Cp4.1LG01g02530 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG01g02530
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	transcription factor bHLH54-like
Location	Cp4.1LG01: 2341237 .. 2342373 (-)
RNA-Seq Expression	Cp4.1LG01g02530
Synteny	Cp4.1LG01g02530

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGCCTATAGCAGAAAGAGAATGGATCTCTGAGGAATCTGATTTCATGGCTAATTTGCTCAGTAATTACTGTCTCCCAAATGAGCTAAGCTCAGATTTGAGCTTGGAAATCCCTTGTGCTTATTGGGAATCCAATGAACCACCATCACTGTCCATGGCAGCCATGGATGAACCTTCTTATTATTCTTCAGATTCCCTCCCTCTTTGGCTGCCTAATGGTGCTTCTTTGTCCTTGGATTTCTCGATGGAGGATGATCGCTTGGACGACAACGGTTCGAGTCGAAAAACAAGGCAATGTAGGCTGCAACACTCCCTTGCTGACCCTGCTGCTGCTACTGCTGTTGCTGTCAATGGGAAAAAGAGGAAAGCTGAGATACATGAGAAAGTTGCATCGATGTCGGTCGTCGAGAACTCGAAGAAGAGGAACGCAAGGCCACCGAAGATCATGAAGCTTGGTTCGGCTAGCTGCAATGAAGAGGATCACATTGGTCAGTGCACAAGTAGCTTCAGCTCTGAGGAGTCTCAAGAAATCAATGGTGGAATTAGTTCAAGTTCAAGCTCAAAAGGGTCTGCCTCTTTGACCTCAAATGGGAAGCCAAGAGCTAGTAGAGGCTCAGCCACTGACCCTCAAAGCCTTTATGCAAGGGTAACCCTTTAAACTCTAAACCACTCCCCTGTTTCTGTCATTTCCCTACACTTTGATATCAAAAACTTAAACAAATTTTCATTCAGAAAAGAAGAGAAAGAATCAATGAAAGGTTGAAGATCTTACAAAGCCTCGTCCCAAATGGCACGAAGGTAAGTCGATATCGATATCGAACGATCATATCTCAAACGATATCAGTGTTTAATTGTTGATATAAGTCTCGTTCGATTTGGCTTGCAGGTTGATATCAGTACAATGCTTGAAGAAGCCGTTGAATATGTGAAGTTCTTGCAGCTTCAAATCAAGGTAAATGATGATTCAAAAGATTAGGGAATATGTTCTTGAATCAAGGCTTGATTTTTGTGTCGAATTTAATCTTTGCAGCTGTTGAGCTCTGATGATCTATGGATGTATGCACCAATTGCTTACAATGGAATGGATATTGGACTTAACTTGAAGCTCATGAAGCAAGACAATGCATCACAGTAG

mRNA sequence

ATGGAGCCTATAGCAGAAAGAGAATGGATCTCTGAGGAATCTGATTTCATGGCTAATTTGCTCAGTAATTACTGTCTCCCAAATGAGCTAAGCTCAGATTTGAGCTTGGAAATCCCTTGTGCTTATTGGGAATCCAATGAACCACCATCACTGTCCATGGCAGCCATGGATGAACCTTCTTATTATTCTTCAGATTCCCTCCCTCTTTGGCTGCCTAATGGTGCTTCTTTGTCCTTGGATTTCTCGATGGAGGATGATCGCTTGGACGACAACGGTTCGAGTCGAAAAACAAGGCAATGTAGGCTGCAACACTCCCTTGCTGACCCTGCTGCTGCTACTGCTGTTGCTGTCAATGGGAAAAAGAGGAAAGCTGAGATACATGAGAAAGTTGCATCGATGTCGGTCGTCGAGAACTCGAAGAAGAGGAACGCAAGGCCACCGAAGATCATGAAGCTTGGTTCGGCTAGCTGCAATGAAGAGGATCACATTGGTCAGTGCACAAGTAGCTTCAGCTCTGAGGAGTCTCAAGAAATCAATGGTGGAATTAGTTCAAGTTCAAGCTCAAAAGGGTCTGCCTCTTTGACCTCAAATGGGAAGCCAAGAGCTAGTAGAGGCTCAGCCACTGACCCTCAAAGCCTTTATGCAAGGAAAAGAAGAGAAAGAATCAATGAAAGGTTGAAGATCTTACAAAGCCTCGTCCCAAATGGCACGAAGGTTGATATCAGTACAATGCTTGAAGAAGCCGTTGAATATGTGAAGTTCTTGCAGCTTCAAATCAAGCTGTTGAGCTCTGATGATCTATGGATGTATGCACCAATTGCTTACAATGGAATGGATATTGGACTTAACTTGAAGCTCATGAAGCAAGACAATGCATCACAGTAG

Coding sequence (CDS)

ATGGAGCCTATAGCAGAAAGAGAATGGATCTCTGAGGAATCTGATTTCATGGCTAATTTGCTCAGTAATTACTGTCTCCCAAATGAGCTAAGCTCAGATTTGAGCTTGGAAATCCCTTGTGCTTATTGGGAATCCAATGAACCACCATCACTGTCCATGGCAGCCATGGATGAACCTTCTTATTATTCTTCAGATTCCCTCCCTCTTTGGCTGCCTAATGGTGCTTCTTTGTCCTTGGATTTCTCGATGGAGGATGATCGCTTGGACGACAACGGTTCGAGTCGAAAAACAAGGCAATGTAGGCTGCAACACTCCCTTGCTGACCCTGCTGCTGCTACTGCTGTTGCTGTCAATGGGAAAAAGAGGAAAGCTGAGATACATGAGAAAGTTGCATCGATGTCGGTCGTCGAGAACTCGAAGAAGAGGAACGCAAGGCCACCGAAGATCATGAAGCTTGGTTCGGCTAGCTGCAATGAAGAGGATCACATTGGTCAGTGCACAAGTAGCTTCAGCTCTGAGGAGTCTCAAGAAATCAATGGTGGAATTAGTTCAAGTTCAAGCTCAAAAGGGTCTGCCTCTTTGACCTCAAATGGGAAGCCAAGAGCTAGTAGAGGCTCAGCCACTGACCCTCAAAGCCTTTATGCAAGGAAAAGAAGAGAAAGAATCAATGAAAGGTTGAAGATCTTACAAAGCCTCGTCCCAAATGGCACGAAGGTTGATATCAGTACAATGCTTGAAGAAGCCGTTGAATATGTGAAGTTCTTGCAGCTTCAAATCAAGCTGTTGAGCTCTGATGATCTATGGATGTATGCACCAATTGCTTACAATGGAATGGATATTGGACTTAACTTGAAGCTCATGAAGCAAGACAATGCATCACAGTAG

Protein sequence

MEPIAEREWISEESDFMANLLSNYCLPNELSSDLSLEIPCAYWESNEPPSLSMAAMDEPSYYSSDSLPLWLPNGASLSLDFSMEDDRLDDNGSSRKTRQCRLQHSLADPAAATAVAVNGKKRKAEIHEKVASMSVVENSKKRNARPPKIMKLGSASCNEEDHIGQCTSSFSSEESQEINGGISSSSSSKGSASLTSNGKPRASRGSATDPQSLYARKRRERINERLKILQSLVPNGTKVDISTMLEEAVEYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLKLMKQDNASQ

Homology

[Close]

BLAST of Cp4.1LG01g02530 vs. ExPASy Swiss-Prot
Match: Q7XHI9 (Transcription factor bHLH84 OS=Arabidopsis thaliana OX=3702 GN=BHLH84 PE=1 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 1.3e-37
Identity = 132/308 (42.86%), Postives = 169/308 (54.87%), Query Frame = 0


Query: 11  SEESDFMANLLSNYCLPNELSSDLSLEIPCAY------WE-----SNEPPSLS--MAAMD 70
           +EE+DFM  LL++Y  P   SS  +     AY      W      S E  S S   AAM 
Sbjct: 16  TEEADFMNQLLASYEQPCGGSSSETTATLTAYHHQGSQWNGGFCFSQESSSYSGYCAAMP 75

Query: 71  EPSYYSSDSLPLWLPNGASLSLDFSMEDDRLDDNGSS---RKTRQCRLQHSLADPAAATA 130
                ++      +     L  + + E D  + +G S    +T      HS+  P  +  
Sbjct: 76  RQEEDNNGMEDATINTNLYLVGEETSECDATEYSGKSLLPLETVAENHDHSMLQPENSLT 135

Query: 131 VAVNGKK-RKAEIHEKVASMSVVENSKKRN--ARPPKIMKLGSASCN--EEDHIGQCTSS 190
              + K   + E  +K    +  + +K+ N   R  K +++   + N  EE++  +    
Sbjct: 136 TTTDEKMFNQCESSKKRTRATTTDKNKRANKARRSQKCVEMSGENENSGEEEYTEKAAGK 195

Query: 191 FSSE---------ESQEINGGISSSSSSKG--SASLTSNGKPRASRGSATDPQSLYARKR 250
             ++            E NGG +  S   G  S +L  NGK RASRG+ATDPQSLYARKR
Sbjct: 196 RKTKPLKPQKTCCSDDESNGGDTFLSKEDGEDSKALNLNGKTRASRGAATDPQSLYARKR 255

Query: 251 RERINERLKILQSLVPNGTKVDISTMLEEAVEYVKFLQLQIKLLSSDDLWMYAPIAYNGM 287
           RERINERL+ILQ LVPNGTKVDISTMLEEAV+YVKFLQLQIKLLSSDDLWMYAPIAYNGM
Sbjct: 256 RERINERLRILQHLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGM 315

[Close]

BLAST of Cp4.1LG01g02530 vs. ExPASy Swiss-Prot
Match: Q84WK0 (Transcription factor RSL2 OS=Arabidopsis thaliana OX=3702 GN=RSL2 PE=2 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 1.3e-37
Identity = 101/174 (58.05%), Postives = 117/174 (67.24%), Query Frame = 0


Query: 112 ATAVAVNGKKRKAEIHEKVASMSVVENSKKRNARPPKIMKL--GSASCNEEDHIGQCTSS 171
           AT+   N + R  +  +K   MS   N  +      K+ K   G+    +      CT  
Sbjct: 176 ATSTDKNKRARVNKRAQKNVEMSGDNNEGEEEEGETKLKKRKNGAMMSRQNSSTTFCTEE 235

Query: 172 FSSEESQEINGGISSSSSSKGSASLTSNGKPRASRGSATDPQSLYARKRRERINERLKIL 231
            S+   Q+  G  SSS     S +L  NGK RASRG+ATDPQSLYARKRRERINERL+IL
Sbjct: 236 ESNCADQDGGGEDSSSKEDDPSKALNLNGKTRASRGAATDPQSLYARKRRERINERLRIL 295

Query: 232 QSLVPNGTKVDISTMLEEAVEYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLN 284
           Q+LVPNGTKVDISTMLEEAV YVKFLQLQIKLLSSDDLWMYAPIA+NGMDIGL+
Sbjct: 296 QNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDDLWMYAPIAFNGMDIGLS 349

[Close]

BLAST of Cp4.1LG01g02530 vs. ExPASy Swiss-Prot
Match: Q8LEG1 (Transcription factor RSL3 OS=Arabidopsis thaliana OX=3702 GN=RSL4 PE=1 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 1.8e-34
Identity = 88/155 (56.77%), Postives = 113/155 (72.90%), Query Frame = 0


Query: 136 VENSKKRNARPPKIMKLGSASCNEEDHIGQCTSSFSSEESQEINGGISSSSSSKGSASLT 195
           VEN  K N+    + +   A   ++  +   +++     +  ++G   S+SS    AS+T
Sbjct: 103 VENLCKTNSN-CDVTRQELAKSKKKQRVSSESNTVDESNTNWVDGQSLSNSSDDEKASVT 162

Query: 196 S-NGKPRASRGSATDPQSLYARKRRERINERLKILQSLVPNGTKVDISTMLEEAVEYVKF 255
           S  GK RA++G+ATDPQSLYARKRRE+INERLK LQ+LVPNGTKVDISTMLEEAV YVKF
Sbjct: 163 SVKGKTRATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTKVDISTMLEEAVHYVKF 222

Query: 256 LQLQIKLLSSDDLWMYAPIAYNGMDIGLNLKLMKQ 290
           LQLQIKLLSSDDLWMYAP+AYNG+D+G +  L+ +
Sbjct: 223 LQLQIKLLSSDDLWMYAPLAYNGLDMGFHHNLLSR 256

[Close]

BLAST of Cp4.1LG01g02530 vs. ExPASy Swiss-Prot
Match: Q3E7L7 (Transcription factor bHLH139 OS=Arabidopsis thaliana OX=3702 GN=BHLH139 PE=3 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 6.4e-32
Identity = 86/157 (54.78%), Postives = 113/157 (71.97%), Query Frame = 0


Query: 138 NSKKRNARPPKIMKLGSASCNEED-----HIGQCTSSFSSEESQEINGGISSSSSSKGSA 197
           +S++   +P K  KL S S    +       GQ  SS++S + ++  G +S++S S    
Sbjct: 72  DSRQDLLKPRKKQKLSSESNLVTEPKTAWRDGQSLSSYNSSDDEKALGLVSNTSKS---- 131

Query: 198 SLTSNGKPRASRGSATDPQSLYARKRRERINERLKILQSLVPNGTKVDISTMLEEAVEYV 257
                 K +A+RG A+DPQSLYARKRRERIN+RLK LQSLVPNGTKVDISTMLE+AV YV
Sbjct: 132 ---LKRKAKANRGIASDPQSLYARKRRERINDRLKTLQSLVPNGTKVDISTMLEDAVHYV 191

Query: 258 KFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLKLMKQ 290
           KFLQLQIKLLSS+DLWMYAP+A+NG+++GL+  L+ +
Sbjct: 192 KFLQLQIKLLSSEDLWMYAPLAHNGLNMGLHHNLLSR 221

[Close]

BLAST of Cp4.1LG01g02530 vs. ExPASy Swiss-Prot
Match: Q2QQ32 (Transcription factor BHLH133 OS=Oryza sativa subsp. japonica OX=39947 GN=BHLH133 PE=2 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 2.3e-21
Identity = 59/105 (56.19%), Postives = 76/105 (72.38%), Query Frame = 0


Query: 172 SEESQEINGGISSSSSSKGSASLTSNGKPRASRGSATDPQSLYARKRRERINERLKILQS 231
           +  S+E+   +S S + K S S  S+             QS YA+ RR+RINERL+ILQ 
Sbjct: 93  TNRSKEVRTKMSVSKACKHSVSAESS-------------QSYYAKNRRQRINERLRILQE 152

Query: 232 LVPNGTKVDISTMLEEAVEYVKFLQLQIKLLSSDDLWMYAPIAYN 277
           L+PNGTKVDISTMLEEA++YVKFL LQIKLLSSD++WMYAP+A++
Sbjct: 153 LIPNGTKVDISTMLEEAIQYVKFLHLQIKLLSSDEMWMYAPLAFD 184

[Close]

BLAST of Cp4.1LG01g02530 vs. NCBI nr
Match: XP_023527031.1 (transcription factor bHLH85-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 558 bits (1438), Expect = 5.62e-200
Identity = 294/294 (100.00%), Postives = 294/294 (100.00%), Query Frame = 0


Query: 1   MEPIAEREWISEESDFMANLLSNYCLPNELSSDLSLEIPCAYWESNEPPSLSMAAMDEPS 60
           MEPIAEREWISEESDFMANLLSNYCLPNELSSDLSLEIPCAYWESNEPPSLSMAAMDEPS
Sbjct: 1   MEPIAEREWISEESDFMANLLSNYCLPNELSSDLSLEIPCAYWESNEPPSLSMAAMDEPS 60

Query: 61  YYSSDSLPLWLPNGASLSLDFSMEDDRLDDNGSSRKTRQCRLQHSLADPAAATAVAVNGK 120
           YYSSDSLPLWLPNGASLSLDFSMEDDRLDDNGSSRKTRQCRLQHSLADPAAATAVAVNGK
Sbjct: 61  YYSSDSLPLWLPNGASLSLDFSMEDDRLDDNGSSRKTRQCRLQHSLADPAAATAVAVNGK 120

Query: 121 KRKAEIHEKVASMSVVENSKKRNARPPKIMKLGSASCNEEDHIGQCTSSFSSEESQEING 180
           KRKAEIHEKVASMSVVENSKKRNARPPKIMKLGSASCNEEDHIGQCTSSFSSEESQEING
Sbjct: 121 KRKAEIHEKVASMSVVENSKKRNARPPKIMKLGSASCNEEDHIGQCTSSFSSEESQEING 180

Query: 181 GISSSSSSKGSASLTSNGKPRASRGSATDPQSLYARKRRERINERLKILQSLVPNGTKVD 240
           GISSSSSSKGSASLTSNGKPRASRGSATDPQSLYARKRRERINERLKILQSLVPNGTKVD
Sbjct: 181 GISSSSSSKGSASLTSNGKPRASRGSATDPQSLYARKRRERINERLKILQSLVPNGTKVD 240

Query: 241 ISTMLEEAVEYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLKLMKQDNASQ 294
           ISTMLEEAVEYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLKLMKQDNASQ
Sbjct: 241 ISTMLEEAVEYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLKLMKQDNASQ 294

[Close]

BLAST of Cp4.1LG01g02530 vs. NCBI nr
Match: XP_022942861.1 (transcription factor bHLH54-like [Cucurbita moschata])

HSP 1 Score: 550 bits (1418), Expect = 6.05e-197
Identity = 292/294 (99.32%), Postives = 293/294 (99.66%), Query Frame = 0


Query: 1   MEPIAEREWISEESDFMANLLSNYCLPNELSSDLSLEIPCAYWESNEPPSLSMAAMDEPS 60
           MEPIAEREWISEESDFMANLLSNYCLPNELSSDLSLEIPCAYWESNEPPSLSMAAMDEPS
Sbjct: 1   MEPIAEREWISEESDFMANLLSNYCLPNELSSDLSLEIPCAYWESNEPPSLSMAAMDEPS 60

Query: 61  YYSSDSLPLWLPNGASLSLDFSMEDDRLDDNGSSRKTRQCRLQHSLADPAAATAVAVNGK 120
           YYSSDSLPLWLPNGASLSLDFSMEDDRLDDNGSSRKTRQCRLQHSLADPAAA AVAVNGK
Sbjct: 61  YYSSDSLPLWLPNGASLSLDFSMEDDRLDDNGSSRKTRQCRLQHSLADPAAA-AVAVNGK 120

Query: 121 KRKAEIHEKVASMSVVENSKKRNARPPKIMKLGSASCNEEDHIGQCTSSFSSEESQEING 180
           KRKAEIHEKVASMSVVENSKKRNARPPKIMKLGSASCN+EDHIGQCTSSFSSEESQEING
Sbjct: 121 KRKAEIHEKVASMSVVENSKKRNARPPKIMKLGSASCNDEDHIGQCTSSFSSEESQEING 180

Query: 181 GISSSSSSKGSASLTSNGKPRASRGSATDPQSLYARKRRERINERLKILQSLVPNGTKVD 240
           GISSSSSSKGSASLTSNGKPRASRGSATDPQSLYARKRRERINERLKILQSLVPNGTKVD
Sbjct: 181 GISSSSSSKGSASLTSNGKPRASRGSATDPQSLYARKRRERINERLKILQSLVPNGTKVD 240

Query: 241 ISTMLEEAVEYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLKLMKQDNASQ 294
           ISTMLEEAVEYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLKLMKQDNASQ
Sbjct: 241 ISTMLEEAVEYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLKLMKQDNASQ 293

[Close]

BLAST of Cp4.1LG01g02530 vs. NCBI nr
Match: KAG7030945.1 (Transcription factor bHLH84, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 548 bits (1413), Expect = 3.77e-196
Identity = 291/295 (98.64%), Postives = 293/295 (99.32%), Query Frame = 0


Query: 1   MEPIAEREWISEESDFMANLLSNYCLPNELSSDLSLEIPCAYWESNEPPSLSMAAMDEPS 60
           MEPIAEREWISEESDFMANLLSNYCLPNELSSDLSLEIPCAYWES+EPPSLSMAAMDEPS
Sbjct: 1   MEPIAEREWISEESDFMANLLSNYCLPNELSSDLSLEIPCAYWESSEPPSLSMAAMDEPS 60

Query: 61  YYSSDSLPLWLPNGASLSLDFSMEDDRLDDNGSSRKTRQCRLQHSLADPAAATA-VAVNG 120
           YYSSDSLPLWLPNGASLSLDFSMEDDRLDDNGSSRKTRQCRLQHSLADPAAA A VAVNG
Sbjct: 61  YYSSDSLPLWLPNGASLSLDFSMEDDRLDDNGSSRKTRQCRLQHSLADPAAAAAAVAVNG 120

Query: 121 KKRKAEIHEKVASMSVVENSKKRNARPPKIMKLGSASCNEEDHIGQCTSSFSSEESQEIN 180
           KKRKAEIHEKVASMSVVENSKKRNARPPKIMKLGSASCN+EDHIGQCTSSFSSEESQEIN
Sbjct: 121 KKRKAEIHEKVASMSVVENSKKRNARPPKIMKLGSASCNDEDHIGQCTSSFSSEESQEIN 180

Query: 181 GGISSSSSSKGSASLTSNGKPRASRGSATDPQSLYARKRRERINERLKILQSLVPNGTKV 240
           GGISSSSSSKGSASLTSNGKPRASRGSATDPQSLYARKRRERINERLKILQSLVPNGTKV
Sbjct: 181 GGISSSSSSKGSASLTSNGKPRASRGSATDPQSLYARKRRERINERLKILQSLVPNGTKV 240

Query: 241 DISTMLEEAVEYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLKLMKQDNASQ 294
           DISTMLEEAVEYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLKLMKQDNASQ
Sbjct: 241 DISTMLEEAVEYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLKLMKQDNASQ 295

[Close]

BLAST of Cp4.1LG01g02530 vs. NCBI nr
Match: KAG6600287.1 (Transcription factor basic helix-loop-helix 84, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 547 bits (1409), Expect = 1.53e-195
Identity = 290/295 (98.31%), Postives = 292/295 (98.98%), Query Frame = 0


Query: 1   MEPIAEREWISEESDFMANLLSNYCLPNELSSDLSLEIPCAYWESNEPPSLSMAAMDEPS 60
           MEPIAEREWISEESDFMANLLSNYCLPNELSSDLSLEIPCAYWES+EPPSLSMAAMDEPS
Sbjct: 1   MEPIAEREWISEESDFMANLLSNYCLPNELSSDLSLEIPCAYWESSEPPSLSMAAMDEPS 60

Query: 61  YYSSDSLPLWLPNGASLSLDFSMEDDRLDDNGSSRKTRQCRLQHSLADPAAATAVA-VNG 120
           YYSSDSLPLWLPNGASLSLDFSMEDDRLDDNGSSRKTRQCRLQHSLADPAAA A A VNG
Sbjct: 61  YYSSDSLPLWLPNGASLSLDFSMEDDRLDDNGSSRKTRQCRLQHSLADPAAAAAAAAVNG 120

Query: 121 KKRKAEIHEKVASMSVVENSKKRNARPPKIMKLGSASCNEEDHIGQCTSSFSSEESQEIN 180
           KKRKAEIHEKVASMSVVENSKKRNARPPKIMKLGSASCN+EDHIGQCTSSFSSEESQEIN
Sbjct: 121 KKRKAEIHEKVASMSVVENSKKRNARPPKIMKLGSASCNDEDHIGQCTSSFSSEESQEIN 180

Query: 181 GGISSSSSSKGSASLTSNGKPRASRGSATDPQSLYARKRRERINERLKILQSLVPNGTKV 240
           GGISSSSSSKGSASLTSNGKPRASRGSATDPQSLYARKRRERINERLKILQSLVPNGTKV
Sbjct: 181 GGISSSSSSKGSASLTSNGKPRASRGSATDPQSLYARKRRERINERLKILQSLVPNGTKV 240

Query: 241 DISTMLEEAVEYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLKLMKQDNASQ 294
           DISTMLEEAVEYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLKLMKQDNASQ
Sbjct: 241 DISTMLEEAVEYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLKLMKQDNASQ 295

[Close]

BLAST of Cp4.1LG01g02530 vs. NCBI nr
Match: XP_022984576.1 (transcription factor bHLH54-like [Cucurbita maxima])

HSP 1 Score: 543 bits (1398), Expect = 6.76e-194
Identity = 289/294 (98.30%), Postives = 289/294 (98.30%), Query Frame = 0


Query: 1   MEPIAEREWISEESDFMANLLSNYCLPNELSSDLSLEIPCAYWESNEPPSLSMAAMDEPS 60
           MEPIAEREWISEESDFMAN LSNYCLPNELSSDLSLEIPCAYWESNEPPSLSMAAMDEPS
Sbjct: 1   MEPIAEREWISEESDFMANFLSNYCLPNELSSDLSLEIPCAYWESNEPPSLSMAAMDEPS 60

Query: 61  YYSSDSLPLWLPNGASLSLDFSMEDDRLDDNGSSRKTRQCRLQHSLADPAAATAVAVNGK 120
           YYSSDSLPLWLPNGASLSLDFSMEDDRLDDN SSRKTRQCRLQHSLADPAAA AVAVNGK
Sbjct: 61  YYSSDSLPLWLPNGASLSLDFSMEDDRLDDNSSSRKTRQCRLQHSLADPAAA-AVAVNGK 120

Query: 121 KRKAEIHEKVASMSVVENSKKRNARPPKIMKLGSASCNEEDHIGQCTSSFSSEESQEING 180
           KRKAEIHEKVASMSVVENSKKRN RPPKIMKL SASCNEEDHIGQCTSSFSSEESQEING
Sbjct: 121 KRKAEIHEKVASMSVVENSKKRNTRPPKIMKLCSASCNEEDHIGQCTSSFSSEESQEING 180

Query: 181 GISSSSSSKGSASLTSNGKPRASRGSATDPQSLYARKRRERINERLKILQSLVPNGTKVD 240
           GISSSSSSKGSASLTSNGKPRASRGSATDPQSLYARKRRERINERLKILQSLVPNGTKVD
Sbjct: 181 GISSSSSSKGSASLTSNGKPRASRGSATDPQSLYARKRRERINERLKILQSLVPNGTKVD 240

Query: 241 ISTMLEEAVEYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLKLMKQDNASQ 294
           ISTMLEEAVEYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLKLMKQDNASQ
Sbjct: 241 ISTMLEEAVEYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLKLMKQDNASQ 293

[Close]

BLAST of Cp4.1LG01g02530 vs. ExPASy TrEMBL
Match: A0A6J1FQ47 (transcription factor bHLH54-like OS=Cucurbita moschata OX=3662 GN=LOC111447764 PE=4 SV=1)

HSP 1 Score: 550 bits (1418), Expect = 2.93e-197
Identity = 292/294 (99.32%), Postives = 293/294 (99.66%), Query Frame = 0


Query: 1   MEPIAEREWISEESDFMANLLSNYCLPNELSSDLSLEIPCAYWESNEPPSLSMAAMDEPS 60
           MEPIAEREWISEESDFMANLLSNYCLPNELSSDLSLEIPCAYWESNEPPSLSMAAMDEPS
Sbjct: 1   MEPIAEREWISEESDFMANLLSNYCLPNELSSDLSLEIPCAYWESNEPPSLSMAAMDEPS 60

Query: 61  YYSSDSLPLWLPNGASLSLDFSMEDDRLDDNGSSRKTRQCRLQHSLADPAAATAVAVNGK 120
           YYSSDSLPLWLPNGASLSLDFSMEDDRLDDNGSSRKTRQCRLQHSLADPAAA AVAVNGK
Sbjct: 61  YYSSDSLPLWLPNGASLSLDFSMEDDRLDDNGSSRKTRQCRLQHSLADPAAA-AVAVNGK 120

Query: 121 KRKAEIHEKVASMSVVENSKKRNARPPKIMKLGSASCNEEDHIGQCTSSFSSEESQEING 180
           KRKAEIHEKVASMSVVENSKKRNARPPKIMKLGSASCN+EDHIGQCTSSFSSEESQEING
Sbjct: 121 KRKAEIHEKVASMSVVENSKKRNARPPKIMKLGSASCNDEDHIGQCTSSFSSEESQEING 180

Query: 181 GISSSSSSKGSASLTSNGKPRASRGSATDPQSLYARKRRERINERLKILQSLVPNGTKVD 240
           GISSSSSSKGSASLTSNGKPRASRGSATDPQSLYARKRRERINERLKILQSLVPNGTKVD
Sbjct: 181 GISSSSSSKGSASLTSNGKPRASRGSATDPQSLYARKRRERINERLKILQSLVPNGTKVD 240

Query: 241 ISTMLEEAVEYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLKLMKQDNASQ 294
           ISTMLEEAVEYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLKLMKQDNASQ
Sbjct: 241 ISTMLEEAVEYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLKLMKQDNASQ 293

[Close]

BLAST of Cp4.1LG01g02530 vs. ExPASy TrEMBL
Match: A0A6J1J5N1 (transcription factor bHLH54-like OS=Cucurbita maxima OX=3661 GN=LOC111482830 PE=4 SV=1)

HSP 1 Score: 543 bits (1398), Expect = 3.27e-194
Identity = 289/294 (98.30%), Postives = 289/294 (98.30%), Query Frame = 0


Query: 1   MEPIAEREWISEESDFMANLLSNYCLPNELSSDLSLEIPCAYWESNEPPSLSMAAMDEPS 60
           MEPIAEREWISEESDFMAN LSNYCLPNELSSDLSLEIPCAYWESNEPPSLSMAAMDEPS
Sbjct: 1   MEPIAEREWISEESDFMANFLSNYCLPNELSSDLSLEIPCAYWESNEPPSLSMAAMDEPS 60

Query: 61  YYSSDSLPLWLPNGASLSLDFSMEDDRLDDNGSSRKTRQCRLQHSLADPAAATAVAVNGK 120
           YYSSDSLPLWLPNGASLSLDFSMEDDRLDDN SSRKTRQCRLQHSLADPAAA AVAVNGK
Sbjct: 61  YYSSDSLPLWLPNGASLSLDFSMEDDRLDDNSSSRKTRQCRLQHSLADPAAA-AVAVNGK 120

Query: 121 KRKAEIHEKVASMSVVENSKKRNARPPKIMKLGSASCNEEDHIGQCTSSFSSEESQEING 180
           KRKAEIHEKVASMSVVENSKKRN RPPKIMKL SASCNEEDHIGQCTSSFSSEESQEING
Sbjct: 121 KRKAEIHEKVASMSVVENSKKRNTRPPKIMKLCSASCNEEDHIGQCTSSFSSEESQEING 180

Query: 181 GISSSSSSKGSASLTSNGKPRASRGSATDPQSLYARKRRERINERLKILQSLVPNGTKVD 240
           GISSSSSSKGSASLTSNGKPRASRGSATDPQSLYARKRRERINERLKILQSLVPNGTKVD
Sbjct: 181 GISSSSSSKGSASLTSNGKPRASRGSATDPQSLYARKRRERINERLKILQSLVPNGTKVD 240

Query: 241 ISTMLEEAVEYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLKLMKQDNASQ 294
           ISTMLEEAVEYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLKLMKQDNASQ
Sbjct: 241 ISTMLEEAVEYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLKLMKQDNASQ 293

[Close]

BLAST of Cp4.1LG01g02530 vs. ExPASy TrEMBL
Match: A0A6J1D5B1 (transcription factor bHLH84-like OS=Momordica charantia OX=3673 GN=LOC111017743 PE=4 SV=1)

HSP 1 Score: 369 bits (947), Expect = 1.76e-124
Identity = 232/361 (64.27%), Postives = 257/361 (71.19%), Query Frame = 0


Query: 4   IAEREWIS-------EESDFMANLLSNYCLPNELSSDLSLEIPCAYWESNEP-PSLSMAA 63
           I+EREWIS       EESDFM NLLSNYCLPNEL+S LSLEIP +YW +NEP P+L+MAA
Sbjct: 7   ISEREWISLSGTYTAEESDFMVNLLSNYCLPNELNSGLSLEIPPSYWAANEPSPALAMAA 66

Query: 64  MDEPSYYSSD----------------------SLPLWLPNGASLSLDFSMED------DR 123
           M+EPSYYSSD                      S PLW PNGASLSLDFSMED       R
Sbjct: 67  MEEPSYYSSDASDSSNIYGLPQGNNNPYSLNDSHPLWFPNGASLSLDFSMEDVGNDDSAR 126

Query: 124 LDD-NGSSRKTRQCRLQHSLADPAAATAVAVNGK----KRKAEI--------HEKVASMS 183
           LDD NGSS+KTRQCRLQ S  + A   A A+NGK    KR+ E+         E   ++S
Sbjct: 127 LDDDNGSSQKTRQCRLQQSPTNSA--VAAAINGKSSQPKRRTEVTAEEAMRDDEVAPTIS 186

Query: 184 VVENSKKRNARPPKIMKL-------------GSASCNEEDHI----GQCTSSFSSE---- 243
           + +N KKR+   P + K                +SCNEEDHI    GQ TSSFSSE    
Sbjct: 187 IDDNPKKRSPSLPDVEKTKRSVRSRKSPKLASGSSCNEEDHIVSPNGQSTSSFSSEDDCN 246

Query: 244 ESQEINGGISSSSSSKGSASLTSNGKPRASRGSATDPQSLYARKRRERINERLKILQSLV 294
           E QEIN G++SS++SKGSASLTSNGKPRASRGSATDPQSLYARKRRERINERL+ILQSLV
Sbjct: 247 EPQEINCGVTSSTNSKGSASLTSNGKPRASRGSATDPQSLYARKRRERINERLRILQSLV 306

[Close]

BLAST of Cp4.1LG01g02530 vs. ExPASy TrEMBL
Match: A0A6J1E5L2 (transcription factor bHLH84-like OS=Cucurbita moschata OX=3662 GN=LOC111430802 PE=4 SV=1)

HSP 1 Score: 333 bits (853), Expect = 7.10e-111
Identity = 216/335 (64.48%), Postives = 236/335 (70.45%), Query Frame = 0


Query: 3   PIAEREWIS-------EESDFMANLLSNYCLPNELSSDLSLEIPCAYWESNEPPSLSMAA 62
           PI+EREWIS       EESDFMANLL+NYCLPNEL+   S  +P A        SL+MA 
Sbjct: 6   PISEREWISLSGAYTAEESDFMANLLNNYCLPNELNPGSSSAVPSA--------SLAMAP 65

Query: 63  MDEPSYYSS--------DSLPLWLPN-GASLSLDFSMED----DRLDDNGSSRKTRQCRL 122
           MDEPSYYS+        DS P WLPN GASLSLDFSMED    DRLDD+GSSRKTRQCRL
Sbjct: 66  MDEPSYYSNHYYTLNENDSHPPWLPNNGASLSLDFSMEDVRNGDRLDDSGSSRKTRQCRL 125

Query: 123 QHSLA---DPAAATAVAVNGKKRKAEIHEKVASMSVVENSKKR---------------NA 182
           Q   A    P     + V     +A   +KVAS  V  NS+KR               N 
Sbjct: 126 QQFPAGSSQPEKRAEITVE----EATKDDKVASTPVDTNSRKRSPSSYNVEKTKTSTRNT 185

Query: 183 RPPKIMKLGSASCNEE-DHI----GQCTSSFSSEESQEINGGISSSSSSKGSASLTSNGK 242
           R  K  K+ S SCNEE DHI    G CTSSFSSE+  + NGGI+SSS      +L+S+GK
Sbjct: 186 RARKSSKIASGSCNEEEDHIVSPNGLCTSSFSSED--DCNGGITSSS------TLSSSGK 245

Query: 243 PRASRGSATDPQSLYARKRRERINERLKILQSLVPNGTKVDISTMLEEAVEYVKFLQLQI 294
           PRASRGSATDPQSLYARKRRERINERL++LQSLVPNGTKVDISTMLEEAVEYVKFLQLQI
Sbjct: 246 PRASRGSATDPQSLYARKRRERINERLRMLQSLVPNGTKVDISTMLEEAVEYVKFLQLQI 305

[Close]

BLAST of Cp4.1LG01g02530 vs. ExPASy TrEMBL
Match: A0A0A0KT10 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G000890 PE=4 SV=1)

HSP 1 Score: 333 bits (853), Expect = 1.43e-110
Identity = 224/351 (63.82%), Postives = 243/351 (69.23%), Query Frame = 0


Query: 4   IAEREWIS-------EESDFMANLLSNYCLPNELSSDLSLEIPCAYW-ESNEPPSLSMAA 63
           I+EREWIS       EESDFMANLLSNYC+PNEL+SDLSLEIP +YW  SNEP   S  A
Sbjct: 5   ISEREWISLSGAYTAEESDFMANLLSNYCIPNELNSDLSLEIPSSYWASSNEPSYYSSDA 64

Query: 64  MDEPSYYS------------SDSLP-LWLPN-GASLSLDFSMED----DRLDDNGSS-RK 123
            D  + Y+            +DS P LWLPN GASLSLDFS+ED    D LDDNGS+ RK
Sbjct: 65  SDSSNIYALSQPNNNLPYTFNDSNPTLWLPNNGASLSLDFSIEDVRNADCLDDNGSNIRK 124

Query: 124 TRQC-RLQHSLADPAAATAVAVNGK----KRKAEI--------HEKVASMSVVENSKKR- 183
           TRQC RLQ S AD        VNGK    KR+A           +KV  +SV   S+KR 
Sbjct: 125 TRQCSRLQQSPADSV------VNGKSSQPKRRANDVMVEEAMRDDKVGPVSVENFSRKRP 184

Query: 184 -----------NARPPKIMKLGSASCNEEDHI----GQCTSSFSSE----ESQEINGGIS 243
                      + R  K  K+ S SCNEED I    GQCTSSFSSE    E+QE NGGI+
Sbjct: 185 QSLLDVEKTKRSGRARKTSKIASGSCNEEDQIVSPNGQCTSSFSSEDDCNEAQENNGGIT 244

Query: 244 SSSSSKGSASLTSNGKPRASRGSATDPQSLYARKRRERINERLKILQSLVPNGTKVDIST 294
           SSS        TSNGKPRASRGSATDPQSLYARKRRERINERL+ILQSLVPNGTKVDIST
Sbjct: 245 SSS--------TSNGKPRASRGSATDPQSLYARKRRERINERLRILQSLVPNGTKVDIST 304

[Close]

BLAST of Cp4.1LG01g02530 vs. TAIR 10
Match: AT2G14760.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 158.3 bits (399), Expect = 9.4e-39
Identity = 132/308 (42.86%), Postives = 169/308 (54.87%), Query Frame = 0


Query: 11  SEESDFMANLLSNYCLPNELSSDLSLEIPCAY------WE-----SNEPPSLS--MAAMD 70
           +EE+DFM  LL++Y  P   SS  +     AY      W      S E  S S   AAM 
Sbjct: 16  TEEADFMNQLLASYEQPCGGSSSETTATLTAYHHQGSQWNGGFCFSQESSSYSGYCAAMP 75

Query: 71  EPSYYSSDSLPLWLPNGASLSLDFSMEDDRLDDNGSS---RKTRQCRLQHSLADPAAATA 130
                ++      +     L  + + E D  + +G S    +T      HS+  P  +  
Sbjct: 76  RQEEDNNGMEDATINTNLYLVGEETSECDATEYSGKSLLPLETVAENHDHSMLQPENSLT 135

Query: 131 VAVNGKK-RKAEIHEKVASMSVVENSKKRN--ARPPKIMKLGSASCN--EEDHIGQCTSS 190
              + K   + E  +K    +  + +K+ N   R  K +++   + N  EE++  +    
Sbjct: 136 TTTDEKMFNQCESSKKRTRATTTDKNKRANKARRSQKCVEMSGENENSGEEEYTEKAAGK 195

Query: 191 FSSE---------ESQEINGGISSSSSSKG--SASLTSNGKPRASRGSATDPQSLYARKR 250
             ++            E NGG +  S   G  S +L  NGK RASRG+ATDPQSLYARKR
Sbjct: 196 RKTKPLKPQKTCCSDDESNGGDTFLSKEDGEDSKALNLNGKTRASRGAATDPQSLYARKR 255

Query: 251 RERINERLKILQSLVPNGTKVDISTMLEEAVEYVKFLQLQIKLLSSDDLWMYAPIAYNGM 287
           RERINERL+ILQ LVPNGTKVDISTMLEEAV+YVKFLQLQIKLLSSDDLWMYAPIAYNGM
Sbjct: 256 RERINERLRILQHLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGM 315

[Close]

BLAST of Cp4.1LG01g02530 vs. TAIR 10
Match: AT4G33880.1 (ROOT HAIR DEFECTIVE 6-LIKE 2 )

HSP 1 Score: 158.3 bits (399), Expect = 9.4e-39
Identity = 101/174 (58.05%), Postives = 117/174 (67.24%), Query Frame = 0


Query: 112 ATAVAVNGKKRKAEIHEKVASMSVVENSKKRNARPPKIMKL--GSASCNEEDHIGQCTSS 171
           AT+   N + R  +  +K   MS   N  +      K+ K   G+    +      CT  
Sbjct: 176 ATSTDKNKRARVNKRAQKNVEMSGDNNEGEEEEGETKLKKRKNGAMMSRQNSSTTFCTEE 235

Query: 172 FSSEESQEINGGISSSSSSKGSASLTSNGKPRASRGSATDPQSLYARKRRERINERLKIL 231
            S+   Q+  G  SSS     S +L  NGK RASRG+ATDPQSLYARKRRERINERL+IL
Sbjct: 236 ESNCADQDGGGEDSSSKEDDPSKALNLNGKTRASRGAATDPQSLYARKRRERINERLRIL 295

Query: 232 QSLVPNGTKVDISTMLEEAVEYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLN 284
           Q+LVPNGTKVDISTMLEEAV YVKFLQLQIKLLSSDDLWMYAPIA+NGMDIGL+
Sbjct: 296 QNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDDLWMYAPIAFNGMDIGLS 349

[Close]

BLAST of Cp4.1LG01g02530 vs. TAIR 10
Match: AT2G14760.3 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 149.1 bits (375), Expect = 5.7e-36
Identity = 132/321 (41.12%), Postives = 169/321 (52.65%), Query Frame = 0


Query: 11  SEESDFMANLLSNYCLPNELSSDLSLEIPCAY------WE-----SNEPPSLS--MAAMD 70
           +EE+DFM  LL++Y  P   SS  +     AY      W      S E  S S   AAM 
Sbjct: 16  TEEADFMNQLLASYEQPCGGSSSETTATLTAYHHQGSQWNGGFCFSQESSSYSGYCAAMP 75

Query: 71  EPSYYSSDSLPLWLPNGASLSLDFSMEDDRLDDNGSS---RKTRQCRLQHSLADPAAATA 130
                ++      +     L  + + E D  + +G S    +T      HS+  P  +  
Sbjct: 76  RQEEDNNGMEDATINTNLYLVGEETSECDATEYSGKSLLPLETVAENHDHSMLQPENSLT 135

Query: 131 VAVNGKK-RKAEIHEKVASMSVVENSKKRN--ARPPKIMKLGSASCN--EEDHIGQCTSS 190
              + K   + E  +K    +  + +K+ N   R  K +++   + N  EE++  +    
Sbjct: 136 TTTDEKMFNQCESSKKRTRATTTDKNKRANKARRSQKCVEMSGENENSGEEEYTEKAAGK 195

Query: 191 FSSE---------ESQEINGGISSSSSSKG--SASLTSNGKPRASRGSATDPQSLYAR-- 250
             ++            E NGG +  S   G  S +L  NGK RASRG+ATDPQSLYAR  
Sbjct: 196 RKTKPLKPQKTCCSDDESNGGDTFLSKEDGEDSKALNLNGKTRASRGAATDPQSLYARLK 255

Query: 251 -----------KRRERINERLKILQSLVPNGTKVDISTMLEEAVEYVKFLQLQIKLLSSD 287
                      KRRERINERL+ILQ LVPNGTKVDISTMLEEAV+YVKFLQLQIKLLSSD
Sbjct: 256 QLNKVHCMMVQKRRERINERLRILQHLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSD 315

[Close]

BLAST of Cp4.1LG01g02530 vs. TAIR 10
Match: AT1G27740.1 (root hair defective 6-like 4 )

HSP 1 Score: 147.9 bits (372), Expect = 1.3e-35
Identity = 88/155 (56.77%), Postives = 113/155 (72.90%), Query Frame = 0


Query: 136 VENSKKRNARPPKIMKLGSASCNEEDHIGQCTSSFSSEESQEINGGISSSSSSKGSASLT 195
           VEN  K N+    + +   A   ++  +   +++     +  ++G   S+SS    AS+T
Sbjct: 103 VENLCKTNSN-CDVTRQELAKSKKKQRVSSESNTVDESNTNWVDGQSLSNSSDDEKASVT 162

Query: 196 S-NGKPRASRGSATDPQSLYARKRRERINERLKILQSLVPNGTKVDISTMLEEAVEYVKF 255
           S  GK RA++G+ATDPQSLYARKRRE+INERLK LQ+LVPNGTKVDISTMLEEAV YVKF
Sbjct: 163 SVKGKTRATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTKVDISTMLEEAVHYVKF 222

Query: 256 LQLQIKLLSSDDLWMYAPIAYNGMDIGLNLKLMKQ 290
           LQLQIKLLSSDDLWMYAP+AYNG+D+G +  L+ +
Sbjct: 223 LQLQIKLLSSDDLWMYAPLAYNGLDMGFHHNLLSR 256

[Close]

BLAST of Cp4.1LG01g02530 vs. TAIR 10
Match: AT5G43175.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 139.4 bits (350), Expect = 4.5e-33
Identity = 86/157 (54.78%), Postives = 113/157 (71.97%), Query Frame = 0


Query: 138 NSKKRNARPPKIMKLGSASCNEED-----HIGQCTSSFSSEESQEINGGISSSSSSKGSA 197
           +S++   +P K  KL S S    +       GQ  SS++S + ++  G +S++S S    
Sbjct: 72  DSRQDLLKPRKKQKLSSESNLVTEPKTAWRDGQSLSSYNSSDDEKALGLVSNTSKS---- 131

Query: 198 SLTSNGKPRASRGSATDPQSLYARKRRERINERLKILQSLVPNGTKVDISTMLEEAVEYV 257
                 K +A+RG A+DPQSLYARKRRERIN+RLK LQSLVPNGTKVDISTMLE+AV YV
Sbjct: 132 ---LKRKAKANRGIASDPQSLYARKRRERINDRLKTLQSLVPNGTKVDISTMLEDAVHYV 191

Query: 258 KFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLKLMKQ 290
           KFLQLQIKLLSS+DLWMYAP+A+NG+++GL+  L+ +
Sbjct: 192 KFLQLQIKLLSSEDLWMYAPLAHNGLNMGLHHNLLSR 221

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g02530 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7XHI9	1.3e-37	42.86	Transcription factor bHLH84 OS=Arabidopsis thaliana OX=3702 GN=BHLH84 PE=1 SV=1	[more]
Q84WK0	1.3e-37	58.05	Transcription factor RSL2 OS=Arabidopsis thaliana OX=3702 GN=RSL2 PE=2 SV=1	[more]
Q8LEG1	1.8e-34	56.77	Transcription factor RSL3 OS=Arabidopsis thaliana OX=3702 GN=RSL4 PE=1 SV=1	[more]
Q3E7L7	6.4e-32	54.78	Transcription factor bHLH139 OS=Arabidopsis thaliana OX=3702 GN=BHLH139 PE=3 SV=...	[more]
Q2QQ32	2.3e-21	56.19	Transcription factor BHLH133 OS=Oryza sativa subsp. japonica OX=39947 GN=BHLH133...	[more]

BLAST of Cp4.1LG01g02530 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023527031.1	5.62e-200	100.00	transcription factor bHLH85-like [Cucurbita pepo subsp. pepo]	[more]
XP_022942861.1	6.05e-197	99.32	transcription factor bHLH54-like [Cucurbita moschata]	[more]
KAG7030945.1	3.77e-196	98.64	Transcription factor bHLH84, partial [Cucurbita argyrosperma subsp. argyrosperma...	[more]
KAG6600287.1	1.53e-195	98.31	Transcription factor basic helix-loop-helix 84, partial [Cucurbita argyrosperma ...	[more]
XP_022984576.1	6.76e-194	98.30	transcription factor bHLH54-like [Cucurbita maxima]	[more]

BLAST of Cp4.1LG01g02530 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FQ47	2.93e-197	99.32	transcription factor bHLH54-like OS=Cucurbita moschata OX=3662 GN=LOC111447764 P...	[more]
A0A6J1J5N1	3.27e-194	98.30	transcription factor bHLH54-like OS=Cucurbita maxima OX=3661 GN=LOC111482830 PE=...	[more]
A0A6J1D5B1	1.76e-124	64.27	transcription factor bHLH84-like OS=Momordica charantia OX=3673 GN=LOC111017743 ...	[more]
A0A6J1E5L2	7.10e-111	64.48	transcription factor bHLH84-like OS=Cucurbita moschata OX=3662 GN=LOC111430802 P...	[more]
A0A0A0KT10	1.43e-110	63.82	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G000890 PE=4 S...	[more]

BLAST of Cp4.1LG01g02530 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G14760.1	9.4e-39	42.86	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT4G33880.1	9.4e-39	58.05	ROOT HAIR DEFECTIVE 6-LIKE 2	[more]
AT2G14760.3	5.7e-36	41.12	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G27740.1	1.3e-35	56.77	root hair defective 6-like 4	[more]
AT5G43175.1	4.5e-33	54.78	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 212..261 e-value: 2.2E-12 score: 57.1
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 216..256 e-value: 6.5E-10 score: 38.9
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 206..255 score: 15.605356
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 208..264 e-value: 1.4E-12 score: 49.1
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 206..272
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 165..216
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 165..210
None	No IPR available	PANTHER	PTHR16223	TRANSCRIPTION FACTOR BHLH83-RELATED	coord: 122..288
None	No IPR available	PANTHER	PTHR16223:SF219	TRANSCRIPTION FACTOR BHLH139-LIKE	coord: 122..288
None	No IPR available	CDD	cd11454	bHLH_AtIND_like	coord: 207..269 e-value: 7.2672E-37 score: 124.041

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g02530.1	Cp4.1LG01g02530.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding