Cp4.1LG01g02410 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG01g02410
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionPRKR-interacting protein 1
LocationCp4.1LG01: 2447179 .. 2449889 (+)
RNA-Seq ExpressionCp4.1LG01g02410
SyntenyCp4.1LG01g02410
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAATGGACCTTTTGTTCAACACAAAAACTGTCAGTTTAATCGAATTCGTAGGGCGCGGAACGGAGGCGGCGAAAATCCACAGCTCTTCGACGACCGACAAAGATAAAGAATCGGGAGTTCACTGGAAGGTCGAAGAAACATTGCTGTTAGGGTAACAGGAAGAGATTTTTGTTGATTGTTGGAGGAAATTTTCACAATTAGGGTTTTAGGGTTTCTGGAATATCATGTCAACCGGCAAGCTGAAGGATGGGGACCGTCGGCTGGTGATTCCGATGCCCCCCAAACCGAAATCTGATACCCAGTTGGCGACAACCGAGACGAACGCGCTTGTGGCATATACGCCGCCGGTGAAGGAGGAGGATGAGGATTTGGAGGTCAAGCTCCGAAGAATCATCGATAATGTTCCTGTTCGTGTCAGCAACACGTCTGGAAGCTCTGCTGGTTCTGGTTCCGGTGATTTTCACCAGGTACTTGAGTGATTTATGTTGTTTTATATTGCGTAAATTTTATTAGTGACTTCTGTCTGCGGTTTATTCTCTCGTGGGCGTGTTTTCATGATGAATGGATGTAAAATTGTACCATTGCATTACTGGGATTGATTAGCAACGAGTGTGATTCCTATCTTAGGTCTTATGATATGAAACAATCTGGTTTCGGTACATTACAGGTTTTTAAATTCTTGCGACTGTTAGCTGGTAATGAGTGGAAGAACTGATTATTGGGGGAATTAGGCTGGGTGTGAACAACAATATTTCCCTTACCAAAGGTGTGAAAATCCAGACTATTATTGAATAAGGAAGATGCCCCTTTCTTTGATGGAAATTTGAGTAAACAAAATTCTTAGATTGGGTTTAGCTCGTGGATGATCTTTTTTTTTAATATATGGACGAAGGGGAGCCATAGGGTTGGTGGGATGATTACAAAAATGTTCATAAGCGAGTTGGAAAAGGTAGAATCCAAACCTGGCAAAAAGAGATAACGTACCTTGTAGGAGTACAACTTTTAGATTTATGAGATTGGATGTTTGTAGATAATTGTAAAATTAGAACACTTAACTAGCTTATTGTGGTGGATTTCGAATTGTGTATTTGGCTCACCGTCGGATACAGGATAGTCGGTGTTCTTTTTAACTGGACGAAGCTTTTTTCATTTACCATCTTAAAATGTTGTTATTATGCGAGTGAAATATCATATATTTGATTAAAATGTTGTTATTAATCGTATGCTCACGCGGGAGTAGCATAGCAACTTAGCATTAACTATATGCTAGTTGGTTGGTACTTTCTTTACGATCAGATAATGTCTATGCTGAAGCTAAGACTTACTGGCTTCACCTTATAGATTTTCACAGTGAAGAAAGTTTAAAATTATGGTGTGCTAGTCTGAGATTCAAAGCTGACTGCTGCCAAGCAGAATTTGATTTATTGGAGAGTTTTAAATGGATTGGAGCGATGATTTGTTCCACGCACTCGAATTTACGTATGACCTATCGAAGTTAGGTCGTTGTGGATACCATTAGGAAGTAATGATCGTGGAGTAGCAGTAGAGGGTTGACAAGTACTCTGTTTGCAAGCAATGCTCTGAAATCTTAGCTCGTGGAAATGCATCGCTTGCTTTTGTTGGTTTTTGGTGTCATCTAAGAAATGTTTTGATGTCATTTAATAGAAGTGAAAGGACGTGGTTTATAAATATACTGTTCGACGTGAAAGAAATTCTTTTTAGTCTGGTGTTAAATGGGTCTTTCATATTTTGAATCTTGATGTAGTTAAGAAAGGTAATGTATTACAATGGGGAATTGAAAGTTTTTACCTACTCAAACATCATCTGATGATTCTTATATGTGTTTAGGAAAGAAAGTCTCCACTTGTGTTGTTAAGCCTACAATTTTCACTTCAGATTGTATATGCATCAGACCTACCTTTTTGTTTGATCTATTTATTTTCCTCTCCATCCTTGATAATGAGCAACTGTTCGCGAGTTTGTGGAGTCTGTCTCGATCGTTGAATATATATACTAATACGTGCCTGCCCATCAAATTTTCAAATGACAGTATAGGCAAATGAGGCGAAAAGAACAAGACAGACTTGCTAGAATGGACGTTGATTATCAGAAAAAGAAAGAAATAGCCGAATTCAATATGCGAAGGGAAGAACGGTTGAAAGCTGCCGAGGAACGCACTTCAAAGAAGCGACTAAAGCGTCAAAAGAAAAAGCAAAGAAGAAAAGAAAAGAAGAGCAAGTTGAATTCAGGCGGAGGAGATGAGAATCAGAAAGACGCATCCTCTGGCGATGAAGGGGATACCGATAATGGCGAGGATGAAGCAACATGACTCGTTATTCTCCACCCGGAATCGAAGTTTGAACTCTTAGCCTCGAGCTTTCAGACGAGCCATCTAACCAGAGACAGCTACCAGTACCTGGAATCTGGCTTTTGTGTTTTTATTGCAGGTGGGATTGGAAGAATGTTGCATTTGAATGAATACACAATTCTCCCATCTTCCCACAGGACCTCTATCTTTCTCTCAATTGCATGGCGCTGAAATGTGTTAGCAGAATATCTATAACATTATTACATGTAGAACAGATTGACATAATATTAGTCGAGTCCGAGGGATACTCATGATTGTGTTATAATGATTCGTTGCTTATGATATATGAACAGAGGGGACGTTGATCTACGATCAGTCAACCCTGACATGCTCGTAGAAACA

mRNA sequence

AAAATGGACCTTTTGTTCAACACAAAAACTGTCAGTTTAATCGAATTCGTAGGGCGCGGAACGGAGGCGGCGAAAATCCACAGCTCTTCGACGACCGACAAAGATAAAGAATCGGGAGTTCACTGGAAGGTCGAAGAAACATTGCTGTTAGGGTAACAGGAAGAGATTTTTGTTGATTGTTGGAGGAAATTTTCACAATTAGGGTTTTAGGGTTTCTGGAATATCATGTCAACCGGCAAGCTGAAGGATGGGGACCGTCGGCTGGTGATTCCGATGCCCCCCAAACCGAAATCTGATACCCAGTTGGCGACAACCGAGACGAACGCGCTTGTGGCATATACGCCGCCGGTGAAGGAGGAGGATGAGGATTTGGAGGTCAAGCTCCGAAGAATCATCGATAATGTTCCTGTTCGTGTCAGCAACACGTCTGGAAGCTCTGCTGGTTCTGGTTCCGGTGATTTTCACCAGTATAGGCAAATGAGGCGAAAAGAACAAGACAGACTTGCTAGAATGGACGTTGATTATCAGAAAAAGAAAGAAATAGCCGAATTCAATATGCGAAGGGAAGAACGGTTGAAAGCTGCCGAGGAACGCACTTCAAAGAAGCGACTAAAGCGTCAAAAGAAAAAGCAAAGAAGAAAAGAAAAGAAGAGCAAGTTGAATTCAGGCGGAGGAGATGAGAATCAGAAAGACGCATCCTCTGGCGATGAAGGGGATACCGATAATGGCGAGGATGAAGCAACATGACTCGTTATTCTCCACCCGGAATCGAAGTTTGAACTCTTAGCCTCGAGCTTTCAGACGAGCCATCTAACCAGAGACAGCTACCAGTACCTGGAATCTGGCTTTTGTGTTTTTATTGCAGGTGGGATTGGAAGAATGTTGCATTTGAATGAATACACAATTCTCCCATCTTCCCACAGGACCTCTATCTTTCTCTCAATTGCATGGCGCTGAAATGTGTTAGCAGAATATCTATAACATTATTACATGTAGAACAGATTGACATAATATTAGTCGAGTCCGAGGGATACTCATGATTGTGTTATAATGATTCGTTGCTTATGATATATGAACAGAGGGGACGTTGATCTACGATCAGTCAACCCTGACATGCTCGTAGAAACA

Coding sequence (CDS)

ATGTCAACCGGCAAGCTGAAGGATGGGGACCGTCGGCTGGTGATTCCGATGCCCCCCAAACCGAAATCTGATACCCAGTTGGCGACAACCGAGACGAACGCGCTTGTGGCATATACGCCGCCGGTGAAGGAGGAGGATGAGGATTTGGAGGTCAAGCTCCGAAGAATCATCGATAATGTTCCTGTTCGTGTCAGCAACACGTCTGGAAGCTCTGCTGGTTCTGGTTCCGGTGATTTTCACCAGTATAGGCAAATGAGGCGAAAAGAACAAGACAGACTTGCTAGAATGGACGTTGATTATCAGAAAAAGAAAGAAATAGCCGAATTCAATATGCGAAGGGAAGAACGGTTGAAAGCTGCCGAGGAACGCACTTCAAAGAAGCGACTAAAGCGTCAAAAGAAAAAGCAAAGAAGAAAAGAAAAGAAGAGCAAGTTGAATTCAGGCGGAGGAGATGAGAATCAGAAAGACGCATCCTCTGGCGATGAAGGGGATACCGATAATGGCGAGGATGAAGCAACATGA

Protein sequence

MSTGKLKDGDRRLVIPMPPKPKSDTQLATTETNALVAYTPPVKEEDEDLEVKLRRIIDNVPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERLKAAEERTSKKRLKRQKKKQRRKEKKSKLNSGGGDENQKDASSGDEGDTDNGEDEAT
Homology
[Close]
BLAST of Cp4.1LG01g02410 vs. ExPASy Swiss-Prot
Match: Q2KIT1 (PRKR-interacting protein 1 OS=Bos taurus OX=9913 GN=PRKRIP1 PE=2 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 2.5e-07
Identity = 67/179 (37.43%), Postives = 89/179 (49.72%), Query Frame = 0 

Query: 18  PPKPKSDTQLATTETNALVAYTPPVKEEDEDLEVKLRRIIDN----VPVR---------- 77
           PP+PK + Q      NA            E+ ++KL R++ N    VP+           
Sbjct: 11  PPRPKKEPQALIIPKNAA-----------EEQKLKLERLMKNPDKAVPIPEKMSEWAPRP 70

Query: 78  ----VSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERLKA 137
               V +  GSSAG+GSG+FH YR +RR+E  R   MD   +K+K  AEF  R E    A
Sbjct: 71  PPEFVRDVMGSSAGAGSGEFHVYRHLRRREYQRQDYMDAMAEKQKLEAEFQKRLERNKIA 130

Query: 138 AEERTSKKRLKRQKKKQRR-KEKKSKL----NSGGGDENQKDASSGDE---GDTDNGED 171
           AEE+T+K+R KRQK K+++   KK KL     S    E Q+  SSG E   G  D  ED
Sbjct: 131 AEEQTAKRRKKRQKLKEKKLLAKKMKLEQKKQSEASSETQEQPSSGSEEASGTEDEEED 178

[Close]
BLAST of Cp4.1LG01g02410 vs. ExPASy Swiss-Prot
Match: Q9H875 (PRKR-interacting protein 1 OS=Homo sapiens OX=9606 GN=PRKRIP1 PE=1 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 1.2e-06
Identity = 63/177 (35.59%), Postives = 89/177 (50.28%), Query Frame = 0 

Query: 18  PPKPKSDTQLATTETNALVAYTPPVKEEDEDLEVKLRRIIDN----VPVR---------- 77
           PP+PK + Q      NA            E+ ++KL R++ N    VP+           
Sbjct: 11  PPRPKKEPQTLVIPKNAA-----------EEQKLKLERLMKNPDKAVPIPEKMSEWAPRP 70

Query: 78  ----VSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERLKA 137
               V +  GSSAG+GSG+FH YR +RR+E  R   MD   +K+K  AEF  R E+   A
Sbjct: 71  PPEFVRDVMGSSAGAGSGEFHVYRHLRRREYQRQDYMDAMAEKQKLDAEFQKRLEKNKIA 130

Query: 138 AEERTSKKRLKRQKKKQRR-KEKKSKL----NSGGGDENQKDASSGDEGDTDNGEDE 172
           AEE+T+K+R KRQK K+++   KK KL      G G   ++ +SS  E      E+E
Sbjct: 131 AEEQTAKRRKKRQKLKEKKLLAKKMKLEQKKQEGPGQPKEQGSSSSAEASGTEEEEE 176

[Close]
BLAST of Cp4.1LG01g02410 vs. ExPASy Swiss-Prot
Match: Q9CWV6 (PRKR-interacting protein 1 OS=Mus musculus OX=10090 GN=Prkrip1 PE=1 SV=2)

HSP 1 Score: 54.7 bits (130), Expect = 1.2e-06
Identity = 64/178 (35.96%), Postives = 89/178 (50.00%), Query Frame = 0 

Query: 18  PPKPKSDTQLATTETNALVAYTPPVKEEDEDLEVKLRRIIDN----VPVR---------- 77
           PP+PK + Q      NA            E+ ++KL R++ N    VP+           
Sbjct: 11  PPRPKKEPQTLVIPKNAA-----------EEQKLKLERLMKNPDKAVPIPEKMNEWAPRA 70

Query: 78  ----VSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERLKA 137
               V +  GSSAG+GSG+FH YR +RR+E  R   MD   +K+K  AEF  R E+   A
Sbjct: 71  PPEFVRDVMGSSAGAGSGEFHVYRHLRRREYQRQDYMDAMAEKQKLDAEFQKRLEKNKIA 130

Query: 138 AEERTSKKRLKRQKKKQRR-KEKKSKLNSGGGDE-----NQKDASSGDEGDTDNGEDE 172
           AEE+T+K+R KRQK K+++   KK KL      E      ++ ASS DE      E+E
Sbjct: 131 AEEQTAKRRKKRQKLKEKKLLAKKMKLEQKKQKEEPSQCQEQHASSSDEASETEEEEE 177

[Close]
BLAST of Cp4.1LG01g02410 vs. ExPASy Swiss-Prot
Match: Q5R5J3 (PRKR-interacting protein 1 OS=Pongo abelii OX=9601 GN=PRKRIP1 PE=2 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 1.2e-06
Identity = 63/177 (35.59%), Postives = 89/177 (50.28%), Query Frame = 0 

Query: 18  PPKPKSDTQLATTETNALVAYTPPVKEEDEDLEVKLRRIIDN----VPVR---------- 77
           PP+PK + Q      NA            E+ ++KL R++ N    VP+           
Sbjct: 11  PPRPKKEPQTLVIPKNAA-----------EEQKLKLERLMKNPDKAVPIPEKMSEWAPRP 70

Query: 78  ----VSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERLKA 137
               V +  GSSAG+GSG+FH YR +RR+E  R   MD   +K+K  AEF  R E+   A
Sbjct: 71  PPEFVRDVMGSSAGAGSGEFHVYRHLRRREYQRQDYMDAMAEKQKLDAEFQKRLEKNKIA 130

Query: 138 AEERTSKKRLKRQKKKQRR-KEKKSKL----NSGGGDENQKDASSGDEGDTDNGEDE 172
           AEE+T+K+R KRQK K+++   KK KL      G G   ++ +SS  E      E+E
Sbjct: 131 AEEQTAKRRKKRQKLKEKKLLAKKMKLEQKKQEGPGQPKEQGSSSSAEASGTEEEEE 176

[Close]
BLAST of Cp4.1LG01g02410 vs. ExPASy Swiss-Prot
Match: Q568A0 (PRKR-interacting protein 1 homolog OS=Danio rerio OX=7955 GN=prkrip1 PE=2 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 2.3e-05
Identity = 46/111 (41.44%), Postives = 71/111 (63.96%), Query Frame = 0 

Query: 61  PVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERLKAA 120
           P  V +  GSSAG+GSG+FH YR +RR+E  R   ++   +K+K   E+  +  E  KAA
Sbjct: 61  PEFVRDVMGSSAGAGSGEFHVYRHLRRREYQRQDFLERLSEKQKLDEEYKEKLIENQKAA 120

Query: 121 EERTSKKRLKRQKKKQRR-KEKKSKLNSGGGDENQKDASS----GDEGDTD 167
           E+RT+K+R KR+K KQ++   KK+K+ S   ++++K +SS    G+E D D
Sbjct: 121 EDRTAKRRKKREKLKQKKLMAKKAKMESQKEEDSEKSSSSSASEGEEKDDD 171

[Close]
BLAST of Cp4.1LG01g02410 vs. NCBI nr
Match: XP_023512975.1 (PRKR-interacting protein 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 310 bits (794), Expect = 7.93e-106
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 0 

Query: 1   MSTGKLKDGDRRLVIPMPPKPKSDTQLATTETNALVAYTPPVKEEDEDLEVKLRRIIDNV 60
           MSTGKLKDGDRRLVIPMPPKPKSDTQLATTETNALVAYTPPVKEEDEDLEVKLRRIIDNV
Sbjct: 1   MSTGKLKDGDRRLVIPMPPKPKSDTQLATTETNALVAYTPPVKEEDEDLEVKLRRIIDNV 60

Query: 61  PVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERLKAA 120
           PVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERLKAA
Sbjct: 61  PVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERLKAA 120

Query: 121 EERTSKKRLKRQKKKQRRKEKKSKLNSGGGDENQKDASSGDEGDTDNGEDEAT 173
           EERTSKKRLKRQKKKQRRKEKKSKLNSGGGDENQKDASSGDEGDTDNGEDEAT
Sbjct: 121 EERTSKKRLKRQKKKQRRKEKKSKLNSGGGDENQKDASSGDEGDTDNGEDEAT 173

[Close]
BLAST of Cp4.1LG01g02410 vs. NCBI nr
Match: KAG6600308.1 (PRKR-interacting protein 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7030967.1 PRKR-interacting protein 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 307 bits (787), Expect = 9.25e-105
Identity = 171/173 (98.84%), Postives = 173/173 (100.00%), Query Frame = 0 

Query: 1   MSTGKLKDGDRRLVIPMPPKPKSDTQLATTETNALVAYTPPVKEEDEDLEVKLRRIIDNV 60
           MS+GKLKDGDRRLVIPMPPKPKSDTQLATTETNALVAYTPPVKEEDEDLEVKLRRIIDNV
Sbjct: 1   MSSGKLKDGDRRLVIPMPPKPKSDTQLATTETNALVAYTPPVKEEDEDLEVKLRRIIDNV 60

Query: 61  PVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERLKAA 120
           PVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERLKAA
Sbjct: 61  PVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERLKAA 120

Query: 121 EERTSKKRLKRQKKKQRRKEKKSKLNSGGGDENQKDASSGDEGDTDNGEDEAT 173
           EERTSKKRLKRQKKKQRRKEKKSKLNSGGGDENQKDASSGD+GDTDNGEDEAT
Sbjct: 121 EERTSKKRLKRQKKKQRRKEKKSKLNSGGGDENQKDASSGDDGDTDNGEDEAT 173

[Close]
BLAST of Cp4.1LG01g02410 vs. NCBI nr
Match: XP_022941948.1 (PRKR-interacting protein 1 [Cucurbita moschata])

HSP 1 Score: 306 bits (784), Expect = 2.65e-104
Identity = 171/173 (98.84%), Postives = 172/173 (99.42%), Query Frame = 0 

Query: 1   MSTGKLKDGDRRLVIPMPPKPKSDTQLATTETNALVAYTPPVKEEDEDLEVKLRRIIDNV 60
           MSTGKLKDGDRRLVIPMPPKPKSDTQLATTE+NALVAYTPPVKEEDEDLEVKLRRIIDNV
Sbjct: 1   MSTGKLKDGDRRLVIPMPPKPKSDTQLATTESNALVAYTPPVKEEDEDLEVKLRRIIDNV 60

Query: 61  PVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERLKAA 120
           PVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERLKAA
Sbjct: 61  PVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERLKAA 120

Query: 121 EERTSKKRLKRQKKKQRRKEKKSKLNSGGGDENQKDASSGDEGDTDNGEDEAT 173
           EERTSKKRLKRQKKKQRRKEKKSKLNS GGDENQKDASSGDEGDTDNGEDEAT
Sbjct: 121 EERTSKKRLKRQKKKQRRKEKKSKLNSSGGDENQKDASSGDEGDTDNGEDEAT 173

[Close]
BLAST of Cp4.1LG01g02410 vs. NCBI nr
Match: XP_022983002.1 (PRKR-interacting protein 1 [Cucurbita maxima])

HSP 1 Score: 306 bits (783), Expect = 3.77e-104
Identity = 170/173 (98.27%), Postives = 173/173 (100.00%), Query Frame = 0 

Query: 1   MSTGKLKDGDRRLVIPMPPKPKSDTQLATTETNALVAYTPPVKEEDEDLEVKLRRIIDNV 60
           MSTGKLKDGDRRLVIPMPPKPKSDTQLATTE+NALVAYTPPVKEEDEDLEVKLRRIIDNV
Sbjct: 1   MSTGKLKDGDRRLVIPMPPKPKSDTQLATTESNALVAYTPPVKEEDEDLEVKLRRIIDNV 60

Query: 61  PVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERLKAA 120
           PVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERLKAA
Sbjct: 61  PVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERLKAA 120

Query: 121 EERTSKKRLKRQKKKQRRKEKKSKLNSGGGDENQKDASSGDEGDTDNGEDEAT 173
           EERTSKKRLKRQKK+QRRKEKKSKLNSGGGDENQKDASSG+EGDTDNGEDEAT
Sbjct: 121 EERTSKKRLKRQKKRQRRKEKKSKLNSGGGDENQKDASSGEEGDTDNGEDEAT 173

[Close]
BLAST of Cp4.1LG01g02410 vs. NCBI nr
Match: XP_022149170.1 (PRKR-interacting protein 1 [Momordica charantia])

HSP 1 Score: 288 bits (736), Expect = 5.30e-97
Identity = 160/173 (92.49%), Postives = 170/173 (98.27%), Query Frame = 0 

Query: 1   MSTGKLKDGDRRLVIPMPPKPKSDTQLATTETNALVAYTPPVKEEDEDLEVKLRRIIDNV 60
           MSTG+LKDGDRRLV+PMPP+PKS+TQLA+T++NALVAYTPPVKEEDEDLEVKLRRIIDNV
Sbjct: 1   MSTGRLKDGDRRLVVPMPPEPKSETQLASTDSNALVAYTPPVKEEDEDLEVKLRRIIDNV 60

Query: 61  PVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERLKAA 120
           PVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQ+KKEIAEFNMRREERLKAA
Sbjct: 61  PVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQRKKEIAEFNMRREERLKAA 120

Query: 121 EERTSKKRLKRQKKKQRRKEKKSKLNSGGGDENQKDASSGDEGDTDNGEDEAT 173
           EERT KKRLKRQKKKQRRKEKK K+NSGG DENQKDASSGD+GDTDNGEDEAT
Sbjct: 121 EERTEKKRLKRQKKKQRRKEKKRKVNSGG-DENQKDASSGDDGDTDNGEDEAT 172

[Close]
BLAST of Cp4.1LG01g02410 vs. ExPASy TrEMBL
Match: A0A6J1FTH7 (PRKR-interacting protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111447158 PE=4 SV=1)

HSP 1 Score: 306 bits (784), Expect = 1.28e-104
Identity = 171/173 (98.84%), Postives = 172/173 (99.42%), Query Frame = 0 

Query: 1   MSTGKLKDGDRRLVIPMPPKPKSDTQLATTETNALVAYTPPVKEEDEDLEVKLRRIIDNV 60
           MSTGKLKDGDRRLVIPMPPKPKSDTQLATTE+NALVAYTPPVKEEDEDLEVKLRRIIDNV
Sbjct: 1   MSTGKLKDGDRRLVIPMPPKPKSDTQLATTESNALVAYTPPVKEEDEDLEVKLRRIIDNV 60

Query: 61  PVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERLKAA 120
           PVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERLKAA
Sbjct: 61  PVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERLKAA 120

Query: 121 EERTSKKRLKRQKKKQRRKEKKSKLNSGGGDENQKDASSGDEGDTDNGEDEAT 173
           EERTSKKRLKRQKKKQRRKEKKSKLNS GGDENQKDASSGDEGDTDNGEDEAT
Sbjct: 121 EERTSKKRLKRQKKKQRRKEKKSKLNSSGGDENQKDASSGDEGDTDNGEDEAT 173

[Close]
BLAST of Cp4.1LG01g02410 vs. ExPASy TrEMBL
Match: A0A6J1IY34 (PRKR-interacting protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111481671 PE=4 SV=1)

HSP 1 Score: 306 bits (783), Expect = 1.82e-104
Identity = 170/173 (98.27%), Postives = 173/173 (100.00%), Query Frame = 0 

Query: 1   MSTGKLKDGDRRLVIPMPPKPKSDTQLATTETNALVAYTPPVKEEDEDLEVKLRRIIDNV 60
           MSTGKLKDGDRRLVIPMPPKPKSDTQLATTE+NALVAYTPPVKEEDEDLEVKLRRIIDNV
Sbjct: 1   MSTGKLKDGDRRLVIPMPPKPKSDTQLATTESNALVAYTPPVKEEDEDLEVKLRRIIDNV 60

Query: 61  PVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERLKAA 120
           PVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERLKAA
Sbjct: 61  PVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERLKAA 120

Query: 121 EERTSKKRLKRQKKKQRRKEKKSKLNSGGGDENQKDASSGDEGDTDNGEDEAT 173
           EERTSKKRLKRQKK+QRRKEKKSKLNSGGGDENQKDASSG+EGDTDNGEDEAT
Sbjct: 121 EERTSKKRLKRQKKRQRRKEKKSKLNSGGGDENQKDASSGEEGDTDNGEDEAT 173

[Close]
BLAST of Cp4.1LG01g02410 vs. ExPASy TrEMBL
Match: A0A6J1D4Z8 (PRKR-interacting protein 1 OS=Momordica charantia OX=3673 GN=LOC111017661 PE=4 SV=1)

HSP 1 Score: 288 bits (736), Expect = 2.57e-97
Identity = 160/173 (92.49%), Postives = 170/173 (98.27%), Query Frame = 0 

Query: 1   MSTGKLKDGDRRLVIPMPPKPKSDTQLATTETNALVAYTPPVKEEDEDLEVKLRRIIDNV 60
           MSTG+LKDGDRRLV+PMPP+PKS+TQLA+T++NALVAYTPPVKEEDEDLEVKLRRIIDNV
Sbjct: 1   MSTGRLKDGDRRLVVPMPPEPKSETQLASTDSNALVAYTPPVKEEDEDLEVKLRRIIDNV 60

Query: 61  PVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERLKAA 120
           PVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQ+KKEIAEFNMRREERLKAA
Sbjct: 61  PVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQRKKEIAEFNMRREERLKAA 120

Query: 121 EERTSKKRLKRQKKKQRRKEKKSKLNSGGGDENQKDASSGDEGDTDNGEDEAT 173
           EERT KKRLKRQKKKQRRKEKK K+NSGG DENQKDASSGD+GDTDNGEDEAT
Sbjct: 121 EERTEKKRLKRQKKKQRRKEKKRKVNSGG-DENQKDASSGDDGDTDNGEDEAT 172

[Close]
BLAST of Cp4.1LG01g02410 vs. ExPASy TrEMBL
Match: A0A0A0L705 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G199600 PE=4 SV=1)

HSP 1 Score: 283 bits (723), Expect = 2.46e-95
Identity = 161/173 (93.06%), Postives = 165/173 (95.38%), Query Frame = 0 

Query: 1   MSTGKLKDGDRRLVIPMPPKPKSDTQLATTETNALVAYTPPVKEEDEDLEVKLRRIIDNV 60
           MSTGKLKDG+RRLVIPMPPKPK DTQLAT E+NALV YTPPVKEEDEDLEVKLRRIIDNV
Sbjct: 1   MSTGKLKDGERRLVIPMPPKPKPDTQLATAESNALVEYTPPVKEEDEDLEVKLRRIIDNV 60

Query: 61  PVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERLKAA 120
           PVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREER+KAA
Sbjct: 61  PVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERMKAA 120

Query: 121 EERTSKKRLKRQKKKQRRKEKKSKLNSGGGDENQKDASSGDEGDTDNGEDEAT 173
           EERTSKKRLKRQKKKQRRKEK+SKLNSG  DENQKD SS DEGDTD GEDEAT
Sbjct: 121 EERTSKKRLKRQKKKQRRKEKRSKLNSGE-DENQKDESSDDEGDTDKGEDEAT 172

[Close]
BLAST of Cp4.1LG01g02410 vs. ExPASy TrEMBL
Match: A0A1S3C2Q3 (PRKR-interacting protein 1 OS=Cucumis melo OX=3656 GN=LOC103496186 PE=4 SV=1)

HSP 1 Score: 280 bits (715), Expect = 4.07e-94
Identity = 158/173 (91.33%), Postives = 166/173 (95.95%), Query Frame = 0 

Query: 1   MSTGKLKDGDRRLVIPMPPKPKSDTQLATTETNALVAYTPPVKEEDEDLEVKLRRIIDNV 60
           MSTGKLKDG+RRLVIPMPPKPK +TQLATTE+NALV YTPPVKEEDEDLEVKLRRIIDNV
Sbjct: 1   MSTGKLKDGERRLVIPMPPKPKPETQLATTESNALVEYTPPVKEEDEDLEVKLRRIIDNV 60

Query: 61  PVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERLKAA 120
           PVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREER+KAA
Sbjct: 61  PVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERMKAA 120

Query: 121 EERTSKKRLKRQKKKQRRKEKKSKLNSGGGDENQKDASSGDEGDTDNGEDEAT 173
           EERT+KKRLKRQKKKQRRKEK+SK+NSG  DENQK+ SS DEGDTD GEDEAT
Sbjct: 121 EERTAKKRLKRQKKKQRRKEKRSKMNSGE-DENQKEESSDDEGDTDKGEDEAT 172

[Close]
BLAST of Cp4.1LG01g02410 vs. TAIR 10
Match: AT2G15270.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1168 (InterPro:IPR009548); Has 1930 Blast hits to 1364 proteins in 219 species: Archae - 0; Bacteria - 44; Metazoa - 762; Fungi - 280; Plants - 96; Viruses - 3; Other Eukaryotes - 745 (source: NCBI BLink). )

HSP 1 Score: 160.2 bits (404), Expect = 1.5e-39
Identity = 108/180 (60.00%), Postives = 133/180 (73.89%), Query Frame = 0 

Query: 1   MSTGKLKDGDRRLVIPMPPKPKSDTQLATTE--------TNALVAYTPPVK-EEDEDLEV 60
           MS+GK K GD RLV+       + T  A  E        ++++V Y PPV  E++EDLEV
Sbjct: 1   MSSGKPKQGDTRLVV------AATTASALMEAKKADHGGSSSIVEYKPPVMLEDEEDLEV 60

Query: 61  KLRRIIDNVPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNM 120
           KLRRI++NVPVRVSNTSGSSAGSGSGDFHQYRQMRR+EQDRL RMD+DY K+ ++AEF +
Sbjct: 61  KLRRILENVPVRVSNTSGSSAGSGSGDFHQYRQMRRREQDRLTRMDIDYNKRLKMAEFTI 120

Query: 121 RREERLKAAEERTSKKRLKRQKKKQRRKEKKSKLNSGGGDENQKDASSGDEGDTDNGEDE 172
           RREE+ KAAEE+TSKKRLKRQKKKQ+++EKK K N+   +E  K    G E  +D GEDE
Sbjct: 121 RREEKQKAAEEKTSKKRLKRQKKKQKKQEKKQKPNT--TEEEVKQPRVG-EISSDEGEDE 171

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g02410 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q2KIT12.5e-0737.43PRKR-interacting protein 1 OS=Bos taurus OX=9913 GN=PRKRIP1 PE=2 SV=1[more]
Q9H8751.2e-0635.59PRKR-interacting protein 1 OS=Homo sapiens OX=9606 GN=PRKRIP1 PE=1 SV=1[more]
Q9CWV61.2e-0635.96PRKR-interacting protein 1 OS=Mus musculus OX=10090 GN=Prkrip1 PE=1 SV=2[more]
Q5R5J31.2e-0635.59PRKR-interacting protein 1 OS=Pongo abelii OX=9601 GN=PRKRIP1 PE=2 SV=1[more]
Q568A02.3e-0541.44PRKR-interacting protein 1 homolog OS=Danio rerio OX=7955 GN=prkrip1 PE=2 SV=1[more]
BLAST of Cp4.1LG01g02410 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023512975.17.93e-106100.00PRKR-interacting protein 1 [Cucurbita pepo subsp. pepo][more]
KAG6600308.19.25e-10598.84PRKR-interacting protein 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG... [more]
XP_022941948.12.65e-10498.84PRKR-interacting protein 1 [Cucurbita moschata][more]
XP_022983002.13.77e-10498.27PRKR-interacting protein 1 [Cucurbita maxima][more]
XP_022149170.15.30e-9792.49PRKR-interacting protein 1 [Momordica charantia][more]
BLAST of Cp4.1LG01g02410 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1FTH71.28e-10498.84PRKR-interacting protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111447158 PE=4 SV... [more]
A0A6J1IY341.82e-10498.27PRKR-interacting protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111481671 PE=4 SV=1[more]
A0A6J1D4Z82.57e-9792.49PRKR-interacting protein 1 OS=Momordica charantia OX=3673 GN=LOC111017661 PE=4 S... [more]
A0A0A0L7052.46e-9593.06Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G199600 PE=4 SV=1[more]
A0A1S3C2Q34.07e-9491.33PRKR-interacting protein 1 OS=Cucumis melo OX=3656 GN=LOC103496186 PE=4 SV=1[more]
BLAST of Cp4.1LG01g02410 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G15270.11.5e-3960.00unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1168... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 112..146
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 63..78
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 127..142
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..17
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 81..126
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 143..162
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 63..173
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..27
IPR009548PRKR-interacting protein 1PFAMPF06658DUF1168coord: 54..170
e-value: 9.2E-28
score: 96.7
IPR009548PRKR-interacting protein 1PANTHERPTHR13507UNCHARACTERIZEDcoord: 12..172

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g02410.1Cp4.1LG01g02410.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006469 negative regulation of protein kinase activity
cellular_component GO:0005730 nucleolus
molecular_function GO:0003725 double-stranded RNA binding
molecular_function GO:0019901 protein kinase binding
molecular_function GO:0004860 protein kinase inhibitor activity