Cp4.1LG01g01740 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG01g01740
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionDUF3082 domain-containing protein
LocationCp4.1LG01: 2874334 .. 2877355 (+)
RNA-Seq ExpressionCp4.1LG01g01740
SyntenyCp4.1LG01g01740
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGAAGTGGATGGTAGTGGATGGATAGGTTGGGGGGGAAATGATGAAATCTTTGGGAATCCAGTCTCTCCATAGTTGCAGTCTCCCAAACCCATCAAATTCCAGGCGCCATATCCATTAACCCTCCTCAAATGTTGCACACCATCAACCTTCTCTCCTCCTCCAATTTCCCTCTCTCTCTCTCTCTAACCCACAGTCTCCTTCTCTCTCCTCCGCCCTTCTCCACTCTCCACCGACCCATTACCTCCCCCTCTGTTCTCCCCCTCCGAACTCAGCAATGCTTCTGCTTCCCCCAATTCTCTGAACTCTCCGCCGCCGCCGCCGCCGACGATGGCCCAATTGAACTCCCATCCACCATTTTTGCTACCACTGATGACCCTTCTTCTATCCAAGTCGCTACCAGTGTTCTCCTTACTGGGGCTATCTCCGTCTTCCTCTTTCGCTCCCTTCGCCGCCGTGCCAAGCGGGTTAAAGAGCTGGTACCCTTTACTGCATTTCTTTTTTAAGTTTTGACTCTTTGGAATACACGTTTTGTGATTGTTTTAGTCTAGGAATGAATTGGGGTTCTGCTGCTTTCTTATTCCTTTGCCTTGTTTTTTTGCACGCCATGTGTTTGAAGAAAGTCTTCATAGAAACTGCCTGCGGTTTCTAAGTTGTTCACTATAGGGTTCAACTCGGTATCAAATTTGTTATGATGTAATTGGGGTCTTATGTATTCTTAGTCTAGTGCCTAGTAGAGTAGTTAGATGAACATGCAAAATTCATTTGAAGTGGTGGCTGGCCATGGCTACCTAGATATAGGAGCTGTTTGTTCATCTGCATTGTCTTCCGGCCTCTTTTTTGACCCTCAAGGAAGTCATATCAGTTACGAAGAAGCTGAAATATTGGATGGGGACAATTGACTATGGTAGTTGTGAGATCCCACGTCAGTTGTAGAGGGGAATGAAGCATTTTTATAAGGGTGTGGAAACCTCTCCCTAACAAACGCGTTTCCAAATTGTGAGGCTGACGCCGATATGTAACGGGTCAAAGCGGACAATATCTGCTAGTAGTGAGCTTGGGCTGTTACAAATGGTATTAGAGCTAGACACTGAGCGGTGTGCCAGCGAGGACGCTGGGCCTTGAAGGGGGGTTAATTGTGAGATCCCACATCGGTTGTAGAGGGGAACGAAACATTTTTTACAAGGGTATGGAAACCTCTTCCTAACAAACACGTTTCTAAACTGTGAGGTTGTCGGCGTTACGTAGTAGGCCAAAGCGAACAATATTTGCTAGTGGTGAGTTTGGGTTATTACAAATGGTATCAAAGTTACGCACCGAGCGGTGTGCCAATAAGTACGTTGGGCCCCAAAGAGGGGTGGATTGTGAGATCTCACATCGGTTGGAGAGGAGAACAAAACATTGTTTTTTACAAGGGTGTGGAAACTTCTCCCTAACAAACGCGTTCTAAAACCATGAGGCTGACGACGATATGTAACGGACGAAAACAGACAATATCTACTATTGGTGGGTTTGGACTGTTTATGTCTTCCGGCCTCTTTTTTTCCCTCAAGGAAGTCACATCAGTTAAGAAGAAGTTGAAAATATTGGATGGGAGACAATTGATTATGGTAGAGATTTACTAATTATATGGACTGTTCATGCCTCAATGTTGAAACATCTTTGAAGGATATATTTAGATTCTGGAATCATAATATGTTGGCTGTAAGATTTGGCGGTGAGGGTGAATCAGAGAATGTTTGAATGGAACTGTCTTAGATTTGGAAAAAACAATATTCATCTTTGTCCTCTAAGCGTTCACTTTGGAGTTCTATCTTTCACTATAATTCCAATGTAATAATCATTTGCTGGGCTGCTTTCTTTTTATGAACATGATGGTTCTTTGAATTGATTTCTTTTGTTCCCATATAACAATTGGAAGTTCTATGACTTTTTGTGCCCATTTTAGAAATTCAGGTCTGCTGGAGTAAAGAAATCTCTAAAGGAGGAAGCAATGGAGAGCTTGAAAGCAATTAGTACAGGTCCAATTGAATCAAAGTCTAAACCTTCACCCATACAAACATTCTTGGGAGCTATAGCAGCCGGTGTTATTGCATTGATCTTATATAAGTTCACCACTACCATTGAAGCTGCTCTGAACCGACAGACTGTGTCCGATAACTTCTCGGTATGCTCTTGTGGTTACTTCATCCTTATATATGTTTCGATTATTTCGTTGTCATTTCTGATCTGGACAGCTAATGGTAATATGATTTGAGCTAGAAATAGTTGAACAAGTGTTGCTTGTTTTTCACTAAGAGAACTATTGGATTAATATCTTGTAAATTGCACCAATAACAAACAAGAAAATTTGAAACCTTTGTGGATTGATGTTCTGCTACTTTTCTGTTCTTTTAGGTTCGACAGCTGACGATAACGATAAGGTAACTTCCTCGCCTTGTTCTAACATATCTTGAAGTTAGATGAAACATTAGCGACCGATTCTTATCTCGTATTTGCAGAACTATCGTGAATGGAATATGCTACCTCGCGACATTTGTTTTCGGAATCAATGCTGTTGGTTTATTCCTTTACTCTGGTCAGTTGGCATTAAACTCTGTCATGGAAGAAGGTTCTGAAGATAAAGAACCTGCAACTAAAGGTGATAAGCAAGTTAGCTCGCCGAACTCAACCGTTGAAACGACCCTCGATGGCACCGAATCAAGCAGCAGCAAAGATGATCAAAGTTGAAGTAACTTGCAGTGATGGAAGAGAATCCGCATGGGTAAGATTTTGGCTGTTTTGGTTGCCATTTGTGAATGCTATCTGCTTTGATTGATAGTGCATTTTTAGTATCATCTTCTTCATTTTGAGTAGCTCTCTGTCATCTGTGATTATTATTATATGGGTATATACACAGAGAAAATATAGTCTATGATTAGGCAGCAATCTGCACAATATATTAATGCTCTGCTGACACTAAACTATGGATGAACAATGTATTTTAGCAACTGACGACCTCCCGACTTTCCTTTGCATCCCCCT

mRNA sequence

TGAAGTGGATGGTAGTGGATGGATAGGTTGGGGGGGAAATGATGAAATCTTTGGGAATCCAGTCTCTCCATAGTTGCAGTCTCCCAAACCCATCAAATTCCAGGCGCCATATCCATTAACCCTCCTCAAATGTTGCACACCATCAACCTTCTCTCCTCCTCCAATTTCCCTCTCTCTCTCTCTCTAACCCACAGTCTCCTTCTCTCTCCTCCGCCCTTCTCCACTCTCCACCGACCCATTACCTCCCCCTCTGTTCTCCCCCTCCGAACTCAGCAATGCTTCTGCTTCCCCCAATTCTCTGAACTCTCCGCCGCCGCCGCCGCCGACGATGGCCCAATTGAACTCCCATCCACCATTTTTGCTACCACTGATGACCCTTCTTCTATCCAAGTCGCTACCAGTGTTCTCCTTACTGGGGCTATCTCCGTCTTCCTCTTTCGCTCCCTTCGCCGCCGTGCCAAGCGGGTTAAAGAGCTGAAATTCAGGTCTGCTGGAGTAAAGAAATCTCTAAAGGAGGAAGCAATGGAGAGCTTGAAAGCAATTAGTACAGGTCCAATTGAATCAAAGTCTAAACCTTCACCCATACAAACATTCTTGGGAGCTATAGCAGCCGGTGTTATTGCATTGATCTTATATAAGTTCACCACTACCATTGAAGCTGCTCTGAACCGACAGACTGTGTCCGATAACTTCTCGGTTCGACAGCTGACGATAACGATAAGAACTATCGTGAATGGAATATGCTACCTCGCGACATTTGTTTTCGGAATCAATGCTGTTGGTTTATTCCTTTACTCTGGTCAGTTGGCATTAAACTCTGTCATGGAAGAAGGTTCTGAAGATAAAGAACCTGCAACTAAAGGTGATAAGCAAGTTAGCTCGCCGAACTCAACCGTTGAAACGACCCTCGATGGCACCGAATCAAGCAGCAGCAAAGATGATCAAAGTTGAAGTAACTTGCAGTGATGGAAGAGAATCCGCATGGGTAAGATTTTGGCTGTTTTGGTTGCCATTTGTGAATGCTATCTGCTTTGATTGATAGTGCATTTTTAGTATCATCTTCTTCATTTTGAGTAGCTCTCTGTCATCTGTGATTATTATTATATGGGTATATACACAGAGAAAATATAGTCTATGATTAGGCAGCAATCTGCACAATATATTAATGCTCTGCTGACACTAAACTATGGATGAACAATGTATTTTAGCAACTGACGACCTCCCGACTTTCCTTTGCATCCCCCT

Coding sequence (CDS)

ATGTTGCACACCATCAACCTTCTCTCCTCCTCCAATTTCCCTCTCTCTCTCTCTCTAACCCACAGTCTCCTTCTCTCTCCTCCGCCCTTCTCCACTCTCCACCGACCCATTACCTCCCCCTCTGTTCTCCCCCTCCGAACTCAGCAATGCTTCTGCTTCCCCCAATTCTCTGAACTCTCCGCCGCCGCCGCCGCCGACGATGGCCCAATTGAACTCCCATCCACCATTTTTGCTACCACTGATGACCCTTCTTCTATCCAAGTCGCTACCAGTGTTCTCCTTACTGGGGCTATCTCCGTCTTCCTCTTTCGCTCCCTTCGCCGCCGTGCCAAGCGGGTTAAAGAGCTGAAATTCAGGTCTGCTGGAGTAAAGAAATCTCTAAAGGAGGAAGCAATGGAGAGCTTGAAAGCAATTAGTACAGGTCCAATTGAATCAAAGTCTAAACCTTCACCCATACAAACATTCTTGGGAGCTATAGCAGCCGGTGTTATTGCATTGATCTTATATAAGTTCACCACTACCATTGAAGCTGCTCTGAACCGACAGACTGTGTCCGATAACTTCTCGGTTCGACAGCTGACGATAACGATAAGAACTATCGTGAATGGAATATGCTACCTCGCGACATTTGTTTTCGGAATCAATGCTGTTGGTTTATTCCTTTACTCTGGTCAGTTGGCATTAAACTCTGTCATGGAAGAAGGTTCTGAAGATAAAGAACCTGCAACTAAAGGTGATAAGCAAGTTAGCTCGCCGAACTCAACCGTTGAAACGACCCTCGATGGCACCGAATCAAGCAGCAGCAAAGATGATCAAAGTTGA

Protein sequence

MLHTINLLSSSNFPLSLSLTHSLLLSPPPFSTLHRPITSPSVLPLRTQQCFCFPQFSELSAAAAADDGPIELPSTIFATTDDPSSIQVATSVLLTGAISVFLFRSLRRRAKRVKELKFRSAGVKKSLKEEAMESLKAISTGPIESKSKPSPIQTFLGAIAAGVIALILYKFTTTIEAALNRQTVSDNFSVRQLTITIRTIVNGICYLATFVFGINAVGLFLYSGQLALNSVMEEGSEDKEPATKGDKQVSSPNSTVETTLDGTESSSSKDDQS
Homology
BLAST of Cp4.1LG01g01740 vs. NCBI nr
Match: XP_023535820.1 (uncharacterized protein LOC111797135 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 499 bits (1285), Expect = 2.32e-177
Identity = 273/273 (100.00%), Postives = 273/273 (100.00%), Query Frame = 0

Query: 1   MLHTINLLSSSNFPLSLSLTHSLLLSPPPFSTLHRPITSPSVLPLRTQQCFCFPQFSELS 60
           MLHTINLLSSSNFPLSLSLTHSLLLSPPPFSTLHRPITSPSVLPLRTQQCFCFPQFSELS
Sbjct: 1   MLHTINLLSSSNFPLSLSLTHSLLLSPPPFSTLHRPITSPSVLPLRTQQCFCFPQFSELS 60

Query: 61  AAAAADDGPIELPSTIFATTDDPSSIQVATSVLLTGAISVFLFRSLRRRAKRVKELKFRS 120
           AAAAADDGPIELPSTIFATTDDPSSIQVATSVLLTGAISVFLFRSLRRRAKRVKELKFRS
Sbjct: 61  AAAAADDGPIELPSTIFATTDDPSSIQVATSVLLTGAISVFLFRSLRRRAKRVKELKFRS 120

Query: 121 AGVKKSLKEEAMESLKAISTGPIESKSKPSPIQTFLGAIAAGVIALILYKFTTTIEAALN 180
           AGVKKSLKEEAMESLKAISTGPIESKSKPSPIQTFLGAIAAGVIALILYKFTTTIEAALN
Sbjct: 121 AGVKKSLKEEAMESLKAISTGPIESKSKPSPIQTFLGAIAAGVIALILYKFTTTIEAALN 180

Query: 181 RQTVSDNFSVRQLTITIRTIVNGICYLATFVFGINAVGLFLYSGQLALNSVMEEGSEDKE 240
           RQTVSDNFSVRQLTITIRTIVNGICYLATFVFGINAVGLFLYSGQLALNSVMEEGSEDKE
Sbjct: 181 RQTVSDNFSVRQLTITIRTIVNGICYLATFVFGINAVGLFLYSGQLALNSVMEEGSEDKE 240

Query: 241 PATKGDKQVSSPNSTVETTLDGTESSSSKDDQS 273
           PATKGDKQVSSPNSTVETTLDGTESSSSKDDQS
Sbjct: 241 PATKGDKQVSSPNSTVETTLDGTESSSSKDDQS 273

BLAST of Cp4.1LG01g01740 vs. NCBI nr
Match: KAG6600385.1 (hypothetical protein SDJN03_05618, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 469 bits (1208), Expect = 1.45e-165
Identity = 261/277 (94.22%), Postives = 267/277 (96.39%), Query Frame = 0

Query: 1   MLHTINLLSSSNFPLSLSLTHSLLLSPPPFSTLHRPITSP-SVLPLRTQQCFCFPQFSEL 60
           MLHTINLLSSSNFPLSLSLTH+LLLSPPPFS+LHRPITSP SV PLRT QCFCFPQFSEL
Sbjct: 1   MLHTINLLSSSNFPLSLSLTHNLLLSPPPFSSLHRPITSPPSVPPLRTHQCFCFPQFSEL 60

Query: 61  SAAAAA---DDGPIELPSTIFATTDDPSSIQVATSVLLTGAISVFLFRSLRRRAKRVKEL 120
           S AAA+   DDGPIELPSTIFATTDDPSSIQVATSVLLTGAISVFLFRSLRRRAKRVKEL
Sbjct: 61  SDAAASFPDDDGPIELPSTIFATTDDPSSIQVATSVLLTGAISVFLFRSLRRRAKRVKEL 120

Query: 121 KFRSAGVKKSLKEEAMESLKAISTGPIESKSKPSPIQTFLGAIAAGVIALILYKFTTTIE 180
           KFRSAGVKKSLKEEAMESLKAISTGPI+SKSKPSP+Q FLGAIAAGVIALILYKFTTTIE
Sbjct: 121 KFRSAGVKKSLKEEAMESLKAISTGPIQSKSKPSPVQAFLGAIAAGVIALILYKFTTTIE 180

Query: 181 AALNRQTVSDNFSVRQLTITIRTIVNGICYLATFVFGINAVGLFLYSGQLALNSVMEEGS 240
           AALNRQTVSDNFSVRQLTITIRTIVNGICYLATFVFGINAVGLFLYSGQLALNS+MEEGS
Sbjct: 181 AALNRQTVSDNFSVRQLTITIRTIVNGICYLATFVFGINAVGLFLYSGQLALNSIMEEGS 240

Query: 241 EDKEPATKGDKQVSSPNSTVETTLDGTESSSSKDDQS 273
           E KEPATKGDKQVSSPNSTVE TLDGTESSSSKDDQS
Sbjct: 241 EGKEPATKGDKQVSSPNSTVEMTLDGTESSSSKDDQS 277

BLAST of Cp4.1LG01g01740 vs. NCBI nr
Match: KAG7031048.1 (hypothetical protein SDJN02_05087, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 458 bits (1178), Expect = 1.33e-160
Identity = 262/302 (86.75%), Postives = 268/302 (88.74%), Query Frame = 0

Query: 1   MLHTINLLSSSNFPLSLSLTHSLLLSPPPFSTLHRPITSP-SVLPLRTQQCFCFPQFSEL 60
           MLHTINLLSSSNFPLSLSLTH+LLLSPPPFS+LHRPITSP SV PLRT QCFCFPQFSEL
Sbjct: 1   MLHTINLLSSSNFPLSLSLTHNLLLSPPPFSSLHRPITSPPSVPPLRTHQCFCFPQFSEL 60

Query: 61  SAAAAA---DDGPIELPSTIFATTDDPSSIQVATSVLLTGAISVFLFRSLRRRAKRVKEL 120
           S AAA+   DDGPIELPSTIFATTDDPSSIQVATSVLLTGAISVFLFRSLRRRAKRVKEL
Sbjct: 61  SDAAASFPDDDGPIELPSTIFATTDDPSSIQVATSVLLTGAISVFLFRSLRRRAKRVKEL 120

Query: 121 KFRSAGVKKSLKEEAMESLKAISTGPIESKSKPSPIQTFLGAIAAGVIALILYKFTTTIE 180
           KFRSAGVKKSLKEEAMESLKAISTGPI+SKSKPSP+Q FLGAIAAGVIALILYKFTTTIE
Sbjct: 121 KFRSAGVKKSLKEEAMESLKAISTGPIQSKSKPSPVQAFLGAIAAGVIALILYKFTTTIE 180

Query: 181 AALNRQTVSDNFSV-------------------------RQLTITIRTIVNGICYLATFV 240
           AALNRQTVSDNFSV                         RQLTITIRTIVNGICYLATFV
Sbjct: 181 AALNRQTVSDNFSVHSRGYFILIFVLIISLSFSSGQLMVRQLTITIRTIVNGICYLATFV 240

Query: 241 FGINAVGLFLYSGQLALNSVMEEGSEDKEPATKGDKQVSSPNSTVETTLDGTESSSSKDD 273
           FGINAVGLFLYSGQLALNS+MEEGSE KEPATKGDKQVSSPNSTVETTLDGTESSSSKDD
Sbjct: 241 FGINAVGLFLYSGQLALNSIMEEGSEGKEPATKGDKQVSSPNSTVETTLDGTESSSSKDD 300

BLAST of Cp4.1LG01g01740 vs. NCBI nr
Match: XP_038905614.1 (uncharacterized protein LOC120091579 [Benincasa hispida])

HSP 1 Score: 397 bits (1020), Expect = 8.49e-137
Identity = 230/282 (81.56%), Postives = 244/282 (86.52%), Query Frame = 0

Query: 1   MLHTINLLSSSNFP---LSLSLTHSLLLSPPPFST-----LHRPITSPSVLPLRTQQCFC 60
           ML T NLLSS NFP   LSL+  H L LSPP  S+     LHRPI   SV PL T   FC
Sbjct: 1   MLQTQNLLSS-NFPFFTLSLTHNHKLFLSPPTHSSSSSSSLHRPIAFHSVSPLTTHHSFC 60

Query: 61  FPQFSELSAAAAADD-GPIELPSTIFATTDDPSSIQVATSVLLTGAISVFLFRSLRRRAK 120
            PQFSEL+ A   DD GP+ELPSTIFATTDDPSS+QVATSVLLTGAISVFLFRSLRRRAK
Sbjct: 61  LPQFSELADATFLDDNGPVELPSTIFATTDDPSSLQVATSVLLTGAISVFLFRSLRRRAK 120

Query: 121 RVKELKFRSAGVKKSLKEEAMESLKAISTGPIESKSKPSPIQTFLGAIAAGVIALILYKF 180
           RVKELKFRSAGVKKSLKEEAM+SLKAISTGPIESKS PSPIQ FLGAIAAGVIA+ILYKF
Sbjct: 121 RVKELKFRSAGVKKSLKEEAMDSLKAISTGPIESKSTPSPIQAFLGAIAAGVIAVILYKF 180

Query: 181 TTTIEAALNRQTVSDNFSVRQLTITIRTIVNGICYLATFVFGINAVGLFLYSGQLALNSV 240
           TTTIEAALNRQTVSDNFSVRQLTITIRTIVNG+CYLATFVFGINA+GLFLYSGQLA+NSV
Sbjct: 181 TTTIEAALNRQTVSDNFSVRQLTITIRTIVNGLCYLATFVFGINAIGLFLYSGQLAMNSV 240

Query: 241 MEEGSEDKEPATKGDKQVSSPNSTVETTLDGTESSSSKDDQS 273
           MEEGS+DKEP  KGDKQVS PNST ETTL+ TESS+S+DDQS
Sbjct: 241 MEEGSKDKEPKGKGDKQVSPPNSTAETTLNSTESSNSEDDQS 281

BLAST of Cp4.1LG01g01740 vs. NCBI nr
Match: TYK11253.1 (DUF3082 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 392 bits (1006), Expect = 9.96e-135
Identity = 226/279 (81.00%), Postives = 243/279 (87.10%), Query Frame = 0

Query: 1   MLHTINLLSSSNFPL-SLS---LTHSLLLSPPP-FSTLHRPITSPSVLPLRTQQCFCFPQ 60
           M HT NLLSS NFPL +LS     H L LSPP   S+LHRPIT  S+ PL T +CFC PQ
Sbjct: 1   MWHTQNLLSS-NFPLFTLSPPTYNHKLFLSPPTTLSSLHRPITFHSISPLTTHRCFCLPQ 60

Query: 61  FSELSAAAAADD-GPIELPSTIFATTDDPSSIQVATSVLLTGAISVFLFRSLRRRAKRVK 120
           F++L+ A   DD GP+ELP TIFATTD+PSS+QVATSVLLTGAISVFLFRSLRRRAKRVK
Sbjct: 61  FTDLADATFLDDNGPVELPPTIFATTDNPSSLQVATSVLLTGAISVFLFRSLRRRAKRVK 120

Query: 121 ELKFRSAGVKKSLKEEAMESLKAISTGPIESKSKPSPIQTFLGAIAAGVIALILYKFTTT 180
           ELKFRSAGVKKSLKEEAM+SLKAISTGPI SKS PSPIQ FLGAIAAGVIALILYKFTTT
Sbjct: 121 ELKFRSAGVKKSLKEEAMDSLKAISTGPIASKSTPSPIQAFLGAIAAGVIALILYKFTTT 180

Query: 181 IEAALNRQTVSDNFSVRQLTITIRTIVNGICYLATFVFGINAVGLFLYSGQLALNSVMEE 240
           IEAALNRQTVSDNFSVRQLTITIRTIVNG+CYLATFVFGINA+GLFLYSGQLA+NSVMEE
Sbjct: 181 IEAALNRQTVSDNFSVRQLTITIRTIVNGLCYLATFVFGINAIGLFLYSGQLAMNSVMEE 240

Query: 241 GSEDKEPATKGDKQVSSPNSTVETTLDGTESSSSKDDQS 273
           GS+DKEP  K D+QVS P ST ETTLD TESS+SKDDQS
Sbjct: 241 GSKDKEPKAKRDEQVSPPTSTAETTLDSTESSNSKDDQS 278

BLAST of Cp4.1LG01g01740 vs. ExPASy TrEMBL
Match: A0A5D3CH90 (DUF3082 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold227G001090 PE=4 SV=1)

HSP 1 Score: 392 bits (1006), Expect = 4.82e-135
Identity = 226/279 (81.00%), Postives = 243/279 (87.10%), Query Frame = 0

Query: 1   MLHTINLLSSSNFPL-SLS---LTHSLLLSPPP-FSTLHRPITSPSVLPLRTQQCFCFPQ 60
           M HT NLLSS NFPL +LS     H L LSPP   S+LHRPIT  S+ PL T +CFC PQ
Sbjct: 1   MWHTQNLLSS-NFPLFTLSPPTYNHKLFLSPPTTLSSLHRPITFHSISPLTTHRCFCLPQ 60

Query: 61  FSELSAAAAADD-GPIELPSTIFATTDDPSSIQVATSVLLTGAISVFLFRSLRRRAKRVK 120
           F++L+ A   DD GP+ELP TIFATTD+PSS+QVATSVLLTGAISVFLFRSLRRRAKRVK
Sbjct: 61  FTDLADATFLDDNGPVELPPTIFATTDNPSSLQVATSVLLTGAISVFLFRSLRRRAKRVK 120

Query: 121 ELKFRSAGVKKSLKEEAMESLKAISTGPIESKSKPSPIQTFLGAIAAGVIALILYKFTTT 180
           ELKFRSAGVKKSLKEEAM+SLKAISTGPI SKS PSPIQ FLGAIAAGVIALILYKFTTT
Sbjct: 121 ELKFRSAGVKKSLKEEAMDSLKAISTGPIASKSTPSPIQAFLGAIAAGVIALILYKFTTT 180

Query: 181 IEAALNRQTVSDNFSVRQLTITIRTIVNGICYLATFVFGINAVGLFLYSGQLALNSVMEE 240
           IEAALNRQTVSDNFSVRQLTITIRTIVNG+CYLATFVFGINA+GLFLYSGQLA+NSVMEE
Sbjct: 181 IEAALNRQTVSDNFSVRQLTITIRTIVNGLCYLATFVFGINAIGLFLYSGQLAMNSVMEE 240

Query: 241 GSEDKEPATKGDKQVSSPNSTVETTLDGTESSSSKDDQS 273
           GS+DKEP  K D+QVS P ST ETTLD TESS+SKDDQS
Sbjct: 241 GSKDKEPKAKRDEQVSPPTSTAETTLDSTESSNSKDDQS 278

BLAST of Cp4.1LG01g01740 vs. ExPASy TrEMBL
Match: A0A6J1CM21 (uncharacterized protein LOC111012858 OS=Momordica charantia OX=3673 GN=LOC111012858 PE=4 SV=1)

HSP 1 Score: 383 bits (983), Expect = 1.47e-131
Identity = 223/279 (79.93%), Postives = 238/279 (85.30%), Query Frame = 0

Query: 1   MLHTINLLSSSNFPLSLSLTHSLLLSPPPFSTLHRPITSPSVLP---LRTQQCFCFPQFS 60
           ML T N LSS  FP +LSLTH   LSPP  S+LHRPIT P +     LR QQC   PQ S
Sbjct: 1   MLQTHNFLSSI-FPSTLSLTHKSCLSPPSLSSLHRPITFPFLSTHRRLRIQQCS--PQIS 60

Query: 61  ELSAAAAA---DDGPIELPSTIFATTDDPSSIQVATSVLLTGAISVFLFRSLRRRAKRVK 120
           ELS A A    DDGP+ELP TIFATTDDPSS+QVATSVLLTGAIS+FLFRSLRRRA+R K
Sbjct: 61  ELSEATATFDEDDGPVELPPTIFATTDDPSSLQVATSVLLTGAISIFLFRSLRRRARRAK 120

Query: 121 ELKFRSAGVKKSLKEEAMESLKAISTGPIESKSKPSPIQTFLGAIAAGVIALILYKFTTT 180
           ELKFRS GVKKSLKEEA++SLKAISTGPIESKS PSPIQ FLGAIAAGVIALILYKFTTT
Sbjct: 121 ELKFRSVGVKKSLKEEALDSLKAISTGPIESKSTPSPIQAFLGAIAAGVIALILYKFTTT 180

Query: 181 IEAALNRQTVSDNFSVRQLTITIRTIVNGICYLATFVFGINAVGLFLYSGQLALNSVMEE 240
           IEAALNRQT+SDNFSVRQ+TITIRTIVNGICYLATFVFGINAVGLFLYSGQLA+NS+ME+
Sbjct: 181 IEAALNRQTMSDNFSVRQMTITIRTIVNGICYLATFVFGINAVGLFLYSGQLAVNSIMED 240

Query: 241 GSEDKEPATKGDKQVSSPNSTVETTLDGTESSSSKDDQS 273
           GS DKE AT  DKQVS PNSTVET LD TESSS+KDDQS
Sbjct: 241 GSTDKETATIVDKQVSPPNSTVETALDSTESSSNKDDQS 276

BLAST of Cp4.1LG01g01740 vs. ExPASy TrEMBL
Match: A0A1S4E0Y7 (LOW QUALITY PROTEIN: uncharacterized protein LOC103496210 OS=Cucumis melo OX=3656 GN=LOC103496210 PE=4 SV=1)

HSP 1 Score: 387 bits (995), Expect = 3.51e-127
Identity = 224/279 (80.29%), Postives = 242/279 (86.74%), Query Frame = 0

Query: 1   MLHTINLLSSSNFPL-SLS---LTHSLLLSPPP-FSTLHRPITSPSVLPLRTQQCFCFPQ 60
           M HT NLLSS N PL +LS     H L LSPP   S+LHRPIT  S+ PL T +CFC PQ
Sbjct: 457 MWHTQNLLSS-NLPLFTLSPPTYNHKLFLSPPTTLSSLHRPITFHSISPLTTHRCFCLPQ 516

Query: 61  FSELSAAAAADD-GPIELPSTIFATTDDPSSIQVATSVLLTGAISVFLFRSLRRRAKRVK 120
           F++L+ A   DD GP+ELP TIFATTD+PSS+QVATSVLLTGAISVFLFRSLRRRAKRVK
Sbjct: 517 FTDLADATFLDDNGPVELPPTIFATTDNPSSLQVATSVLLTGAISVFLFRSLRRRAKRVK 576

Query: 121 ELKFRSAGVKKSLKEEAMESLKAISTGPIESKSKPSPIQTFLGAIAAGVIALILYKFTTT 180
           ELKFRSAGVKKSLKEEAM+SLKAISTGPI SKS PSPIQ FLGAIAAGVIALILYKFTTT
Sbjct: 577 ELKFRSAGVKKSLKEEAMDSLKAISTGPIASKSTPSPIQAFLGAIAAGVIALILYKFTTT 636

Query: 181 IEAALNRQTVSDNFSVRQLTITIRTIVNGICYLATFVFGINAVGLFLYSGQLALNSVMEE 240
           IEAALNRQTVSDNFSVRQLTITIRTIVNG+CYLATFVFGINA+GLFLYSGQLA+NSVMEE
Sbjct: 637 IEAALNRQTVSDNFSVRQLTITIRTIVNGLCYLATFVFGINAIGLFLYSGQLAMNSVMEE 696

Query: 241 GSEDKEPATKGDKQVSSPNSTVETTLDGTESSSSKDDQS 273
           GS+DKEP  K D+QVS P ST ETTL+ TESS+SKDDQS
Sbjct: 697 GSKDKEPKAKRDEQVSPPTSTAETTLNSTESSNSKDDQS 734

BLAST of Cp4.1LG01g01740 vs. ExPASy TrEMBL
Match: A0A5A7UXD2 (DUF3082 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold803G00340 PE=4 SV=1)

HSP 1 Score: 387 bits (995), Expect = 2.63e-126
Identity = 224/279 (80.29%), Postives = 242/279 (86.74%), Query Frame = 0

Query: 1   MLHTINLLSSSNFPL-SLS---LTHSLLLSPPP-FSTLHRPITSPSVLPLRTQQCFCFPQ 60
           M HT NLLSS N PL +LS     H L LSPP   S+LHRPIT  S+ PL T +CFC PQ
Sbjct: 535 MWHTQNLLSS-NLPLFTLSPPTYNHKLFLSPPTTLSSLHRPITFHSISPLTTHRCFCLPQ 594

Query: 61  FSELSAAAAADD-GPIELPSTIFATTDDPSSIQVATSVLLTGAISVFLFRSLRRRAKRVK 120
           F++L+ A   DD GP+ELP TIFATTD+PSS+QVATSVLLTGAISVFLFRSLRRRAKRVK
Sbjct: 595 FTDLADATFLDDNGPVELPPTIFATTDNPSSLQVATSVLLTGAISVFLFRSLRRRAKRVK 654

Query: 121 ELKFRSAGVKKSLKEEAMESLKAISTGPIESKSKPSPIQTFLGAIAAGVIALILYKFTTT 180
           ELKFRSAGVKKSLKEEAM+SLKAISTGPI SKS PSPIQ FLGAIAAGVIALILYKFTTT
Sbjct: 655 ELKFRSAGVKKSLKEEAMDSLKAISTGPIASKSTPSPIQAFLGAIAAGVIALILYKFTTT 714

Query: 181 IEAALNRQTVSDNFSVRQLTITIRTIVNGICYLATFVFGINAVGLFLYSGQLALNSVMEE 240
           IEAALNRQTVSDNFSVRQLTITIRTIVNG+CYLATFVFGINA+GLFLYSGQLA+NSVMEE
Sbjct: 715 IEAALNRQTVSDNFSVRQLTITIRTIVNGLCYLATFVFGINAIGLFLYSGQLAMNSVMEE 774

Query: 241 GSEDKEPATKGDKQVSSPNSTVETTLDGTESSSSKDDQS 273
           GS+DKEP  K D+QVS P ST ETTL+ TESS+SKDDQS
Sbjct: 775 GSKDKEPKAKRDEQVSPPTSTAETTLNSTESSNSKDDQS 812

BLAST of Cp4.1LG01g01740 vs. ExPASy TrEMBL
Match: A0A5N6RX82 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_020622 PE=4 SV=1)

HSP 1 Score: 293 bits (749), Expect = 5.81e-96
Identity = 173/270 (64.07%), Postives = 213/270 (78.89%), Query Frame = 0

Query: 10  SSNFPLSLSLTH-SLLLSPPPFSTLHRPITSPSVLPL-RTQQCFCFPQFSELSAAAAADD 69
           S+N P++LS  H S + S P     +RP T   VL L R +      +  E ++A A ++
Sbjct: 11  STNIPVALSHLHNSSVFSSPVIYFPYRPTTLRHVLALPRARPETWLAEVPEPTSAPALEE 70

Query: 70  GPIELPST---IFATTDDPSSIQVATSVLLTGAISVFLFRSLRRRAKRVKELKFRSAGVK 129
           GPIELP +   IFATTDDP+ IQVATSVLLTGAISVFLFR++RRRA+R KELKFRS GVK
Sbjct: 71  GPIELPPSTPSIFATTDDPAPIQVATSVLLTGAISVFLFRAVRRRARRAKELKFRSDGVK 130

Query: 130 KSLKEEAMESLKAISTGPIESKSKPSPIQTFLGAIAAGVIALILYKFTTTIEAALNRQTV 189
           KSLKE+AM+SL+A+++ P+E+ S PSP+Q FLG +AAGVIALILYKFTTTIEAALNRQT+
Sbjct: 131 KSLKEDAMDSLRAMASAPVEANSPPSPVQAFLGGVAAGVIALILYKFTTTIEAALNRQTI 190

Query: 190 SDNFSVRQLTITIRTIVNGICYLATFVFGINAVGLFLYSGQLALNSVMEEGSEDKEPATK 249
           SDN SVRQ+T+TIRTIVNG+CYLATF+FGIN+ GLFLYSGQL +NS+ME GS ++E  +K
Sbjct: 191 SDNLSVRQITVTIRTIVNGLCYLATFIFGINSFGLFLYSGQLGINSLME-GSTNEENKSK 250

Query: 250 GD-KQVSSPNSTVETTLDGTESSSSKDDQS 273
           GD +Q+ SPNST E+  D TE SSSK DQS
Sbjct: 251 GDDQQLGSPNSTAESATDSTEVSSSKADQS 279

BLAST of Cp4.1LG01g01740 vs. TAIR 10
Match: AT3G15110.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3082 (InterPro:IPR021434); Has 77 Blast hits to 77 proteins in 38 species: Archae - 0; Bacteria - 37; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). )

HSP 1 Score: 229.6 bits (584), Expect = 3.1e-60
Identity = 138/223 (61.88%), Postives = 165/223 (73.99%), Query Frame = 0

Query: 62  AAAADDGPIELP----------STIFATTDDPSSIQVATSVLLTGAISVFLFRSLRRRAK 121
           A   +DGPIELP          ++IFAT+DDP+ +Q+ATSVLLTGAI+VFL RS+RRRAK
Sbjct: 52  AEVEEDGPIELPTSSTSPFSSTNSIFATSDDPTPLQLATSVLLTGAITVFLIRSVRRRAK 111

Query: 122 RVKELKFRSAGVKKSLKEEAMESLKAISTGPIE-SKSKPSPIQTFLGAIAAGVIALILYK 181
           R KEL FRS G KKSLKEEAM++LKA+S+ PIE   S PS  Q FLGAIAAGVIALILYK
Sbjct: 112 RAKELTFRSTGAKKSLKEEAMDNLKALSSTPIEGGNSTPSAAQAFLGAIAAGVIALILYK 171

Query: 182 FTTTIEAALNRQTVSDNFSVRQLTITIRTIVNGICYLATFVFGINAVGLFLYSGQLALNS 241
           FT T+E+ LNRQT+SDNFSVRQ+T+T+RTI+NGICYLATFVFG+NA GL LYSGQLA N 
Sbjct: 172 FTVTVESGLNRQTISDNFSVRQITVTVRTIINGICYLATFVFGLNAFGLLLYSGQLAFN- 231

Query: 242 VMEEGSEDKEPATKGDKQVSSPNSTVETTLDGTESSSSKDDQS 274
             E+ +E+   AT      SS         D +E + S +DQS
Sbjct: 232 --EDSAEENMKATTQPGDSSSG--------DNSEVNKSNEDQS 263

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_023535820.12.32e-177100.00uncharacterized protein LOC111797135 [Cucurbita pepo subsp. pepo][more]
KAG6600385.11.45e-16594.22hypothetical protein SDJN03_05618, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7031048.11.33e-16086.75hypothetical protein SDJN02_05087, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_038905614.18.49e-13781.56uncharacterized protein LOC120091579 [Benincasa hispida][more]
TYK11253.19.96e-13581.00DUF3082 domain-containing protein [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
A0A5D3CH904.82e-13581.00DUF3082 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A6J1CM211.47e-13179.93uncharacterized protein LOC111012858 OS=Momordica charantia OX=3673 GN=LOC111012... [more]
A0A1S4E0Y73.51e-12780.29LOW QUALITY PROTEIN: uncharacterized protein LOC103496210 OS=Cucumis melo OX=365... [more]
A0A5A7UXD22.63e-12680.29DUF3082 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
A0A5N6RX825.81e-9664.07Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_020622 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT3G15110.13.1e-6061.88unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021434Protein of unknown function DUF3082PFAMPF11282DUF3082coord: 149..226
e-value: 5.7E-31
score: 106.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 246..267
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 233..273
NoneNo IPR availablePANTHERPTHR35733OS02G0307800 PROTEINcoord: 47..273

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g01740.1Cp4.1LG01g01740.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane