Cp4.1LG01g01620 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG01g01620
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Subtilisin-like protease
Location	Cp4.1LG01: 2900952 .. 2901242 (+)
RNA-Seq Expression	Cp4.1LG01g01620
Synteny	Cp4.1LG01g01620

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTAGCAGTTGGAGAAGAACGGTTGGGAATGTCAGGTCCTTCATCGGCAACTCCATGGGCGGTCTCAGAGGCGGTACCAATCTTGCTTCCTGGGTAGTCGCTGGAACACTTGCCTACTTCCTCTGGGTCAAGCCCTCCCAGGACCTCAAACGCGAACAGCAAGAAAGAGCTGCTCTTGCAGCCACGGATCCTTATCGATACATCGAGAAGAGGAAACCTATTCCTGATCCCCAGGAGACTGGTTTGATATATGGCAACAAGAATAAACCTAAAATATCAGAGGAGTAA

mRNA sequence

ATGGCTAGCAGTTGGAGAAGAACGGTTGGGAATGTCAGGTCCTTCATCGGCAACTCCATGGGCGGTCTCAGAGGCGGTACCAATCTTGCTTCCTGGGTAGTCGCTGGAACACTTGCCTACTTCCTCTGGGTCAAGCCCTCCCAGGACCTCAAACGCGAACAGCAAGAAAGAGCTGCTCTTGCAGCCACGGATCCTTATCGATACATCGAGAAGAGGAAACCTATTCCTGATCCCCAGGAGACTGGTTTGATATATGGCAACAAGAATAAACCTAAAATATCAGAGGAGTAA

Coding sequence (CDS)

ATGGCTAGCAGTTGGAGAAGAACGGTTGGGAATGTCAGGTCCTTCATCGGCAACTCCATGGGCGGTCTCAGAGGCGGTACCAATCTTGCTTCCTGGGTAGTCGCTGGAACACTTGCCTACTTCCTCTGGGTCAAGCCCTCCCAGGACCTCAAACGCGAACAGCAAGAAAGAGCTGCTCTTGCAGCCACGGATCCTTATCGATACATCGAGAAGAGGAAACCTATTCCTGATCCCCAGGAGACTGGTTTGATATATGGCAACAAGAATAAACCTAAAATATCAGAGGAGTAA

Protein sequence

MASSWRRTVGNVRSFIGNSMGGLRGGTNLASWVVAGTLAYFLWVKPSQDLKREQQERAALAATDPYRYIEKRKPIPDPQETGLIYGNKNKPKISEE

Homology

[Close]

BLAST of Cp4.1LG01g01620 vs. NCBI nr
Match: KAG6600390.1 (hypothetical protein SDJN03_05623, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 189 bits (480), Expect = 2.01e-60
Identity = 93/96 (96.88%), Postives = 94/96 (97.92%), Query Frame = 0


Query: 1  MASSWRRTVGNVRSFIGNSMGGLRGGTNLASWVVAGTLAYFLWVKPSQDLKREQQERAAL 60
          M SSWRRTVGNVRSFIGNSMGGLRGGTNLASWVVAGTLAYFLWVKPSQDLKREQQERAAL
Sbjct: 1  MTSSWRRTVGNVRSFIGNSMGGLRGGTNLASWVVAGTLAYFLWVKPSQDLKREQQERAAL 60

Query: 61 AATDPYRYIEKRKPIPDPQETGLIYGNKNKPKISEE 96
          AA+DPYRYIEKRKPIPDPQETGLIYGNKNKPK SEE
Sbjct: 61 AASDPYRYIEKRKPIPDPQETGLIYGNKNKPKKSEE 96

[Close]

BLAST of Cp4.1LG01g01620 vs. NCBI nr
Match: KAG7031052.1 (hypothetical protein SDJN02_05091, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 186 bits (472), Expect = 8.12e-58
Identity = 91/95 (95.79%), Postives = 92/95 (96.84%), Query Frame = 0


Query: 2   ASSWRRTVGNVRSFIGNSMGGLRGGTNLASWVVAGTLAYFLWVKPSQDLKREQQERAALA 61
           +  WRRTVGNVRSFIGNSMGGLRGGTNLASWVVAGTLAYFLWVKPSQDLKREQQERAALA
Sbjct: 102 SEGWRRTVGNVRSFIGNSMGGLRGGTNLASWVVAGTLAYFLWVKPSQDLKREQQERAALA 161

Query: 62  ATDPYRYIEKRKPIPDPQETGLIYGNKNKPKISEE 96
           ATDPYRYIEKRKPIPDPQETGLIYGNKNKPK SEE
Sbjct: 162 ATDPYRYIEKRKPIPDPQETGLIYGNKNKPKKSEE 196

[Close]

BLAST of Cp4.1LG01g01620 vs. NCBI nr
Match: XP_012073563.1 (uncharacterized protein LOC105635169 [Jatropha curcas] >KDP36738.1 hypothetical protein JCGZ_08029 [Jatropha curcas])

HSP 1 Score: 177 bits (450), Expect = 7.60e-56
Identity = 85/92 (92.39%), Postives = 90/92 (97.83%), Query Frame = 0


Query: 1  MASSWRRTVGNVRSFIGNSMGGLRGGTNLASWVVAGTLAYFLWVKPSQDLKREQQERAAL 60
          M+S+WRRT+GNVRSFIGNSMGGLRGG+NLASWVVAGTLAYFLWVKPSQDLKREQQERAAL
Sbjct: 1  MSSNWRRTLGNVRSFIGNSMGGLRGGSNLASWVVAGTLAYFLWVKPSQDLKREQQERAAL 60

Query: 61 AATDPYRYIEKRKPIPDPQETGLIYGNKNKPK 92
          AA DPYRY+EKRKPIPDPQETGLIYGNKNK K
Sbjct: 61 AAADPYRYVEKRKPIPDPQETGLIYGNKNKTK 92

[Close]

BLAST of Cp4.1LG01g01620 vs. NCBI nr
Match: XP_022155897.1 (uncharacterized protein LOC111022900 [Momordica charantia] >XP_022155898.1 uncharacterized protein LOC111022900 [Momordica charantia])

HSP 1 Score: 177 bits (449), Expect = 1.08e-55
Identity = 86/96 (89.58%), Postives = 91/96 (94.79%), Query Frame = 0


Query: 1  MASSWRRTVGNVRSFIGNSMGGLRGGTNLASWVVAGTLAYFLWVKPSQDLKREQQERAAL 60
          MASSWRR+ GNVRSFIGNSMGGLRGG+NLASW+VAGTLAYFLWVKPSQDLKREQQERAAL
Sbjct: 1  MASSWRRSFGNVRSFIGNSMGGLRGGSNLASWIVAGTLAYFLWVKPSQDLKREQQERAAL 60

Query: 61 AATDPYRYIEKRKPIPDPQETGLIYGNKNKPKISEE 96
          A TDP+RYIEKRKPIPDPQETGLIYGNKN P+  EE
Sbjct: 61 ADTDPHRYIEKRKPIPDPQETGLIYGNKNTPRKPEE 96

[Close]

BLAST of Cp4.1LG01g01620 vs. NCBI nr
Match: XP_011653322.1 (uncharacterized protein LOC101205325 isoform X2 [Cucumis sativus])

HSP 1 Score: 176 bits (445), Expect = 4.40e-55
Identity = 85/96 (88.54%), Postives = 90/96 (93.75%), Query Frame = 0


Query: 1  MASSWRRTVGNVRSFIGNSMGGLRGGTNLASWVVAGTLAYFLWVKPSQDLKREQQERAAL 60
          M SSWRR++GNVRSFIGNSMGGLRGG NLASWVVAGTLAY+LWVKPSQDLKREQQERAAL
Sbjct: 1  MTSSWRRSLGNVRSFIGNSMGGLRGGANLASWVVAGTLAYYLWVKPSQDLKREQQERAAL 60

Query: 61 AATDPYRYIEKRKPIPDPQETGLIYGNKNKPKISEE 96
          AA DP+RYIEKRKPIPDPQETGLIYGNKN P+  EE
Sbjct: 61 AAVDPHRYIEKRKPIPDPQETGLIYGNKNTPRKPEE 96

[Close]

BLAST of Cp4.1LG01g01620 vs. ExPASy TrEMBL
Match: A0A067KP46 (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_08029 PE=4 SV=1)

HSP 1 Score: 177 bits (450), Expect = 3.68e-56
Identity = 85/92 (92.39%), Postives = 90/92 (97.83%), Query Frame = 0


Query: 1  MASSWRRTVGNVRSFIGNSMGGLRGGTNLASWVVAGTLAYFLWVKPSQDLKREQQERAAL 60
          M+S+WRRT+GNVRSFIGNSMGGLRGG+NLASWVVAGTLAYFLWVKPSQDLKREQQERAAL
Sbjct: 1  MSSNWRRTLGNVRSFIGNSMGGLRGGSNLASWVVAGTLAYFLWVKPSQDLKREQQERAAL 60

Query: 61 AATDPYRYIEKRKPIPDPQETGLIYGNKNKPK 92
          AA DPYRY+EKRKPIPDPQETGLIYGNKNK K
Sbjct: 61 AAADPYRYVEKRKPIPDPQETGLIYGNKNKTK 92

[Close]

BLAST of Cp4.1LG01g01620 vs. ExPASy TrEMBL
Match: A0A6J1DP57 (uncharacterized protein LOC111022900 OS=Momordica charantia OX=3673 GN=LOC111022900 PE=4 SV=1)

HSP 1 Score: 177 bits (449), Expect = 5.23e-56
Identity = 86/96 (89.58%), Postives = 91/96 (94.79%), Query Frame = 0


Query: 1  MASSWRRTVGNVRSFIGNSMGGLRGGTNLASWVVAGTLAYFLWVKPSQDLKREQQERAAL 60
          MASSWRR+ GNVRSFIGNSMGGLRGG+NLASW+VAGTLAYFLWVKPSQDLKREQQERAAL
Sbjct: 1  MASSWRRSFGNVRSFIGNSMGGLRGGSNLASWIVAGTLAYFLWVKPSQDLKREQQERAAL 60

Query: 61 AATDPYRYIEKRKPIPDPQETGLIYGNKNKPKISEE 96
          A TDP+RYIEKRKPIPDPQETGLIYGNKN P+  EE
Sbjct: 61 ADTDPHRYIEKRKPIPDPQETGLIYGNKNTPRKPEE 96

[Close]

BLAST of Cp4.1LG01g01620 vs. ExPASy TrEMBL
Match: A0A1S4DYR4 (uncharacterized protein LOC103492913 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103492913 PE=4 SV=1)

HSP 1 Score: 174 bits (442), Expect = 6.11e-55
Identity = 85/96 (88.54%), Postives = 89/96 (92.71%), Query Frame = 0


Query: 1  MASSWRRTVGNVRSFIGNSMGGLRGGTNLASWVVAGTLAYFLWVKPSQDLKREQQERAAL 60
          M SSWRR+ GNVRSFIGNSMGGLRGG NLASWVVAGTLAY+LWVKPSQDLKREQQERAAL
Sbjct: 1  MTSSWRRSFGNVRSFIGNSMGGLRGGANLASWVVAGTLAYYLWVKPSQDLKREQQERAAL 60

Query: 61 AATDPYRYIEKRKPIPDPQETGLIYGNKNKPKISEE 96
          AA DP+RYIEKRKPIPDPQETGLIYGNKN P+  EE
Sbjct: 61 AAVDPHRYIEKRKPIPDPQETGLIYGNKNTPQKPEE 96

[Close]

BLAST of Cp4.1LG01g01620 vs. ExPASy TrEMBL
Match: A0A0A0KZ01 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G089280 PE=4 SV=1)

HSP 1 Score: 174 bits (441), Expect = 8.96e-55
Identity = 84/95 (88.42%), Postives = 90/95 (94.74%), Query Frame = 0


Query: 2  ASSWRRTVGNVRSFIGNSMGGLRGGTNLASWVVAGTLAYFLWVKPSQDLKREQQERAALA 61
          +SSWRR++GNVRSFIGNSMGGLRGG NLASWVVAGTLAY+LWVKPSQDLKREQQERAALA
Sbjct: 3  SSSWRRSLGNVRSFIGNSMGGLRGGANLASWVVAGTLAYYLWVKPSQDLKREQQERAALA 62

Query: 62 ATDPYRYIEKRKPIPDPQETGLIYGNKNKPKISEE 96
          A DP+RYIEKRKPIPDPQETGLIYGNKN P+  EE
Sbjct: 63 AVDPHRYIEKRKPIPDPQETGLIYGNKNTPRKPEE 97

[Close]

BLAST of Cp4.1LG01g01620 vs. ExPASy TrEMBL
Match: A0A2H5PAE3 (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_118340 PE=4 SV=1)

HSP 1 Score: 173 bits (439), Expect = 1.75e-54
Identity = 82/96 (85.42%), Postives = 91/96 (94.79%), Query Frame = 0


Query: 1  MASSWRRTVGNVRSFIGNSMGGLRGGTNLASWVVAGTLAYFLWVKPSQDLKREQQERAAL 60
          MASSWRRT+GN+RSF+GNSMGG+RGG NLASWVVAGTLAY+LWVKPSQDLKREQ+ERAAL
Sbjct: 1  MASSWRRTIGNLRSFVGNSMGGVRGGANLASWVVAGTLAYYLWVKPSQDLKREQEERAAL 60

Query: 61 AATDPYRYIEKRKPIPDPQETGLIYGNKNKPKISEE 96
          AA DP RY+EKRKPIPDPQETGLIYGNKN+ + SEE
Sbjct: 61 AALDPNRYVEKRKPIPDPQETGLIYGNKNRSRKSEE 96

[Close]

BLAST of Cp4.1LG01g01620 vs. TAIR 10
Match: AT2G33585.1 (unknown protein; Has 31 Blast hits to 31 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 151.8 bits (382), Expect = 2.9e-37
Identity = 72/96 (75.00%), Postives = 82/96 (85.42%), Query Frame = 0


Query: 1   MASSWRRTVGNVRSFIGNSMGGLRGGTNLASWVVAGTLAYFLWVKPSQDLKREQQERAAL 60
           MASSWRR++GNVRSFIGNSMGGLRGG + ASWVVAGT+AYFLW+KP QDLK+EQ+ RAAL
Sbjct: 98  MASSWRRSIGNVRSFIGNSMGGLRGGQSAASWVVAGTIAYFLWIKPEQDLKKEQEARAAL 157

Query: 61  AATDPYRYIEKRKPIPDPQETGLIYGNKNKPKISEE 97
           A  D  +Y+EKRKPI DPQ TGLIYGNKN    SE+
Sbjct: 158 AMADTNQYVEKRKPIADPQVTGLIYGNKNGTDKSED 193

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g01620 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG01g01620 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6600390.1	2.01e-60	96.88	hypothetical protein SDJN03_05623, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7031052.1	8.12e-58	95.79	hypothetical protein SDJN02_05091, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_012073563.1	7.60e-56	92.39	uncharacterized protein LOC105635169 [Jatropha curcas] >KDP36738.1 hypothetical ...	[more]
XP_022155897.1	1.08e-55	89.58	uncharacterized protein LOC111022900 [Momordica charantia] >XP_022155898.1 uncha...	[more]
XP_011653322.1	4.40e-55	88.54	uncharacterized protein LOC101205325 isoform X2 [Cucumis sativus]	[more]

BLAST of Cp4.1LG01g01620 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A067KP46	3.68e-56	92.39	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_08029 PE=4 SV=1	[more]
A0A6J1DP57	5.23e-56	89.58	uncharacterized protein LOC111022900 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]
A0A1S4DYR4	6.11e-55	88.54	uncharacterized protein LOC103492913 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A0A0KZ01	8.96e-55	88.42	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G089280 PE=4 SV=1	[more]
A0A2H5PAE3	1.75e-54	85.42	Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_118340 PE=4 SV=1	[more]

BLAST of Cp4.1LG01g01620 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G33585.1	2.9e-37	75.00	unknown protein; Has 31 Blast hits to 31 proteins in 12 species: Archae - 0; Bac...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 71..96
None	No IPR available	PANTHER	PTHR37213	SUBTILISIN-LIKE PROTEASE	coord: 1..95
None	No IPR available	PANTHER	PTHR37213:SF1	SUBTILISIN-LIKE PROTEASE	coord: 1..95

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g01620.1	Cp4.1LG01g01620.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0008233	peptidase activity