Cp4.1LG01g02610 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG01g02610
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Descriptionzinc finger SWIM domain-containing protein 7
LocationCp4.1LG01: 2384511 .. 2388047 (+)
RNA-Seq ExpressionCp4.1LG01g02610
SyntenyCp4.1LG01g02610
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGAACGTGGGGGAGAAAATTTGTCAAAATGTTTGAAGTATTTAGCTTTTGCGCCTAAAAGTTATTAGAGGACCGACATATTTGTATAATTACATCTAATCGATATTAATTTTGTGGTGGATTCATTCAATAATCTGACCCAAAAAAGAAAAATAAAAATTTGTTGAATAATTTGGGGGAGAAATGGATTTAGATTATCCAATATTTCTATAAACAAAATTTAAAATCACACCCAGAAAAATTTGCTGATTTTTTACGAGGAATTTCCTCCAAAATGAGTGCGAGTACCCTCGCCGCCGAAGCAGTGTGGAAGCAGATCGAGTCGACTCGATCAGGTTGCGTTTATTCGATTATTTTCCTTACCTAATTTTCGGATTTTCGTCTTTTTGGTTCTCAATCTTGTGTTAAATCGACGATATCTTTGCTAAAAGAAGCTGAAACTGATTTCGCAGTGACCGACGATCAGCTTTCAATGTGAGTATTCTCGATTCCTTCCATTAGGAGAAGTTCTTCATCTTGTTATGTTTATGAATCTTCGAAGTTGACTGTGTCGGCGCTGGTTCCAGATTGCATTTCTTGTTTGGCAAGAACTTCGAGCGAGCTACTCGGATTGTGGATCAAAGTGGAGTGAAGAGAATTTCAGGCGATCCAAGCGGACGGTCCATCTTTCAGGTGATTACAGTATTTTTCATCTTATTTTTGTTGAAAATTCGATCAAACATCGATTTTAAGTTCACGGTTTCCATTAGGGTTTGCTTAAACTTCCCTAGAACAGATCGTAGTTACATTCTGCTTTTGTTTAAAGCCTCGTGAATGAATGGTCTTGAATTGAACCACGTTTTTTCTCCATCTCTCTAGTGGTAGAGAAGGATTTACACGACACTTAAGGAATGATTTGAGAAGGAATTACACTGTAGAATGCTGTTGGTTTGATATCATGTGCATTGTAGAATGTTGCTGGTTTGATATCATGTGCATTGTAGAATGTTGCTGGTTTGATATCATGTACATTGTAGAATGTTGCTGGTTTGATATCATGTACATTGTAGAATGTTGCTGGTTTGATATCATGTACATTGCTATGTATTACTGAACCTGAAAACTATATTCTTGAATGTGAATATGAGATTAAATCTTTAACCTATCGATTTAAGCTTTTGGATTTAGTCTTGATTTAACATAGTATTAGAGTCGACACTTCTGAGTCGTAGCGACATTATTCAAAGTTGAACACTCATTATGTTTGCAGTTTGCTTGGCCATATGAATCAACATCGAGAAAACCAAAAGCTACTGTAATAGCCCAAGCCTACTGCTAGCAGATATTGTCCTCTTTAGGCTTTCTCTTTTAGACTTCCCCTCAAGGTTTTCAAAACGCATCTGCTAGAGAGAGGTTTCCACACTCTTATAAAGAATGATTTGTTCCCCTCTCCAACGGTTGTAGGATCCCACAATCCACTCCCCATTCGGGGCCAACGTCCTCGCTGGCACACCGCCCGGTGTCTAGCTCAAATCTCACATCGGTTGGAGAGGGGTGCAAAACATTTTCTATAAGGGTGTGGAAACCTCTCCCTAGCAGACACGTTTTAAAATCCTTGAGGGGAAGCCCGAAAGGGAAAGTTCAAAGAGGACGTGGTGGGCTTGGGCTGTTACATTCATACTCAAGATGACGGAGTGTGGTTATTTAGTCATTTGTACATGTTTATACAAGACTTTCCCCAAATCTTTGGTTGCCAGATTCAAAACCAGCCAAATTGTTTGTTTAGAACAAGTAACATTCTTGAGATTCGTTCACAGAATGAGTTCTGGTTTCTTTCAATGTTAGGTTGTGGGAGAATCTCGAAGGAAAGAGGAGTATCTCTGTTTCCCAGAAAACTTTTGTGCCTGTTATTCCTTCTTCTATGACATTGTGAACAGAGGAGAACAGCTTTGCGTAAGGATCACTTCTTTCTTGTTAAGTGTAGCTGAGTTGAAAGCTTTAAGAAAATCCTATTCCTTCCACTTCCCAATCATCTTTATTTGTCGTTCTTTATTTCATAGTGCAAGCATCAGTTAGCTGCAAGGCTTGCTGCTTCACTAGGGGCTTGCATTGAAGTTAAAGTATCTGATGAAGAGCTGGCGATATTATTGTCCAATCTTTAGTGACTTTATCAAAGCCAAAGCTCTCAGTACTCAAAGTTTGAGAGGTAATCAAACACATTGTTGTATTTTACCAACTTTTTCCTTCTGTACTTGAACAGCTTTTGTATCCTGTTGAGCACATAATGAAACTTGCATAATTATAACCATCACAACGTCCTAGGTTTCCTTGGTGAGCTGGTAATTCTCACTTGTTTGTCACGCACTGTGAGATCCTACATCAGTTGGAGAGGCGAACGAAACATTCTTTATAAGAGTGTGGAAACCTCTCTCTAATGGACACGTTTTAAAATATGAGGGGAAGTCCGGAAGGGAGAGCCCAAAGAGGACAATATTTGTTAGCGGTAGGCTTCGGCTGTTACAAATGGTATCAGAGTCAGACACCGGGCAGTGTGTCAGCGAGGATGGTGAGCCCCAATGGGGTGGATTGTGACATCCCACGTCAGTTGGAGAGGGGAAACAAAGTATTCCTTTTAAGGGTATGTAAACCTCTCGCTAGTAGATGCGTTTTAAAACCTTGAGGGGAAGCCCAAAGAGGACAATATTTGCTAGTGGGGGGATTGAGCTGTTACAAATGGTATTAGAGCCGGACACTGGGCAGTATGTCAACGAGGACACCAAGTCTCAAGGGGGTGGATTGTGGGATCTCAAATCAGTTGGAGAAGGGAACGAAAGATTCCTTGGGTGTGGAAACTTTCCCCTAGTAGACGCATTTTAAAACCTTGAGGGAAAGTCCAAAGATCACAATATCTGCTAGCAGTGAGCTTGAACGGTTACAAACTACCATGTTCTATATTTATTTCATTAAATTAGAACAAGCCAACCCTGCAATATCCCCTCTTCCTCGTTCCTTTTTCTTCAGGTTCCAGAATATTTGAGGGGAAACCAAAGGTCTATATCTCATACTTTCCAGATTGAGTTCATATAAAACGTTGCAAGTTTCTGTTAAGGTTAATCATTGATCTACATGAATATGATAGTTATTAATGATTGTGTTTCATTTCTGTAAGATATATATCATTGATTCATATCTATGAACATGCTTGCAAATTATAACCATAGTCTAATACATGCTTGCATATTAAGTTTTCATGATAGATGGATATTGACCCATGGATGTCAATTATTATTCTAGAACTCTTTGGACGACACTTTTTCTCTTGCAAACAGATTTTGTTCAAGGAAAGTTTTGGCCATTACCATAAGTCAAGTCTGCCGTTACTATTAACATCCAGTTCAAATATATTATTTATCTGTATAGTTTAAGAGTCGGGATTTGTGACCGGATTCCTTGTATGTTATATTTGTTTCGGGGTATTGGATATTTGAACCAAAAGTACTTGCCTGAAATAGTTGAGCTGTACTTAAGTTGACAAAATTGCAAGAGTTCGAAAGTTTGA

mRNA sequence

TGAACGTGGGGGAGAAAATTTGTCAAAATGTTTGAAGTATTTAGCTTTTGCGCCTAAAAGTTATTAGAGGACCGACATATTTGTATAATTACATCTAATCGATATTAATTTTGTGGTGGATTCATTCAATAATCTGACCCAAAAAAGAAAAATAAAAATTTGTTGAATAATTTGGGGGAGAAATGGATTTAGATTATCCAATATTTCTATAAACAAAATTTAAAATCACACCCAGAAAAATTTGCTGATTTTTTACGAGGAATTTCCTCCAAAATGAGTGCGAGTACCCTCGCCGCCGAAGCAGTGTGGAAGCAGATCGAGTCGACTCGATCAGTGACCGACGATCAGCTTTCAATATTGCATTTCTTGTTTGGCAAGAACTTCGAGCGAGCTACTCGGATTGTGGATCAAAGTGGAGTGAAGAGAATTTCAGGCGATCCAAGCGGACGGTCCATCTTTCAGGTTGTGGGAGAATCTCGAAGGAAAGAGGAGTATCTCTGTTTCCCAGAAAACTTTTGTGCCTGTTATTCCTTCTTCTATGACATTGTGAACAGAGGAGAACAGCTTTGCTGCAAGCATCAGTTAGCTGCAAGGCTTGCTGCTTCACTAGGGGCTTGCATTGAAGTTAAAGTATCTGATGAAGAGCTGGCGATATTATTGTCCAATCTTTAGTGACTTTATCAAAGCCAAAGCTCTCAGTACTCAAAGTTTGAGAGGTAATCAAACACATTGTTGTATTTTACCAACTTTTTCCTTCTGTACTTGAACAGCTTTTGTATCCTGTTGAGCACATAATGAAACTTGCATAATTATAACCATCACAACGTCCTAGGTTTCCTTGGTGAGCTGGTAATTCTCACTTGTTTGTCACGCACTGTGAGATCCTACATCAGTTGGAGAGGCGAACGAAACATTCTTTATAAGAGTGTGGAAACCTCTCTCTAATGGACACGTTTTAAAATATGAGGGGAAGTCCGGAAGGGAGAGCCCAAAGAGGACAATATTTGTTAGCGGTAGGCTTCGGCTGTTACAAATGGTATCAGAGTCAGACACCGGGCAGTGTGTCAGCGAGGATGGTGAGCCCCAATGGGGTGGATTGTGACATCCCACGTCAGTTGGAGAGGGGAAACAAAGTATTCCTTTTAAGGGTATGTAAACCTCTCGCTAGTAGATGCGTTTTAAAACCTTGAGGGGAAGCCCAAAGAGGACAATATTTGCTAGTGGGGGGATTGAGCTGTTACAAATGGTATTAGAGCCGGACACTGGGCAGTATGTCAACGAGGACACCAAGTCTCAAGGGGGTGGATTGTGGGATCTCAAATCAGTTGGAGAAGGGAACGAAAGATTCCTTGGGTGTGGAAACTTTCCCCTAGTAGACGCATTTTAAAACCTTGAGGGAAAGTCCAAAGATCACAATATCTGCTAGCAGTGAGCTTGAACGGTTACAAACTACCATGTTCTATATTTATTTCATTAAATTAGAACAAGCCAACCCTGCAATATCCCCTCTTCCTCGTTCCTTTTTCTTCAGGTTCCAGAATATTTGAGGGGAAACCAAAGGTCTATATCTCATACTTTCCAGATTGAGTTCATATAAAACGTTGCAAGTTTCTGTTAAGGTTAATCATTGATCTACATGAATATGATAGTTATTAATGATTGTGTTTCATTTCTGTAAGATATATATCATTGATTCATATCTATGAACATGCTTGCAAATTATAACCATAGTCTAATACATGCTTGCATATTAAGTTTTCATGATAGATGGATATTGACCCATGGATGTCAATTATTATTCTAGAACTCTTTGGACGACACTTTTTCTCTTGCAAACAGATTTTGTTCAAGGAAAGTTTTGGCCATTACCATAAGTCAAGTCTGCCGTTACTATTAACATCCAGTTCAAATATATTATTTATCTGTATAGTTTAAGAGTCGGGATTTGTGACCGGATTCCTTGTATGTTATATTTGTTTCGGGGTATTGGATATTTGAACCAAAAGTACTTGCCTGAAATAGTTGAGCTGTACTTAAGTTGACAAAATTGCAAGAGTTCGAAAGTTTGA

Coding sequence (CDS)

ATGAGTGCGAGTACCCTCGCCGCCGAAGCAGTGTGGAAGCAGATCGAGTCGACTCGATCAGTGACCGACGATCAGCTTTCAATATTGCATTTCTTGTTTGGCAAGAACTTCGAGCGAGCTACTCGGATTGTGGATCAAAGTGGAGTGAAGAGAATTTCAGGCGATCCAAGCGGACGGTCCATCTTTCAGGTTGTGGGAGAATCTCGAAGGAAAGAGGAGTATCTCTGTTTCCCAGAAAACTTTTGTGCCTGTTATTCCTTCTTCTATGACATTGTGAACAGAGGAGAACAGCTTTGCTGCAAGCATCAGTTAGCTGCAAGGCTTGCTGCTTCACTAGGGGCTTGCATTGAAGTTAAAGTATCTGATGAAGAGCTGGCGATATTATTGTCCAATCTTTAG

Protein sequence

MSASTLAAEAVWKQIESTRSVTDDQLSILHFLFGKNFERATRIVDQSGVKRISGDPSGRSIFQVVGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAASLGACIEVKVSDEELAILLSNL
Homology
[Close]
BLAST of Cp4.1LG01g02610 vs. NCBI nr
Match: XP_023526305.1 (zinc finger SWIM domain-containing protein 7 isoform X2 [Cucurbita pepo subsp. pepo] >XP_023526312.1 zinc finger SWIM domain-containing protein 7 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 261 bits (667), Expect = 8.50e-88
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0 

Query: 1   MSASTLAAEAVWKQIESTRSVTDDQLSILHFLFGKNFERATRIVDQSGVKRISGDPSGRS 60
           MSASTLAAEAVWKQIESTRSVTDDQLSILHFLFGKNFERATRIVDQSGVKRISGDPSGRS
Sbjct: 1   MSASTLAAEAVWKQIESTRSVTDDQLSILHFLFGKNFERATRIVDQSGVKRISGDPSGRS 60

Query: 61  IFQVVGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAASLGACIEVKV 120
           IFQVVGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAASLGACIEVKV
Sbjct: 61  IFQVVGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAASLGACIEVKV 120

Query: 121 SDEELAILLSNL 132
           SDEELAILLSNL
Sbjct: 121 SDEELAILLSNL 132

[Close]
BLAST of Cp4.1LG01g02610 vs. NCBI nr
Match: KAG6600296.1 (Zinc finger SWIM domain-containing protein 7, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 260 bits (664), Expect = 2.44e-87
Identity = 131/132 (99.24%), Postives = 132/132 (100.00%), Query Frame = 0 

Query: 1   MSASTLAAEAVWKQIESTRSVTDDQLSILHFLFGKNFERATRIVDQSGVKRISGDPSGRS 60
           MSASTLAAEAVWKQIESTRSVTDDQLSILHFLFGKNFERATRIVDQSGVK+ISGDPSGRS
Sbjct: 1   MSASTLAAEAVWKQIESTRSVTDDQLSILHFLFGKNFERATRIVDQSGVKKISGDPSGRS 60

Query: 61  IFQVVGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAASLGACIEVKV 120
           IFQVVGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAASLGACIEVKV
Sbjct: 61  IFQVVGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAASLGACIEVKV 120

Query: 121 SDEELAILLSNL 132
           SDEELAILLSNL
Sbjct: 121 SDEELAILLSNL 132

[Close]
BLAST of Cp4.1LG01g02610 vs. NCBI nr
Match: XP_022942858.1 (zinc finger SWIM domain-containing protein 7 isoform X2 [Cucurbita moschata] >XP_022942859.1 zinc finger SWIM domain-containing protein 7 isoform X2 [Cucurbita moschata])

HSP 1 Score: 258 bits (660), Expect = 9.93e-87
Identity = 130/132 (98.48%), Postives = 132/132 (100.00%), Query Frame = 0 

Query: 1   MSASTLAAEAVWKQIESTRSVTDDQLSILHFLFGKNFERATRIVDQSGVKRISGDPSGRS 60
           MSASTLAAEAVWKQIESTRSVTDDQLSILHFLFGKNFERATRIVDQSGVK+ISG+PSGRS
Sbjct: 1   MSASTLAAEAVWKQIESTRSVTDDQLSILHFLFGKNFERATRIVDQSGVKKISGEPSGRS 60

Query: 61  IFQVVGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAASLGACIEVKV 120
           IFQVVGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAASLGACIEVKV
Sbjct: 61  IFQVVGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAASLGACIEVKV 120

Query: 121 SDEELAILLSNL 132
           SDEELAILLSNL
Sbjct: 121 SDEELAILLSNL 132

[Close]
BLAST of Cp4.1LG01g02610 vs. NCBI nr
Match: KAG7030956.1 (Zinc finger SWIM domain-containing protein 7 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 258 bits (659), Expect = 1.41e-86
Identity = 129/132 (97.73%), Postives = 132/132 (100.00%), Query Frame = 0 

Query: 1   MSASTLAAEAVWKQIESTRSVTDDQLSILHFLFGKNFERATRIVDQSGVKRISGDPSGRS 60
           MSASTLAAEAVWKQIESTRSVTDDQLSILHFLFGKNFERATRIVDQSGVK+ISG+PSGRS
Sbjct: 1   MSASTLAAEAVWKQIESTRSVTDDQLSILHFLFGKNFERATRIVDQSGVKKISGEPSGRS 60

Query: 61  IFQVVGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAASLGACIEVKV 120
           +FQVVGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAASLGACIEVKV
Sbjct: 61  VFQVVGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAASLGACIEVKV 120

Query: 121 SDEELAILLSNL 132
           SDEELAILLSNL
Sbjct: 121 SDEELAILLSNL 132

[Close]
BLAST of Cp4.1LG01g02610 vs. NCBI nr
Match: XP_022983272.1 (zinc finger SWIM domain-containing protein 7 isoform X2 [Cucurbita maxima] >XP_022983279.1 zinc finger SWIM domain-containing protein 7 isoform X2 [Cucurbita maxima] >XP_022983286.1 zinc finger SWIM domain-containing protein 7 isoform X2 [Cucurbita maxima])

HSP 1 Score: 255 bits (651), Expect = 2.34e-85
Identity = 127/132 (96.21%), Postives = 130/132 (98.48%), Query Frame = 0 

Query: 1   MSASTLAAEAVWKQIESTRSVTDDQLSILHFLFGKNFERATRIVDQSGVKRISGDPSGRS 60
           MSASTL AEAVWKQIESTRSVTDDQLSILHFLFGKNFERATRIVDQSGVK+ISG+PSGRS
Sbjct: 1   MSASTLVAEAVWKQIESTRSVTDDQLSILHFLFGKNFERATRIVDQSGVKKISGEPSGRS 60

Query: 61  IFQVVGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAASLGACIEVKV 120
           IFQVVGESRRKEEY CFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAASLGAC+EVKV
Sbjct: 61  IFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAASLGACVEVKV 120

Query: 121 SDEELAILLSNL 132
           SDEELAILLSNL
Sbjct: 121 SDEELAILLSNL 132

[Close]
BLAST of Cp4.1LG01g02610 vs. ExPASy TrEMBL
Match: A0A6J1FSJ7 (zinc finger SWIM domain-containing protein 7 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111447762 PE=4 SV=1)

HSP 1 Score: 258 bits (660), Expect = 4.81e-87
Identity = 130/132 (98.48%), Postives = 132/132 (100.00%), Query Frame = 0 

Query: 1   MSASTLAAEAVWKQIESTRSVTDDQLSILHFLFGKNFERATRIVDQSGVKRISGDPSGRS 60
           MSASTLAAEAVWKQIESTRSVTDDQLSILHFLFGKNFERATRIVDQSGVK+ISG+PSGRS
Sbjct: 1   MSASTLAAEAVWKQIESTRSVTDDQLSILHFLFGKNFERATRIVDQSGVKKISGEPSGRS 60

Query: 61  IFQVVGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAASLGACIEVKV 120
           IFQVVGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAASLGACIEVKV
Sbjct: 61  IFQVVGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAASLGACIEVKV 120

Query: 121 SDEELAILLSNL 132
           SDEELAILLSNL
Sbjct: 121 SDEELAILLSNL 132

[Close]
BLAST of Cp4.1LG01g02610 vs. ExPASy TrEMBL
Match: A0A6J1J6W2 (zinc finger SWIM domain-containing protein 7 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111481893 PE=4 SV=1)

HSP 1 Score: 255 bits (651), Expect = 1.13e-85
Identity = 127/132 (96.21%), Postives = 130/132 (98.48%), Query Frame = 0 

Query: 1   MSASTLAAEAVWKQIESTRSVTDDQLSILHFLFGKNFERATRIVDQSGVKRISGDPSGRS 60
           MSASTL AEAVWKQIESTRSVTDDQLSILHFLFGKNFERATRIVDQSGVK+ISG+PSGRS
Sbjct: 1   MSASTLVAEAVWKQIESTRSVTDDQLSILHFLFGKNFERATRIVDQSGVKKISGEPSGRS 60

Query: 61  IFQVVGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAASLGACIEVKV 120
           IFQVVGESRRKEEY CFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAASLGAC+EVKV
Sbjct: 61  IFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAASLGACVEVKV 120

Query: 121 SDEELAILLSNL 132
           SDEELAILLSNL
Sbjct: 121 SDEELAILLSNL 132

[Close]
BLAST of Cp4.1LG01g02610 vs. ExPASy TrEMBL
Match: A0A0A0KWG5 (SWIM-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G001010 PE=4 SV=1)

HSP 1 Score: 244 bits (622), Expect = 3.00e-81
Identity = 123/132 (93.18%), Postives = 126/132 (95.45%), Query Frame = 0 

Query: 1   MSASTLAAEAVWKQIESTRSVTDDQLSILHFLFGKNFERATRIVDQSGVKRISGDPSGRS 60
           MSAS + AEAVWKQIESTR VTDDQLSILHFLFGKNFERATRIVDQ GVK+ISG PS RS
Sbjct: 1   MSASIVVAEAVWKQIESTRLVTDDQLSILHFLFGKNFERATRIVDQRGVKKISGHPSTRS 60

Query: 61  IFQVVGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAASLGACIEVKV 120
           IFQVVGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAAS+GACIEVKV
Sbjct: 61  IFQVVGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAASVGACIEVKV 120

Query: 121 SDEELAILLSNL 132
           SDEELAILLSNL
Sbjct: 121 SDEELAILLSNL 132

[Close]
BLAST of Cp4.1LG01g02610 vs. ExPASy TrEMBL
Match: A0A1S3BZP2 (zinc finger SWIM domain-containing protein 7 OS=Cucumis melo OX=3656 GN=LOC103494794 PE=4 SV=1)

HSP 1 Score: 241 bits (614), Expect = 4.99e-80
Identity = 121/132 (91.67%), Postives = 125/132 (94.70%), Query Frame = 0 

Query: 1   MSASTLAAEAVWKQIESTRSVTDDQLSILHFLFGKNFERATRIVDQSGVKRISGDPSGRS 60
           MSAS + AEAVWK+IESTR VTDDQLSILHFLFGKNFERATRIVDQ GVK+ISG PS RS
Sbjct: 1   MSASIVVAEAVWKRIESTRLVTDDQLSILHFLFGKNFERATRIVDQRGVKKISGHPSRRS 60

Query: 61  IFQVVGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAASLGACIEVKV 120
           IFQVVGESRRKEEY CFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAAS+GACIEVKV
Sbjct: 61  IFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAASVGACIEVKV 120

Query: 121 SDEELAILLSNL 132
           SDEELAILLSNL
Sbjct: 121 SDEELAILLSNL 132

[Close]
BLAST of Cp4.1LG01g02610 vs. ExPASy TrEMBL
Match: A0A6J1D5Z4 (zinc finger SWIM domain-containing protein 7 OS=Momordica charantia OX=3673 GN=LOC111017621 PE=4 SV=1)

HSP 1 Score: 238 bits (607), Expect = 5.83e-79
Identity = 118/132 (89.39%), Postives = 124/132 (93.94%), Query Frame = 0 

Query: 1   MSASTLAAEAVWKQIESTRSVTDDQLSILHFLFGKNFERATRIVDQSGVKRISGDPSGRS 60
           MSAS + AEAVWKQI+STRSVTDDQLS+LHFLFGKNFERATRIVDQ GVK+I G+PSGRS
Sbjct: 1   MSASAMVAEAVWKQIKSTRSVTDDQLSVLHFLFGKNFERATRIVDQRGVKKIYGEPSGRS 60

Query: 61  IFQVVGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAASLGACIEVKV 120
           IFQVVGESRRKEEY CFPENFCACYSFFYD VNRGEQLCCKHQLAARLAASLGA IE KV
Sbjct: 61  IFQVVGESRRKEEYFCFPENFCACYSFFYDTVNRGEQLCCKHQLAARLAASLGAFIEAKV 120

Query: 121 SDEELAILLSNL 132
           SDEELA+LLSNL
Sbjct: 121 SDEELALLLSNL 132

[Close]
BLAST of Cp4.1LG01g02610 vs. TAIR 10
Match: AT4G33925.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 191.4 bits (485), Expect = 4.5e-49
Identity = 89/132 (67.42%), Postives = 112/132 (84.85%), Query Frame = 0 

Query: 1   MSASTLAAEAVWKQIESTRSVTDDQLSILHFLFGKNFERATRIVDQSGVKRISGDPSGRS 60
           M+ + L A+AVW  IEST SVT++QLSIL  LFGKN E+ATRI+D+ GVK+ISG PSGRS
Sbjct: 1   MNVTLLVADAVWSNIESTGSVTEEQLSILQLLFGKNLEKATRIIDKRGVKKISGLPSGRS 60

Query: 61  IFQVVGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAASLGACIEVKV 120
           IFQVVGES+++EEYLCFP ++C CYSFFYD+V+RGE  CCKHQLAARLA+SLG   E++V
Sbjct: 61  IFQVVGESQKREEYLCFPGDYCGCYSFFYDVVSRGEHQCCKHQLAARLASSLGTYNEIEV 120

Query: 121 SDEELAILLSNL 133
           SD+ LA++LS +
Sbjct: 121 SDDHLALMLSKI 132

[Close]
BLAST of Cp4.1LG01g02610 vs. TAIR 10
Match: AT4G33925.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 6 growth stages; Has 106 Blast hits to 106 proteins in 53 species: Archae - 8; Bacteria - 0; Metazoa - 47; Fungi - 2; Plants - 36; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). )

HSP 1 Score: 177.2 bits (448), Expect = 8.8e-45
Identity = 82/119 (68.91%), Postives = 101/119 (84.87%), Query Frame = 0 

Query: 1   MSASTLAAEAVWKQIESTRSVTDDQLSILHFLFGKNFERATRIVDQSGVKRISGDPSGRS 60
           M+ + L A+AVW  IEST SVT++QLSIL  LFGKN E+ATRI+D+ GVK+ISG PSGRS
Sbjct: 1   MNVTLLVADAVWSNIESTGSVTEEQLSILQLLFGKNLEKATRIIDKRGVKKISGLPSGRS 60

Query: 61  IFQVVGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAASLGACIEVK 120
           IFQVVGES+++EEYLCFP ++C CYSFFYD+V+RGE  CCKHQLAARLA+SLG   E++
Sbjct: 61  IFQVVGESQKREEYLCFPGDYCGCYSFFYDVVSRGEHQCCKHQLAARLASSLGTYNEIE 119

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g02610 vs.
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG01g02610 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023526305.18.50e-88100.00zinc finger SWIM domain-containing protein 7 isoform X2 [Cucurbita pepo subsp. p... [more]
KAG6600296.12.44e-8799.24Zinc finger SWIM domain-containing protein 7, partial [Cucurbita argyrosperma su... [more]
XP_022942858.19.93e-8798.48zinc finger SWIM domain-containing protein 7 isoform X2 [Cucurbita moschata] >XP... [more]
KAG7030956.11.41e-8697.73Zinc finger SWIM domain-containing protein 7 [Cucurbita argyrosperma subsp. argy... [more]
XP_022983272.12.34e-8596.21zinc finger SWIM domain-containing protein 7 isoform X2 [Cucurbita maxima] >XP_0... [more]
BLAST of Cp4.1LG01g02610 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1FSJ74.81e-8798.48zinc finger SWIM domain-containing protein 7 isoform X2 OS=Cucurbita moschata OX... [more]
A0A6J1J6W21.13e-8596.21zinc finger SWIM domain-containing protein 7 isoform X2 OS=Cucurbita maxima OX=3... [more]
A0A0A0KWG53.00e-8193.18SWIM-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G001010 P... [more]
A0A1S3BZP24.99e-8091.67zinc finger SWIM domain-containing protein 7 OS=Cucumis melo OX=3656 GN=LOC10349... [more]
A0A6J1D5Z45.83e-7989.39zinc finger SWIM domain-containing protein 7 OS=Momordica charantia OX=3673 GN=L... [more]
BLAST of Cp4.1LG01g02610 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G33925.14.5e-4967.42unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -... [more]
AT4G33925.28.8e-4568.91unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR28498ZINC FINGER SWIM DOMAIN-CONTAINING PROTEIN 7coord: 2..131
IPR007527Zinc finger, SWIM-typePROSITEPS50966ZF_SWIMcoord: 62..111
score: 8.159615

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g02610.1Cp4.1LG01g02610.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000724 double-strand break repair via homologous recombination
cellular_component GO:0097196 Shu complex
molecular_function GO:0008270 zinc ion binding