Cp4.1LG01g01270 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG01g01270
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Protein MODIFYING WALL LIGNIN-1
Location	Cp4.1LG01: 3101308 .. 3102395 (+)
RNA-Seq Expression	Cp4.1LG01g01270
Synteny	Cp4.1LG01g01270

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAAAACGCCGTTTCGTCTACGCCTTAAGCCTCTCGATCGTCGTCTCCTTCGCACTTGTCGCCATTGTGTCGTGTATAGCTGCAGAATTACACAGAACAAAGGTATAGAATTCATCGCACAAGTGTATTTGTTCATTAAGAATTTGGTTTTTGGCTAACTTTTCCCTCTTTTTTTGTAGACCAAAGACCTCAGATTGGATGGGAAACTGTGCTATTTGCCAGAAAGTCAAGCATTTAGATATGGAGTTGCAGCATTGGCGTGTTTGGTTATTGCTCAAGTTATTGGAAATGTTTTGTTCTGCACAAGTTGCAGTTTGAACTCAAGAGGGAAGAAAAGCAATGATCAACAACCTCCTAGAAGATCAATTTTGGCCATAATTCTTCTTGTTATTTCTTGGTAGGTTTGGTTCATTTCTCTTGTTTTAACTGTTTGACCAGCCTTACAAAAGTCGTTCAAATCACCAATCAAGAGTCATAAATCTTCAATTTCAAGAACTCATCATCTAGTCTCATTCATGTTTATGTTCAATTTCTTGAGAATTTGCTAATAATTCATTCTTCTGATTCAGAATCTTCAAAGAAATTTGTAAGAATTTGCTAATAGTTGATTATTCATGAAACGAAATAATCAATTCAAATCGGAAATGAAATTCAAGAGGAGATTTGATGTTCTAGGGCAAGCTTTACCGTGGTGATATTGCTACTGAGCGCGGCGACGAGTATGAGCAGACAGCAACAATACGGTGCGGGCTGGTTGAGCGGCGAGTGTTATTTGGTGAAGAGCGGCGTATACATCGCCGCAGCAATTCTGATCCTCGTTTCGACATGTTCGATCGTCTGCTCCGCCGTAGCAGTCTTGAGGAAGAGCCTTCAGATCGACGAATCCAGAAAAACTAGTACACTGCCAAAATAATAAAAAGAAAGAAAAGCGTCGCAACGGGAACGGCAACGGCGGCGATCGGAAGAAGGCGGCGAAGCGCCATTGACGAGAGCTCCACGGATGCCATGTGTCCTGTGGATGGCGCTTTCACTGGAAGAAGGGCCTCTTGGATCTCCAGCTAACAGCCTTATTTTTTATAATTGTA

mRNA sequence

ATGGAAAAACGCCGTTTCGTCTACGCCTTAAGCCTCTCGATCGTCGTCTCCTTCGCACTTGTCGCCATTGTGTCGTGTATAGCTGCAGAATTACACAGAACAAAGACCAAAGACCTCAGATTGGATGGGAAACTGTGCTATTTGCCAGAAAGTCAAGCATTTAGATATGGAGTTGCAGCATTGGCGTGTTTGGTTATTGCTCAAGTTATTGGAAATGTTTTGTTCTGCACAAGTTGCAGTTTGAACTCAAGAGGGAAGAAAAGCAATGATCAACAACCTCCTAGAAGATCAATTTTGGCCATAATTCTTCTTGTTATTTCTTGGGCAAGCTTTACCGTGGTGATATTGCTACTGAGCGCGGCGACGAGTATGAGCAGACAGCAACAATACGGTGCGGGCTGGTTGAGCGGCGAGTGTTATTTGGTGAAGAGCGGCGTATACATCGCCGCAGCAATTCTGATCCTCGTTTCGACATGTTCGATCGTCTGCTCCGCCGTAGCAGTCTTGAGGAAGAGCCTTCAGATCGACGAATCCAGAAAAACTAGTACACTGCCAAAATAATAAAAAGAAAGAAAAGCGTCGCAACGGGAACGGCAACGGCGGCGATCGGAAGAAGGCGGCGAAGCGCCATTGACGAGAGCTCCACGGATGCCATGTGTCCTGTGGATGGCGCTTTCACTGGAAGAAGGGCCTCTTGGATCTCCAGCTAACAGCCTTATTTTTTATAATTGTA

Coding sequence (CDS)

ATGGAAAAACGCCGTTTCGTCTACGCCTTAAGCCTCTCGATCGTCGTCTCCTTCGCACTTGTCGCCATTGTGTCGTGTATAGCTGCAGAATTACACAGAACAAAGACCAAAGACCTCAGATTGGATGGGAAACTGTGCTATTTGCCAGAAAGTCAAGCATTTAGATATGGAGTTGCAGCATTGGCGTGTTTGGTTATTGCTCAAGTTATTGGAAATGTTTTGTTCTGCACAAGTTGCAGTTTGAACTCAAGAGGGAAGAAAAGCAATGATCAACAACCTCCTAGAAGATCAATTTTGGCCATAATTCTTCTTGTTATTTCTTGGGCAAGCTTTACCGTGGTGATATTGCTACTGAGCGCGGCGACGAGTATGAGCAGACAGCAACAATACGGTGCGGGCTGGTTGAGCGGCGAGTGTTATTTGGTGAAGAGCGGCGTATACATCGCCGCAGCAATTCTGATCCTCGTTTCGACATGTTCGATCGTCTGCTCCGCCGTAGCAGTCTTGAGGAAGAGCCTTCAGATCGACGAATCCAGAAAAACTAGTACACTGCCAAAATAA

Protein sequence

MEKRRFVYALSLSIVVSFALVAIVSCIAAELHRTKTKDLRLDGKLCYLPESQAFRYGVAALACLVIAQVIGNVLFCTSCSLNSRGKKSNDQQPPRRSILAIILLVISWASFTVVILLLSAATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTCSIVCSAVAVLRKSLQIDESRKTSTLPK

Homology

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BLAST of Cp4.1LG01g01270 vs. ExPASy Swiss-Prot
Match: A2RVU1 (Protein MODIFYING WALL LIGNIN-1 OS=Arabidopsis thaliana OX=3702 GN=MWL1 PE=1 SV=2)

HSP 1 Score: 122.5 bits (306), Expect = 5.1e-27
Identity = 70/176 (39.77%), Postives = 103/176 (58.52%), Query Frame = 0


Query: 18  FALVAIVSCIAAELHRTKT----------KDLRLDGKLCYLPESQAFRYGVAALACLVIA 77
           F L A   C++AE  + K           KDL+ DG+ CYLPE++AF  G+AAL C+ +A
Sbjct: 6   FGLAAFFLCLSAEFQKAKALLRAQVFLKGKDLKWDGESCYLPENRAFGLGIAALVCVSVA 65

Query: 78  QVIGNVLFCTSCSLNSRGKKSNDQQPPRRSILAIILLVISWASFTVVILLLSAATSMSRQ 137
           Q++GNV+ C       RG    D+   R +I  IILL+ SW +F V + L+S   SM+R+
Sbjct: 66  QIVGNVVIC-------RGFTKTDK--TRTTIFCIILLLFSWVNFAVAVTLISVGASMNRE 125

Query: 138 QQYGAGWLSGECYLVKSGVYIAAAILILVSTCSIVCSAVAVLRKSLQIDESRKTST 184
           Q YG GWL+ ECYLVK GV+ A+  L + +  +I+ +    ++ SLQ++   K  T
Sbjct: 126 QIYGKGWLNRECYLVKDGVFAASGFLSVTTMAAILGAFAFKVKPSLQVENHDKRHT 172

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BLAST of Cp4.1LG01g01270 vs. ExPASy Swiss-Prot
Match: O65708 (Protein MODIFYING WALL LIGNIN-2 OS=Arabidopsis thaliana OX=3702 GN=MWL2 PE=2 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 6.9e-24
Identity = 65/163 (39.88%), Postives = 97/163 (59.51%), Query Frame = 0


Query: 13  SIVVSFALVAIVSCIAAELHRTKTKDLRLD-GKLCYLPESQAFRYGVAALACLVIAQVIG 72
           S+V S  LV+ ++C AAE  RT+ +D+R D  + CY+P S AF  G AA+ C  +AQ++G
Sbjct: 8   SVVFSLGLVSFITCFAAEFKRTQKEDIRWDTERNCYVPGSHAFGLGSAAVLCFCLAQIVG 67

Query: 73  NVLFCTSCSLNSRGKKSNDQQPPRRSILAIILLVISWASFTVVILLLSAATSMSRQQQYG 132
           N++   +   +    K  D        L  +LL++SW++F VV+L+LS A SMSR Q YG
Sbjct: 68  NIVVFRN---HRTRTKREDGYKITDLTLPTVLLLLSWSNFVVVVLILSTAISMSRAQAYG 127

Query: 133 AGWLSGECYLVKSGVYIAAAILILVSTCSIVCSAVAVLRKSLQ 175
            GWL  +CYLVK GV+ A+  L ++   ++  SA  +  K  Q
Sbjct: 128 EGWLDEDCYLVKDGVFAASGCLAILGLGALTISATRIKVKKQQ 167

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BLAST of Cp4.1LG01g01270 vs. NCBI nr
Match: XP_023543619.1 (uncharacterized protein LOC111803449 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 340 bits (871), Expect = 3.86e-117
Identity = 186/186 (100.00%), Postives = 186/186 (100.00%), Query Frame = 0


Query: 1   MEKRRFVYALSLSIVVSFALVAIVSCIAAELHRTKTKDLRLDGKLCYLPESQAFRYGVAA 60
           MEKRRFVYALSLSIVVSFALVAIVSCIAAELHRTKTKDLRLDGKLCYLPESQAFRYGVAA
Sbjct: 1   MEKRRFVYALSLSIVVSFALVAIVSCIAAELHRTKTKDLRLDGKLCYLPESQAFRYGVAA 60

Query: 61  LACLVIAQVIGNVLFCTSCSLNSRGKKSNDQQPPRRSILAIILLVISWASFTVVILLLSA 120
           LACLVIAQVIGNVLFCTSCSLNSRGKKSNDQQPPRRSILAIILLVISWASFTVVILLLSA
Sbjct: 61  LACLVIAQVIGNVLFCTSCSLNSRGKKSNDQQPPRRSILAIILLVISWASFTVVILLLSA 120

Query: 121 ATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTCSIVCSAVAVLRKSLQIDESRK 180
           ATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTCSIVCSAVAVLRKSLQIDESRK
Sbjct: 121 ATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTCSIVCSAVAVLRKSLQIDESRK 180

Query: 181 TSTLPK 186
           TSTLPK
Sbjct: 181 TSTLPK 186

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BLAST of Cp4.1LG01g01270 vs. NCBI nr
Match: KAG6600430.1 (Protein MODIFYING WALL LIGNIN-1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 337 bits (864), Expect = 4.50e-116
Identity = 185/186 (99.46%), Postives = 185/186 (99.46%), Query Frame = 0


Query: 1   MEKRRFVYALSLSIVVSFALVAIVSCIAAELHRTKTKDLRLDGKLCYLPESQAFRYGVAA 60
           MEKRRFVYALSLSIVVSFALVAIVSCIAAELHRTKTKDLRLDGKLCYLPESQAFRYGVAA
Sbjct: 1   MEKRRFVYALSLSIVVSFALVAIVSCIAAELHRTKTKDLRLDGKLCYLPESQAFRYGVAA 60

Query: 61  LACLVIAQVIGNVLFCTSCSLNSRGKKSNDQQPPRRSILAIILLVISWASFTVVILLLSA 120
           LACLVIAQVIGNVLFCTSCSLNSRGKKSNDQQPPRRS LAIILLVISWASFTVVILLLSA
Sbjct: 61  LACLVIAQVIGNVLFCTSCSLNSRGKKSNDQQPPRRSNLAIILLVISWASFTVVILLLSA 120

Query: 121 ATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTCSIVCSAVAVLRKSLQIDESRK 180
           ATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTCSIVCSAVAVLRKSLQIDESRK
Sbjct: 121 ATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTCSIVCSAVAVLRKSLQIDESRK 180

Query: 181 TSTLPK 186
           TSTLPK
Sbjct: 181 TSTLPK 186

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BLAST of Cp4.1LG01g01270 vs. NCBI nr
Match: XP_022941598.1 (uncharacterized protein LOC111446907 [Cucurbita moschata])

HSP 1 Score: 336 bits (862), Expect = 9.09e-116
Identity = 185/186 (99.46%), Postives = 185/186 (99.46%), Query Frame = 0


Query: 1   MEKRRFVYALSLSIVVSFALVAIVSCIAAELHRTKTKDLRLDGKLCYLPESQAFRYGVAA 60
           MEKRRFVYALSLSIVVSFALVAIVSCIAAELHRTKTKDLRLDGKLCYLPESQAFRYGVAA
Sbjct: 1   MEKRRFVYALSLSIVVSFALVAIVSCIAAELHRTKTKDLRLDGKLCYLPESQAFRYGVAA 60

Query: 61  LACLVIAQVIGNVLFCTSCSLNSRGKKSNDQQPPRRSILAIILLVISWASFTVVILLLSA 120
           LACLVIAQVIGNVLFCTSCSLNSRGKKSNDQQ PRRSILAIILLVISWASFTVVILLLSA
Sbjct: 61  LACLVIAQVIGNVLFCTSCSLNSRGKKSNDQQRPRRSILAIILLVISWASFTVVILLLSA 120

Query: 121 ATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTCSIVCSAVAVLRKSLQIDESRK 180
           ATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTCSIVCSAVAVLRKSLQIDESRK
Sbjct: 121 ATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTCSIVCSAVAVLRKSLQIDESRK 180

Query: 181 TSTLPK 186
           TSTLPK
Sbjct: 181 TSTLPK 186

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BLAST of Cp4.1LG01g01270 vs. NCBI nr
Match: XP_022982923.1 (uncharacterized protein LOC111481621 [Cucurbita maxima])

HSP 1 Score: 331 bits (849), Expect = 8.71e-114
Identity = 182/186 (97.85%), Postives = 184/186 (98.92%), Query Frame = 0


Query: 1   MEKRRFVYALSLSIVVSFALVAIVSCIAAELHRTKTKDLRLDGKLCYLPESQAFRYGVAA 60
           MEKRRFVYALSLSIVVSFALVAIVSCIAAELHRTKTKDLRLDGKLCYLPESQAFRYGVAA
Sbjct: 1   MEKRRFVYALSLSIVVSFALVAIVSCIAAELHRTKTKDLRLDGKLCYLPESQAFRYGVAA 60

Query: 61  LACLVIAQVIGNVLFCTSCSLNSRGKKSNDQQPPRRSILAIILLVISWASFTVVILLLSA 120
           LAC VIAQVIGNVLFCT+CSLNSRGKK+NDQQPPRRSILAIILLVISWASFTVVILLLSA
Sbjct: 61  LACFVIAQVIGNVLFCTNCSLNSRGKKNNDQQPPRRSILAIILLVISWASFTVVILLLSA 120

Query: 121 ATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTCSIVCSAVAVLRKSLQIDESRK 180
           ATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVST SIVCSAVAVLRKSLQIDESRK
Sbjct: 121 ATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTGSIVCSAVAVLRKSLQIDESRK 180

Query: 181 TSTLPK 186
           TSTLPK
Sbjct: 181 TSTLPK 186

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BLAST of Cp4.1LG01g01270 vs. NCBI nr
Match: KAG7031081.1 (hypothetical protein SDJN02_05120, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 328 bits (840), Expect = 8.59e-112
Identity = 180/181 (99.45%), Postives = 180/181 (99.45%), Query Frame = 0


Query: 1   MEKRRFVYALSLSIVVSFALVAIVSCIAAELHRTKTKDLRLDGKLCYLPESQAFRYGVAA 60
           MEKRRFVYALSLSIVVSFALVAIVSCIAAELHRTKTKDLRLDGKLCYLPESQAFRYGVAA
Sbjct: 1   MEKRRFVYALSLSIVVSFALVAIVSCIAAELHRTKTKDLRLDGKLCYLPESQAFRYGVAA 60

Query: 61  LACLVIAQVIGNVLFCTSCSLNSRGKKSNDQQPPRRSILAIILLVISWASFTVVILLLSA 120
           LACLVIAQVIGNVLFCTSCSLNSRGKKSNDQQPPRRS LAIILLVISWASFTVVILLLSA
Sbjct: 61  LACLVIAQVIGNVLFCTSCSLNSRGKKSNDQQPPRRSNLAIILLVISWASFTVVILLLSA 120

Query: 121 ATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTCSIVCSAVAVLRKSLQIDESRK 180
           ATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTCSIVCSAVAVLRKSLQIDESRK
Sbjct: 121 ATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTCSIVCSAVAVLRKSLQIDESRK 180

[Close]

BLAST of Cp4.1LG01g01270 vs. ExPASy TrEMBL
Match: A0A6J1FSJ4 (uncharacterized protein LOC111446907 OS=Cucurbita moschata OX=3662 GN=LOC111446907 PE=4 SV=1)

HSP 1 Score: 336 bits (862), Expect = 4.40e-116
Identity = 185/186 (99.46%), Postives = 185/186 (99.46%), Query Frame = 0


Query: 1   MEKRRFVYALSLSIVVSFALVAIVSCIAAELHRTKTKDLRLDGKLCYLPESQAFRYGVAA 60
           MEKRRFVYALSLSIVVSFALVAIVSCIAAELHRTKTKDLRLDGKLCYLPESQAFRYGVAA
Sbjct: 1   MEKRRFVYALSLSIVVSFALVAIVSCIAAELHRTKTKDLRLDGKLCYLPESQAFRYGVAA 60

Query: 61  LACLVIAQVIGNVLFCTSCSLNSRGKKSNDQQPPRRSILAIILLVISWASFTVVILLLSA 120
           LACLVIAQVIGNVLFCTSCSLNSRGKKSNDQQ PRRSILAIILLVISWASFTVVILLLSA
Sbjct: 61  LACLVIAQVIGNVLFCTSCSLNSRGKKSNDQQRPRRSILAIILLVISWASFTVVILLLSA 120

Query: 121 ATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTCSIVCSAVAVLRKSLQIDESRK 180
           ATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTCSIVCSAVAVLRKSLQIDESRK
Sbjct: 121 ATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTCSIVCSAVAVLRKSLQIDESRK 180

Query: 181 TSTLPK 186
           TSTLPK
Sbjct: 181 TSTLPK 186

[Close]

BLAST of Cp4.1LG01g01270 vs. ExPASy TrEMBL
Match: A0A6J1J6B1 (uncharacterized protein LOC111481621 OS=Cucurbita maxima OX=3661 GN=LOC111481621 PE=4 SV=1)

HSP 1 Score: 331 bits (849), Expect = 4.22e-114
Identity = 182/186 (97.85%), Postives = 184/186 (98.92%), Query Frame = 0


Query: 1   MEKRRFVYALSLSIVVSFALVAIVSCIAAELHRTKTKDLRLDGKLCYLPESQAFRYGVAA 60
           MEKRRFVYALSLSIVVSFALVAIVSCIAAELHRTKTKDLRLDGKLCYLPESQAFRYGVAA
Sbjct: 1   MEKRRFVYALSLSIVVSFALVAIVSCIAAELHRTKTKDLRLDGKLCYLPESQAFRYGVAA 60

Query: 61  LACLVIAQVIGNVLFCTSCSLNSRGKKSNDQQPPRRSILAIILLVISWASFTVVILLLSA 120
           LAC VIAQVIGNVLFCT+CSLNSRGKK+NDQQPPRRSILAIILLVISWASFTVVILLLSA
Sbjct: 61  LACFVIAQVIGNVLFCTNCSLNSRGKKNNDQQPPRRSILAIILLVISWASFTVVILLLSA 120

Query: 121 ATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTCSIVCSAVAVLRKSLQIDESRK 180
           ATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVST SIVCSAVAVLRKSLQIDESRK
Sbjct: 121 ATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTGSIVCSAVAVLRKSLQIDESRK 180

Query: 181 TSTLPK 186
           TSTLPK
Sbjct: 181 TSTLPK 186

[Close]

BLAST of Cp4.1LG01g01270 vs. ExPASy TrEMBL
Match: A0A0A0KYL9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G056580 PE=4 SV=1)

HSP 1 Score: 251 bits (641), Expect = 1.66e-82
Identity = 140/186 (75.27%), Postives = 157/186 (84.41%), Query Frame = 0


Query: 1   MEKRRFVYALSLSIVVSFALVAIVSCIAAELHRTKTKDLRLDGKLCYLPESQAFRYGVAA 60
           M K RF YALSLSIVVS AL+A VSC+AAELHRTKTKDL+LDGKLCYLPESQAF YGVAA
Sbjct: 1   MGKHRFGYALSLSIVVSLALIAFVSCVAAELHRTKTKDLKLDGKLCYLPESQAFGYGVAA 60

Query: 61  LACLVIAQVIGNVLFCTSCSLNSRGKKSNDQQPPRRSILAIILLVISWASFTVVILLLSA 120
           LACLV+AQVIGN+L CTSCS+NSR KK ++Q PP+R  LA   LV+SWASFTVVILLLS 
Sbjct: 61  LACLVMAQVIGNILLCTSCSINSREKKRSEQ-PPKRPNLATFFLVVSWASFTVVILLLST 120

Query: 121 ATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTCSIVCSAVAVLRKSLQIDESRK 180
           A+SMSRQQ Y  GWL GECYLVKSGVY+AAAILIL+S CS V SAV V     +I+ESRK
Sbjct: 121 ASSMSRQQPYATGWLGGECYLVKSGVYVAAAILILISICSTVGSAVTV-----RINESRK 180

Query: 181 TSTLPK 186
           ++TLPK
Sbjct: 181 STTLPK 180

[Close]

BLAST of Cp4.1LG01g01270 vs. ExPASy TrEMBL
Match: A0A5A7T9R1 (DUF1218 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold118G00180 PE=4 SV=1)

HSP 1 Score: 245 bits (625), Expect = 4.53e-80
Identity = 137/186 (73.66%), Postives = 156/186 (83.87%), Query Frame = 0


Query: 1   MEKRRFVYALSLSIVVSFALVAIVSCIAAELHRTKTKDLRLDGKLCYLPESQAFRYGVAA 60
           M K  F YALSLSIVVS AL+A VSC+AAELHRTKTKDL+LDGKLCYLPESQAF YGVAA
Sbjct: 1   MGKHCFGYALSLSIVVSLALIAFVSCVAAELHRTKTKDLKLDGKLCYLPESQAFGYGVAA 60

Query: 61  LACLVIAQVIGNVLFCTSCSLNSRGKKSNDQQPPRRSILAIILLVISWASFTVVILLLSA 120
           LACLV+AQVIGN+L CTSCS+NSR KK ++Q PP+R  LA   LV+SWASFTVVILLL A
Sbjct: 61  LACLVMAQVIGNILLCTSCSINSREKKRSEQ-PPKRPNLATFFLVVSWASFTVVILLLIA 120

Query: 121 ATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTCSIVCSAVAVLRKSLQIDESRK 180
           A+SMSRQQ Y  GWL GECYLVKSGVY+AAAILIL+S C+ V SAV V     +++ESRK
Sbjct: 121 ASSMSRQQPYATGWLGGECYLVKSGVYVAAAILILISICTTVGSAVTV-----RMNESRK 180

Query: 181 TSTLPK 186
           ++TLPK
Sbjct: 181 STTLPK 180

[Close]

BLAST of Cp4.1LG01g01270 vs. ExPASy TrEMBL
Match: A0A1S3BTM2 (uncharacterized protein LOC103493027 OS=Cucumis melo OX=3656 GN=LOC103493027 PE=4 SV=1)

HSP 1 Score: 245 bits (625), Expect = 4.53e-80
Identity = 137/186 (73.66%), Postives = 156/186 (83.87%), Query Frame = 0


Query: 1   MEKRRFVYALSLSIVVSFALVAIVSCIAAELHRTKTKDLRLDGKLCYLPESQAFRYGVAA 60
           M K  F YALSLSIVVS AL+A VSC+AAELHRTKTKDL+LDGKLCYLPESQAF YGVAA
Sbjct: 1   MGKHCFGYALSLSIVVSLALIAFVSCVAAELHRTKTKDLKLDGKLCYLPESQAFGYGVAA 60

Query: 61  LACLVIAQVIGNVLFCTSCSLNSRGKKSNDQQPPRRSILAIILLVISWASFTVVILLLSA 120
           LACLV+AQVIGN+L CTSCS+NSR KK ++Q PP+R  LA   LV+SWASFTVVILLL A
Sbjct: 61  LACLVMAQVIGNILLCTSCSINSREKKRSEQ-PPKRPNLATFFLVVSWASFTVVILLLIA 120

Query: 121 ATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTCSIVCSAVAVLRKSLQIDESRK 180
           A+SMSRQQ Y  GWL GECYLVKSGVY+AAAILIL+S C+ V SAV V     +++ESRK
Sbjct: 121 ASSMSRQQPYATGWLGGECYLVKSGVYVAAAILILISICTTVGSAVTV-----RMNESRK 180

Query: 181 TSTLPK 186
           ++TLPK
Sbjct: 181 STTLPK 180

[Close]

BLAST of Cp4.1LG01g01270 vs. TAIR 10
Match: AT1G31720.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 121.3 bits (303), Expect = 8.1e-28
Identity = 71/184 (38.59%), Postives = 105/184 (57.07%), Query Frame = 0


Query: 10  LSLSIVVSFALVAIVSCIAAELHRTKT----------KDLRLDGKLCYLPESQAFRYGVA 69
           L    +  F L A   C++AE  + K           KDL+ DG+ CYLPE++AF  G+A
Sbjct: 17  LFFMFIFLFGLAAFFLCLSAEFQKAKALLRAQVFLKGKDLKWDGESCYLPENRAFGLGIA 76

Query: 70  ALACLVIAQVIGNVLFCTSCSLNSRGKKSNDQQPPRRSILAIILLVISWASFTVVILLLS 129
           AL C+ +AQ++GNV+ C       RG    D+   R +I  IILL+ SW +F V + L+S
Sbjct: 77  ALVCVSVAQIVGNVVIC-------RGFTKTDK--TRTTIFCIILLLFSWVNFAVAVTLIS 136

Query: 130 AATSMSRQQQYGAGWLSGECYLVKSGVYIAAAILILVSTCSIVCSAVAVLRKSLQIDESR 184
              SM+R+Q YG GWL+ ECYLVK GV+ A+  L + +  +I+ +    ++ SLQ++   
Sbjct: 137 VGASMNREQIYGKGWLNRECYLVKDGVFAASGFLSVTTMAAILGAFAFKVKPSLQVENHD 191

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BLAST of Cp4.1LG01g01270 vs. TAIR 10
Match: AT4G19370.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 112.1 bits (279), Expect = 4.9e-25
Identity = 65/163 (39.88%), Postives = 97/163 (59.51%), Query Frame = 0


Query: 13  SIVVSFALVAIVSCIAAELHRTKTKDLRLD-GKLCYLPESQAFRYGVAALACLVIAQVIG 72
           S+V S  LV+ ++C AAE  RT+ +D+R D  + CY+P S AF  G AA+ C  +AQ++G
Sbjct: 8   SVVFSLGLVSFITCFAAEFKRTQKEDIRWDTERNCYVPGSHAFGLGSAAVLCFCLAQIVG 67

Query: 73  NVLFCTSCSLNSRGKKSNDQQPPRRSILAIILLVISWASFTVVILLLSAATSMSRQQQYG 132
           N++   +   +    K  D        L  +LL++SW++F VV+L+LS A SMSR Q YG
Sbjct: 68  NIVVFRN---HRTRTKREDGYKITDLTLPTVLLLLSWSNFVVVVLILSTAISMSRAQAYG 127

Query: 133 AGWLSGECYLVKSGVYIAAAILILVSTCSIVCSAVAVLRKSLQ 175
            GWL  +CYLVK GV+ A+  L ++   ++  SA  +  K  Q
Sbjct: 128 EGWLDEDCYLVKDGVFAASGCLAILGLGALTISATRIKVKKQQ 167

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g01270 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A2RVU1	5.1e-27	39.77	Protein MODIFYING WALL LIGNIN-1 OS=Arabidopsis thaliana OX=3702 GN=MWL1 PE=1 SV=...	[more]
O65708	6.9e-24	39.88	Protein MODIFYING WALL LIGNIN-2 OS=Arabidopsis thaliana OX=3702 GN=MWL2 PE=2 SV=...	[more]

BLAST of Cp4.1LG01g01270 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023543619.1	3.86e-117	100.00	uncharacterized protein LOC111803449 [Cucurbita pepo subsp. pepo]	[more]
KAG6600430.1	4.50e-116	99.46	Protein MODIFYING WALL LIGNIN-1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022941598.1	9.09e-116	99.46	uncharacterized protein LOC111446907 [Cucurbita moschata]	[more]
XP_022982923.1	8.71e-114	97.85	uncharacterized protein LOC111481621 [Cucurbita maxima]	[more]
KAG7031081.1	8.59e-112	99.45	hypothetical protein SDJN02_05120, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of Cp4.1LG01g01270 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FSJ4	4.40e-116	99.46	uncharacterized protein LOC111446907 OS=Cucurbita moschata OX=3662 GN=LOC1114469...	[more]
A0A6J1J6B1	4.22e-114	97.85	uncharacterized protein LOC111481621 OS=Cucurbita maxima OX=3661 GN=LOC111481621...	[more]
A0A0A0KYL9	1.66e-82	75.27	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G056580 PE=4 SV=1	[more]
A0A5A7T9R1	4.53e-80	73.66	DUF1218 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A1S3BTM2	4.53e-80	73.66	uncharacterized protein LOC103493027 OS=Cucumis melo OX=3656 GN=LOC103493027 PE=...	[more]

BLAST of Cp4.1LG01g01270 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G31720.1	8.1e-28	38.59	Protein of unknown function (DUF1218)	[more]
AT4G19370.1	4.9e-25	39.88	Protein of unknown function (DUF1218)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009606	Modifying wall lignin-1/2	PFAM	PF06749	DUF1218	coord: 60..158 e-value: 2.5E-17 score: 63.1
None	No IPR available	PANTHER	PTHR31769:SF6	PROTEIN MODIFYING WALL LIGNIN-1	coord: 2..168
None	No IPR available	PANTHER	PTHR31769	OS07G0462200 PROTEIN-RELATED	coord: 2..168
None	No IPR available	PROSITE	PS51257	PROKAR_LIPOPROTEIN	coord: 1..26 score: 7.0

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g01270.1	Cp4.1LG01g01270.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane