKKIT DNE+ EK  M  ESKK +D HQ Q+GRERREER
Sbjct: 181 DGSSKLEVDALTPARKRPAFREKKITVDNEDGEKVAMVPESKKSNDLHQIQEGRERREER 240

Query: 241 GRDTRYSDKLS-KHVTGDMASKRDEMKRGGYSVRERYGNGGGGGNYRGRDRFGGRQGYPA 300
           GRD RYS+KL+ KH  GDMASKRDEMKR GY VRERYGNG GGGNYRGRDRFGGRQGY  
Sbjct: 241 GRDPRYSEKLNNKHSNGDMASKRDEMKRVGYPVRERYGNGSGGGNYRGRDRFGGRQGYRT 300

Query: 301 SGGTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLAS 338
           SG TRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALL+S
Sbjct: 301 SG-TRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLSS 335

[Close]

BLAST of Cp4.1LG01g02630 vs. TAIR 10
Match: AT3G19650.1 (cyclin-related )

HSP 1 Score: 122.9 bits (307), Expect = 5.1e-28
Identity = 125/347 (36.02%), Postives = 176/347 (50.72%), Query Frame = 0


Query: 2   SRREARESDSKRYRSRFDREPSPKRSRRDRKPLEEKLSRNSSSHVEDNKD--RDQKHELR 61
           +RRE+R+SD +R+RSR DREPSPKRSRRD KP  E++       V D  D  ++ +  LR
Sbjct: 3   TRRESRDSDPRRHRSRIDREPSPKRSRRDGKPEAERVLSKKDLDVRDGTDTEKNSRQSLR 62

Query: 62  HEGQDVTPHESSLALDSHPEGGVSKGANRNSDEREGG----TKRSLNPTEVPRSRSYFQH 121
                    ++ L LD+H       G+ ++S+++  G    TK + + ++VPRSR Y QH
Sbjct: 63  ---------DAPLELDAH-------GSRKDSEKKHSGHHETTKAAPHLSQVPRSRPYSQH 122

Query: 122 DKRGSAGQVGRSFGRSSSSGRGWWKDSKEQDKNSDRASGKTATYNSQRRDEIPQTVKEDN 181
           D R S G+V     R  +S RG W+ S++Q   S+R +G     +  R+DE   + + D 
Sbjct: 123 DDRRSDGKV----DRRPTSVRGSWRSSRDQ---SNRRAGDDEK-SQHRKDEDKSSWRHDR 182

Query: 182 HTRTRDGSSKLEVDSSAPARKRPAFREKKITPDNENFEKAGMASESKKLSDPHQPQDGRE 241
              + D    L       +RKRPAFREKKI       E+ G  ++  +  D         
Sbjct: 183 FRESDDTQGAL-------SRKRPAFREKKIA------EETGNNTDRTRTEDGKDTNLNNR 242

Query: 242 RREERG-RDTRYSDKLSKHVTG-DMASKRDEMKRGGYSVRERYGNGGGGGNYRGRDRF-- 301
           R+ ER  R   +S++  +   G D    RD+ +          G G        RDRF  
Sbjct: 243 RQNERNWRSNTHSERHERPAMGRDRVWNRDDER----------GAGSRQSYQADRDRFNG 302

Query: 302 GGRQGYPASGGTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLAS 339
            GR G+  S     +KW HDLF EAN+SP    EE+QIAKVEALLAS
Sbjct: 303 NGRSGFSGSWTRNEKKWDHDLFDEANKSPAKATEEEQIAKVEALLAS 302

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g02630 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG01g02630 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023548006.1	1.67e-230	100.00	pre-mRNA-splicing factor CWC25-like [Cucurbita pepo subsp. pepo] >XP_023548014.1...	[more]
XP_022942670.1	2.27e-228	99.11	pre-mRNA-splicing factor CWC25-like isoform X1 [Cucurbita moschata] >XP_02294267...	[more]
XP_022984546.1	6.50e-228	99.11	pre-mRNA-splicing factor CWC25 isoform X1 [Cucurbita maxima]	[more]
KAG6600285.1	9.23e-228	98.82	hypothetical protein SDJN03_05518, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023521659.1	1.03e-224	98.22	pre-mRNA-splicing factor CWC25-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cp4.1LG01g02630 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FPJ0	1.10e-228	99.11	pre-mRNA-splicing factor CWC25-like isoform X1 OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1J5K1	3.15e-228	99.11	pre-mRNA-splicing factor CWC25 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A6J1FQX4	1.09e-216	95.56	pre-mRNA-splicing factor CWC25-like isoform X2 OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1JAV5	3.13e-216	95.56	pre-mRNA-splicing factor CWC25 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A0A0KV12	1.28e-171	80.24	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000750 PE=4 SV=1	[more]

BLAST of Cp4.1LG01g02630 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G19650.1	5.1e-28	36.02	cyclin-related	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..305
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..66
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 166..271
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 137..151
None	No IPR available	PANTHER	PTHR36364	OS03G0203000 PROTEIN	coord: 1..338

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g02630.1	Cp4.1LG01g02630.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016070	RNA metabolic process
cellular_component	GO:0005622	intracellular anatomical structure