Cp4.1LG01g01260 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG01g01260
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Polyamine-modulated factor 1/Kinetochore protein NNF
Location	Cp4.1LG01: 3102534 .. 3108288 (+)
RNA-Seq Expression	Cp4.1LG01g01260
Synteny	Cp4.1LG01g01260

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAATCCGTACGGAGCTCGGGTCGGCCCATCTGGCAATTAGTACTGGGCCACTTGGGCCGTTAATAACAAATTTGGGATTCAATTTTGTTATATTTACAATATTGACCCTCTATGTTTGAAATATTACATAATTACCAAGTTTCAACGCCAAAAACCTCCCGCCTTCGAATTCAACTTCTTCGTCTGTTCGTCTTTTTTTTGTCGTTGAAGCCGTGACTCGCCGGCACTGACCGGAGTCATCAGCAACTCGCTCACTTGCTGCCGTTTTCTAATTTCTGTTTTATGTTGTTATCGCGCCATTTTCGCAGAGTTATATGTTGGCGTGGAATTTAGCGAGGTAGGGTTGGGGATTGAAGTGTATAAACGTTTTGAAAATGGAGAAGAAGCACGAGATTGGTACTCCGCTTAGCTCCAGCCTGATTGATCTGACAAAGTCGTTCAAGCTCGCCGTTCGTTCTCTCCTGACTTCCTGTTCCAGGGAGGTAAGCACGAAAGTTGCTATAATGTGTATAATGTTCTATACTTTAGTAACCTTTTGTTCATATTTGTTTCTGGAAATGGTGTGGAATTGATGCTTTGGAATAAAAATTTCCTTATCAAGTGGCAATTTGGTTATGAGAGATATCTATAGGTTACTTTTCTTTTGAAAGAGACAGTAAATTTTGTATAGTTGTGCTTTTTTGTTTCGTAAAGGAGTTTCGGGAATGCTTTTCGGGATTTACGACCGCGGAGCAAGAAAATCTTCATCGTCTATTCGTTCAGGTACTACTGTGCTGCTCTTTTATGTCTTCCCCCATCCTCACAGGAAAGATGTGGTGAAAGAAAATTAACATCCTGTGGACACAGATGCTATAATTTAAATTGGAGATCTTGTGTTTCTTCTAATATGATTCTTGGACGTTTTCTTGCGTGGATCATTCTTAGTTTTGTGAATGTGCAAATCATGCGTTGTCTTCATGGTTAGCAGCATGTTATTTGGTTTACATGTTAAGAATTTACATATATTCTTATTGCTTTTAGTCTCTTTGGACATTGGAATAATGCATTTTGGTGTTCATCGAACTTTCAGGTTATAACTTCTTTGCATGGAAACATAGAGGTATATTTCCATTCAAGATTTTGCTTCGGAGTCCATCCTGACGATTCCATTTCGGGATCTCTTGTTTAGCAATATGATTATGTTGTTTCTTTCTTTTTCTCAACGTTAAGGCACTTAGAACATGTATGAGAGTGATATTGAAATTGCCAAATCACTTTTGTCATGTTCAAGTTACATGCCTTTAATCCTTCAAAATCATCATTCAAGAGCATCTTAGTATTAATTTTACAGTTTTAAATGTAATTTTAAATTCATCAAAATGGTTTTTGAATAATTAAAATCATGTTTGGGACTGATTTGAATACGACTAAAGCGATTTTAACCATTTCAAAATTGCTCCCGAACATCTTTAATGGCATAATGTGCTTATTCTATGCTTACGCTTACTGTTGTTCCAATTGGATGTTCTTTTTAGTTATAATCATGTCATAGAATAATCATAACTCTTTATAGTCTTTGGATTTTCTTCTCTAATTATTGTATACAAATTTTTAGCATGGAAGTTCTCATTTCTGCGCTGCAACGAGACACATGATTTAGAATAGAAAGAATATACTTATATATTGTTAATAGAAGATAACAAGCCATGATAACACAAAATTTGATTGCTTCTGTCTCTAAGAGATAGGAAATGGAAAAAAGAAAAGTTTCTAAAAAACACGCAATATTTGTGTATCAGTAGCATGCAAATTGCCTTCGCCTTTTGCAAAAAGTAACCCATGCAATCACCCGAACCTAGGCGTTTGCCATAGTCTAGTGCGGTTTTCCTCGTCCATTGCTGTTGGCTATTCACCTAACCCTGTCTTGAAATAAATCCTACAATAGGCTTCTCATCTTTTACATTTATGTGGTTATCGACAACATTTCATTTTAATTCTCTTTTTACATATTGCACTTCTGTTCAATAACACTGCCATTTCTGAAATATACAGGACGAGTTTGAGTCATTATGTATTGAAACCCAGGTAATTCTCCTGTCTGTTGACTTGTTTTGGTTATTTACAATTGGCTCTTGCTTGTTGGATGTGTCAGATTTGTTGGGATGGGGGGNAGTTGATTTTTTCGATCTGATCCAATTCAATGATTTTCTGTCTCCTTTTCATTTTTTTCCCTTCATGTGTATATATGTATATATATAATTTTAAGGCATAAGTTCAATAGGATTACAGTGAGGGCCTTCATTGAAATTATTGATGTATTAGTTCTAAAAAACTCAACCAGTTGCACAGTCTTGAATGTGTCAGATGCCTTTGTCCAAATAGGTGATGGTGGGTAAGAATTAGCGAAAATATGTGAGATTGATCGTGATGGTTCACATGATAGGATTACAGGAAAAGTAATCAACATTCTCTATTATTTCACTTCTTTAATGATAATTTTTCTTCTCAATTTCTAACTGCGTCACTTGTGCTTTGTCGTGAGTAATTGTAATTTGTTGGGGTTTTGTTTGAAGTGATGATGCATTGTTAATCATTTGTATCTATGTCAGGTGATTTTTCCTCTTCCATTGTGTGATTGTTTGCCTCATTGTAATAGTTTTGATTTATGCAGGTAGGACGTGTACTTGATAACGTTGAACAACTTTTGGAAGAACAAGATCTAGATCCATTGTACTCCAAGAAGTAGGTATCTTCTGCTGGGAGGTTACTTTCTCAATTAGTGGTCCAAATAAGTTGGGTTCTCTGATAGTTAAATCAATGATTTGATGTATAATTATATATAATGTTTGGATGAAAATTTGAAATGTGATTGGAAGTATAACAATTCATGGTGGTTTATGCAATTTTCCCTTGTTTTTCGTTACGCAAAGGCATGGGAAGTGATCTATTAAAGTCGGGCTTCCTTGGGCGGCCTTTACAGATTGAATTTCTCAGATGGAGTTAACAAATAACAATATCTAATGCAGGACTAATATAATGGATATTGCTAATTATCTGTCCATGACAAGGAAGAATGAGATCCAACACTTGAAGGACATGCTGAAAACGGTATGCAACTCTTGTAACAGTAGCGAACTTCTCTATCTAAAAACAAACCAGCTTAACTGACATTGTTACTCTTGTTTTATAATTATTTATTTCTGTGGGTGAGAGGGAGGGGGAGGGGGTCATTCTTAATTGATTCAAGTGTAATGGAAGAATTTAGGCCTTTCTTCATTGGTAAATCTTAGCATATCACCGCATTTCCCTTTAGAAGAACTGAATTCTTAAAGTCACAACATTACTGGTAGTTTTGTGTCCAATGGATCTTTTTTCTGTGATTGAAAATTGAAACAAATGAGTATGCTCTGATCCATCTGTAAGCACGCATCTTAGCTTTTAGGTAAAAAAGGCTCAATAATGCATTTGCTTTTGTTTGCTTGTATTTCTTGGGCGTGTCTCCCTGTGGTACTCTTTCTACTTTGTATTTTATGCATCTTCCTGTACCGTCCTTTCCACTTTAGTTCCCAAAAACAATCTGTGCTGTCTTTTCTTTTATGGTCCTTGCCAGCTGCCAATTAATGCTGTGTGGCTTCTCAAAGAATCATAGCAGATACTATCAATCAATTCCTTCACTAGATTTTTATGGTATACGTGGCAATTTCTTGACAAATTAAGTTTACAAGTTTCTTATGATTGAAACTTTTTCTAGTCTGAGGAACAGAACCGGCATATTCAAGCCCGTATCGATGTCCTTAAGAAAGGAGTGGAAGATGCCTCGGGCATGGCTGATGCTGTTGAGAAGGTGCAACTTTTATTTGCTTTCCAATGACCCAATGACCCAATTGGTATTTTTTAAGACAGTTTAATCTTAAAAAATGTGTTCATTAATGGCAAAGTCTGAAAATATTGATTGTTTTCTGATGAAAGTTCCAAGAATTTAAACCATCTTGAAGAGAAAATAAAATTCAAGAACTAGTTTCTAAGCCCTATATCTAATCCGCAAATGCTCACAGCTAAGAATCAGATGCAGAGCTTCTCCAACTGATGGTGATAACGGGACCTGCGACACATAACTCGCTGCTGCCTGTTGCCATCCTATTTGATTTCGTCCTGTTAAATGCCCTCTGGGATTGGCGTTGAATAATGAGGTCAGTATGTAATTCAGTAGATTTCTTTGTGTAAATTTCTTCAGCTTAGCTCAAGCTTAATATGTTTTATGTTGTGGATCATGTGTTCTTCTGTCAATTCAACCGCTTTGTCTTTCTATAAGAGAAATCTCTATATGGCTTTTGTTTTTCCTCTTCCACTCTCTGTGAAATCTCTATATGGCTTTTTTCTTTAGCTTAGTCCAATTTTATTTAGGTATATATGATCAGTCAGAATATTTATGGGCAACATTTCACAGAAATTTCTTGGTGATGCAAATATTCCACTCAATATTTGAATTTCATATCTCATAATTTCATTTGTCAATATATATTATAATCTTTATAAGAAAAGTAAGTGATTGACTTTTATGGGTGGGTGAATTATTTCCATGAAATGACTTTTGTTAACCAAATTAAGCGATTGACATTTGAATATCTCTAAATTTATGGTATTTGTCACTATTAAATTGTGATTTAGCATGACAACCGAATCTCAAATTCATTGAATTTTGGTTGATTAGATCATTCTAAGTAATGAGGAAATGTATTTAAATGATTAGAGAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNGCTGCTCAGAGTAACTGTTGTAATGAATTGATGTGATGATAACATGAAATGACGGACTTCAATACTCGAATATTTATTTGGATTAATCATTAAAATACAATACTTAATATGTCAATTTTTCATTCGCATTACTATCAGGATAATTTTAAAATATTTTTAAAAAAATTAAAATATAATATTGTAGCTTTTCAAACATCATTTTTAAAACAATATTATAGTCTTGTCCAAATAAATATAATATGCAATCTTTTTTGTCTTCTTATTAAAAATTGCAGCCACGAATGCAATAAGACCAACTTCAGCTCTTTTTGTTGCACCACGTGTCCCTCTCTCTCTCTCTCTCTCTCACATACATCATTTGATGCTAATTTTGCTCTCTCTCTCTCTCCCATAATATCTTTACAGCTAATATATCATTTGTTTTTCTTTTAAGAATATACGTTTTTTTGTCTTGTCTCTCTTTTTTTTTTTATGCAATAATTGTAATTTTCGACCTTGAAAAATAAATAAAGTTAATGTTGACAAATAAATACTAATGTAAATTACAAATTATTATTTAGTTCTTAAATTTTAAAATTTATAAATTTAATTCCTTAAAATAAGATATTTATTGTCTTTTTCAATATTTTTTTCCCTTTTTATATGTCTTGCCTTAACTTAAATAAGAATAATAAGTGAGCACAATATTTTTATTTTTATTTTTAAGATAACTTTCTCTCATTATTTTAATATTTTCTCTCACTTATTATTTTAATATGATTTAATTTATAGGCGTTGGAAACAAAAGTCAACGAAGGCAGCCACAGTCAGTACTTGCACAGAAGTCCAAACCATGAATCCCCCACATGATGGGGATGTCATTATTAGCCTTAAATTATTTAACTATCAAATATCAACAAAAACACTTTATAATATAATTTTTAAAGTGAAAATATCTGTTCTGGCCAATGTTTTAAAATCCATTGA

mRNA sequence

GAATCCGTACGGAGCTCGGGTCGGCCCATCTGGCAATTAGTACTGGGCCACTTGGGCCGTTAATAACAAATTTGGGATTCAATTTTGTTATATTTACAATATTGACCCTCTATGTTTGAAATATTACATAATTACCAAGTTTCAACGCCAAAAACCTCCCGCCTTCGAATTCAACTTCTTCGTCTGTTCGTCTTTTTTTTGTCGTTGAAGCCGTGACTCGCCGGCACTGACCGGAGTCATCAGCAACTCGCTCACTTGCTGCCGTTTTCTAATTTCTGTTTTATGTTGTTATCGCGCCATTTTCGCAGAGTTATATGTTGGCGTGGAATTTAGCGAGGTAGGGTTGGGGATTGAAGTGTATAAACGTTTTGAAAATGGAGAAGAAGCACGAGATTGGTACTCCGCTTAGCTCCAGCCTGATTGATCTGACAAAGTCGTTCAAGCTCGCCGTTCGTTCTCTCCTGACTTCCTGTTCCAGGGAGGAGTTTCGGGAATGCTTTTCGGGATTTACGACCGCGGAGCAAGAAAATCTTCATCGTCTATTCGTTCAGGTTATAACTTCTTTGCATGGAAACATAGAGGACGAGTTTGAGTCATTATGTATTGAAACCCAGGTAGGACGTGTACTTGATAACGTTGAACAACTTTTGGAAGAACAAGATCTAGATCCATTGTACTCCAAGAAGACTAATATAATGGATATTGCTAATTATCTGTCCATGACAAGGAAGAATGAGATCCAACACTTGAAGGACATGCTGAAAACGTCTGAGGAACAGAACCGGCATATTCAAGCCCGTATCGATGTCCTTAAGAAAGGAGTGGAAGATGCCTCGGGCATGGCTGATGCTGTTGAGAAGGTGCAACTTTTATTTGCTTTCCAATGACCCAATGACCCAATTGGTATTTTTTAAGACAGTTTAATCTTAAAAAATGTGTTCATTAATGGCAAAGTCTGAAAATATTGATTGTTTTCTGATGAAAGTTCCAAGAATTTAAACCATCTTGAAGAGAAAATAAAATTCAAGAACTAGTTTCTAAGCCCTATATCTAATCCGCAAATGCTCACAGCTAAGAATCAGATGCAGAGCTTCTCCAACTGATGGTGATAACGGGACCTGCGACACATAACTCGCTGCTGCCTGTTGCCATCCTATTTGATTTCGTCCTGTTAAATGCCCTCTGGGATTGGCGTTGAATAATGAGGCGTTGGAAACAAAAGTCAACGAAGGCAGCCACAGTCAGTACTTGCACAGAAGTCCAAACCATGAATCCCCCACATGATGGGGATGTCATTATTAGCCTTAAATTATTTAACTATCAAATATCAACAAAAACACTTTATAATATAATTTTTAAAGTGAAAATATCTGTTCTGGCCAATGTTTTAAAATCCATTGA

Coding sequence (CDS)

ATGGAGAAGAAGCACGAGATTGGTACTCCGCTTAGCTCCAGCCTGATTGATCTGACAAAGTCGTTCAAGCTCGCCGTTCGTTCTCTCCTGACTTCCTGTTCCAGGGAGGAGTTTCGGGAATGCTTTTCGGGATTTACGACCGCGGAGCAAGAAAATCTTCATCGTCTATTCGTTCAGGTTATAACTTCTTTGCATGGAAACATAGAGGACGAGTTTGAGTCATTATGTATTGAAACCCAGGTAGGACGTGTACTTGATAACGTTGAACAACTTTTGGAAGAACAAGATCTAGATCCATTGTACTCCAAGAAGACTAATATAATGGATATTGCTAATTATCTGTCCATGACAAGGAAGAATGAGATCCAACACTTGAAGGACATGCTGAAAACGTCTGAGGAACAGAACCGGCATATTCAAGCCCGTATCGATGTCCTTAAGAAAGGAGTGGAAGATGCCTCGGGCATGGCTGATGCTGTTGAGAAGGTGCAACTTTTATTTGCTTTCCAATGA

Protein sequence

MEKKHEIGTPLSSSLIDLTKSFKLAVRSLLTSCSREEFRECFSGFTTAEQENLHRLFVQVITSLHGNIEDEFESLCIETQVGRVLDNVEQLLEEQDLDPLYSKKTNIMDIANYLSMTRKNEIQHLKDMLKTSEEQNRHIQARIDVLKKGVEDASGMADAVEKVQLLFAFQ

Homology

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BLAST of Cp4.1LG01g01260 vs. NCBI nr
Match: XP_023527503.1 (uncharacterized protein LOC111790708 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 317 bits (812), Expect = 1.67e-108
Identity = 162/165 (98.18%), Postives = 165/165 (100.00%), Query Frame = 0


Query: 1   MEKKHEIGTPLSSSLIDLTKSFKLAVRSLLTSCSREEFRECFSGFTTAEQENLHRLFVQV 60
           MEKKHEIGTPLSSSLIDLTKSFKLAVRSLLTSCSREEFRECFSGFTTAEQENLHRLFVQV
Sbjct: 1   MEKKHEIGTPLSSSLIDLTKSFKLAVRSLLTSCSREEFRECFSGFTTAEQENLHRLFVQV 60

Query: 61  ITSLHGNIEDEFESLCIETQVGRVLDNVEQLLEEQDLDPLYSKKTNIMDIANYLSMTRKN 120
           ITSLHGNIEDEFESLCIETQVGRVLDNVEQLLEEQDLDPLYSKKTNIMDIANYLSMTRKN
Sbjct: 61  ITSLHGNIEDEFESLCIETQVGRVLDNVEQLLEEQDLDPLYSKKTNIMDIANYLSMTRKN 120

Query: 121 EIQHLKDMLKTSEEQNRHIQARIDVLKKGVEDASGMADAVEKVQL 165
           EIQHLKDMLKTSEEQNRHIQARIDVLKKGVEDASGMADAVEK+++
Sbjct: 121 EIQHLKDMLKTSEEQNRHIQARIDVLKKGVEDASGMADAVEKLRI 165

[Close]

BLAST of Cp4.1LG01g01260 vs. NCBI nr
Match: KAG6600431.1 (hypothetical protein SDJN03_05664, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031082.1 hypothetical protein SDJN02_05121 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 307 bits (786), Expect = 1.54e-104
Identity = 155/165 (93.94%), Postives = 162/165 (98.18%), Query Frame = 0


Query: 1   MEKKHEIGTPLSSSLIDLTKSFKLAVRSLLTSCSREEFRECFSGFTTAEQENLHRLFVQV 60
           MEKKHEI TPL+SSLIDL KSFKLAVRSLLTSCSREEFRECFSGFTT EQENLHRLFVQV
Sbjct: 1   MEKKHEISTPLNSSLIDLKKSFKLAVRSLLTSCSREEFRECFSGFTTVEQENLHRLFVQV 60

Query: 61  ITSLHGNIEDEFESLCIETQVGRVLDNVEQLLEEQDLDPLYSKKTNIMDIANYLSMTRKN 120
           ITSLHGNIEDEFESLCIETQVGR+LDNV+QLLEEQDLDPLYSKKTNIMDIANYLSMT+KN
Sbjct: 61  ITSLHGNIEDEFESLCIETQVGRILDNVQQLLEEQDLDPLYSKKTNIMDIANYLSMTKKN 120

Query: 121 EIQHLKDMLKTSEEQNRHIQARIDVLKKGVEDASGMADAVEKVQL 165
           EIQHLKDMLKTSEEQNRHIQARIDVLKKGVEDASGMADAVEK+++
Sbjct: 121 EIQHLKDMLKTSEEQNRHIQARIDVLKKGVEDASGMADAVEKLRI 165

[Close]

BLAST of Cp4.1LG01g01260 vs. NCBI nr
Match: XP_022941729.1 (uncharacterized protein LOC111447007 [Cucurbita moschata])

HSP 1 Score: 302 bits (773), Expect = 1.47e-102
Identity = 153/165 (92.73%), Postives = 159/165 (96.36%), Query Frame = 0


Query: 1   MEKKHEIGTPLSSSLIDLTKSFKLAVRSLLTSCSREEFRECFSGFTTAEQENLHRLFVQV 60
           MEKKHEI TPL+SSLIDL  SFKLAVRSLLTSCSREEFREC SGFTT EQENLHRLFVQV
Sbjct: 1   MEKKHEISTPLNSSLIDLKNSFKLAVRSLLTSCSREEFRECLSGFTTVEQENLHRLFVQV 60

Query: 61  ITSLHGNIEDEFESLCIETQVGRVLDNVEQLLEEQDLDPLYSKKTNIMDIANYLSMTRKN 120
           ITSLHGNIEDEFESLCIETQVGR+LDNVEQLLEEQDLDPLYSKKTNIMDI NYLSMT+KN
Sbjct: 61  ITSLHGNIEDEFESLCIETQVGRILDNVEQLLEEQDLDPLYSKKTNIMDIPNYLSMTKKN 120

Query: 121 EIQHLKDMLKTSEEQNRHIQARIDVLKKGVEDASGMADAVEKVQL 165
           EIQHLKDMLKTSEEQNRHIQARIDVLKKGVEDASGMADAVEK+++
Sbjct: 121 EIQHLKDMLKTSEEQNRHIQARIDVLKKGVEDASGMADAVEKLRI 165

[Close]

BLAST of Cp4.1LG01g01260 vs. NCBI nr
Match: XP_022982967.1 (uncharacterized protein LOC111481654 [Cucurbita maxima])

HSP 1 Score: 301 bits (771), Expect = 2.97e-102
Identity = 153/165 (92.73%), Postives = 162/165 (98.18%), Query Frame = 0


Query: 1   MEKKHEIGTPLSSSLIDLTKSFKLAVRSLLTSCSREEFRECFSGFTTAEQENLHRLFVQV 60
           MEKKH+I +PL+SSLIDL KSFKLAVRSLLTSCSREEFRECFSGFTTAEQENLH LFVQV
Sbjct: 1   MEKKHQIDSPLNSSLIDLKKSFKLAVRSLLTSCSREEFRECFSGFTTAEQENLHSLFVQV 60

Query: 61  ITSLHGNIEDEFESLCIETQVGRVLDNVEQLLEEQDLDPLYSKKTNIMDIANYLSMTRKN 120
           ITSLHGNIEDEFESLCIETQVGRVLDNVEQLLEEQDLDPLYSKKTNIMDIA+YLS+T+KN
Sbjct: 61  ITSLHGNIEDEFESLCIETQVGRVLDNVEQLLEEQDLDPLYSKKTNIMDIADYLSITKKN 120

Query: 121 EIQHLKDMLKTSEEQNRHIQARIDVLKKGVEDASGMADAVEKVQL 165
           EIQHLKDMLKTSEEQNRHIQARIDVLKKGVEDASGMADAVEK+++
Sbjct: 121 EIQHLKDMLKTSEEQNRHIQARIDVLKKGVEDASGMADAVEKLRI 165

[Close]

BLAST of Cp4.1LG01g01260 vs. NCBI nr
Match: XP_022931290.1 (uncharacterized protein LOC111437518 isoform X1 [Cucurbita moschata] >XP_023552810.1 uncharacterized protein LOC111810334 isoform X1 [Cucurbita pepo subsp. pepo] >KAG6577107.1 hypothetical protein SDJN03_24681, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 287 bits (734), Expect = 1.34e-96
Identity = 143/164 (87.20%), Postives = 156/164 (95.12%), Query Frame = 0


Query: 1   MEKKHEIGTPLSSSLIDLTKSFKLAVRSLLTSCSREEFRECFSGFTTAEQENLHRLFVQV 60
           M+KKHEIGTP+SSS IDL KSFKLAVRSLLTSCSREEFRECFS FTTAEQE LHRLF+QV
Sbjct: 1   MDKKHEIGTPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQV 60

Query: 61  ITSLHGNIEDEFESLCIETQVGRVLDNVEQLLEEQDLDPLYSKKTNIMDIANYLSMTRKN 120
           ITSLHGNIEDEFESLC+ETQVG VLDNVEQLLEEQDLDPLYSKKTNIM+IANYLSMT+KN
Sbjct: 61  ITSLHGNIEDEFESLCVETQVGLVLDNVEQLLEEQDLDPLYSKKTNIMEIANYLSMTKKN 120

Query: 121 EIQHLKDMLKTSEEQNRHIQARIDVLKKGVEDASGMADAVEKVQ 164
           EIQHLKDMLKT+EEQNRH+Q RID+L+KGV+DAS M DAVEK++
Sbjct: 121 EIQHLKDMLKTAEEQNRHVQGRIDILRKGVQDASAMEDAVEKLR 164

[Close]

BLAST of Cp4.1LG01g01260 vs. ExPASy TrEMBL
Match: A0A6J1FPA4 (uncharacterized protein LOC111447007 OS=Cucurbita moschata OX=3662 GN=LOC111447007 PE=4 SV=1)

HSP 1 Score: 302 bits (773), Expect = 7.13e-103
Identity = 153/165 (92.73%), Postives = 159/165 (96.36%), Query Frame = 0


Query: 1   MEKKHEIGTPLSSSLIDLTKSFKLAVRSLLTSCSREEFRECFSGFTTAEQENLHRLFVQV 60
           MEKKHEI TPL+SSLIDL  SFKLAVRSLLTSCSREEFREC SGFTT EQENLHRLFVQV
Sbjct: 1   MEKKHEISTPLNSSLIDLKNSFKLAVRSLLTSCSREEFRECLSGFTTVEQENLHRLFVQV 60

Query: 61  ITSLHGNIEDEFESLCIETQVGRVLDNVEQLLEEQDLDPLYSKKTNIMDIANYLSMTRKN 120
           ITSLHGNIEDEFESLCIETQVGR+LDNVEQLLEEQDLDPLYSKKTNIMDI NYLSMT+KN
Sbjct: 61  ITSLHGNIEDEFESLCIETQVGRILDNVEQLLEEQDLDPLYSKKTNIMDIPNYLSMTKKN 120

Query: 121 EIQHLKDMLKTSEEQNRHIQARIDVLKKGVEDASGMADAVEKVQL 165
           EIQHLKDMLKTSEEQNRHIQARIDVLKKGVEDASGMADAVEK+++
Sbjct: 121 EIQHLKDMLKTSEEQNRHIQARIDVLKKGVEDASGMADAVEKLRI 165

[Close]

BLAST of Cp4.1LG01g01260 vs. ExPASy TrEMBL
Match: A0A6J1IY03 (uncharacterized protein LOC111481654 OS=Cucurbita maxima OX=3661 GN=LOC111481654 PE=4 SV=1)

HSP 1 Score: 301 bits (771), Expect = 1.44e-102
Identity = 153/165 (92.73%), Postives = 162/165 (98.18%), Query Frame = 0


Query: 1   MEKKHEIGTPLSSSLIDLTKSFKLAVRSLLTSCSREEFRECFSGFTTAEQENLHRLFVQV 60
           MEKKH+I +PL+SSLIDL KSFKLAVRSLLTSCSREEFRECFSGFTTAEQENLH LFVQV
Sbjct: 1   MEKKHQIDSPLNSSLIDLKKSFKLAVRSLLTSCSREEFRECFSGFTTAEQENLHSLFVQV 60

Query: 61  ITSLHGNIEDEFESLCIETQVGRVLDNVEQLLEEQDLDPLYSKKTNIMDIANYLSMTRKN 120
           ITSLHGNIEDEFESLCIETQVGRVLDNVEQLLEEQDLDPLYSKKTNIMDIA+YLS+T+KN
Sbjct: 61  ITSLHGNIEDEFESLCIETQVGRVLDNVEQLLEEQDLDPLYSKKTNIMDIADYLSITKKN 120

Query: 121 EIQHLKDMLKTSEEQNRHIQARIDVLKKGVEDASGMADAVEKVQL 165
           EIQHLKDMLKTSEEQNRHIQARIDVLKKGVEDASGMADAVEK+++
Sbjct: 121 EIQHLKDMLKTSEEQNRHIQARIDVLKKGVEDASGMADAVEKLRI 165

[Close]

BLAST of Cp4.1LG01g01260 vs. ExPASy TrEMBL
Match: A0A6J1EZ15 (uncharacterized protein LOC111437518 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111437518 PE=4 SV=1)

HSP 1 Score: 287 bits (734), Expect = 6.48e-97
Identity = 143/164 (87.20%), Postives = 156/164 (95.12%), Query Frame = 0


Query: 1   MEKKHEIGTPLSSSLIDLTKSFKLAVRSLLTSCSREEFRECFSGFTTAEQENLHRLFVQV 60
           M+KKHEIGTP+SSS IDL KSFKLAVRSLLTSCSREEFRECFS FTTAEQE LHRLF+QV
Sbjct: 1   MDKKHEIGTPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQV 60

Query: 61  ITSLHGNIEDEFESLCIETQVGRVLDNVEQLLEEQDLDPLYSKKTNIMDIANYLSMTRKN 120
           ITSLHGNIEDEFESLC+ETQVG VLDNVEQLLEEQDLDPLYSKKTNIM+IANYLSMT+KN
Sbjct: 61  ITSLHGNIEDEFESLCVETQVGLVLDNVEQLLEEQDLDPLYSKKTNIMEIANYLSMTKKN 120

Query: 121 EIQHLKDMLKTSEEQNRHIQARIDVLKKGVEDASGMADAVEKVQ 164
           EIQHLKDMLKT+EEQNRH+Q RID+L+KGV+DAS M DAVEK++
Sbjct: 121 EIQHLKDMLKTAEEQNRHVQGRIDILRKGVQDASAMEDAVEKLR 164

[Close]

BLAST of Cp4.1LG01g01260 vs. ExPASy TrEMBL
Match: A0A6J1J4K9 (uncharacterized protein LOC111483373 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111483373 PE=4 SV=1)

HSP 1 Score: 283 bits (723), Expect = 3.07e-95
Identity = 141/164 (85.98%), Postives = 155/164 (94.51%), Query Frame = 0


Query: 1   MEKKHEIGTPLSSSLIDLTKSFKLAVRSLLTSCSREEFRECFSGFTTAEQENLHRLFVQV 60
           M+KKHEIGTP+SSS IDL KSFKLAVRSLLTSCSR EFRECFS FTTAEQE LHRLF+QV
Sbjct: 1   MDKKHEIGTPVSSSQIDLKKSFKLAVRSLLTSCSRGEFRECFSRFTTAEQEYLHRLFIQV 60

Query: 61  ITSLHGNIEDEFESLCIETQVGRVLDNVEQLLEEQDLDPLYSKKTNIMDIANYLSMTRKN 120
           ITSLHGNIEDEFESLC+ET+VG VLDNVEQLLEEQDLDPLYSKKTNIM+IANYLSMT+KN
Sbjct: 61  ITSLHGNIEDEFESLCVETKVGLVLDNVEQLLEEQDLDPLYSKKTNIMEIANYLSMTKKN 120

Query: 121 EIQHLKDMLKTSEEQNRHIQARIDVLKKGVEDASGMADAVEKVQ 164
           EIQHLKDMLKT+EEQNRH+Q RID+L+KGV+DAS M DAVEK++
Sbjct: 121 EIQHLKDMLKTAEEQNRHVQGRIDILRKGVQDASAMEDAVEKLR 164

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BLAST of Cp4.1LG01g01260 vs. ExPASy TrEMBL
Match: A0A6J1C7G2 (uncharacterized protein LOC111008110 OS=Momordica charantia OX=3673 GN=LOC111008110 PE=4 SV=1)

HSP 1 Score: 274 bits (701), Expect = 6.67e-92
Identity = 138/163 (84.66%), Postives = 150/163 (92.02%), Query Frame = 0


Query: 1   MEKKHEIGTPLSSSLIDLTKSFKLAVRSLLTSCSREEFRECFSGFTTAEQENLHRLFVQV 60
           MEKKHE+ TP SSS +DL KSFKLAVRSLLTSCSREEFRECF  FT AEQE LHRLF+QV
Sbjct: 1   MEKKHEVSTPASSSHLDLKKSFKLAVRSLLTSCSREEFRECFLRFTNAEQEYLHRLFIQV 60

Query: 61  ITSLHGNIEDEFESLCIETQVGRVLDNVEQLLEEQDLDPLYSKKTNIMDIANYLSMTRKN 120
           ITSLHGNIEDEFESLCIETQVG +LDNVEQLLEEQ LDPLYSKKTNIMDIANYLSMT+KN
Sbjct: 61  ITSLHGNIEDEFESLCIETQVGPILDNVEQLLEEQGLDPLYSKKTNIMDIANYLSMTKKN 120

Query: 121 EIQHLKDMLKTSEEQNRHIQARIDVLKKGVEDASGMADAVEKV 163
           EIQ LKDMLKT+EEQN+H+QARID+L+KGV+D SG ADAVEK+
Sbjct: 121 EIQRLKDMLKTAEEQNQHVQARIDLLRKGVQDVSGTADAVEKL 163

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BLAST of Cp4.1LG01g01260 vs. TAIR 10
Match: AT4G19350.1 (embryo defective 3006 )

HSP 1 Score: 150.2 bits (378), Expect = 1.5e-36
Identity = 82/163 (50.31%), Postives = 113/163 (69.33%), Query Frame = 0


Query: 1   MEKKHEIGTPLSSSLIDLTKSFKLAVRSLLTSCSREEFRECFSGFTTAEQENLHRLFVQV 60
           MEK         S    L KSFK  +R LLT+CS+++F + FS F+ AEQE L +L+ +V
Sbjct: 1   MEKPGHETDIAGSRRTHLKKSFKSTLRHLLTACSKQDFVDIFSKFSGAEQELLFQLYTRV 60

Query: 61  ITSLHGNIEDEFESLCIETQVGRVLDNVEQLLEEQDLDPLYSKKTNIMDIANYLSMTRKN 120
           + +LH  IE+EF+  C ETQVG +LD VE+L+EEQ LDPL+S KT++M IA  L+ ++KN
Sbjct: 61  VVNLHQTIEEEFDEQCHETQVGPILDTVEELVEEQSLDPLFSDKTDVMAIAYDLTTSKKN 120

Query: 121 EIQHLKDMLKTSEEQNRHIQARIDVLKKGVEDASGMADAVEKV 164
           EIQ L  +L+ +EEQNR  +ARI +LKK  +D SG AD +EK+
Sbjct: 121 EIQKLTVLLQRAEEQNRQKEARISMLKKQTQDLSGTADRIEKL 163

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g01260 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG01g01260 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023527503.1	1.67e-108	98.18	uncharacterized protein LOC111790708 [Cucurbita pepo subsp. pepo]	[more]
KAG6600431.1	1.54e-104	93.94	hypothetical protein SDJN03_05664, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022941729.1	1.47e-102	92.73	uncharacterized protein LOC111447007 [Cucurbita moschata]	[more]
XP_022982967.1	2.97e-102	92.73	uncharacterized protein LOC111481654 [Cucurbita maxima]	[more]
XP_022931290.1	1.34e-96	87.20	uncharacterized protein LOC111437518 isoform X1 [Cucurbita moschata] >XP_0235528...	[more]

BLAST of Cp4.1LG01g01260 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FPA4	7.13e-103	92.73	uncharacterized protein LOC111447007 OS=Cucurbita moschata OX=3662 GN=LOC1114470...	[more]
A0A6J1IY03	1.44e-102	92.73	uncharacterized protein LOC111481654 OS=Cucurbita maxima OX=3661 GN=LOC111481654...	[more]
A0A6J1EZ15	6.48e-97	87.20	uncharacterized protein LOC111437518 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1J4K9	3.07e-95	85.98	uncharacterized protein LOC111483373 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1C7G2	6.67e-92	84.66	uncharacterized protein LOC111008110 OS=Momordica charantia OX=3673 GN=LOC111008...	[more]

BLAST of Cp4.1LG01g01260 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G19350.1	1.5e-36	50.31	embryo defective 3006	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 122..142
None	No IPR available	PANTHER	PTHR15459:SF3	POLYAMINE-MODULATED FACTOR 1	coord: 12..163
IPR007128	Nuclear MIS12/MIND complex subunit PMF1/Nnf1	PFAM	PF03980	Nnf1	coord: 52..144 e-value: 7.4E-8 score: 32.7
IPR007128	Nuclear MIS12/MIND complex subunit PMF1/Nnf1	PANTHER	PTHR15459	POLYAMINE-MODULATED FACTOR 1	coord: 12..163

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g01260.1	Cp4.1LG01g01260.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007049	cell cycle
biological_process	GO:0051301	cell division
biological_process	GO:0007059	chromosome segregation
cellular_component	GO:0000818	nuclear MIS12/MIND complex