Cp4.1LG01g01460 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG01g01460
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	multiple organellar RNA editing factor 8, chloroplastic/mitochondrial
Location	Cp4.1LG01: 2961494 .. 2965924 (-)
RNA-Seq Expression	Cp4.1LG01g01460
Synteny	Cp4.1LG01g01460

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAGGACTAAGCCCCAGATAAACCCTTGTCTTTGTCTCAAGCCCTCTCCAATGGCGACTCGGCTCTTGTACCGCTCGCTACCTAAAACCCTGATTTCGGCTTCCATATTCTCTCGTTCATTTCTCACTGCCACTGGAACGGCCTTATCCGCCTCTTCACACTCCTCTGCCTTTCTTCTCCGTCGCCTTCGTCCCCTCGCTGCTATAGTTGTCGCTGATTTCCGCGGCCTCTCTCCAGCGGCGAGCGCGAGCGCGAGGGAGTTCGCCACCAGTACCACTTCATCCTCTCTCAAAGATCCGAATCCGAACTGGTCTAATCGCCCACCCAAGGAGACCATATTACTTGATGGCTGTGATTTTGAGCACTGGCTCATTGTTATGGAGAAGCCAGAGGGCGATCCCACGAGGGATGAAATTATCGATAGCTATATCAAAACACTTGCCATGGTTGTCGGAAGGTCAAGTTTCGTTTTGATCGATTGTATTGAATCTGTTGGGTTACCCCGATGATTGCATTTAATTTTGTTTCTCTTGGCATTTTAGTGATTAGACTTGTATGTTTAGAACAAAGTGGTAAATTCTTTCGTTTGTCTTCTACAGCAACATTTCAAGATCGGACTCATCTGAAAGAAATATTTAACGTTTCGCTATTTGGTGTTTCTTATTGATACAGTGAGGAAGAAGCTAGGATGAAGATATACTCTGTTTCAACAAGGTGCTACTATGCATTTGGGTGCCTTGTTTCTGAAGAACTTTCTTACAAGATTAAAGGTATTATACCTTTGTTTGTGCCTTGTTTTCTTTTGTTTCCTTGTGTTTGTTATTTCTTTCTTTTGTGTTTGATTGTACTAAGTTTGTGCCTTTTCCTTCTCAGAGCTGCCTAAGGTTCGTTGGGTCCTTCCTGATTCATACTTGGATGTTAAGAATAAAGATTATGGAGGTAATTCCTTTTCGTATTAAGTTGAGAAAATTAGCATTTGACTTATTTCAGTGTCTAATGGTTATTGAAAGAGGTGACGGGAGATCCCACATTGGTTGAGGGGATTATAGAAGTGGTGTGAGATCCCACATCGGTTGGGAGGGGAACTGTTTATAAGGGTATGGAAACCTGTTTTAAATACTTTGAGGGAAAGCTCAAAGAGGACTACATCTACTAGCGGTGAGTTTGGTCGGTTACAAATGGTATCAAAGCTAGATATCAAGTGATGTGTTAGTGAGAACGCTGAGCCCCAAAGGGTGGTAGACATTGGGCGGTGTCCAACGAGGATGCTCGGCCCCAAAGGGGGTGGATTGTGAGATCCCACATTAATTGGAGAAAAGGGAACAAGTGCCAGTGAGGATGTTGGGTCTCAAAGGAGGTCGAAGGGGGAGTATTGTGAGATCCCACGGAACAAAGTAATTTTTATAAGGGTGTGCAAACCTCTATCTCTAGCTGACGCGTTTAAAAACTTTGAGTGAAAGTTTAAAAGGAAAAGTTCAAAGAGGATAATATCTGCTAGCGGTGTTGAGGAAAAGTTCAAAAGGAGAAGTCCAAAGGCCACAATATCTACTAGTGGTTGGTTTAAGGTTGGTTTAGGTTTAGGATCATGTTTCATCCAGGTAAGAACTGTGTATGAGATTAGAATGCACTCCTCCTGGACTGTTAGCAAAAGGAGCATTTGAATGGAAACACTAATCCTAATGTGTTTATTCGGTACAACACCAGACGAACAAAATTGGAAAGCTCTTATTTCTTGCGAATTCATAAAGCTAAAACTATTATCTGATGTTATTCATTCTTCTTCTTTTGGCAGGGGAGCCTTTTATAAATGGTCAGGCTGTTCCATATGACCCGAAGTACCATGAGGAATGGGTAAGAAACAATGCTAGAGCAAATGAAAGGAATAGGCGTAATTCAGACGGCTCAAGAAATTTCAATAGGAGGGAACATACCCGGAACAGAGAATTCCCAAATGCTTCACCTACTTCAGGAACAGCTCCAAGTAATATGCCACCTCGCAATCATGATGGATTGCCCCAAGGCAACTATAGCCGACCACCGCCGCCACCACCCAACACCTTTAGCCGGCCGCCGCCACCACCACCACCACCATCAAGCAACTTTAGCGGACCACCACCGCCACGACCCAACAACTTTAGTGGACCACCACCACCACCGAATAACTTTAGCAGACCACCTCCACCACCACAGAACAACTTTAGCGGACCACCACCACCACGACCACCGCAGAACAACTTTAGCGTACCACCACCGCACAACTATGCACCACCACCACCATACAACTCCGGGGCACCACCACCACCATACAACTCCGGGGCACCACCACCACCACCATACAACTCTGGAGAGCCACAGCCAAACAACCATTGGGGAGCACCACCGTCCAACTACTATGGTGGAGCTTCAAACACGGGTGGGCCACCTGCTCAAAACAGCTATAGAGAGATGCAGCCTAATGCTGGTGGGTGGTCTAGGAATGTGCATAACAATCAACGAGAATAGTCATAAACTGTTCAGGAAAGTCTCAAAGTAGCGGAATTCTTTGGTTTTTTAAGATTTACTTGTTGCTTGGTTCAAACCTGAAATCCTTCTGGCCACTGAGTATTTGTTCAGGTACTACTGCGGCAAACCATGAGTTTAGTTTTGCTTTGTGGGTAGTATAGTTTCAAAGATGCATGAGATGATGTAATAACATTCACAATGTCATCTATGTTTTTGGGCAATCTCATTTGTGCCCCCCTCAACTCTCCTGTATTGTGGCTCACTTACTGGTATGGCAATGGCAATAGTTCTCTAAACTTTTCTAGTTGAATCACAATTCGAATTATTTTTCCACCTTAACTTTGAGATAGTTTATCAATTCCTAAAGAAGAAAATTAGAGGAAAAATTTGAATTCAGAATTGTATCAAGGAACTTAGTATCTTTACATACCCGCACACAATTATGAAGCAGGCAGAGCAAAAGGCAAGCCATCTATCTGCTGCCATGGACGTGGAGCTCTTGCTCGATCGCTTATCAGAATCCATCCTGCAAAGTAAAACTTTTCAACTTCTTCTCACTACCTTTCTTCAAGTCGTCAAAAGCTCGTGAGCTGTAGCAGTTTCCCAAGCCTTTTTACTCGTGTCGAATTGAACAAGATTCTGCGACTCCAATGGATATAAATGTGCAGGAGTCAAGACAAGGATTACAGAAGTTTTGTGTGTGTGCGCGCGTGTGGGGTGTGAGTTTTGCAGAATTACTGTTAGTGATCTTATCACGTTGAACAAAACAAAAGAAACCTTTTGATCTCCCGGTGGAAAAGTGACATTGAAAGTGAAGAAAATTTTCTTCCTTTCAAGAAGAATCACTAACAAATAAGAACATAAGCTATTGATAAAAATGAAAAATCACCTTGGATGGGAGGAAAAGTCACCTTAAGACACCATAAAATTGTCTTCTTGCAAGCAGTGAAGGTCAGTCAAAAGTTATCTTTACGCTCCCCTGGTGCATTCGTACGACAAAGTAGAAGCTACAAGAATTTTGCAAGCTATAGATTCTGCTTTTCTGTTCTTGGCAAATTGAATTTGATCTGCCAGCGACACTTCTTCCCTCAGTTTACCCTTCTTTATAAGATCTAGATCCATTTTTTCCCAGGTTGTGCCTCGGGGCACCACTGATGCAACGCTTCCTTGAGCAGCAACTACACTGTTTATTGCAATCTTTTTGCGAATCTAATCAAAAGGTAAGTGAAAGAGGATAACCTTAATAGAAGACATGAAAACATAATAAGAACATCATTATCATAGGGCTGACAGATTAAAATGAAGGCTGGCCTAGAAATTTACATCTCCAAATAGCTATGGTAGGTTGGCCTTTGTTATAGATCAGTTCCATTGCATGCTATCATTTTGATCCATTTAGTGGATCAGTCAAACTATTAAGTAAATCTACGGGACCTCCCTGATCTTTACCTTCTTCAATCTTTGCTTAAGTCCCGATCTTTCAATTGCAGTTAGCTCCTTCATCGTTCTCTGGATGTCTTCTCCCTCTTTCATCTTTCTTTTTCCTCCTTTTCTTCTTCTAGAACACATTTTCCTTTTCTTTATTTTGGCACCCCTTCCTTGGATTTTTCTCTTTTTCGCATTCTCTGCTCTCATCAGCTTTAATTTTTCCTTCTCTTCAACCATTTTAAGCTTTTGATGAAGCATTTCTTGTATTATCTTGTCATGGCTGTCCCAGTCATGTTCTTGTTCTCCCTTCCCTCCTTTCTTCGCAGCAACAGCTATGCTTTCCTTCCAAGACTGGAAGAACGCCTCGTTTAATCTCTTCTTCAATAATCTCTTTCCCCATACACGTCTGAGTGAGGAGCTAATTTTAGTTTTGACCTGATCACTGCAAATAGAATAAAGCACGACTGTATCTTATAGCATGTTTATGCCTAATAAACAGACG

mRNA sequence

GAGGACTAAGCCCCAGATAAACCCTTGTCTTTGTCTCAAGCCCTCTCCAATGGCGACTCGGCTCTTGTACCGCTCGCTACCTAAAACCCTGATTTCGGCTTCCATATTCTCTCGTTCATTTCTCACTGCCACTGGAACGGCCTTATCCGCCTCTTCACACTCCTCTGCCTTTCTTCTCCGTCGCCTTCGTCCCCTCGCTGCTATAGTTGTCGCTGATTTCCGCGGCCTCTCTCCAGCGGCGAGCGCGAGCGCGAGGGAGTTCGCCACCAGTACCACTTCATCCTCTCTCAAAGATCCGAATCCGAACTGGTCTAATCGCCCACCCAAGGAGACCATATTACTTGATGGCTGTGATTTTGAGCACTGGCTCATTGTTATGGAGAAGCCAGAGGGCGATCCCACGAGGGATGAAATTATCGATAGCTATATCAAAACACTTGCCATGGTTGTCGGAAGTGAGGAAGAAGCTAGGATGAAGATATACTCTGTTTCAACAAGGTGCTACTATGCATTTGGGTGCCTTGTTTCTGAAGAACTTTCTTACAAGATTAAAGAGCTGCCTAAGGTTCGTTGGGTCCTTCCTGATTCATACTTGGATGTTAAGAATAAAGATTATGGAGGGGAGCCTTTTATAAATGGTCAGGCTGTTCCATATGACCCGAAGTACCATGAGGAATGGGTAAGAAACAATGCTAGAGCAAATGAAAGGAATAGGCGTAATTCAGACGGCTCAAGAAATTTCAATAGGAGGGAACATACCCGGAACAGAGAATTCCCAAATGCTTCACCTACTTCAGGAACAGCTCCAAGTAATATGCCACCTCGCAATCATGATGGATTGCCCCAAGGCAACTATAGCCGACCACCGCCGCCACCACCCAACACCTTTAGCCGGCCGCCGCCACCACCACCACCACCATCAAGCAACTTTAGCGGACCACCACCGCCACGACCCAACAACTTTAGTGGACCACCACCACCACCGAATAACTTTAGCAGACCACCTCCACCACCACAGAACAACTTTAGCGGACCACCACCACCACGACCACCGCAGAACAACTTTAGCGTACCACCACCGCACAACTATGCACCACCACCACCATACAACTCCGGGGCACCACCACCACCATACAACTCCGGGGCACCACCACCACCACCATACAACTCTGGAGAGCCACAGCCAAACAACCATTGGGGAGCACCACCGTCCAACTACTATGGTGGAGCTTCAAACACGGGTGGGCCACCTGCTCAAAACAGCTATAGAGAGATGCAGCCTAATGCTGGTGGGTGGTCTAGGAATGTGCATAACAATCAACGAGAATAGTCATAAACTGTTCAGGAAAGTCTCAAAGTAGCGGAATTCTTTGGTTTTTTAAGATTTACTTGTTGCTTGGTTCAAACCTGAAATCCTTCTGGCCACTGAGTATTTGTTCAGGTACTACTGCGGCAAACCATGAGTTTAGTTTTGCTTTGTGGGTAGTATAGTTTCAAAGATGCATGAGATGATGTAATAACATTCACAATGTCATCTATGTTTTTGGGCAATCTCATTTGTGCCCCCCTCAACTCTCCTGTATTGTGGCTCACTTACTGGTATGGCAATGGCAATAGTTCTCTAAACTTTTCTAGTTGAATCACAATTCGAATTATTTTTCCACCTTAACTTTGAGATAGTTTATCAATTCCTAAAGAAGAAAATTAGAGGAAAAATTTGAATTCAGAATTGTATCAAGGAACTTAGTATCTTTACATACCCGCACACAATTATGAAGCAGGCAGAGCAAAAGGCAAGCCATCTATCTGCTGCCATGGACGTGGAGCTCTTGCTCGATCGCTTATCAGAATCCATCCTGCAAAGTAAAACTTTTCAACTTCTTCTCACTACCTTTCTTCAAGTCGTCAAAAGCTCGTGAGCTGTAGCAGTTTCCCAAGCCTTTTTACTCGTGTCGAATTGAACAAGATTCTGCGACTCCAATGGATATAAATGTGCAGGAGTCAAGACAAGGATTACAGAAGTTTTGTGTGTGTGCGCGCGTGTGGGGTGTGAGTTTTGCAGAATTACTGTTAGTGATCTTATCACGTTGAACAAAACAAAAGAAACCTTTTGATCTCCCGGTGGAAAAGTGACATTGAAAGTGAAGAAAATTTTCTTCCTTTCAAGAAGAATCACTAACAAATAAGAACATAAGCTATTGATAAAAATGAAAAATCACCTTGGATGGGAGGAAAAGTCACCTTAAGACACCATAAAATTGTCTTCTTGCAAGCAGTGAAGGTCAGTCAAAAGTTATCTTTACGCTCCCCTGGTGCATTCGTACGACAAAGTAGAAGCTACAAGAATTTTGCAAGCTATAGATTCTGCTTTTCTGTTCTTGGCAAATTGAATTTGATCTGCCAGCGACACTTCTTCCCTCAGTTTACCCTTCTTTATAAGATCTAGATCCATTTTTTCCCAGGTTGTGCCTCGGGGCACCACTGATGCAACGCTTCCTTGAGCAGCAACTACACTGTTTATTGCAATCTTTTTGCGAATCTAATCAAAAGGTAAGTGAAAGAGGATAACCTTAATAGAAGACATGAAAACATAATAAGAACATCATTATCATAGGGCTGACAGATTAAAATGAAGGCTGGCCTAGAAATTTACATCTCCAAATAGCTATGGTAGGTTGGCCTTTGTTATAGATCAGTTCCATTGCATGCTATCATTTTGATCCATTTAGTGGATCAGTCAAACTATTAAGTAAATCTACGGGACCTCCCTGATCTTTACCTTCTTCAATCTTTGCTTAAGTCCCGATCTTTCAATTGCAGTTAGCTCCTTCATCGTTCTCTGGATGTCTTCTCCCTCTTTCATCTTTCTTTTTCCTCCTTTTCTTCTTCTAGAACACATTTTCCTTTTCTTTATTTTGGCACCCCTTCCTTGGATTTTTCTCTTTTTCGCATTCTCTGCTCTCATCAGCTTTAATTTTTCCTTCTCTTCAACCATTTTAAGCTTTTGATGAAGCATTTCTTGTATTATCTTGTCATGGCTGTCCCAGTCATGTTCTTGTTCTCCCTTCCCTCCTTTCTTCGCAGCAACAGCTATGCTTTCCTTCCAAGACTGGAAGAACGCCTCGTTTAATCTCTTCTTCAATAATCTCTTTCCCCATACACGTCTGAGTGAGGAGCTAATTTTAGTTTTGACCTGATCACTGCAAATAGAATAAAGCACGACTGTATCTTATAGCATGTTTATGCCTAATAAACAGACG

Coding sequence (CDS)

ATGGCGACTCGGCTCTTGTACCGCTCGCTACCTAAAACCCTGATTTCGGCTTCCATATTCTCTCGTTCATTTCTCACTGCCACTGGAACGGCCTTATCCGCCTCTTCACACTCCTCTGCCTTTCTTCTCCGTCGCCTTCGTCCCCTCGCTGCTATAGTTGTCGCTGATTTCCGCGGCCTCTCTCCAGCGGCGAGCGCGAGCGCGAGGGAGTTCGCCACCAGTACCACTTCATCCTCTCTCAAAGATCCGAATCCGAACTGGTCTAATCGCCCACCCAAGGAGACCATATTACTTGATGGCTGTGATTTTGAGCACTGGCTCATTGTTATGGAGAAGCCAGAGGGCGATCCCACGAGGGATGAAATTATCGATAGCTATATCAAAACACTTGCCATGGTTGTCGGAAGTGAGGAAGAAGCTAGGATGAAGATATACTCTGTTTCAACAAGGTGCTACTATGCATTTGGGTGCCTTGTTTCTGAAGAACTTTCTTACAAGATTAAAGAGCTGCCTAAGGTTCGTTGGGTCCTTCCTGATTCATACTTGGATGTTAAGAATAAAGATTATGGAGGGGAGCCTTTTATAAATGGTCAGGCTGTTCCATATGACCCGAAGTACCATGAGGAATGGGTAAGAAACAATGCTAGAGCAAATGAAAGGAATAGGCGTAATTCAGACGGCTCAAGAAATTTCAATAGGAGGGAACATACCCGGAACAGAGAATTCCCAAATGCTTCACCTACTTCAGGAACAGCTCCAAGTAATATGCCACCTCGCAATCATGATGGATTGCCCCAAGGCAACTATAGCCGACCACCGCCGCCACCACCCAACACCTTTAGCCGGCCGCCGCCACCACCACCACCACCATCAAGCAACTTTAGCGGACCACCACCGCCACGACCCAACAACTTTAGTGGACCACCACCACCACCGAATAACTTTAGCAGACCACCTCCACCACCACAGAACAACTTTAGCGGACCACCACCACCACGACCACCGCAGAACAACTTTAGCGTACCACCACCGCACAACTATGCACCACCACCACCATACAACTCCGGGGCACCACCACCACCATACAACTCCGGGGCACCACCACCACCACCATACAACTCTGGAGAGCCACAGCCAAACAACCATTGGGGAGCACCACCGTCCAACTACTATGGTGGAGCTTCAAACACGGGTGGGCCACCTGCTCAAAACAGCTATAGAGAGATGCAGCCTAATGCTGGTGGGTGGTCTAGGAATGTGCATAACAATCAACGAGAATAG

Protein sequence

MATRLLYRSLPKTLISASIFSRSFLTATGTALSASSHSSAFLLRRLRPLAAIVVADFRGLSPAASASAREFATSTTSSSLKDPNPNWSNRPPKETILLDGCDFEHWLIVMEKPEGDPTRDEIIDSYIKTLAMVVGSEEEARMKIYSVSTRCYYAFGCLVSEELSYKIKELPKVRWVLPDSYLDVKNKDYGGEPFINGQAVPYDPKYHEEWVRNNARANERNRRNSDGSRNFNRREHTRNREFPNASPTSGTAPSNMPPRNHDGLPQGNYSRPPPPPPNTFSRPPPPPPPPSSNFSGPPPPRPNNFSGPPPPPNNFSRPPPPPQNNFSGPPPPRPPQNNFSVPPPHNYAPPPPYNSGAPPPPYNSGAPPPPPYNSGEPQPNNHWGAPPSNYYGGASNTGGPPAQNSYREMQPNAGGWSRNVHNNQRE

Homology

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BLAST of Cp4.1LG01g01460 vs. ExPASy Swiss-Prot
Match: Q9LKA5 (Multiple organellar RNA editing factor 8, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MORF8 PE=1 SV=1)

HSP 1 Score: 328.6 bits (841), Expect = 1.1e-88
Identity = 234/430 (54.42%), Postives = 265/430 (61.63%), Query Frame = 0


Query: 1   MATRLLYRSL---PKTLISASIFSRSFLTATGTALSASSHSSAFLLRRLRPLAAIVVADF 60
           MAT  + RS+   P   +S  +F+RSF ++   A S +S     LL R RPL A   + F
Sbjct: 1   MATHTISRSILCRPAKSLS-FLFTRSFASSAPLAKSPASS----LLSRSRPLVAAFSSVF 60

Query: 61  RGLSPAASASAREFATSTTSSSLKDPNPNWSNRPPKETILLDGCDFEHWLIVMEKPEGDP 120
           RG       S +  +T  TSSSL DPNPNWSNRPPKETILLDGCDFEHWL+V+E P+G+P
Sbjct: 61  RG----GLVSVKGLSTQATSSSLNDPNPNWSNRPPKETILLDGCDFEHWLVVVEPPQGEP 120

Query: 121 TRDEIIDSYIKTLAMVVGSEEEARMKIYSVSTRCYYAFGCLVSEELSYKIKELPKVRWVL 180
           TRDEIIDSYIKTLA +VGSE+EARMKIYSVSTRCYYAFG LVSE+LS+K+KEL  VRWVL
Sbjct: 121 TRDEIIDSYIKTLAQIVGSEDEARMKIYSVSTRCYYAFGALVSEDLSHKLKELSNVRWVL 180

Query: 181 PDSYLDVKNKDYGGEPFINGQAVPYDPKYHEEWVRNNARANERNR-----RNSDGSRNFN 240
           PDSYLDV+NKDYGGEPFI+G+AVPYDPKYHEEW+RNNARANERNR     RN+D SRNF 
Sbjct: 181 PDSYLDVRNKDYGGEPFIDGKAVPYDPKYHEEWIRNNARANERNRRNDRPRNNDRSRNFE 240

Query: 241 RREHTRNREFPNASPTSGTAPSNMPPRNHDGLPQGNYSRPPPPPPNTFSRPPPPPPPPSS 300
           RR              +G  P   PP              PPPPP+        PPPP  
Sbjct: 241 RRREN----------MAGGPPPQRPPMG-----------GPPPPPHIGG---SAPPPPHM 300

Query: 301 NFSGPPPPRPNNFSGPPPPPN--NFSRPPP---PPQNNFSGPPPPRPPQNNFSVPPPHNY 360
             S PPPP      GPPPP N      PPP   PPQNN  G   PRPPQN    PPP+  
Sbjct: 301 GGSAPPPPHMGQNYGPPPPNNMGGPRHPPPYGAPPQNNMGG---PRPPQNYGGTPPPNYG 360

Query: 361 APPPPYNSGAPPPPYNSGAPPPPPYNSGEPQPNNHWGAPP--SNYYGGASNTGGPPAQNS 416
             PP  N G  PPP N G  PPP Y  G   P  + GAPP  +NY    S    P  QN+
Sbjct: 361 GAPPANNMGGAPPP-NYGGGPPPQY--GAVPPPQYGGAPPQNNNYQQQGSGMQQPQYQNN 388

[Close]

BLAST of Cp4.1LG01g01460 vs. ExPASy Swiss-Prot
Match: Q84JZ6 (Multiple organellar RNA editing factor 3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MORF3 PE=1 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 4.0e-43
Identity = 116/251 (46.22%), Postives = 143/251 (56.97%), Query Frame = 0


Query: 4   RLLYRSLPKTLISASIFSRSFLTATGTALSASSHSSAFLLRRLRPLAAIVVADFRGLSPA 63
           R L   L KTL S++ +S SF T     LS+ S       R   PL   V +    L P 
Sbjct: 8   RTLSTLLNKTLSSSTSYSSSFPT-----LSSRS-------RFAMPLIEKVSSSRTSLGP- 67

Query: 64  ASASAREFATSTTSSSLKDPNPNWSNRPPKETILLDGCDFEHWLIVMEKPEGDPTRDEII 123
              S R   + +  S L DP+PNWSNRPPKETILLDGCD+EHWLIVME  +  PT +E+I
Sbjct: 68  CYISTRPKTSGSGYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVMEFTDPKPTEEEMI 127

Query: 124 DSYIKTLAMVVGSEEEARMKIYSVSTRCYYAFGCLVSEELSYKIKELPKVRWVLPDSYLD 183
           +SY+KTL  V+G EEEA+ KIYSV T  Y  FG L+SEELS K+K LP V WVLPDSYLD
Sbjct: 128 NSYVKTLTSVLGCEEEAKKKIYSVCTSTYTGFGALISEELSCKVKALPGVLWVLPDSYLD 187

Query: 184 VKNKDYGGEPFINGQAVPYDPKYHEEWVRNNARANERNRRNSDGSRNFNRREHTRNREFP 243
           V NKDYGG+ ++ G+ +P       E      R   R  R  + +    RRE +     P
Sbjct: 188 VPNKDYGGDLYVEGKVIPRPQYRFTEQRHTRPRPRPRYDRRRE-TMQVERREPSMGLHSP 243

Query: 244 NASPTSGTAPS 255
             +P     PS
Sbjct: 248 -VNPGEFNKPS 243

[Close]

BLAST of Cp4.1LG01g01460 vs. ExPASy Swiss-Prot
Match: Q9CAH0 (Multiple organellar RNA editing factor 7, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MORF7 PE=1 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 6.0e-39
Identity = 86/197 (43.65%), Postives = 123/197 (62.44%), Query Frame = 0


Query: 47  RPLAAIVVADFRGLSPAASASAREFATSTTSSSLKDPNPNWSN--RPPKETILLDGCDFE 106
           RPL       FR LSP +  S         S S+     +WS   R P    L++GCD++
Sbjct: 7   RPLNLTAAVRFR-LSPLSPFSG-------NSGSINSETTSWSELIRVPS---LVEGCDYK 66

Query: 107 HWLIVMEKPEGDPTRDEIIDSYIKTLAMVVGSEEEARMKIYSVSTRCYYAFGCLVSEELS 166
           HWL++M+ P G PTR+ I+ S+++TLAM +GSEEEA+  IYSVST+ YYAFGC + E L+
Sbjct: 67  HWLVLMKPPNGYPTRNHIVQSFVETLAMALGSEEEAKRSIYSVSTKYYYAFGCRIHEPLT 126

Query: 167 YKIKELPKVRWVLPDSYLDVKNKDYGGEPFINGQAVPYDPKYHEEWVRNNARANERNRRN 226
           YKI+ LP V+WVLPDS++   +  YGGEPF++G+ VPYD KYH +W+        R++ +
Sbjct: 127 YKIRSLPDVKWVLPDSFIVDGDNRYGGEPFVDGEVVPYDEKYHADWL--------RDQTD 184

Query: 227 SDGSRNFNRREHTRNRE 242
            D      +++H R R+
Sbjct: 187 EDAKSGVVKKKHRRKRK 184

[Close]

BLAST of Cp4.1LG01g01460 vs. ExPASy Swiss-Prot
Match: O22793 (Multiple organellar RNA editing factor 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MORF2 PE=1 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 2.6e-34
Identity = 81/155 (52.26%), Postives = 105/155 (67.74%), Query Frame = 0


Query: 86  NWSNRPPKETI-LLDGCDFEHWLIVMEKPEGD-PTRDEIIDSYIKTLAMVVGSEEEARMK 145
           N+S+RPP E   L  GCD+EHWLIVM+KP G+  T+ ++ID YI+TLA VVGSEEEA+ +
Sbjct: 66  NFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAKVVGSEEEAKKR 125

Query: 146 IYSVSTRCYYAFGCLVSEELSYKIKELPKVRWVLPDSYLDVKNKDYGGEPFINGQAVPYD 205
           IY+VS   Y  FGC + EE S K++ LP V +VLPDSY+D +NKDYG E F+NG+ V   
Sbjct: 126 IYNVSCERYLGFGCEIDEETSTKLEGLPGVLFVLPDSYVDPENKDYGAELFVNGEIVQRS 185

Query: 206 PKYHEEWVRNNARANERNRRNSDGSRNFNRREHTR 239
           P+          RA +R R N D +R   RRE+TR
Sbjct: 186 PERQRRVEPQPQRAQDRPRYN-DRTRYSRRRENTR 219

[Close]

BLAST of Cp4.1LG01g01460 vs. ExPASy Swiss-Prot
Match: O82169 (Multiple organellar RNA editing factor 6, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MORF6 PE=1 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 4.4e-34
Identity = 92/225 (40.89%), Postives = 126/225 (56.00%), Query Frame = 0


Query: 16  SASIFSRSFLTATGTALSASSHSSAFLLRRLRPLAAIVVADFRGLSPAASASAREFATST 75
           +AS  ++ F + +    S S   S  + RR  P     V     L+   +   R   +  
Sbjct: 9   TASCVAKRFFSTSNAVASPSPLPSHLISRRFSPTIFHAVGYIPALTRFTTIRTRMDRSGG 68

Query: 76  TSSSLKDPNPNWSNRPPKETI-LLDGCDFEHWLIVMEKPEGD-PTRDEIIDSYIKTLAMV 135
           + S LK    N+S+RPP E   L  GCD+EHWLIVMEKP G+   + ++ID Y++TLA +
Sbjct: 69  SYSPLKS-GSNFSDRPPTEMAPLFPGCDYEHWLIVMEKPGGENAQKQQMIDCYVQTLAKI 128

Query: 136 VGSEEEARMKIYSVSTRCYYAFGCLVSEELSYKIKELPKVRWVLPDSYLDVKNKDYGGEP 195
           VGSEEEAR KIY+VS   Y+ FGC + EE S K++ LP V +VLPDSY+D + KDYG E 
Sbjct: 129 VGSEEEARKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDPEFKDYGAEL 188

Query: 196 FINGQAVPYDPKYHEEWVRNNARANERNRRNSDGSRNFNRREHTR 239
           F+NG+ VP  P+     V    +      +  D  RN  RRE+ R
Sbjct: 189 FVNGEVVPRPPERQRRMVELTNQRGSDKPKYHDRIRNVRRRENMR 232

[Close]

BLAST of Cp4.1LG01g01460 vs. NCBI nr
Match: XP_023514966.1 (multiple organellar RNA editing factor 8, chloroplastic/mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 825 bits (2130), Expect = 5.47e-301
Identity = 426/426 (100.00%), Postives = 426/426 (100.00%), Query Frame = 0


Query: 1   MATRLLYRSLPKTLISASIFSRSFLTATGTALSASSHSSAFLLRRLRPLAAIVVADFRGL 60
           MATRLLYRSLPKTLISASIFSRSFLTATGTALSASSHSSAFLLRRLRPLAAIVVADFRGL
Sbjct: 1   MATRLLYRSLPKTLISASIFSRSFLTATGTALSASSHSSAFLLRRLRPLAAIVVADFRGL 60

Query: 61  SPAASASAREFATSTTSSSLKDPNPNWSNRPPKETILLDGCDFEHWLIVMEKPEGDPTRD 120
           SPAASASAREFATSTTSSSLKDPNPNWSNRPPKETILLDGCDFEHWLIVMEKPEGDPTRD
Sbjct: 61  SPAASASAREFATSTTSSSLKDPNPNWSNRPPKETILLDGCDFEHWLIVMEKPEGDPTRD 120

Query: 121 EIIDSYIKTLAMVVGSEEEARMKIYSVSTRCYYAFGCLVSEELSYKIKELPKVRWVLPDS 180
           EIIDSYIKTLAMVVGSEEEARMKIYSVSTRCYYAFGCLVSEELSYKIKELPKVRWVLPDS
Sbjct: 121 EIIDSYIKTLAMVVGSEEEARMKIYSVSTRCYYAFGCLVSEELSYKIKELPKVRWVLPDS 180

Query: 181 YLDVKNKDYGGEPFINGQAVPYDPKYHEEWVRNNARANERNRRNSDGSRNFNRREHTRNR 240
           YLDVKNKDYGGEPFINGQAVPYDPKYHEEWVRNNARANERNRRNSDGSRNFNRREHTRNR
Sbjct: 181 YLDVKNKDYGGEPFINGQAVPYDPKYHEEWVRNNARANERNRRNSDGSRNFNRREHTRNR 240

Query: 241 EFPNASPTSGTAPSNMPPRNHDGLPQGNYSRPPPPPPNTFSRPPPPPPPPSSNFSGPPPP 300
           EFPNASPTSGTAPSNMPPRNHDGLPQGNYSRPPPPPPNTFSRPPPPPPPPSSNFSGPPPP
Sbjct: 241 EFPNASPTSGTAPSNMPPRNHDGLPQGNYSRPPPPPPNTFSRPPPPPPPPSSNFSGPPPP 300

Query: 301 RPNNFSGPPPPPNNFSRPPPPPQNNFSGPPPPRPPQNNFSVPPPHNYAPPPPYNSGAPPP 360
           RPNNFSGPPPPPNNFSRPPPPPQNNFSGPPPPRPPQNNFSVPPPHNYAPPPPYNSGAPPP
Sbjct: 301 RPNNFSGPPPPPNNFSRPPPPPQNNFSGPPPPRPPQNNFSVPPPHNYAPPPPYNSGAPPP 360

Query: 361 PYNSGAPPPPPYNSGEPQPNNHWGAPPSNYYGGASNTGGPPAQNSYREMQPNAGGWSRNV 420
           PYNSGAPPPPPYNSGEPQPNNHWGAPPSNYYGGASNTGGPPAQNSYREMQPNAGGWSRNV
Sbjct: 361 PYNSGAPPPPPYNSGEPQPNNHWGAPPSNYYGGASNTGGPPAQNSYREMQPNAGGWSRNV 420

Query: 421 HNNQRE 426
           HNNQRE
Sbjct: 421 HNNQRE 426

[Close]

BLAST of Cp4.1LG01g01460 vs. NCBI nr
Match: XP_022941886.1 (multiple organellar RNA editing factor 8, chloroplastic/mitochondrial isoform X2 [Cucurbita moschata])

HSP 1 Score: 773 bits (1995), Expect = 1.25e-280
Identity = 407/426 (95.54%), Postives = 411/426 (96.48%), Query Frame = 0


Query: 1   MATRLLYRSLPKTLISASIFSRSFLTATGTALSASSHSSAFLLRRLRPLAAIVVADFRGL 60
           MATRL YRSLPKTLISASIFSRSFLTATGTALSASSHSSA+LLRRLRPLAAIVVADFRGL
Sbjct: 1   MATRLFYRSLPKTLISASIFSRSFLTATGTALSASSHSSAYLLRRLRPLAAIVVADFRGL 60

Query: 61  SPAASASAREFATSTTSSSLKDPNPNWSNRPPKETILLDGCDFEHWLIVMEKPEGDPTRD 120
           SPAASA  REFATST SSSLKDPNPNWSNRPPKETILLDGCDFEHWLIVMEKPEGDPTRD
Sbjct: 61  SPAASA--REFATSTASSSLKDPNPNWSNRPPKETILLDGCDFEHWLIVMEKPEGDPTRD 120

Query: 121 EIIDSYIKTLAMVVGSEEEARMKIYSVSTRCYYAFGCLVSEELSYKIKELPKVRWVLPDS 180
           EIIDS+IKTLAMVVGSEEEARMKIYSVSTRCYYAFGCLVSEELSYKIKELPKVRWVLPDS
Sbjct: 121 EIIDSFIKTLAMVVGSEEEARMKIYSVSTRCYYAFGCLVSEELSYKIKELPKVRWVLPDS 180

Query: 181 YLDVKNKDYGGEPFINGQAVPYDPKYHEEWVRNNARANERNRRNSDGSRNFNRREHTRNR 240
           YLDVKNKDYGGEPFINGQAVPYDPKYHEEWVRNNARANERNRRNSDGSRNFNRREHTRNR
Sbjct: 181 YLDVKNKDYGGEPFINGQAVPYDPKYHEEWVRNNARANERNRRNSDGSRNFNRREHTRNR 240

Query: 241 EFPNASPTSGTAPSNMPPRNHDGLPQGNYSRPPPPPPNTFSRPPPPPPPPSSNFSGPPPP 300
           EFPNASPTSGTAPSNMPPRNHDG+PQGNYSRPPPPPPNTFSRPPPPPPPPS +FSGPPPP
Sbjct: 241 EFPNASPTSGTAPSNMPPRNHDGMPQGNYSRPPPPPPNTFSRPPPPPPPPS-HFSGPPPP 300

Query: 301 RPNNFSGPPPPPNNFSRPPPPPQNNFSGPPPPRPPQNNFSVPPPHNYAPPPPYNSGAPPP 360
           RPNNFSGPPPPPNNFSRPPPPPQNNFSGPPPP PPQNNFSVPPPHNYA         PPP
Sbjct: 301 RPNNFSGPPPPPNNFSRPPPPPQNNFSGPPPP-PPQNNFSVPPPHNYA---------PPP 360

Query: 361 PYNSGAPPPPPYNSGEPQPNNHWGAPPSNYYGGASNTGGPPAQNSYREMQPNAGGWSRNV 420
           PYNSGAPPPPPYNSGEPQPNNHWGAPPSNYYGGASNTGGPPAQNSYREMQPNAGGWSRNV
Sbjct: 361 PYNSGAPPPPPYNSGEPQPNNHWGAPPSNYYGGASNTGGPPAQNSYREMQPNAGGWSRNV 413

Query: 421 HNNQRE 426
           HNNQRE
Sbjct: 421 HNNQRE 413

[Close]

BLAST of Cp4.1LG01g01460 vs. NCBI nr
Match: XP_022941885.1 (multiple organellar RNA editing factor 8, chloroplastic/mitochondrial isoform X1 [Cucurbita moschata])

HSP 1 Score: 760 bits (1962), Expect = 3.05e-275
Identity = 407/448 (90.85%), Postives = 411/448 (91.74%), Query Frame = 0


Query: 1   MATRLLYRSLPKTLISASIFSRSFLTATGTALSASSHSSAFLLRRLRPLAAIVVADFRGL 60
           MATRL YRSLPKTLISASIFSRSFLTATGTALSASSHSSA+LLRRLRPLAAIVVADFRGL
Sbjct: 1   MATRLFYRSLPKTLISASIFSRSFLTATGTALSASSHSSAYLLRRLRPLAAIVVADFRGL 60

Query: 61  SPAASASAREFATSTTSSSLKDPNPNWSNRPPKETILLDGCDFEHWLIVMEKPEGDPTRD 120
           SPAASA  REFATST SSSLKDPNPNWSNRPPKETILLDGCDFEHWLIVMEKPEGDPTRD
Sbjct: 61  SPAASA--REFATSTASSSLKDPNPNWSNRPPKETILLDGCDFEHWLIVMEKPEGDPTRD 120

Query: 121 EIIDSYIKTLAMVVGSEEEARMKIYSVSTRCYYAFGCLVSEELSYKIKELPKVRWVLPDS 180
           EIIDS+IKTLAMVVGSEEEARMKIYSVSTRCYYAFGCLVSEELSYKIKELPKVRWVLPDS
Sbjct: 121 EIIDSFIKTLAMVVGSEEEARMKIYSVSTRCYYAFGCLVSEELSYKIKELPKVRWVLPDS 180

Query: 181 YLDVKNKDYGGEPFINGQAVPYDPKYHEEWVRNNARANERNRRNSDGSRNFNRREHTRNR 240
           YLDVKNKDYGGEPFINGQAVPYDPKYHEEWVRNNARANERNRRNSDGSRNFNRREHTRNR
Sbjct: 181 YLDVKNKDYGGEPFINGQAVPYDPKYHEEWVRNNARANERNRRNSDGSRNFNRREHTRNR 240

Query: 241 EFPNASPTSGTAPSNMPPRNHDGLPQGNYSRPPPPPPNTFSRPPPPPPPPSSNFSGPPPP 300
           EFPNASPTSGTAPSNMPPRNHDG+PQGNYSRPPPPPPNTFSRPPPPPPPPS +FSGPPPP
Sbjct: 241 EFPNASPTSGTAPSNMPPRNHDGMPQGNYSRPPPPPPNTFSRPPPPPPPPS-HFSGPPPP 300

Query: 301 RPNNFSGPPPPPNNFSRPPPP----------------------PQNNFSGPPPPRPPQNN 360
           RPNNFSGPPPPPNNFSRPPPP                      PQNNFSGPPPP PPQNN
Sbjct: 301 RPNNFSGPPPPPNNFSRPPPPNNFSRPPPPPPPNNFSRPPPPPPQNNFSGPPPP-PPQNN 360

Query: 361 FSVPPPHNYAPPPPYNSGAPPPPYNSGAPPPPPYNSGEPQPNNHWGAPPSNYYGGASNTG 420
           FSVPPPHNYA         PPPPYNSGAPPPPPYNSGEPQPNNHWGAPPSNYYGGASNTG
Sbjct: 361 FSVPPPHNYA---------PPPPYNSGAPPPPPYNSGEPQPNNHWGAPPSNYYGGASNTG 420

Query: 421 GPPAQNSYREMQPNAGGWSRNVHNNQRE 426
           GPPAQNSYREMQPNAGGWSRNVHNNQRE
Sbjct: 421 GPPAQNSYREMQPNAGGWSRNVHNNQRE 435

[Close]

BLAST of Cp4.1LG01g01460 vs. NCBI nr
Match: KAG7031062.1 (Multiple organellar RNA editing factor 8, chloroplastic/mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 756 bits (1952), Expect = 6.74e-274
Identity = 404/437 (92.45%), Postives = 408/437 (93.36%), Query Frame = 0


Query: 1   MATRLLYRSLPKTLISASIFSRSFLTATGTALSASSHSSAFLLRRLRPLAAIVVADFRGL 60
           MATRL YRSLPKTLISASIFSRSFLTATGTALSASSHSSA LLRRLRPLAAIVVADFRGL
Sbjct: 1   MATRLFYRSLPKTLISASIFSRSFLTATGTALSASSHSSASLLRRLRPLAAIVVADFRGL 60

Query: 61  SPAASASAREFATSTTSSSLKDPNPNWSNRPPKETILLDGCDFEHWLIVMEKPEGDPTRD 120
           SPAASA  REFATSTTSSSLKDPNPNWSNRPPKETILLDGCDFEHWLIVMEKPEGDPTRD
Sbjct: 61  SPAASA--REFATSTTSSSLKDPNPNWSNRPPKETILLDGCDFEHWLIVMEKPEGDPTRD 120

Query: 121 EIIDSYIKTLAMVVGSEEEARMKIYSVSTRCYYAFGCLVSEELSYKIKELPKVRWVLPDS 180
           EIIDS+IKTLAMVVGSEEEARMKIYSVSTRCYYAFGCLVSEELSYKIKELPKVRWVLPDS
Sbjct: 121 EIIDSFIKTLAMVVGSEEEARMKIYSVSTRCYYAFGCLVSEELSYKIKELPKVRWVLPDS 180

Query: 181 YLDVKNKDYGGEPFINGQAVPYDPKYHEEWVRNNARANERNRRNSDGSRNFNRREHTRNR 240
           YLDVKNKDYGGEPFINGQAVPYDPKYHEEWVRNNARANERNRRNSDGSRNFNRREHTRNR
Sbjct: 181 YLDVKNKDYGGEPFINGQAVPYDPKYHEEWVRNNARANERNRRNSDGSRNFNRREHTRNR 240

Query: 241 EFPNASPTSGTAPSNMPPRNHDGLPQGNYSRPPPPPPNTFSRPPPPPPPPSSNFSGPPPP 300
           EFPNASPTSG APSNMPPRNHDG+PQGNY+RPPPPPPNTFSRPPPPPPPPS +FSGPPPP
Sbjct: 241 EFPNASPTSGPAPSNMPPRNHDGMPQGNYTRPPPPPPNTFSRPPPPPPPPS-HFSGPPPP 300

Query: 301 RPNNFSGPPPPPNNFSRPPPPP-----------QNNFSGPPPPRPPQNNFSVPPPHNYAP 360
           RPNNFSGPPPPPNNFSRPPPPP           QNNFSGPPPP PPQNNFSVPPPHNYA 
Sbjct: 301 RPNNFSGPPPPPNNFSRPPPPPPNNFSRPPPPPQNNFSGPPPP-PPQNNFSVPPPHNYA- 360

Query: 361 PPPYNSGAPPPPYNSGAPPPPPYNSGEPQPNNHWGAPPSNYYGGASNTGGPPAQNSYREM 420
                   PPPPYNSGAPPPPPYNSGEPQPNNHWGAPPS YYGGASNTGGPPAQNSYREM
Sbjct: 361 --------PPPPYNSGAPPPPPYNSGEPQPNNHWGAPPSTYYGGASNTGGPPAQNSYREM 420

Query: 421 QPNAGGWSRNVHNNQRE 426
           QPNAGGWS NVHNNQRE
Sbjct: 421 QPNAGGWSSNVHNNQRE 424

[Close]

BLAST of Cp4.1LG01g01460 vs. NCBI nr
Match: XP_022981149.1 (multiple organellar RNA editing factor 8, chloroplastic/mitochondrial [Cucurbita maxima])

HSP 1 Score: 738 bits (1905), Expect = 6.22e-267
Identity = 395/429 (92.07%), Postives = 401/429 (93.47%), Query Frame = 0


Query: 1   MATRLLYRSLPKTLISASIFSRSFLTATGTALSASSHSSAFLLRRLRPLAAIVVADFRGL 60
           MATRL YR+LPKTLISASIFSRSFLTATGTALS+SSHSS  LLRRLRPLAAIVVADFRGL
Sbjct: 1   MATRLFYRTLPKTLISASIFSRSFLTATGTALSSSSHSSTSLLRRLRPLAAIVVADFRGL 60

Query: 61  SPAASASAREFATSTTSSSLKDPNPNWSNRPPKETILLDGCDFEHWLIVMEKPEGDPTRD 120
           SPAASA  REFATSTTSSSLKDPN NWSNRPPKETILLDGCDFEHWLIVMEKPEGDPTRD
Sbjct: 61  SPAASA--REFATSTTSSSLKDPNLNWSNRPPKETILLDGCDFEHWLIVMEKPEGDPTRD 120

Query: 121 EIIDSYIKTLAMVVGSEEEARMKIYSVSTRCYYAFGCLVSEELSYKIKELPKVRWVLPDS 180
           EIIDS+IKTLAMVVGSEEEARMKIYSVSTRCYYAFGCLVSEELSYKIKELPKVRWVLPDS
Sbjct: 121 EIIDSFIKTLAMVVGSEEEARMKIYSVSTRCYYAFGCLVSEELSYKIKELPKVRWVLPDS 180

Query: 181 YLDVKNKDYGGEPFINGQAVPYDPKYHEEWVRNNARANERNRRNSDGSRNFNRREHTRNR 240
           YLDVKNKDYGGEPFINGQAVPYDPKYHEEWVRNNARANERNRRNSDGSRNFNRREHTRNR
Sbjct: 181 YLDVKNKDYGGEPFINGQAVPYDPKYHEEWVRNNARANERNRRNSDGSRNFNRREHTRNR 240

Query: 241 EFPNASPTSGTAPSNMPPRNHDGLPQGNYSRPPPPPP-NTFSRPPPPPPPPSSNFSGPPP 300
           EFPNAS TSG APSNMPPRNHDG+PQGNYSRPPPPPP NTF+RPPPP     SNFSGPPP
Sbjct: 241 EFPNASATSGPAPSNMPPRNHDGMPQGNYSRPPPPPPPNTFNRPPPP-----SNFSGPPP 300

Query: 301 PRPNNFSGPPPPP--NNFSRPPPPPQNNFSGPPPPRPPQNNFSVPPPHNYAPPPPYNSGA 360
           PRPNNFSGPPPPP  N+FSRPPPPPQNNFSGPPPP PPQNNF VPPPHNYA         
Sbjct: 301 PRPNNFSGPPPPPPPNDFSRPPPPPQNNFSGPPPP-PPQNNFRVPPPHNYA--------- 360

Query: 361 PPPPYNSGAPPPPPYNSGEPQPNNHWGAPPSNYYGGASNTGGPPAQNSYREMQPNAGGWS 420
           PPPPYNSGAPPPPPYNSGEPQPNNHWGAPPSNYYGGASNTGGPPAQNSYREMQPNAGGWS
Sbjct: 361 PPPPYNSGAPPPPPYNSGEPQPNNHWGAPPSNYYGGASNTGGPPAQNSYREMQPNAGGWS 412

Query: 421 RNVHNNQRE 426
            NVHNNQRE
Sbjct: 421 SNVHNNQRE 412

[Close]

BLAST of Cp4.1LG01g01460 vs. ExPASy TrEMBL
Match: A0A6J1FMC0 (multiple organellar RNA editing factor 8, chloroplastic/mitochondrial isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111447113 PE=4 SV=1)

HSP 1 Score: 773 bits (1995), Expect = 6.06e-281
Identity = 407/426 (95.54%), Postives = 411/426 (96.48%), Query Frame = 0


Query: 1   MATRLLYRSLPKTLISASIFSRSFLTATGTALSASSHSSAFLLRRLRPLAAIVVADFRGL 60
           MATRL YRSLPKTLISASIFSRSFLTATGTALSASSHSSA+LLRRLRPLAAIVVADFRGL
Sbjct: 1   MATRLFYRSLPKTLISASIFSRSFLTATGTALSASSHSSAYLLRRLRPLAAIVVADFRGL 60

Query: 61  SPAASASAREFATSTTSSSLKDPNPNWSNRPPKETILLDGCDFEHWLIVMEKPEGDPTRD 120
           SPAASA  REFATST SSSLKDPNPNWSNRPPKETILLDGCDFEHWLIVMEKPEGDPTRD
Sbjct: 61  SPAASA--REFATSTASSSLKDPNPNWSNRPPKETILLDGCDFEHWLIVMEKPEGDPTRD 120

Query: 121 EIIDSYIKTLAMVVGSEEEARMKIYSVSTRCYYAFGCLVSEELSYKIKELPKVRWVLPDS 180
           EIIDS+IKTLAMVVGSEEEARMKIYSVSTRCYYAFGCLVSEELSYKIKELPKVRWVLPDS
Sbjct: 121 EIIDSFIKTLAMVVGSEEEARMKIYSVSTRCYYAFGCLVSEELSYKIKELPKVRWVLPDS 180

Query: 181 YLDVKNKDYGGEPFINGQAVPYDPKYHEEWVRNNARANERNRRNSDGSRNFNRREHTRNR 240
           YLDVKNKDYGGEPFINGQAVPYDPKYHEEWVRNNARANERNRRNSDGSRNFNRREHTRNR
Sbjct: 181 YLDVKNKDYGGEPFINGQAVPYDPKYHEEWVRNNARANERNRRNSDGSRNFNRREHTRNR 240

Query: 241 EFPNASPTSGTAPSNMPPRNHDGLPQGNYSRPPPPPPNTFSRPPPPPPPPSSNFSGPPPP 300
           EFPNASPTSGTAPSNMPPRNHDG+PQGNYSRPPPPPPNTFSRPPPPPPPPS +FSGPPPP
Sbjct: 241 EFPNASPTSGTAPSNMPPRNHDGMPQGNYSRPPPPPPNTFSRPPPPPPPPS-HFSGPPPP 300

Query: 301 RPNNFSGPPPPPNNFSRPPPPPQNNFSGPPPPRPPQNNFSVPPPHNYAPPPPYNSGAPPP 360
           RPNNFSGPPPPPNNFSRPPPPPQNNFSGPPPP PPQNNFSVPPPHNYA         PPP
Sbjct: 301 RPNNFSGPPPPPNNFSRPPPPPQNNFSGPPPP-PPQNNFSVPPPHNYA---------PPP 360

Query: 361 PYNSGAPPPPPYNSGEPQPNNHWGAPPSNYYGGASNTGGPPAQNSYREMQPNAGGWSRNV 420
           PYNSGAPPPPPYNSGEPQPNNHWGAPPSNYYGGASNTGGPPAQNSYREMQPNAGGWSRNV
Sbjct: 361 PYNSGAPPPPPYNSGEPQPNNHWGAPPSNYYGGASNTGGPPAQNSYREMQPNAGGWSRNV 413

Query: 421 HNNQRE 426
           HNNQRE
Sbjct: 421 HNNQRE 413

[Close]

BLAST of Cp4.1LG01g01460 vs. ExPASy TrEMBL
Match: A0A6J1FV23 (multiple organellar RNA editing factor 8, chloroplastic/mitochondrial isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111447113 PE=4 SV=1)

HSP 1 Score: 760 bits (1962), Expect = 1.48e-275
Identity = 407/448 (90.85%), Postives = 411/448 (91.74%), Query Frame = 0


Query: 1   MATRLLYRSLPKTLISASIFSRSFLTATGTALSASSHSSAFLLRRLRPLAAIVVADFRGL 60
           MATRL YRSLPKTLISASIFSRSFLTATGTALSASSHSSA+LLRRLRPLAAIVVADFRGL
Sbjct: 1   MATRLFYRSLPKTLISASIFSRSFLTATGTALSASSHSSAYLLRRLRPLAAIVVADFRGL 60

Query: 61  SPAASASAREFATSTTSSSLKDPNPNWSNRPPKETILLDGCDFEHWLIVMEKPEGDPTRD 120
           SPAASA  REFATST SSSLKDPNPNWSNRPPKETILLDGCDFEHWLIVMEKPEGDPTRD
Sbjct: 61  SPAASA--REFATSTASSSLKDPNPNWSNRPPKETILLDGCDFEHWLIVMEKPEGDPTRD 120

Query: 121 EIIDSYIKTLAMVVGSEEEARMKIYSVSTRCYYAFGCLVSEELSYKIKELPKVRWVLPDS 180
           EIIDS+IKTLAMVVGSEEEARMKIYSVSTRCYYAFGCLVSEELSYKIKELPKVRWVLPDS
Sbjct: 121 EIIDSFIKTLAMVVGSEEEARMKIYSVSTRCYYAFGCLVSEELSYKIKELPKVRWVLPDS 180

Query: 181 YLDVKNKDYGGEPFINGQAVPYDPKYHEEWVRNNARANERNRRNSDGSRNFNRREHTRNR 240
           YLDVKNKDYGGEPFINGQAVPYDPKYHEEWVRNNARANERNRRNSDGSRNFNRREHTRNR
Sbjct: 181 YLDVKNKDYGGEPFINGQAVPYDPKYHEEWVRNNARANERNRRNSDGSRNFNRREHTRNR 240

Query: 241 EFPNASPTSGTAPSNMPPRNHDGLPQGNYSRPPPPPPNTFSRPPPPPPPPSSNFSGPPPP 300
           EFPNASPTSGTAPSNMPPRNHDG+PQGNYSRPPPPPPNTFSRPPPPPPPPS +FSGPPPP
Sbjct: 241 EFPNASPTSGTAPSNMPPRNHDGMPQGNYSRPPPPPPNTFSRPPPPPPPPS-HFSGPPPP 300

Query: 301 RPNNFSGPPPPPNNFSRPPPP----------------------PQNNFSGPPPPRPPQNN 360
           RPNNFSGPPPPPNNFSRPPPP                      PQNNFSGPPPP PPQNN
Sbjct: 301 RPNNFSGPPPPPNNFSRPPPPNNFSRPPPPPPPNNFSRPPPPPPQNNFSGPPPP-PPQNN 360

Query: 361 FSVPPPHNYAPPPPYNSGAPPPPYNSGAPPPPPYNSGEPQPNNHWGAPPSNYYGGASNTG 420
           FSVPPPHNYA         PPPPYNSGAPPPPPYNSGEPQPNNHWGAPPSNYYGGASNTG
Sbjct: 361 FSVPPPHNYA---------PPPPYNSGAPPPPPYNSGEPQPNNHWGAPPSNYYGGASNTG 420

Query: 421 GPPAQNSYREMQPNAGGWSRNVHNNQRE 426
           GPPAQNSYREMQPNAGGWSRNVHNNQRE
Sbjct: 421 GPPAQNSYREMQPNAGGWSRNVHNNQRE 435

[Close]

BLAST of Cp4.1LG01g01460 vs. ExPASy TrEMBL
Match: A0A6J1J148 (multiple organellar RNA editing factor 8, chloroplastic/mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111480381 PE=4 SV=1)

HSP 1 Score: 738 bits (1905), Expect = 3.01e-267
Identity = 395/429 (92.07%), Postives = 401/429 (93.47%), Query Frame = 0


Query: 1   MATRLLYRSLPKTLISASIFSRSFLTATGTALSASSHSSAFLLRRLRPLAAIVVADFRGL 60
           MATRL YR+LPKTLISASIFSRSFLTATGTALS+SSHSS  LLRRLRPLAAIVVADFRGL
Sbjct: 1   MATRLFYRTLPKTLISASIFSRSFLTATGTALSSSSHSSTSLLRRLRPLAAIVVADFRGL 60

Query: 61  SPAASASAREFATSTTSSSLKDPNPNWSNRPPKETILLDGCDFEHWLIVMEKPEGDPTRD 120
           SPAASA  REFATSTTSSSLKDPN NWSNRPPKETILLDGCDFEHWLIVMEKPEGDPTRD
Sbjct: 61  SPAASA--REFATSTTSSSLKDPNLNWSNRPPKETILLDGCDFEHWLIVMEKPEGDPTRD 120

Query: 121 EIIDSYIKTLAMVVGSEEEARMKIYSVSTRCYYAFGCLVSEELSYKIKELPKVRWVLPDS 180
           EIIDS+IKTLAMVVGSEEEARMKIYSVSTRCYYAFGCLVSEELSYKIKELPKVRWVLPDS
Sbjct: 121 EIIDSFIKTLAMVVGSEEEARMKIYSVSTRCYYAFGCLVSEELSYKIKELPKVRWVLPDS 180

Query: 181 YLDVKNKDYGGEPFINGQAVPYDPKYHEEWVRNNARANERNRRNSDGSRNFNRREHTRNR 240
           YLDVKNKDYGGEPFINGQAVPYDPKYHEEWVRNNARANERNRRNSDGSRNFNRREHTRNR
Sbjct: 181 YLDVKNKDYGGEPFINGQAVPYDPKYHEEWVRNNARANERNRRNSDGSRNFNRREHTRNR 240

Query: 241 EFPNASPTSGTAPSNMPPRNHDGLPQGNYSRPPPPPP-NTFSRPPPPPPPPSSNFSGPPP 300
           EFPNAS TSG APSNMPPRNHDG+PQGNYSRPPPPPP NTF+RPPPP     SNFSGPPP
Sbjct: 241 EFPNASATSGPAPSNMPPRNHDGMPQGNYSRPPPPPPPNTFNRPPPP-----SNFSGPPP 300

Query: 301 PRPNNFSGPPPPP--NNFSRPPPPPQNNFSGPPPPRPPQNNFSVPPPHNYAPPPPYNSGA 360
           PRPNNFSGPPPPP  N+FSRPPPPPQNNFSGPPPP PPQNNF VPPPHNYA         
Sbjct: 301 PRPNNFSGPPPPPPPNDFSRPPPPPQNNFSGPPPP-PPQNNFRVPPPHNYA--------- 360

Query: 361 PPPPYNSGAPPPPPYNSGEPQPNNHWGAPPSNYYGGASNTGGPPAQNSYREMQPNAGGWS 420
           PPPPYNSGAPPPPPYNSGEPQPNNHWGAPPSNYYGGASNTGGPPAQNSYREMQPNAGGWS
Sbjct: 361 PPPPYNSGAPPPPPYNSGEPQPNNHWGAPPSNYYGGASNTGGPPAQNSYREMQPNAGGWS 412

Query: 421 RNVHNNQRE 426
            NVHNNQRE
Sbjct: 421 SNVHNNQRE 412

[Close]

BLAST of Cp4.1LG01g01460 vs. ExPASy TrEMBL
Match: A0A6J1JAJ8 (multiple organellar RNA editing factor 8, chloroplastic/mitochondrial isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111482761 PE=4 SV=1)

HSP 1 Score: 563 bits (1452), Expect = 7.91e-198
Identity = 331/454 (72.91%), Postives = 356/454 (78.41%), Query Frame = 0


Query: 1   MATRLLYRSLPKTLISASIFSRSFLTATGTALSASSHSSAFLLRRLRPLAAIVVADFRGL 60
           MAT+L  RS PKTLI  S+FSRSFLTA   A+SASS SS+ LLR LRPL AIV ADFR +
Sbjct: 1   MATQLFSRSFPKTLILTSMFSRSFLTANRAAISASSCSSSSLLRYLRPLTAIVGADFRSV 60

Query: 61  SPAASASAREFATSTTSSSLKDPNPNWSNRPPKETILLDGCDFEHWLIVMEKPEGDPTRD 120
           SPA+S   REFAT  TSSSL DPNPNWSNRPPKETILLDGCDFEHWL+VMEKPEGDPTRD
Sbjct: 61  SPASSV--REFATRATSSSLNDPNPNWSNRPPKETILLDGCDFEHWLVVMEKPEGDPTRD 120

Query: 121 EIIDSYIKTLAMVVGSEEEARMKIYSVSTRCYYAFGCLVSEELSYKIKELPKVRWVLPDS 180
           EIIDSYIKTLAMV+GSEEEARMKIYSVSTRCY+AFGCLVSEELSYKIKELPKVRWVLPDS
Sbjct: 121 EIIDSYIKTLAMVIGSEEEARMKIYSVSTRCYFAFGCLVSEELSYKIKELPKVRWVLPDS 180

Query: 181 YLDVKNKDYGGEPFINGQAVPYDPKYHEEWVRNNARANERNRRNS-----DGSRNFNRR- 240
           YLDVKNKDYGGEPFINGQAVPYDPKYHEEW+RNNARANERN+RN      D SRNF RR 
Sbjct: 181 YLDVKNKDYGGEPFINGQAVPYDPKYHEEWIRNNARANERNKRNDRPRNFDRSRNFERRR 240

Query: 241 EHTRNREFPNASPTSGT-------APSNMPPRNHD---------GLPQGNYSR-PPPPPP 300
           E+ ++REFPNASP   T       APSNMPP N +         G+PQGNY+  PPPPPP
Sbjct: 241 ENMQSREFPNASPNQPTGPNMSPPAPSNMPPNNFNAGMPPQNRGGMPQGNYAGGPPPPPP 300

Query: 301 NTFSRPPPPPPPPSSNFSGPPPPRPNNFSGPPPPPNNFSRPPPPPQNNFSGPPPPRPPQN 360
           N FS PPPPP    +NFSGPPPP PNNFSGPPPPPNNFS PPPPP N   GPPPP  P N
Sbjct: 301 NNFSGPPPPP----NNFSGPPPP-PNNFSGPPPPPNNFSGPPPPPHNYAGGPPPP--PPN 360

Query: 361 NFSVPPP---HNYAPPPPYNSGAPPPPYNSGAPPPPPYNSGEPQPNNHWGAPP-SNYYGG 420
           NF  PPP   +NYA  PP N   PPPP++  APP   +N G PQPNN+WG PP +N YGG
Sbjct: 361 NFGGPPPPPLNNYAGQPPRNYAPPPPPHSGAAPP---HNYGGPQPNNYWGGPPPTNNYGG 420

Query: 421 ASNTGGPPAQNSYREM-QPNAGGWSRNVHNNQRE 426
            SN+GGPP QNSY    QPNAGGWS NVHN Q E
Sbjct: 421 PSNSGGPPPQNSYGGGGQPNAGGWSSNVHNKQHE 442

[Close]

BLAST of Cp4.1LG01g01460 vs. ExPASy TrEMBL
Match: A0A6J1EA12 (multiple organellar RNA editing factor 8, chloroplastic/mitochondrial isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111430715 PE=4 SV=1)

HSP 1 Score: 535 bits (1378), Expect = 5.50e-187
Identity = 312/450 (69.33%), Postives = 339/450 (75.33%), Query Frame = 0


Query: 1   MATRLLYRSLPKTLISASIFSRSFLTATGTALSASSHSSAFLLRRLRPLAAIVVADFRGL 60
           MAT+L  RSLPKTLI  S+FSRSFLTA   A+SASS SS+ LLR LRPL AIV ADFR +
Sbjct: 1   MATQLFSRSLPKTLILTSMFSRSFLTANRAAISASSCSSSSLLRYLRPLTAIVGADFRSV 60

Query: 61  SPAASASAREFATSTTSSSLKDPNPNWSNRPPKETILLDGCDFEHWLIVMEKPEGDPTRD 120
           SPA S   REFAT  TSSSL DPNPNWSNRPPKETILLDGCDFEHWL+VMEKPEGDPTRD
Sbjct: 61  SPAPSV--REFATRATSSSLNDPNPNWSNRPPKETILLDGCDFEHWLVVMEKPEGDPTRD 120

Query: 121 EIIDSYIKTLAMVVGSEEEARMKIYSVSTRCYYAFGCLVSEELSYKIKELPKVRWVLPDS 180
           EIIDSYIKTLAMV+GSEEEARMKIYSVSTRCY+AFGCLVSEELSYKIKELPKVRWVLPDS
Sbjct: 121 EIIDSYIKTLAMVIGSEEEARMKIYSVSTRCYFAFGCLVSEELSYKIKELPKVRWVLPDS 180

Query: 181 YLDVKNKDYGGEPFINGQAVPYDPKYHEEWVRNNARANERNRRNS-----DGSRNFNRR- 240
           YLDVKNKDYGGEPFINGQAVPYDPKYHEEW+RNNARANERN+RN      D SRNF RR 
Sbjct: 181 YLDVKNKDYGGEPFINGQAVPYDPKYHEEWIRNNARANERNKRNDRPRNFDRSRNFERRR 240

Query: 241 EHTRNREFPNASPTSGT-------APSNMPPRNHD---------GLPQGNYSRPPPPPPN 300
           E+ ++REFPNASP   T       APSNMPP N +         G+PQGNY+        
Sbjct: 241 ENMQSREFPNASPNQPTGPNMSPPAPSNMPPNNFNAGMSPQNRGGMPQGNYA-------- 300

Query: 301 TFSRPPPPPPPPSSNFSGPPPPRPNNFSGPPPPPNNFSR-PPPPPQNNFSGPPPPRPPQN 360
                            GPPPP PNNFSGPPPPP+N++  PPPPP NNF GPPPP  P N
Sbjct: 301 ----------------GGPPPPPPNNFSGPPPPPHNYAGGPPPPPPNNFGGPPPP--PLN 360

Query: 361 NFSVPPPHNYAPPPPYNSGAPPPPYNSGAPPPPPYNSGEPQPNNHWGAPPSNYYGGASNT 420
           N++  PP NYAPPPP     PPPP +SG  P PP+N G PQPNN+WG PP N YGG S++
Sbjct: 361 NYAGQPPRNYAPPPP----PPPPPPHSG--PAPPHNYGGPQPNNYWGGPPPNNYGGPSHS 416

Query: 421 GGPPAQNSYREM-QPNAGGWSRNVHNNQRE 426
           GGPP QN+Y    QPN GGWS NVHN Q E
Sbjct: 421 GGPPPQNNYGGGGQPNVGGWSSNVHNKQHE 416

[Close]

BLAST of Cp4.1LG01g01460 vs. TAIR 10
Match: AT3G15000.1 (cobalt ion binding )

HSP 1 Score: 328.6 bits (841), Expect = 7.6e-90
Identity = 234/430 (54.42%), Postives = 265/430 (61.63%), Query Frame = 0


Query: 1   MATRLLYRSL---PKTLISASIFSRSFLTATGTALSASSHSSAFLLRRLRPLAAIVVADF 60
           MAT  + RS+   P   +S  +F+RSF ++   A S +S     LL R RPL A   + F
Sbjct: 1   MATHTISRSILCRPAKSLS-FLFTRSFASSAPLAKSPASS----LLSRSRPLVAAFSSVF 60

Query: 61  RGLSPAASASAREFATSTTSSSLKDPNPNWSNRPPKETILLDGCDFEHWLIVMEKPEGDP 120
           RG       S +  +T  TSSSL DPNPNWSNRPPKETILLDGCDFEHWL+V+E P+G+P
Sbjct: 61  RG----GLVSVKGLSTQATSSSLNDPNPNWSNRPPKETILLDGCDFEHWLVVVEPPQGEP 120

Query: 121 TRDEIIDSYIKTLAMVVGSEEEARMKIYSVSTRCYYAFGCLVSEELSYKIKELPKVRWVL 180
           TRDEIIDSYIKTLA +VGSE+EARMKIYSVSTRCYYAFG LVSE+LS+K+KEL  VRWVL
Sbjct: 121 TRDEIIDSYIKTLAQIVGSEDEARMKIYSVSTRCYYAFGALVSEDLSHKLKELSNVRWVL 180

Query: 181 PDSYLDVKNKDYGGEPFINGQAVPYDPKYHEEWVRNNARANERNR-----RNSDGSRNFN 240
           PDSYLDV+NKDYGGEPFI+G+AVPYDPKYHEEW+RNNARANERNR     RN+D SRNF 
Sbjct: 181 PDSYLDVRNKDYGGEPFIDGKAVPYDPKYHEEWIRNNARANERNRRNDRPRNNDRSRNFE 240

Query: 241 RREHTRNREFPNASPTSGTAPSNMPPRNHDGLPQGNYSRPPPPPPNTFSRPPPPPPPPSS 300
           RR              +G  P   PP              PPPPP+        PPPP  
Sbjct: 241 RRREN----------MAGGPPPQRPPMG-----------GPPPPPHIGG---SAPPPPHM 300

Query: 301 NFSGPPPPRPNNFSGPPPPPN--NFSRPPP---PPQNNFSGPPPPRPPQNNFSVPPPHNY 360
             S PPPP      GPPPP N      PPP   PPQNN  G   PRPPQN    PPP+  
Sbjct: 301 GGSAPPPPHMGQNYGPPPPNNMGGPRHPPPYGAPPQNNMGG---PRPPQNYGGTPPPNYG 360

Query: 361 APPPPYNSGAPPPPYNSGAPPPPPYNSGEPQPNNHWGAPP--SNYYGGASNTGGPPAQNS 416
             PP  N G  PPP N G  PPP Y  G   P  + GAPP  +NY    S    P  QN+
Sbjct: 361 GAPPANNMGGAPPP-NYGGGPPPQY--GAVPPPQYGGAPPQNNNYQQQGSGMQQPQYQNN 388

[Close]

BLAST of Cp4.1LG01g01460 vs. TAIR 10
Match: AT3G06790.2 (plastid developmental protein DAG, putative )

HSP 1 Score: 177.2 bits (448), Expect = 2.8e-44
Identity = 116/251 (46.22%), Postives = 143/251 (56.97%), Query Frame = 0


Query: 4   RLLYRSLPKTLISASIFSRSFLTATGTALSASSHSSAFLLRRLRPLAAIVVADFRGLSPA 63
           R L   L KTL S++ +S SF T     LS+ S       R   PL   V +    L P 
Sbjct: 8   RTLSTLLNKTLSSSTSYSSSFPT-----LSSRS-------RFAMPLIEKVSSSRTSLGP- 67

Query: 64  ASASAREFATSTTSSSLKDPNPNWSNRPPKETILLDGCDFEHWLIVMEKPEGDPTRDEII 123
              S R   + +  S L DP+PNWSNRPPKETILLDGCD+EHWLIVME  +  PT +E+I
Sbjct: 68  CYISTRPKTSGSGYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVMEFTDPKPTEEEMI 127

Query: 124 DSYIKTLAMVVGSEEEARMKIYSVSTRCYYAFGCLVSEELSYKIKELPKVRWVLPDSYLD 183
           +SY+KTL  V+G EEEA+ KIYSV T  Y  FG L+SEELS K+K LP V WVLPDSYLD
Sbjct: 128 NSYVKTLTSVLGCEEEAKKKIYSVCTSTYTGFGALISEELSCKVKALPGVLWVLPDSYLD 187

Query: 184 VKNKDYGGEPFINGQAVPYDPKYHEEWVRNNARANERNRRNSDGSRNFNRREHTRNREFP 243
           V NKDYGG+ ++ G+ +P       E      R   R  R  + +    RRE +     P
Sbjct: 188 VPNKDYGGDLYVEGKVIPRPQYRFTEQRHTRPRPRPRYDRRRE-TMQVERREPSMGLHSP 243

Query: 244 NASPTSGTAPS 255
             +P     PS
Sbjct: 248 -VNPGEFNKPS 243

[Close]

BLAST of Cp4.1LG01g01460 vs. TAIR 10
Match: AT3G06790.1 (plastid developmental protein DAG, putative )

HSP 1 Score: 175.3 bits (443), Expect = 1.1e-43
Identity = 115/251 (45.82%), Postives = 143/251 (56.97%), Query Frame = 0


Query: 4   RLLYRSLPKTLISASIFSRSFLTATGTALSASSHSSAFLLRRLRPLAAIVVADFRGLSPA 63
           R L   L KTL S++ +S SF T     LS+ S       R   PL   V +    L P 
Sbjct: 8   RTLSTLLNKTLSSSTSYSSSFPT-----LSSRS-------RFAMPLIEKVSSSRTSLGP- 67

Query: 64  ASASAREFATSTTSSSLKDPNPNWSNRPPKETILLDGCDFEHWLIVMEKPEGDPTRDEII 123
              S R   + +  S L DP+PNWSNRPPKETILLDGCD+EHWLIVME  +  PT +E+I
Sbjct: 68  CYISTRPKTSGSGYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVMEFTDPKPTEEEMI 127

Query: 124 DSYIKTLAMVVGSEEEARMKIYSVSTRCYYAFGCLVSEELSYKIKELPKVRWVLPDSYLD 183
           +SY+KTL  V+G +EEA+ KIYSV T  Y  FG L+SEELS K+K LP V WVLPDSYLD
Sbjct: 128 NSYVKTLTSVLGWQEEAKKKIYSVCTSTYTGFGALISEELSCKVKALPGVLWVLPDSYLD 187

Query: 184 VKNKDYGGEPFINGQAVPYDPKYHEEWVRNNARANERNRRNSDGSRNFNRREHTRNREFP 243
           V NKDYGG+ ++ G+ +P       E      R   R  R  + +    RRE +     P
Sbjct: 188 VPNKDYGGDLYVEGKVIPRPQYRFTEQRHTRPRPRPRYDRRRE-TMQVERREPSMGLHSP 243

Query: 244 NASPTSGTAPS 255
             +P     PS
Sbjct: 248 -VNPGEFNKPS 243

[Close]

BLAST of Cp4.1LG01g01460 vs. TAIR 10
Match: AT1G53260.1 (LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: cobalt ion binding (TAIR:AT3G15000.1); Has 32763 Blast hits to 18534 proteins in 929 species: Archae - 22; Bacteria - 2420; Metazoa - 15140; Fungi - 5401; Plants - 5313; Viruses - 485; Other Eukaryotes - 3982 (source: NCBI BLink). )

HSP 1 Score: 164.9 bits (416), Expect = 1.5e-40
Identity = 144/296 (48.65%), Postives = 167/296 (56.42%), Query Frame = 0


Query: 142 MKIYSVSTRCYYAFGCLVSEELSYKIKELPKVRWVLPDSYLDVKNKDYGGEPFINGQAVP 201
           MKIYSVS +CY+AFG LVSE+LS+KIKELPKV+WVLPDSYLD KNKDYGGEPFI+G+AVP
Sbjct: 1   MKIYSVSHKCYFAFGALVSEDLSHKIKELPKVKWVLPDSYLDGKNKDYGGEPFIDGKAVP 60

Query: 202 YDPKYHEEWVRNNARANERNR-----RNSDGSRNFNRREHTRNREFPNASPTSGTAPSNM 261
           YDPKYHEEW+RNNA A   NR     RNSDG RN    + T  R  P  +   G AP   
Sbjct: 61  YDPKYHEEWIRNNANATNENRRPRRPRNSDGGRNDRGNQDTGYRR-PPPNQGMGGAP--- 120

Query: 262 PPRNHDGLPQGNYSRPP---PPPPNTFSRPPPPPPPPSSNFSGPPPPRPN-NFSGPPPP- 321
           PP  H G    N + PP   PP  N   R PPPPP  + N+ GPP P  N N+ GPPP  
Sbjct: 121 PPPPHIG---NNPNMPPHIQPPNMNQNYRGPPPPPNMNQNYQGPPAPNMNQNYQGPPPSN 180

Query: 322 -PNNFSRPPPPPQN-NFSGPPPPRPPQNNFSVPPPHNYAPPPPYNSGAPPPPYNSGAPPP 381
              N+  PPPP  N ++ GPPPP   Q         +Y  PPP N G      N   P  
Sbjct: 181 MGQNYQGPPPPNMNQSYQGPPPPNMNQ---------SYQGPPPSNMG-----QNYRGPSL 240

Query: 382 PPYNSGEPQPNNHWGAPPSNYYGGASNTGGPPAQNSYREMQPNAGGWSRNVHNNQR 426
           PP N  +    N+ G PP N  GG S   G   QN   + Q   GG  +  +   R
Sbjct: 241 PPPNMSQ----NYEGPPPPNMNGGWS---GNYQQNGGYQQQGQGGGMQQQPYPPNR 268

[Close]

BLAST of Cp4.1LG01g01460 vs. TAIR 10
Match: AT1G72530.1 (plastid developmental protein DAG, putative )

HSP 1 Score: 163.3 bits (412), Expect = 4.3e-40
Identity = 86/197 (43.65%), Postives = 123/197 (62.44%), Query Frame = 0


Query: 47  RPLAAIVVADFRGLSPAASASAREFATSTTSSSLKDPNPNWSN--RPPKETILLDGCDFE 106
           RPL       FR LSP +  S         S S+     +WS   R P    L++GCD++
Sbjct: 7   RPLNLTAAVRFR-LSPLSPFSG-------NSGSINSETTSWSELIRVPS---LVEGCDYK 66

Query: 107 HWLIVMEKPEGDPTRDEIIDSYIKTLAMVVGSEEEARMKIYSVSTRCYYAFGCLVSEELS 166
           HWL++M+ P G PTR+ I+ S+++TLAM +GSEEEA+  IYSVST+ YYAFGC + E L+
Sbjct: 67  HWLVLMKPPNGYPTRNHIVQSFVETLAMALGSEEEAKRSIYSVSTKYYYAFGCRIHEPLT 126

Query: 167 YKIKELPKVRWVLPDSYLDVKNKDYGGEPFINGQAVPYDPKYHEEWVRNNARANERNRRN 226
           YKI+ LP V+WVLPDS++   +  YGGEPF++G+ VPYD KYH +W+        R++ +
Sbjct: 127 YKIRSLPDVKWVLPDSFIVDGDNRYGGEPFVDGEVVPYDEKYHADWL--------RDQTD 184

Query: 227 SDGSRNFNRREHTRNRE 242
            D      +++H R R+
Sbjct: 187 EDAKSGVVKKKHRRKRK 184

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g01460 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LKA5	1.1e-88	54.42	Multiple organellar RNA editing factor 8, chloroplastic/mitochondrial OS=Arabido...	[more]
Q84JZ6	4.0e-43	46.22	Multiple organellar RNA editing factor 3, mitochondrial OS=Arabidopsis thaliana ...	[more]
Q9CAH0	6.0e-39	43.65	Multiple organellar RNA editing factor 7, mitochondrial OS=Arabidopsis thaliana ...	[more]
O22793	2.6e-34	52.26	Multiple organellar RNA editing factor 2, chloroplastic OS=Arabidopsis thaliana ...	[more]
O82169	4.4e-34	40.89	Multiple organellar RNA editing factor 6, mitochondrial OS=Arabidopsis thaliana ...	[more]

BLAST of Cp4.1LG01g01460 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023514966.1	5.47e-301	100.00	multiple organellar RNA editing factor 8, chloroplastic/mitochondrial [Cucurbita...	[more]
XP_022941886.1	1.25e-280	95.54	multiple organellar RNA editing factor 8, chloroplastic/mitochondrial isoform X2...	[more]
XP_022941885.1	3.05e-275	90.85	multiple organellar RNA editing factor 8, chloroplastic/mitochondrial isoform X1...	[more]
KAG7031062.1	6.74e-274	92.45	Multiple organellar RNA editing factor 8, chloroplastic/mitochondrial, partial [...	[more]
XP_022981149.1	6.22e-267	92.07	multiple organellar RNA editing factor 8, chloroplastic/mitochondrial [Cucurbita...	[more]

BLAST of Cp4.1LG01g01460 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FMC0	6.06e-281	95.54	multiple organellar RNA editing factor 8, chloroplastic/mitochondrial isoform X2...	[more]
A0A6J1FV23	1.48e-275	90.85	multiple organellar RNA editing factor 8, chloroplastic/mitochondrial isoform X1...	[more]
A0A6J1J148	3.01e-267	92.07	multiple organellar RNA editing factor 8, chloroplastic/mitochondrial OS=Cucurbi...	[more]
A0A6J1JAJ8	7.91e-198	72.91	multiple organellar RNA editing factor 8, chloroplastic/mitochondrial isoform X1...	[more]
A0A6J1EA12	5.50e-187	69.33	multiple organellar RNA editing factor 8, chloroplastic/mitochondrial isoform X1...	[more]

BLAST of Cp4.1LG01g01460 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G15000.1	7.6e-90	54.42	cobalt ion binding	[more]
AT3G06790.2	2.8e-44	46.22	plastid developmental protein DAG, putative	[more]
AT3G06790.1	1.1e-43	45.82	plastid developmental protein DAG, putative	[more]
AT1G53260.1	1.5e-40	48.65	LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: cob...	[more]
AT1G72530.1	4.3e-40	43.65	plastid developmental protein DAG, putative	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 217..426
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 268..376
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 377..426
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 217..241
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 242..256
None	No IPR available	PANTHER	PTHR31346:SF25	MULTIPLE ORGANELLAR RNA EDITING FACTOR 8, CHLOROPLASTIC/MITOCHONDRIAL-LIKE	coord: 1..386
IPR039206	MORF/ORRM1/DAG-like	PANTHER	PTHR31346	MULTIPLE ORGANELLAR RNA EDITING FACTOR 2, CHLOROPLASTIC-RELATED-RELATED	coord: 1..386

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g01460.1	Cp4.1LG01g01460.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016554	cytidine to uridine editing
biological_process	GO:0006397	mRNA processing