Cp4.1LG01g00340 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGGAATGGATTTGTTCTCCAGTCTTCTTGTACCTTCGGTTAAGTACTCTGAACATCGAAACCACACCAAGCACTTTTCTCCGCCATTAATGGCGCCTAAGCTCGTCAGGATCTCTGTAACTGACGAAGATGCCACTGATTCTTCTAGTGATGAAAAGGAAGAACAACACGTCTCCCGACGAGTCAAGAAGTTTATTACCGAGATTACGATCGAGGCCTTGGGGAGAAGAGACCGGAAGAAGTCCACCGCCGGGAAATCGAATTTACGGAAGCCGCTACAGCCGGGAACTAAGAAATTCCGCGGCGTGAGGCAACGGCCCTGGGGAAAATGGGCGGCTGAGATTAGAGATCCTTTGCGACGTGTACGCATCTGGTTAGGTACCTACAATACGGCTGAAGAAGCCGCTATGGTGTACGACAACGCTGCCATTCAACTCCGTGGACCCACCGCCCAAACTAACTTCAGTCCTCCGCCGGCAGTGAGCTCCAGCAATGTCTCCGTTGAGGAGACCAACGACAATCTCTCTTCTCCGACCTCCGTTCTTCGTTGCCCCTCGCCGTCGACGAATGAAAAATCCCCTGAAACTGCTTCAACCGGTAAAGAAACCCGCCGTGCCGACTCCTTCTGTTCGAACTGCGATTCGTTTTACCCCAACGATATCTTCGACTTCCAACCGCCGATTCCGTCACTATTCGGCGATACAGCTCTCAACGACGCCGTTTTGAGGGGCGACTACGGCAGTAGCATGTTTATTAACCCGGATGATGATTTCGGGTTCGAGTTAGGATTCGGGTTCAGACCCTCCACGTGGCATATGAGTGAAAATTCTTTCCAAGACATCAGCGACATATTCGGGTCGGATCCTCTCGTTGCGCTTTAA ATGGAAGGAATGGATTTGTTCTCCAGTCTTCTTGTACCTTCGGTTAAGTACTCTGAACATCGAAACCACACCAAGCACTTTTCTCCGCCATTAATGGCGCCTAAGCTCGTCAGGATCTCTGTAACTGACGAAGATGCCACTGATTCTTCTAAAACCCGCCGTGCCGACTCCTTCTGTTCGAACTGCGATTCGTTTTACCCCAACGATATCTTCGACTTCCAACCGCCGATTCCGTCACTATTCGGCGATACAGCTCTCAACGACGCCGTTTTGAGGGGCGACTACGGCAGTAGCATGTTTATTAACCCGGATGATGATTTCGGGTTCGAGTTAGGATTCGGGTTCAGACCCTCCACGTGGCATATGAGTGAAAATTCTTTCCAAGACATCAGCGACATATTCGGGTCGGATCCTCTCGTTGCGCTTTAA ATGGAAGGAATGGATTTGTTCTCCAGTCTTCTTGTACCTTCGGTTAAGTACTCTGAACATCGAAACCACACCAAGCACTTTTCTCCGCCATTAATGGCGCCTAAGCTCGTCAGGATCTCTGTAACTGACGAAGATGCCACTGATTCTTCTAAAACCCGCCGTGCCGACTCCTTCTGTTCGAACTGCGATTCGTTTTACCCCAACGATATCTTCGACTTCCAACCGCCGATTCCGTCACTATTCGGCGATACAGCTCTCAACGACGCCGTTTTGAGGGGCGACTACGGCAGTAGCATGTTTATTAACCCGGATGATGATTTCGGGTTCGAGTTAGGATTCGGGTTCAGACCCTCCACGTGGCATATGAGTGAAAATTCTTTCCAAGACATCAGCGACATATTCGGGTCGGATCCTCTCGTTGCGCTTTAA MEGMDLFSSLLVPSVKYSEHRNHTKHFSPPLMAPKLVRISVTDEDATDSSKTRRADSFCSNCDSFYPNDIFDFQPPIPSLFGDTALNDAVLRGDYGSSMFINPDDDFGFELGFGFRPSTWHMSENSFQDISDIFGSDPLVAL Homology
BLAST of Cp4.1LG01g00340 vs. ExPASy Swiss-Prot
Match: Q9SUQ2 (Ethylene-responsive transcription factor CRF2 OS=Arabidopsis thaliana OX=3702 GN=CRF2 PE=1 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 7.7e-07 Identity = 31/79 (39.24%), Postives = 45/79 (56.96%), Query Frame = 0
BLAST of Cp4.1LG01g00340 vs. ExPASy Swiss-Prot
Match: O82503 (Ethylene-responsive transcription factor CRF1 OS=Arabidopsis thaliana OX=3702 GN=CRF1 PE=1 SV=1) HSP 1 Score: 48.1 bits (113), Expect = 9.4e-05 Identity = 28/79 (35.44%), Postives = 42/79 (53.16%), Query Frame = 0
BLAST of Cp4.1LG01g00340 vs. NCBI nr
Match: XP_023512254.1 (ethylene-responsive transcription factor CRF2-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 235 bits (599), Expect = 5.93e-75 Identity = 141/294 (47.96%), Postives = 142/294 (48.30%), Query Frame = 0
BLAST of Cp4.1LG01g00340 vs. NCBI nr
Match: XP_022942751.1 (ethylene-responsive transcription factor CRF2-like [Cucurbita moschata] >KAG7031174.1 Ethylene-responsive transcription factor CRF2, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 226 bits (575), Expect = 3.28e-71 Identity = 139/302 (46.03%), Postives = 142/302 (47.02%), Query Frame = 0
BLAST of Cp4.1LG01g00340 vs. NCBI nr
Match: XP_022982125.1 (ethylene-responsive transcription factor CRF2-like [Cucurbita maxima]) HSP 1 Score: 223 bits (569), Expect = 2.58e-70 Identity = 139/301 (46.18%), Postives = 140/301 (46.51%), Query Frame = 0
BLAST of Cp4.1LG01g00340 vs. NCBI nr
Match: KAG6600534.1 (Ethylene-responsive transcription factor CRF2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 219 bits (558), Expect = 1.13e-68 Identity = 136/299 (45.48%), Postives = 139/299 (46.49%), Query Frame = 0
BLAST of Cp4.1LG01g00340 vs. NCBI nr
Match: XP_038904776.1 (ethylene-responsive transcription factor CRF1-like [Benincasa hispida]) HSP 1 Score: 144 bits (364), Expect = 3.10e-39 Identity = 106/321 (33.02%), Postives = 119/321 (37.07%), Query Frame = 0
BLAST of Cp4.1LG01g00340 vs. ExPASy TrEMBL
Match: A0A6J1FPS6 (ethylene-responsive transcription factor CRF2-like OS=Cucurbita moschata OX=3662 GN=LOC111447693 PE=4 SV=1) HSP 1 Score: 226 bits (575), Expect = 1.59e-71 Identity = 139/302 (46.03%), Postives = 142/302 (47.02%), Query Frame = 0
BLAST of Cp4.1LG01g00340 vs. ExPASy TrEMBL
Match: A0A6J1J1R4 (ethylene-responsive transcription factor CRF2-like OS=Cucurbita maxima OX=3661 GN=LOC111481052 PE=4 SV=1) HSP 1 Score: 223 bits (569), Expect = 1.25e-70 Identity = 139/301 (46.18%), Postives = 140/301 (46.51%), Query Frame = 0
BLAST of Cp4.1LG01g00340 vs. ExPASy TrEMBL
Match: A0A6J1ETA3 (ethylene-responsive transcription factor CRF2-like OS=Cucurbita moschata OX=3662 GN=LOC111437533 PE=4 SV=1) HSP 1 Score: 139 bits (349), Expect = 2.47e-37 Identity = 65/86 (75.58%), Postives = 74/86 (86.05%), Query Frame = 0
BLAST of Cp4.1LG01g00340 vs. ExPASy TrEMBL
Match: A0A5D3D045 (Ethylene-responsive transcription factor CRF2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G004170 PE=4 SV=1) HSP 1 Score: 136 bits (343), Expect = 1.85e-36 Identity = 68/106 (64.15%), Postives = 77/106 (72.64%), Query Frame = 0
BLAST of Cp4.1LG01g00340 vs. ExPASy TrEMBL
Match: A0A5A7TRV9 (Ethylene-responsive transcription factor CRF2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G001690 PE=4 SV=1) HSP 1 Score: 136 bits (343), Expect = 1.85e-36 Identity = 68/106 (64.15%), Postives = 77/106 (72.64%), Query Frame = 0
BLAST of Cp4.1LG01g00340 vs. TAIR 10
Match: AT4G23750.1 (cytokinin response factor 2 ) HSP 1 Score: 55.1 bits (131), Expect = 5.4e-08 Identity = 31/79 (39.24%), Postives = 45/79 (56.96%), Query Frame = 0
BLAST of Cp4.1LG01g00340 vs. TAIR 10
Match: AT4G23750.2 (cytokinin response factor 2 ) HSP 1 Score: 55.1 bits (131), Expect = 5.4e-08 Identity = 31/79 (39.24%), Postives = 45/79 (56.96%), Query Frame = 0
BLAST of Cp4.1LG01g00340 vs. TAIR 10
Match: AT4G11140.1 (cytokinin response factor 1 ) HSP 1 Score: 48.1 bits (113), Expect = 6.7e-06 Identity = 28/79 (35.44%), Postives = 42/79 (53.16%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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