Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGAAGTGGATGGTAGTGGATGGATAGGTTGGGGGGGAAATGATGAAATCTTTGGGAATCCAGTCTCTCCATAGTTGCAGTCTCCCAAACCCATCAAATTCCAGGCGCCATATCCATTAACCCTCCTCAAATGTTGCACACCATCAACCTTCTCTCCTCCTCCAATTTCCCTCTCTCTCTCTCTCTAACCCACAGTCTCCTTCTCTCTCCTCCGCCCTTCTCCACTCTCCACCGACCCATTACCTCCCCCTCTGTTCTCCCCCTCCGAACTCAGCAATGCTTCTGCTTCCCCCAATTCTCTGAACTCTCCGCCGCCGCCGCCGCCGACGATGGCCCAATTGAACTCCCATCCACCATTTTTGCTACCACTGATGACCCTTCTTCTATCCAAGTCGCTACCAGTGTTCTCCTTACTGGGGCTATCTCCGTCTTCCTCTTTCGCTCCCTTCGCCGCCGTGCCAAGCGGGTTAAAGAGCTGGTACCCTTTACTGCATTTCTTTTTTAAGTTTTGACTCTTTGGAATACACGTTTTGTGATTGTTTTAGTCTAGGAATGAATTGGGGTTCTGCTGCTTTCTTATTCCTTTGCCTTGTTTTTTTGCACGCCATGTGTTTGAAGAAAGTCTTCATAGAAACTGCCTGCGGTTTCTAAGTTGTTCACTATAGGGTTCAACTCGGTATCAAATTTGTTATGATGTAATTGGGGTCTTATGTATTCTTAGTCTAGTGCCTAGTAGAGTAGTTAGATGAACATGCAAAATTCATTTGAAGTGGTGGCTGGCCATGGCTACCTAGATATAGGAGCTGTTTGTTCATCTGCATTGTCTTCCGGCCTCTTTTTTGACCCTCAAGGAAGTCATATCAGTTACGAAGAAGCTGAAATATTGGATGGGGACAATTGACTATGGTAGTTGTGAGATCCCACGTCAGTTGTAGAGGGGAATGAAGCATTTTTATAAGGGTGTGGAAACCTCTCCCTAACAAACGCGTTTCCAAATTGTGAGGCTGACGCCGATATGTAACGGGTCAAAGCGGACAATATCTGCTAGTAGTGAGCTTGGGCTGTTACAAATGGTATTAGAGCTAGACACTGAGCGGTGTGCCAGCGAGGACGCTGGGCCTTGAAGGGGGGTTAATTGTGAGATCCCACATCGGTTGTAGAGGGGAACGAAACATTTTTTACAAGGGTATGGAAACCTCTTCCTAACAAACACGTTTCTAAACTGTGAGGTTGTCGGCGTTACGTAGTAGGCCAAAGCGAACAATATTTGCTAGTGGTGAGTTTGGGTTATTACAAATGGTATCAAAGTTACGCACCGAGCGGTGTGCCAATAAGTACGTTGGGCCCCAAAGAGGGGTGGATTGTGAGATCTCACATCGGTTGGAGAGGAGAACAAAACATTGTTTTTTACAAGGGTGTGGAAACTTCTCCCTAACAAACGCGTTCTAAAACCATGAGGCTGACGACGATATGTAACGGACGAAAACAGACAATATCTACTATTGGTGGGTTTGGACTGTTTATGTCTTCCGGCCTCTTTTTTTCCCTCAAGGAAGTCACATCAGTTAAGAAGAAGTTGAAAATATTGGATGGGAGACAATTGATTATGGTAGAGATTTACTAATTATATGGACTGTTCATGCCTCAATGTTGAAACATCTTTGAAGGATATATTTAGATTCTGGAATCATAATATGTTGGCTGTAAGATTTGGCGGTGAGGGTGAATCAGAGAATGTTTGAATGGAACTGTCTTAGATTTGGAAAAAACAATATTCATCTTTGTCCTCTAAGCGTTCACTTTGGAGTTCTATCTTTCACTATAATTCCAATGTAATAATCATTTGCTGGGCTGCTTTCTTTTTATGAACATGATGGTTCTTTGAATTGATTTCTTTTGTTCCCATATAACAATTGGAAGTTCTATGACTTTTTGTGCCCATTTTAGAAATTCAGGTCTGCTGGAGTAAAGAAATCTCTAAAGGAGGAAGCAATGGAGAGCTTGAAAGCAATTAGTACAGGTCCAATTGAATCAAAGTCTAAACCTTCACCCATACAAACATTCTTGGGAGCTATAGCAGCCGGTGTTATTGCATTGATCTTATATAAGTTCACCACTACCATTGAAGCTGCTCTGAACCGACAGACTGTGTCCGATAACTTCTCGGTATGCTCTTGTGGTTACTTCATCCTTATATATGTTTCGATTATTTCGTTGTCATTTCTGATCTGGACAGCTAATGGTAATATGATTTGAGCTAGAAATAGTTGAACAAGTGTTGCTTGTTTTTCACTAAGAGAACTATTGGATTAATATCTTGTAAATTGCACCAATAACAAACAAGAAAATTTGAAACCTTTGTGGATTGATGTTCTGCTACTTTTCTGTTCTTTTAGGTTCGACAGCTGACGATAACGATAAGGTAACTTCCTCGCCTTGTTCTAACATATCTTGAAGTTAGATGAAACATTAGCGACCGATTCTTATCTCGTATTTGCAGAACTATCGTGAATGGAATATGCTACCTCGCGACATTTGTTTTCGGAATCAATGCTGTTGGTTTATTCCTTTACTCTGGTCAGTTGGCATTAAACTCTGTCATGGAAGAAGGTTCTGAAGATAAAGAACCTGCAACTAAAGGTGATAAGCAAGTTAGCTCGCCGAACTCAACCGTTGAAACGACCCTCGATGGCACCGAATCAAGCAGCAGCAAAGATGATCAAAGTTGAAGTAACTTGCAGTGATGGAAGAGAATCCGCATGGGTAAGATTTTGGCTGTTTTGGTTGCCATTTGTGAATGCTATCTGCTTTGATTGATAGTGCATTTTTAGTATCATCTTCTTCATTTTGAGTAGCTCTCTGTCATCTGTGATTATTATTATATGGGTATATACACAGAGAAAATATAGTCTATGATTAGGCAGCAATCTGCACAATATATTAATGCTCTGCTGACACTAAACTATGGATGAACAATGTATTTTAGCAACTGACGACCTCCCGACTTTCCTTTGCATCCCCCT
mRNA sequence
TGAAGTGGATGGTAGTGGATGGATAGGTTGGGGGGGAAATGATGAAATCTTTGGGAATCCAGTCTCTCCATAGTTGCAGTCTCCCAAACCCATCAAATTCCAGGCGCCATATCCATTAACCCTCCTCAAATGTTGCACACCATCAACCTTCTCTCCTCCTCCAATTTCCCTCTCTCTCTCTCTCTAACCCACAGTCTCCTTCTCTCTCCTCCGCCCTTCTCCACTCTCCACCGACCCATTACCTCCCCCTCTGTTCTCCCCCTCCGAACTCAGCAATGCTTCTGCTTCCCCCAATTCTCTGAACTCTCCGCCGCCGCCGCCGCCGACGATGGCCCAATTGAACTCCCATCCACCATTTTTGCTACCACTGATGACCCTTCTTCTATCCAAGTCGCTACCAGTGTTCTCCTTACTGGGGCTATCTCCGTCTTCCTCTTTCGCTCCCTTCGCCGCCGTGCCAAGCGGGTTAAAGAGCTGAAATTCAGGTCTGCTGGAGTAAAGAAATCTCTAAAGGAGGAAGCAATGGAGAGCTTGAAAGCAATTAGTACAGGTCCAATTGAATCAAAGTCTAAACCTTCACCCATACAAACATTCTTGGGAGCTATAGCAGCCGGTGTTATTGCATTGATCTTATATAAGTTCACCACTACCATTGAAGCTGCTCTGAACCGACAGACTGTGTCCGATAACTTCTCGGTTCGACAGCTGACGATAACGATAAGAACTATCGTGAATGGAATATGCTACCTCGCGACATTTGTTTTCGGAATCAATGCTGTTGGTTTATTCCTTTACTCTGGTCAGTTGGCATTAAACTCTGTCATGGAAGAAGGTTCTGAAGATAAAGAACCTGCAACTAAAGGTGATAAGCAAGTTAGCTCGCCGAACTCAACCGTTGAAACGACCCTCGATGGCACCGAATCAAGCAGCAGCAAAGATGATCAAAGTTGAAGTAACTTGCAGTGATGGAAGAGAATCCGCATGGGTAAGATTTTGGCTGTTTTGGTTGCCATTTGTGAATGCTATCTGCTTTGATTGATAGTGCATTTTTAGTATCATCTTCTTCATTTTGAGTAGCTCTCTGTCATCTGTGATTATTATTATATGGGTATATACACAGAGAAAATATAGTCTATGATTAGGCAGCAATCTGCACAATATATTAATGCTCTGCTGACACTAAACTATGGATGAACAATGTATTTTAGCAACTGACGACCTCCCGACTTTCCTTTGCATCCCCCT
Coding sequence (CDS)
ATGTTGCACACCATCAACCTTCTCTCCTCCTCCAATTTCCCTCTCTCTCTCTCTCTAACCCACAGTCTCCTTCTCTCTCCTCCGCCCTTCTCCACTCTCCACCGACCCATTACCTCCCCCTCTGTTCTCCCCCTCCGAACTCAGCAATGCTTCTGCTTCCCCCAATTCTCTGAACTCTCCGCCGCCGCCGCCGCCGACGATGGCCCAATTGAACTCCCATCCACCATTTTTGCTACCACTGATGACCCTTCTTCTATCCAAGTCGCTACCAGTGTTCTCCTTACTGGGGCTATCTCCGTCTTCCTCTTTCGCTCCCTTCGCCGCCGTGCCAAGCGGGTTAAAGAGCTGAAATTCAGGTCTGCTGGAGTAAAGAAATCTCTAAAGGAGGAAGCAATGGAGAGCTTGAAAGCAATTAGTACAGGTCCAATTGAATCAAAGTCTAAACCTTCACCCATACAAACATTCTTGGGAGCTATAGCAGCCGGTGTTATTGCATTGATCTTATATAAGTTCACCACTACCATTGAAGCTGCTCTGAACCGACAGACTGTGTCCGATAACTTCTCGGTTCGACAGCTGACGATAACGATAAGAACTATCGTGAATGGAATATGCTACCTCGCGACATTTGTTTTCGGAATCAATGCTGTTGGTTTATTCCTTTACTCTGGTCAGTTGGCATTAAACTCTGTCATGGAAGAAGGTTCTGAAGATAAAGAACCTGCAACTAAAGGTGATAAGCAAGTTAGCTCGCCGAACTCAACCGTTGAAACGACCCTCGATGGCACCGAATCAAGCAGCAGCAAAGATGATCAAAGTTGA
Protein sequence
MLHTINLLSSSNFPLSLSLTHSLLLSPPPFSTLHRPITSPSVLPLRTQQCFCFPQFSELSAAAAADDGPIELPSTIFATTDDPSSIQVATSVLLTGAISVFLFRSLRRRAKRVKELKFRSAGVKKSLKEEAMESLKAISTGPIESKSKPSPIQTFLGAIAAGVIALILYKFTTTIEAALNRQTVSDNFSVRQLTITIRTIVNGICYLATFVFGINAVGLFLYSGQLALNSVMEEGSEDKEPATKGDKQVSSPNSTVETTLDGTESSSSKDDQS
Homology
BLAST of Cp4.1LG01g01740 vs. NCBI nr
Match:
XP_023535820.1 (uncharacterized protein LOC111797135 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 499 bits (1285), Expect = 2.32e-177
Identity = 273/273 (100.00%), Postives = 273/273 (100.00%), Query Frame = 0
Query: 1 MLHTINLLSSSNFPLSLSLTHSLLLSPPPFSTLHRPITSPSVLPLRTQQCFCFPQFSELS 60
MLHTINLLSSSNFPLSLSLTHSLLLSPPPFSTLHRPITSPSVLPLRTQQCFCFPQFSELS
Sbjct: 1 MLHTINLLSSSNFPLSLSLTHSLLLSPPPFSTLHRPITSPSVLPLRTQQCFCFPQFSELS 60
Query: 61 AAAAADDGPIELPSTIFATTDDPSSIQVATSVLLTGAISVFLFRSLRRRAKRVKELKFRS 120
AAAAADDGPIELPSTIFATTDDPSSIQVATSVLLTGAISVFLFRSLRRRAKRVKELKFRS
Sbjct: 61 AAAAADDGPIELPSTIFATTDDPSSIQVATSVLLTGAISVFLFRSLRRRAKRVKELKFRS 120
Query: 121 AGVKKSLKEEAMESLKAISTGPIESKSKPSPIQTFLGAIAAGVIALILYKFTTTIEAALN 180
AGVKKSLKEEAMESLKAISTGPIESKSKPSPIQTFLGAIAAGVIALILYKFTTTIEAALN
Sbjct: 121 AGVKKSLKEEAMESLKAISTGPIESKSKPSPIQTFLGAIAAGVIALILYKFTTTIEAALN 180
Query: 181 RQTVSDNFSVRQLTITIRTIVNGICYLATFVFGINAVGLFLYSGQLALNSVMEEGSEDKE 240
RQTVSDNFSVRQLTITIRTIVNGICYLATFVFGINAVGLFLYSGQLALNSVMEEGSEDKE
Sbjct: 181 RQTVSDNFSVRQLTITIRTIVNGICYLATFVFGINAVGLFLYSGQLALNSVMEEGSEDKE 240
Query: 241 PATKGDKQVSSPNSTVETTLDGTESSSSKDDQS 273
PATKGDKQVSSPNSTVETTLDGTESSSSKDDQS
Sbjct: 241 PATKGDKQVSSPNSTVETTLDGTESSSSKDDQS 273
BLAST of Cp4.1LG01g01740 vs. NCBI nr
Match:
KAG6600385.1 (hypothetical protein SDJN03_05618, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 469 bits (1208), Expect = 1.45e-165
Identity = 261/277 (94.22%), Postives = 267/277 (96.39%), Query Frame = 0
Query: 1 MLHTINLLSSSNFPLSLSLTHSLLLSPPPFSTLHRPITSP-SVLPLRTQQCFCFPQFSEL 60
MLHTINLLSSSNFPLSLSLTH+LLLSPPPFS+LHRPITSP SV PLRT QCFCFPQFSEL
Sbjct: 1 MLHTINLLSSSNFPLSLSLTHNLLLSPPPFSSLHRPITSPPSVPPLRTHQCFCFPQFSEL 60
Query: 61 SAAAAA---DDGPIELPSTIFATTDDPSSIQVATSVLLTGAISVFLFRSLRRRAKRVKEL 120
S AAA+ DDGPIELPSTIFATTDDPSSIQVATSVLLTGAISVFLFRSLRRRAKRVKEL
Sbjct: 61 SDAAASFPDDDGPIELPSTIFATTDDPSSIQVATSVLLTGAISVFLFRSLRRRAKRVKEL 120
Query: 121 KFRSAGVKKSLKEEAMESLKAISTGPIESKSKPSPIQTFLGAIAAGVIALILYKFTTTIE 180
KFRSAGVKKSLKEEAMESLKAISTGPI+SKSKPSP+Q FLGAIAAGVIALILYKFTTTIE
Sbjct: 121 KFRSAGVKKSLKEEAMESLKAISTGPIQSKSKPSPVQAFLGAIAAGVIALILYKFTTTIE 180
Query: 181 AALNRQTVSDNFSVRQLTITIRTIVNGICYLATFVFGINAVGLFLYSGQLALNSVMEEGS 240
AALNRQTVSDNFSVRQLTITIRTIVNGICYLATFVFGINAVGLFLYSGQLALNS+MEEGS
Sbjct: 181 AALNRQTVSDNFSVRQLTITIRTIVNGICYLATFVFGINAVGLFLYSGQLALNSIMEEGS 240
Query: 241 EDKEPATKGDKQVSSPNSTVETTLDGTESSSSKDDQS 273
E KEPATKGDKQVSSPNSTVE TLDGTESSSSKDDQS
Sbjct: 241 EGKEPATKGDKQVSSPNSTVEMTLDGTESSSSKDDQS 277
BLAST of Cp4.1LG01g01740 vs. NCBI nr
Match:
KAG7031048.1 (hypothetical protein SDJN02_05087, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 458 bits (1178), Expect = 1.33e-160
Identity = 262/302 (86.75%), Postives = 268/302 (88.74%), Query Frame = 0
Query: 1 MLHTINLLSSSNFPLSLSLTHSLLLSPPPFSTLHRPITSP-SVLPLRTQQCFCFPQFSEL 60
MLHTINLLSSSNFPLSLSLTH+LLLSPPPFS+LHRPITSP SV PLRT QCFCFPQFSEL
Sbjct: 1 MLHTINLLSSSNFPLSLSLTHNLLLSPPPFSSLHRPITSPPSVPPLRTHQCFCFPQFSEL 60
Query: 61 SAAAAA---DDGPIELPSTIFATTDDPSSIQVATSVLLTGAISVFLFRSLRRRAKRVKEL 120
S AAA+ DDGPIELPSTIFATTDDPSSIQVATSVLLTGAISVFLFRSLRRRAKRVKEL
Sbjct: 61 SDAAASFPDDDGPIELPSTIFATTDDPSSIQVATSVLLTGAISVFLFRSLRRRAKRVKEL 120
Query: 121 KFRSAGVKKSLKEEAMESLKAISTGPIESKSKPSPIQTFLGAIAAGVIALILYKFTTTIE 180
KFRSAGVKKSLKEEAMESLKAISTGPI+SKSKPSP+Q FLGAIAAGVIALILYKFTTTIE
Sbjct: 121 KFRSAGVKKSLKEEAMESLKAISTGPIQSKSKPSPVQAFLGAIAAGVIALILYKFTTTIE 180
Query: 181 AALNRQTVSDNFSV-------------------------RQLTITIRTIVNGICYLATFV 240
AALNRQTVSDNFSV RQLTITIRTIVNGICYLATFV
Sbjct: 181 AALNRQTVSDNFSVHSRGYFILIFVLIISLSFSSGQLMVRQLTITIRTIVNGICYLATFV 240
Query: 241 FGINAVGLFLYSGQLALNSVMEEGSEDKEPATKGDKQVSSPNSTVETTLDGTESSSSKDD 273
FGINAVGLFLYSGQLALNS+MEEGSE KEPATKGDKQVSSPNSTVETTLDGTESSSSKDD
Sbjct: 241 FGINAVGLFLYSGQLALNSIMEEGSEGKEPATKGDKQVSSPNSTVETTLDGTESSSSKDD 300
BLAST of Cp4.1LG01g01740 vs. NCBI nr
Match:
XP_038905614.1 (uncharacterized protein LOC120091579 [Benincasa hispida])
HSP 1 Score: 397 bits (1020), Expect = 8.49e-137
Identity = 230/282 (81.56%), Postives = 244/282 (86.52%), Query Frame = 0
Query: 1 MLHTINLLSSSNFP---LSLSLTHSLLLSPPPFST-----LHRPITSPSVLPLRTQQCFC 60
ML T NLLSS NFP LSL+ H L LSPP S+ LHRPI SV PL T FC
Sbjct: 1 MLQTQNLLSS-NFPFFTLSLTHNHKLFLSPPTHSSSSSSSLHRPIAFHSVSPLTTHHSFC 60
Query: 61 FPQFSELSAAAAADD-GPIELPSTIFATTDDPSSIQVATSVLLTGAISVFLFRSLRRRAK 120
PQFSEL+ A DD GP+ELPSTIFATTDDPSS+QVATSVLLTGAISVFLFRSLRRRAK
Sbjct: 61 LPQFSELADATFLDDNGPVELPSTIFATTDDPSSLQVATSVLLTGAISVFLFRSLRRRAK 120
Query: 121 RVKELKFRSAGVKKSLKEEAMESLKAISTGPIESKSKPSPIQTFLGAIAAGVIALILYKF 180
RVKELKFRSAGVKKSLKEEAM+SLKAISTGPIESKS PSPIQ FLGAIAAGVIA+ILYKF
Sbjct: 121 RVKELKFRSAGVKKSLKEEAMDSLKAISTGPIESKSTPSPIQAFLGAIAAGVIAVILYKF 180
Query: 181 TTTIEAALNRQTVSDNFSVRQLTITIRTIVNGICYLATFVFGINAVGLFLYSGQLALNSV 240
TTTIEAALNRQTVSDNFSVRQLTITIRTIVNG+CYLATFVFGINA+GLFLYSGQLA+NSV
Sbjct: 181 TTTIEAALNRQTVSDNFSVRQLTITIRTIVNGLCYLATFVFGINAIGLFLYSGQLAMNSV 240
Query: 241 MEEGSEDKEPATKGDKQVSSPNSTVETTLDGTESSSSKDDQS 273
MEEGS+DKEP KGDKQVS PNST ETTL+ TESS+S+DDQS
Sbjct: 241 MEEGSKDKEPKGKGDKQVSPPNSTAETTLNSTESSNSEDDQS 281
BLAST of Cp4.1LG01g01740 vs. NCBI nr
Match:
TYK11253.1 (DUF3082 domain-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 392 bits (1006), Expect = 9.96e-135
Identity = 226/279 (81.00%), Postives = 243/279 (87.10%), Query Frame = 0
Query: 1 MLHTINLLSSSNFPL-SLS---LTHSLLLSPPP-FSTLHRPITSPSVLPLRTQQCFCFPQ 60
M HT NLLSS NFPL +LS H L LSPP S+LHRPIT S+ PL T +CFC PQ
Sbjct: 1 MWHTQNLLSS-NFPLFTLSPPTYNHKLFLSPPTTLSSLHRPITFHSISPLTTHRCFCLPQ 60
Query: 61 FSELSAAAAADD-GPIELPSTIFATTDDPSSIQVATSVLLTGAISVFLFRSLRRRAKRVK 120
F++L+ A DD GP+ELP TIFATTD+PSS+QVATSVLLTGAISVFLFRSLRRRAKRVK
Sbjct: 61 FTDLADATFLDDNGPVELPPTIFATTDNPSSLQVATSVLLTGAISVFLFRSLRRRAKRVK 120
Query: 121 ELKFRSAGVKKSLKEEAMESLKAISTGPIESKSKPSPIQTFLGAIAAGVIALILYKFTTT 180
ELKFRSAGVKKSLKEEAM+SLKAISTGPI SKS PSPIQ FLGAIAAGVIALILYKFTTT
Sbjct: 121 ELKFRSAGVKKSLKEEAMDSLKAISTGPIASKSTPSPIQAFLGAIAAGVIALILYKFTTT 180
Query: 181 IEAALNRQTVSDNFSVRQLTITIRTIVNGICYLATFVFGINAVGLFLYSGQLALNSVMEE 240
IEAALNRQTVSDNFSVRQLTITIRTIVNG+CYLATFVFGINA+GLFLYSGQLA+NSVMEE
Sbjct: 181 IEAALNRQTVSDNFSVRQLTITIRTIVNGLCYLATFVFGINAIGLFLYSGQLAMNSVMEE 240
Query: 241 GSEDKEPATKGDKQVSSPNSTVETTLDGTESSSSKDDQS 273
GS+DKEP K D+QVS P ST ETTLD TESS+SKDDQS
Sbjct: 241 GSKDKEPKAKRDEQVSPPTSTAETTLDSTESSNSKDDQS 278
BLAST of Cp4.1LG01g01740 vs. ExPASy TrEMBL
Match:
A0A5D3CH90 (DUF3082 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold227G001090 PE=4 SV=1)
HSP 1 Score: 392 bits (1006), Expect = 4.82e-135
Identity = 226/279 (81.00%), Postives = 243/279 (87.10%), Query Frame = 0
Query: 1 MLHTINLLSSSNFPL-SLS---LTHSLLLSPPP-FSTLHRPITSPSVLPLRTQQCFCFPQ 60
M HT NLLSS NFPL +LS H L LSPP S+LHRPIT S+ PL T +CFC PQ
Sbjct: 1 MWHTQNLLSS-NFPLFTLSPPTYNHKLFLSPPTTLSSLHRPITFHSISPLTTHRCFCLPQ 60
Query: 61 FSELSAAAAADD-GPIELPSTIFATTDDPSSIQVATSVLLTGAISVFLFRSLRRRAKRVK 120
F++L+ A DD GP+ELP TIFATTD+PSS+QVATSVLLTGAISVFLFRSLRRRAKRVK
Sbjct: 61 FTDLADATFLDDNGPVELPPTIFATTDNPSSLQVATSVLLTGAISVFLFRSLRRRAKRVK 120
Query: 121 ELKFRSAGVKKSLKEEAMESLKAISTGPIESKSKPSPIQTFLGAIAAGVIALILYKFTTT 180
ELKFRSAGVKKSLKEEAM+SLKAISTGPI SKS PSPIQ FLGAIAAGVIALILYKFTTT
Sbjct: 121 ELKFRSAGVKKSLKEEAMDSLKAISTGPIASKSTPSPIQAFLGAIAAGVIALILYKFTTT 180
Query: 181 IEAALNRQTVSDNFSVRQLTITIRTIVNGICYLATFVFGINAVGLFLYSGQLALNSVMEE 240
IEAALNRQTVSDNFSVRQLTITIRTIVNG+CYLATFVFGINA+GLFLYSGQLA+NSVMEE
Sbjct: 181 IEAALNRQTVSDNFSVRQLTITIRTIVNGLCYLATFVFGINAIGLFLYSGQLAMNSVMEE 240
Query: 241 GSEDKEPATKGDKQVSSPNSTVETTLDGTESSSSKDDQS 273
GS+DKEP K D+QVS P ST ETTLD TESS+SKDDQS
Sbjct: 241 GSKDKEPKAKRDEQVSPPTSTAETTLDSTESSNSKDDQS 278
BLAST of Cp4.1LG01g01740 vs. ExPASy TrEMBL
Match:
A0A6J1CM21 (uncharacterized protein LOC111012858 OS=Momordica charantia OX=3673 GN=LOC111012858 PE=4 SV=1)
HSP 1 Score: 383 bits (983), Expect = 1.47e-131
Identity = 223/279 (79.93%), Postives = 238/279 (85.30%), Query Frame = 0
Query: 1 MLHTINLLSSSNFPLSLSLTHSLLLSPPPFSTLHRPITSPSVLP---LRTQQCFCFPQFS 60
ML T N LSS FP +LSLTH LSPP S+LHRPIT P + LR QQC PQ S
Sbjct: 1 MLQTHNFLSSI-FPSTLSLTHKSCLSPPSLSSLHRPITFPFLSTHRRLRIQQCS--PQIS 60
Query: 61 ELSAAAAA---DDGPIELPSTIFATTDDPSSIQVATSVLLTGAISVFLFRSLRRRAKRVK 120
ELS A A DDGP+ELP TIFATTDDPSS+QVATSVLLTGAIS+FLFRSLRRRA+R K
Sbjct: 61 ELSEATATFDEDDGPVELPPTIFATTDDPSSLQVATSVLLTGAISIFLFRSLRRRARRAK 120
Query: 121 ELKFRSAGVKKSLKEEAMESLKAISTGPIESKSKPSPIQTFLGAIAAGVIALILYKFTTT 180
ELKFRS GVKKSLKEEA++SLKAISTGPIESKS PSPIQ FLGAIAAGVIALILYKFTTT
Sbjct: 121 ELKFRSVGVKKSLKEEALDSLKAISTGPIESKSTPSPIQAFLGAIAAGVIALILYKFTTT 180
Query: 181 IEAALNRQTVSDNFSVRQLTITIRTIVNGICYLATFVFGINAVGLFLYSGQLALNSVMEE 240
IEAALNRQT+SDNFSVRQ+TITIRTIVNGICYLATFVFGINAVGLFLYSGQLA+NS+ME+
Sbjct: 181 IEAALNRQTMSDNFSVRQMTITIRTIVNGICYLATFVFGINAVGLFLYSGQLAVNSIMED 240
Query: 241 GSEDKEPATKGDKQVSSPNSTVETTLDGTESSSSKDDQS 273
GS DKE AT DKQVS PNSTVET LD TESSS+KDDQS
Sbjct: 241 GSTDKETATIVDKQVSPPNSTVETALDSTESSSNKDDQS 276
BLAST of Cp4.1LG01g01740 vs. ExPASy TrEMBL
Match:
A0A1S4E0Y7 (LOW QUALITY PROTEIN: uncharacterized protein LOC103496210 OS=Cucumis melo OX=3656 GN=LOC103496210 PE=4 SV=1)
HSP 1 Score: 387 bits (995), Expect = 3.51e-127
Identity = 224/279 (80.29%), Postives = 242/279 (86.74%), Query Frame = 0
Query: 1 MLHTINLLSSSNFPL-SLS---LTHSLLLSPPP-FSTLHRPITSPSVLPLRTQQCFCFPQ 60
M HT NLLSS N PL +LS H L LSPP S+LHRPIT S+ PL T +CFC PQ
Sbjct: 457 MWHTQNLLSS-NLPLFTLSPPTYNHKLFLSPPTTLSSLHRPITFHSISPLTTHRCFCLPQ 516
Query: 61 FSELSAAAAADD-GPIELPSTIFATTDDPSSIQVATSVLLTGAISVFLFRSLRRRAKRVK 120
F++L+ A DD GP+ELP TIFATTD+PSS+QVATSVLLTGAISVFLFRSLRRRAKRVK
Sbjct: 517 FTDLADATFLDDNGPVELPPTIFATTDNPSSLQVATSVLLTGAISVFLFRSLRRRAKRVK 576
Query: 121 ELKFRSAGVKKSLKEEAMESLKAISTGPIESKSKPSPIQTFLGAIAAGVIALILYKFTTT 180
ELKFRSAGVKKSLKEEAM+SLKAISTGPI SKS PSPIQ FLGAIAAGVIALILYKFTTT
Sbjct: 577 ELKFRSAGVKKSLKEEAMDSLKAISTGPIASKSTPSPIQAFLGAIAAGVIALILYKFTTT 636
Query: 181 IEAALNRQTVSDNFSVRQLTITIRTIVNGICYLATFVFGINAVGLFLYSGQLALNSVMEE 240
IEAALNRQTVSDNFSVRQLTITIRTIVNG+CYLATFVFGINA+GLFLYSGQLA+NSVMEE
Sbjct: 637 IEAALNRQTVSDNFSVRQLTITIRTIVNGLCYLATFVFGINAIGLFLYSGQLAMNSVMEE 696
Query: 241 GSEDKEPATKGDKQVSSPNSTVETTLDGTESSSSKDDQS 273
GS+DKEP K D+QVS P ST ETTL+ TESS+SKDDQS
Sbjct: 697 GSKDKEPKAKRDEQVSPPTSTAETTLNSTESSNSKDDQS 734
BLAST of Cp4.1LG01g01740 vs. ExPASy TrEMBL
Match:
A0A5A7UXD2 (DUF3082 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold803G00340 PE=4 SV=1)
HSP 1 Score: 387 bits (995), Expect = 2.63e-126
Identity = 224/279 (80.29%), Postives = 242/279 (86.74%), Query Frame = 0
Query: 1 MLHTINLLSSSNFPL-SLS---LTHSLLLSPPP-FSTLHRPITSPSVLPLRTQQCFCFPQ 60
M HT NLLSS N PL +LS H L LSPP S+LHRPIT S+ PL T +CFC PQ
Sbjct: 535 MWHTQNLLSS-NLPLFTLSPPTYNHKLFLSPPTTLSSLHRPITFHSISPLTTHRCFCLPQ 594
Query: 61 FSELSAAAAADD-GPIELPSTIFATTDDPSSIQVATSVLLTGAISVFLFRSLRRRAKRVK 120
F++L+ A DD GP+ELP TIFATTD+PSS+QVATSVLLTGAISVFLFRSLRRRAKRVK
Sbjct: 595 FTDLADATFLDDNGPVELPPTIFATTDNPSSLQVATSVLLTGAISVFLFRSLRRRAKRVK 654
Query: 121 ELKFRSAGVKKSLKEEAMESLKAISTGPIESKSKPSPIQTFLGAIAAGVIALILYKFTTT 180
ELKFRSAGVKKSLKEEAM+SLKAISTGPI SKS PSPIQ FLGAIAAGVIALILYKFTTT
Sbjct: 655 ELKFRSAGVKKSLKEEAMDSLKAISTGPIASKSTPSPIQAFLGAIAAGVIALILYKFTTT 714
Query: 181 IEAALNRQTVSDNFSVRQLTITIRTIVNGICYLATFVFGINAVGLFLYSGQLALNSVMEE 240
IEAALNRQTVSDNFSVRQLTITIRTIVNG+CYLATFVFGINA+GLFLYSGQLA+NSVMEE
Sbjct: 715 IEAALNRQTVSDNFSVRQLTITIRTIVNGLCYLATFVFGINAIGLFLYSGQLAMNSVMEE 774
Query: 241 GSEDKEPATKGDKQVSSPNSTVETTLDGTESSSSKDDQS 273
GS+DKEP K D+QVS P ST ETTL+ TESS+SKDDQS
Sbjct: 775 GSKDKEPKAKRDEQVSPPTSTAETTLNSTESSNSKDDQS 812
BLAST of Cp4.1LG01g01740 vs. ExPASy TrEMBL
Match:
A0A5N6RX82 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_020622 PE=4 SV=1)
HSP 1 Score: 293 bits (749), Expect = 5.81e-96
Identity = 173/270 (64.07%), Postives = 213/270 (78.89%), Query Frame = 0
Query: 10 SSNFPLSLSLTH-SLLLSPPPFSTLHRPITSPSVLPL-RTQQCFCFPQFSELSAAAAADD 69
S+N P++LS H S + S P +RP T VL L R + + E ++A A ++
Sbjct: 11 STNIPVALSHLHNSSVFSSPVIYFPYRPTTLRHVLALPRARPETWLAEVPEPTSAPALEE 70
Query: 70 GPIELPST---IFATTDDPSSIQVATSVLLTGAISVFLFRSLRRRAKRVKELKFRSAGVK 129
GPIELP + IFATTDDP+ IQVATSVLLTGAISVFLFR++RRRA+R KELKFRS GVK
Sbjct: 71 GPIELPPSTPSIFATTDDPAPIQVATSVLLTGAISVFLFRAVRRRARRAKELKFRSDGVK 130
Query: 130 KSLKEEAMESLKAISTGPIESKSKPSPIQTFLGAIAAGVIALILYKFTTTIEAALNRQTV 189
KSLKE+AM+SL+A+++ P+E+ S PSP+Q FLG +AAGVIALILYKFTTTIEAALNRQT+
Sbjct: 131 KSLKEDAMDSLRAMASAPVEANSPPSPVQAFLGGVAAGVIALILYKFTTTIEAALNRQTI 190
Query: 190 SDNFSVRQLTITIRTIVNGICYLATFVFGINAVGLFLYSGQLALNSVMEEGSEDKEPATK 249
SDN SVRQ+T+TIRTIVNG+CYLATF+FGIN+ GLFLYSGQL +NS+ME GS ++E +K
Sbjct: 191 SDNLSVRQITVTIRTIVNGLCYLATFIFGINSFGLFLYSGQLGINSLME-GSTNEENKSK 250
Query: 250 GD-KQVSSPNSTVETTLDGTESSSSKDDQS 273
GD +Q+ SPNST E+ D TE SSSK DQS
Sbjct: 251 GDDQQLGSPNSTAESATDSTEVSSSKADQS 279
BLAST of Cp4.1LG01g01740 vs. TAIR 10
Match:
AT3G15110.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3082 (InterPro:IPR021434); Has 77 Blast hits to 77 proteins in 38 species: Archae - 0; Bacteria - 37; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). )
HSP 1 Score: 229.6 bits (584), Expect = 3.1e-60
Identity = 138/223 (61.88%), Postives = 165/223 (73.99%), Query Frame = 0
Query: 62 AAAADDGPIELP----------STIFATTDDPSSIQVATSVLLTGAISVFLFRSLRRRAK 121
A +DGPIELP ++IFAT+DDP+ +Q+ATSVLLTGAI+VFL RS+RRRAK
Sbjct: 52 AEVEEDGPIELPTSSTSPFSSTNSIFATSDDPTPLQLATSVLLTGAITVFLIRSVRRRAK 111
Query: 122 RVKELKFRSAGVKKSLKEEAMESLKAISTGPIE-SKSKPSPIQTFLGAIAAGVIALILYK 181
R KEL FRS G KKSLKEEAM++LKA+S+ PIE S PS Q FLGAIAAGVIALILYK
Sbjct: 112 RAKELTFRSTGAKKSLKEEAMDNLKALSSTPIEGGNSTPSAAQAFLGAIAAGVIALILYK 171
Query: 182 FTTTIEAALNRQTVSDNFSVRQLTITIRTIVNGICYLATFVFGINAVGLFLYSGQLALNS 241
FT T+E+ LNRQT+SDNFSVRQ+T+T+RTI+NGICYLATFVFG+NA GL LYSGQLA N
Sbjct: 172 FTVTVESGLNRQTISDNFSVRQITVTVRTIINGICYLATFVFGLNAFGLLLYSGQLAFN- 231
Query: 242 VMEEGSEDKEPATKGDKQVSSPNSTVETTLDGTESSSSKDDQS 274
E+ +E+ AT SS D +E + S +DQS
Sbjct: 232 --EDSAEENMKATTQPGDSSSG--------DNSEVNKSNEDQS 263
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
XP_023535820.1 | 2.32e-177 | 100.00 | uncharacterized protein LOC111797135 [Cucurbita pepo subsp. pepo] | [more] |
KAG6600385.1 | 1.45e-165 | 94.22 | hypothetical protein SDJN03_05618, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KAG7031048.1 | 1.33e-160 | 86.75 | hypothetical protein SDJN02_05087, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
XP_038905614.1 | 8.49e-137 | 81.56 | uncharacterized protein LOC120091579 [Benincasa hispida] | [more] |
TYK11253.1 | 9.96e-135 | 81.00 | DUF3082 domain-containing protein [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |
A0A5D3CH90 | 4.82e-135 | 81.00 | DUF3082 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... | [more] |
A0A6J1CM21 | 1.47e-131 | 79.93 | uncharacterized protein LOC111012858 OS=Momordica charantia OX=3673 GN=LOC111012... | [more] |
A0A1S4E0Y7 | 3.51e-127 | 80.29 | LOW QUALITY PROTEIN: uncharacterized protein LOC103496210 OS=Cucumis melo OX=365... | [more] |
A0A5A7UXD2 | 2.63e-126 | 80.29 | DUF3082 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... | [more] |
A0A5N6RX82 | 5.81e-96 | 64.07 | Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_020622 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
AT3G15110.1 | 3.1e-60 | 61.88 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... | [more] |