Cp4.1LG00g04720 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG00g04720
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	remorin-like
Location	Cp4.1LG00: 18073511 .. 18075086 (+)
RNA-Seq Expression	Cp4.1LG00g04720
Synteny	Cp4.1LG00g04720

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCGGCGCCGACGAGTCTGAACCAGATTCGCAGCCGCCAGTGCCGCTTCAAAACAACTCCCTCATTCCCCACGGTATTTTTCTTCCCTTCCTTTTTCTTTTTCTGTTTGGTTTCTGGGAAAACCAAAATCACTCTTTCCTGGAATGTTTTTGTTTATAGCACCTTTCTTCTATCAGTCTCTTTGGGTATCTGTGTAAGACGAATAAGACTCTCCACAATGATATGATATTGTCCACTTTGAGCATAAGCTCTTGTGTCTTTGTTTTGAGCTTTCCCAAAATGTCTAATAACAATGGAGTTAGTATTACTCACTTATAAACCCATAATCATTCCCTACATCATCCAACACTCTTGCCTCTCTTTTGTGTGTGTTTGGCTTCCGGGAAAATCTTACTTTCCCAGAAAATGCATCCTTGAATTATTGAACCAAAAAATAGTAAAAAGTGGTTTTTGAATGTACTGGGAAAAGAGTGCCATGACTGATCAGCTTTTTTTGCTACACAGCTTTATTGCCTTGTCTAGAAATTTTTGTATACCCTAATTTCTGAATATTTATGTAAATTATTACAAGACATAAAATATATATATTGTCTTTTGTCTGGTTGTTCTCAATAATCATTTATTTGGGAAGAAAACAGTGTCCAATTTATTTGTTTTCCAATCATTTGTTGGTCCTCTTTGGAAATAAATCTGCAAAATGACAGAAAACTAATAATGGTGACAATCACATTCTTCATTAAAAGAAAAAAAAAAACATGTTCTTGAACAAATTATGTGCTTTATTCGGTTCATGTCATTTTTTGTTGTATTAGTGGCTGATTTCTTGTCTAACAAAGACAAAATAAATGACAGCGGTTTCAGCTCCTCATTCCGACAAACTTGTTCCTCCAAAGGACAGAGGTAAAACTCTCCATTTTCTTTCTAGTTGCCTCTAATTCAACAGTATTTGCAAGATTCTTGCGTTCGAGATATTCGAAAGTGTTCGTTAAAAGTAGAAAACGAAACAAAGAAATTGTTATAGAACGGGGTTTTGTGATCTTAGATGTTGCGTTGGCTCGTGTCGAATTGGAGAAGAAGTTGGCATTGATCAAAGCATGGGAGGAGAGTGAGAAGATCAAGGCAGAGAACAGGTAAACTATAGAGAAGTTTGTTCGTTGTTGAATTTTGGATTCTGTACTTGAAATCTTTGGAACAGGGCATACAAACGGCTCTCTGCTATTGATTCTTGGGAGAATACCAAAAAAGCTTCAATACAAGCACAGCTGATGAAGTTAGAGGTAAATTTTCATTTCTTTACTTCTTTCTCATTGATTAAGACTCGGGTTTTCGATACGAGTTTTGAAGCGTTTGGTCTTTTGTGAAACGAAAGGAGAAAATGGAGAAGAAGAAAGCTGAGTATGGCGAGCTAATGAAGAACAAAATCGTTGGAATTCACAAGCAAGGTGAAGAGAAGAAAGCAACCATTGAAGCCGAGCGAAGAGAACAGTGTCTGAAGGTCGAGGAGACTGCAGCAAAATATCGAGCTTCCGGGTTCACCCCGAAGGCTCTACTACTCAAATGCTTCAGTGGTTGA

mRNA sequence

ATGGGCGGCGCCGACGAGTCTGAACCAGATTCGCAGCCGCCAGTGCCGCTTCAAAACAACTCCCTCATTCCCCACGTGGCTGATTTCTTGTCTAACAAAGACAAAATAAATGACAGCGGTTTCAGCTCCTCATTCCGACAAACTTGTTCCTCCAAAGGACAGAGAAAACGAAACAAAGAAATTGTTATAGAACGGGGTTTTGTGATCTTAGATGTTGCGTTGGCTCGTGTCGAATTGGAGAAGAAGTTGGCATTGATCAAAGCATGGGAGGAGAGTGAGAAGATCAAGGCAGAGAACAGGGCATACAAACGGCTCTCTGCTATTGATTCTTGGGAGAATACCAAAAAAGCTTCAATACAAGCACAGCTGATGAAGTTAGAGGAGAAAATGGAGAAGAAGAAAGCTGAGTATGGCGAGCTAATGAAGAACAAAATCGTTGGAATTCACAAGCAAGGTGAAGAGAAGAAAGCAACCATTGAAGCCGAGCGAAGAGAACAGTGTCTGAAGGTCGAGGAGACTGCAGCAAAATATCGAGCTTCCGGGTTCACCCCGAAGGCTCTACTACTCAAATGCTTCAGTGGTTGA

Coding sequence (CDS)

ATGGGCGGCGCCGACGAGTCTGAACCAGATTCGCAGCCGCCAGTGCCGCTTCAAAACAACTCCCTCATTCCCCACGTGGCTGATTTCTTGTCTAACAAAGACAAAATAAATGACAGCGGTTTCAGCTCCTCATTCCGACAAACTTGTTCCTCCAAAGGACAGAGAAAACGAAACAAAGAAATTGTTATAGAACGGGGTTTTGTGATCTTAGATGTTGCGTTGGCTCGTGTCGAATTGGAGAAGAAGTTGGCATTGATCAAAGCATGGGAGGAGAGTGAGAAGATCAAGGCAGAGAACAGGGCATACAAACGGCTCTCTGCTATTGATTCTTGGGAGAATACCAAAAAAGCTTCAATACAAGCACAGCTGATGAAGTTAGAGGAGAAAATGGAGAAGAAGAAAGCTGAGTATGGCGAGCTAATGAAGAACAAAATCGTTGGAATTCACAAGCAAGGTGAAGAGAAGAAAGCAACCATTGAAGCCGAGCGAAGAGAACAGTGTCTGAAGGTCGAGGAGACTGCAGCAAAATATCGAGCTTCCGGGTTCACCCCGAAGGCTCTACTACTCAAATGCTTCAGTGGTTGA

Protein sequence

MGGADESEPDSQPPVPLQNNSLIPHVADFLSNKDKINDSGFSSSFRQTCSSKGQRKRNKEIVIERGFVILDVALARVELEKKLALIKAWEESEKIKAENRAYKRLSAIDSWENTKKASIQAQLMKLEEKMEKKKAEYGELMKNKIVGIHKQGEEKKATIEAERREQCLKVEETAAKYRASGFTPKALLLKCFSG

Homology

[Close]

BLAST of Cp4.1LG00g04720 vs. ExPASy Swiss-Prot
Match: Q9FFA5 (Remorin 1.4 OS=Arabidopsis thaliana OX=3702 GN=REM1.4 PE=1 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 5.9e-34
Identity = 81/131 (61.83%), Postives = 102/131 (77.86%), Query Frame = 0


Query: 59  KEIVIER--GFVILDVALARVELEKKLALIKAWEESEKIKAENRAYKRLSAIDSWENTKK 118
           KE+  E+  G V  D  LARVE EK+++LIKAWEE+EK K EN+A K+LS+I SWEN KK
Sbjct: 68  KEVEEEKKEGSVNRDAVLARVETEKRMSLIKAWEEAEKCKVENKAEKKLSSIGSWENNKK 127

Query: 119 ASIQAQLMKLEEKMEKKKAEYGELMKNKIVGIHKQGEEKKATIEAERREQCLKVEETAAK 178
           A+++A+L K+EE++EKKKAEY E MKNKI  IHK+ EEK+A IEA+R E+ LK EE AAK
Sbjct: 128 AAVEAELKKMEEQLEKKKAEYVEQMKNKIAQIHKEAEEKRAMIEAKRGEEILKAEELAAK 187

Query: 179 YRASGFTPKAL 188
           YRA+G  PK L
Sbjct: 188 YRATGTAPKKL 198

[Close]

BLAST of Cp4.1LG00g04720 vs. ExPASy Swiss-Prot
Match: P93788 (Remorin OS=Solanum tuberosum OX=4113 PE=1 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 5.0e-33
Identity = 76/125 (60.80%), Postives = 99/125 (79.20%), Query Frame = 0


Query: 64  ERGFVILDVALARVELEKKLALIKAWEESEKIKAENRAYKRLSAIDSWENTKKASIQAQL 123
           + G +  D  LARV  EK+++LIKAWEESEK KAEN+A K++SAI +WEN+KKA+++A+L
Sbjct: 71  KEGSIDRDAVLARVATEKRVSLIKAWEESEKSKAENKAQKKVSAIGAWENSKKANLEAEL 130

Query: 124 MKLEEKMEKKKAEYGELMKNKIVGIHKQGEEKKATIEAERREQCLKVEETAAKYRASGFT 183
            K+EE++EKKKAEY E MKNKI  +HK+ EEK+A IEA+R E  LK EE AAKYRA+G  
Sbjct: 131 KKMEEQLEKKKAEYTEKMKNKIALLHKEAEEKRAMIEAKRGEDLLKAEELAAKYRATGTA 190

Query: 184 PKALL 189
           PK +L
Sbjct: 191 PKKIL 195

[Close]

BLAST of Cp4.1LG00g04720 vs. ExPASy Swiss-Prot
Match: O80837 (Remorin OS=Arabidopsis thaliana OX=3702 GN=DBP PE=1 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 8.5e-33
Identity = 73/116 (62.93%), Postives = 93/116 (80.17%), Query Frame = 0


Query: 71  DVALARVELEKKLALIKAWEESEKIKAENRAYKRLSAIDSWENTKKASIQAQLMKLEEKM 130
           DV LA +E EKK + IKAWEESEK KAENRA K++S + +WEN+KKA+++AQL K+EEK+
Sbjct: 70  DVILADLEKEKKTSFIKAWEESEKSKAENRAQKKISDVHAWENSKKAAVEAQLRKIEEKL 129

Query: 131 EKKKAEYGELMKNKIVGIHKQGEEKKATIEAERREQCLKVEETAAKYRASGFTPKA 187
           EKKKA+YGE MKNK+  IHK  EEK+A +EA++ E+ LK EE  AKYRA+G  PKA
Sbjct: 130 EKKKAQYGEKMKNKVAAIHKLAEEKRAMVEAKKGEELLKAEEMGAKYRATGVVPKA 185

[Close]

BLAST of Cp4.1LG00g04720 vs. ExPASy Swiss-Prot
Match: Q9M2D8 (Uncharacterized protein At3g61260 OS=Arabidopsis thaliana OX=3702 GN=At3g61260 PE=1 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 5.5e-32
Identity = 70/116 (60.34%), Postives = 94/116 (81.03%), Query Frame = 0


Query: 71  DVALARVELEKKLALIKAWEESEKIKAENRAYKRLSAIDSWENTKKASIQAQLMKLEEKM 130
           DV LA +  EK+L+ ++AWEESEK KAEN+A K+++ + +WEN+KKA+++AQL K+EE++
Sbjct: 92  DVKLADLSKEKRLSFVRAWEESEKSKAENKAEKKIADVHAWENSKKAAVEAQLKKIEEQL 151

Query: 131 EKKKAEYGELMKNKIVGIHKQGEEKKATIEAERREQCLKVEETAAKYRASGFTPKA 187
           EKKKAEY E MKNK+  IHK+ EE++A IEA+R E  LK EETAAKYRA+G  PKA
Sbjct: 152 EKKKAEYAERMKNKVAAIHKEAEERRAMIEAKRGEDVLKAEETAAKYRATGIVPKA 207

[Close]

BLAST of Cp4.1LG00g04720 vs. ExPASy Swiss-Prot
Match: P93758 (Remorin 4.2 OS=Arabidopsis thaliana OX=3702 GN=REM4.2 PE=1 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 2.3e-06
Identity = 36/109 (33.03%), Postives = 60/109 (55.05%), Query Frame = 0


Query: 76  RVELEKKLALIKAWEESEKIKAENRAYKRLSAIDSWENTKKASIQAQLMKLEEKMEKKKA 135
           RV+ E+  A I AW+ ++  K  NR  +  + I+ W N +     + + K+E K+E++KA
Sbjct: 157 RVKREEVEAKITAWQTAKLAKINNRFKREDAVINGWFNEQVNKANSWMKKIERKLEERKA 216

Query: 136 EYGELMKNKIVGIHKQGEEKKATIEAERREQCLKVEETAAKYRASGFTP 185
           +  E  +N +    ++ EE++AT EA+R  +  KV E A   RA G  P
Sbjct: 217 KAMEKTQNNVAKAQRKAEERRATAEAKRGTEVAKVVEVANLMRALGRPP 265

[Close]

BLAST of Cp4.1LG00g04720 vs. NCBI nr
Match: XP_023521230.1 (remorin-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 263 bits (671), Expect = 7.66e-87
Identity = 152/194 (78.35%), Postives = 155/194 (79.90%), Query Frame = 0


Query: 1   MGGADESEPDSQPPVPLQNNSLIPHVADFLSNKDKINDSGFSSSFRQTCSSKGQRKRNKE 60
           MGGADESEPDSQPPVPLQNNSLIPH      + DK+               K +      
Sbjct: 1   MGGADESEPDSQPPVPLQNNSLIPHAVS-APHSDKL------------VPPKDR------ 60

Query: 61  IVIERGFVILDVALARVELEKKLALIKAWEESEKIKAENRAYKRLSAIDSWENTKKASIQ 120
                     DVALARVELEKKLALIKAWEESEKIKAENRAYKRLSAIDSWENTKKASIQ
Sbjct: 61  ----------DVALARVELEKKLALIKAWEESEKIKAENRAYKRLSAIDSWENTKKASIQ 120

Query: 121 AQLMKLEEKMEKKKAEYGELMKNKIVGIHKQGEEKKATIEAERREQCLKVEETAAKYRAS 180
           AQLMKLEEKMEKKKAEYGELMKNKIVGIHKQGEEKKATIEAERREQCLKVEETAAKYRAS
Sbjct: 121 AQLMKLEEKMEKKKAEYGELMKNKIVGIHKQGEEKKATIEAERREQCLKVEETAAKYRAS 165

Query: 181 GFTPKALLLKCFSG 194
           GFTPKALLLKCFSG
Sbjct: 181 GFTPKALLLKCFSG 165

[Close]

BLAST of Cp4.1LG00g04720 vs. NCBI nr
Match: XP_023521232.1 (remorin-like isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 262 bits (670), Expect = 9.82e-87
Identity = 152/194 (78.35%), Postives = 155/194 (79.90%), Query Frame = 0


Query: 1   MGGADESEPDSQPPVPLQNNSLIPHVADFLSNKDKINDSGFSSSFRQTCSSKGQRKRNKE 60
           MGGADESEPDSQPPVPLQNNSLIPH      + DK+               K +      
Sbjct: 1   MGGADESEPDSQPPVPLQNNSLIPHAP----HSDKL------------VPPKDR------ 60

Query: 61  IVIERGFVILDVALARVELEKKLALIKAWEESEKIKAENRAYKRLSAIDSWENTKKASIQ 120
                     DVALARVELEKKLALIKAWEESEKIKAENRAYKRLSAIDSWENTKKASIQ
Sbjct: 61  ----------DVALARVELEKKLALIKAWEESEKIKAENRAYKRLSAIDSWENTKKASIQ 120

Query: 121 AQLMKLEEKMEKKKAEYGELMKNKIVGIHKQGEEKKATIEAERREQCLKVEETAAKYRAS 180
           AQLMKLEEKMEKKKAEYGELMKNKIVGIHKQGEEKKATIEAERREQCLKVEETAAKYRAS
Sbjct: 121 AQLMKLEEKMEKKKAEYGELMKNKIVGIHKQGEEKKATIEAERREQCLKVEETAAKYRAS 162

Query: 181 GFTPKALLLKCFSG 194
           GFTPKALLLKCFSG
Sbjct: 181 GFTPKALLLKCFSG 162

[Close]

BLAST of Cp4.1LG00g04720 vs. NCBI nr
Match: XP_023532544.1 (remorin-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 260 bits (664), Expect = 8.91e-86
Identity = 151/194 (77.84%), Postives = 154/194 (79.38%), Query Frame = 0


Query: 1   MGGADESEPDSQPPVPLQNNSLIPHVADFLSNKDKINDSGFSSSFRQTCSSKGQRKRNKE 60
           MGGADESEPDSQPPVPLQNNSLIPH      + DK+               K +      
Sbjct: 1   MGGADESEPDSQPPVPLQNNSLIPHAVS-APHSDKL------------VPPKDR------ 60

Query: 61  IVIERGFVILDVALARVELEKKLALIKAWEESEKIKAENRAYKRLSAIDSWENTKKASIQ 120
                     DVALARVELEKKLALIKAWEESEKIKAENRAYKRLSAIDSWENTKKASIQ
Sbjct: 61  ----------DVALARVELEKKLALIKAWEESEKIKAENRAYKRLSAIDSWENTKKASIQ 120

Query: 121 AQLMKLEEKMEKKKAEYGELMKNKIVGIHKQGEEKKATIEAERREQCLKVEETAAKYRAS 180
           AQLMKLEEKMEKKKAEYGELMKNKIVGIHKQGEEKKATI AERREQCLKVEETAAKYRAS
Sbjct: 121 AQLMKLEEKMEKKKAEYGELMKNKIVGIHKQGEEKKATIVAERREQCLKVEETAAKYRAS 165

Query: 181 GFTPKALLLKCFSG 194
           GFTPKALLLKCFSG
Sbjct: 181 GFTPKALLLKCFSG 165

[Close]

BLAST of Cp4.1LG00g04720 vs. NCBI nr
Match: XP_023532546.1 (remorin-like isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 259 bits (663), Expect = 1.14e-85
Identity = 151/194 (77.84%), Postives = 154/194 (79.38%), Query Frame = 0


Query: 1   MGGADESEPDSQPPVPLQNNSLIPHVADFLSNKDKINDSGFSSSFRQTCSSKGQRKRNKE 60
           MGGADESEPDSQPPVPLQNNSLIPH      + DK+               K +      
Sbjct: 1   MGGADESEPDSQPPVPLQNNSLIPHAP----HSDKL------------VPPKDR------ 60

Query: 61  IVIERGFVILDVALARVELEKKLALIKAWEESEKIKAENRAYKRLSAIDSWENTKKASIQ 120
                     DVALARVELEKKLALIKAWEESEKIKAENRAYKRLSAIDSWENTKKASIQ
Sbjct: 61  ----------DVALARVELEKKLALIKAWEESEKIKAENRAYKRLSAIDSWENTKKASIQ 120

Query: 121 AQLMKLEEKMEKKKAEYGELMKNKIVGIHKQGEEKKATIEAERREQCLKVEETAAKYRAS 180
           AQLMKLEEKMEKKKAEYGELMKNKIVGIHKQGEEKKATI AERREQCLKVEETAAKYRAS
Sbjct: 121 AQLMKLEEKMEKKKAEYGELMKNKIVGIHKQGEEKKATIVAERREQCLKVEETAAKYRAS 162

Query: 181 GFTPKALLLKCFSG 194
           GFTPKALLLKCFSG
Sbjct: 181 GFTPKALLLKCFSG 162

[Close]

BLAST of Cp4.1LG00g04720 vs. NCBI nr
Match: XP_023521231.1 (remorin-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 256 bits (655), Expect = 2.02e-84
Identity = 151/194 (77.84%), Postives = 154/194 (79.38%), Query Frame = 0


Query: 1   MGGADESEPDSQPPVPLQNNSLIPHVADFLSNKDKINDSGFSSSFRQTCSSKGQRKRNKE 60
           MGGADESEPDSQPPVPLQNNSLIPH      + DK+               K +      
Sbjct: 1   MGGADESEPDSQPPVPLQNNSLIPHAVS-APHSDKL------------VPPKDR------ 60

Query: 61  IVIERGFVILDVALARVELEKKLALIKAWEESEKIKAENRAYKRLSAIDSWENTKKASIQ 120
                     DVALARVELEKKLALIKAWEESEKIKAENRAYKRLSAIDSWENTKKASIQ
Sbjct: 61  ----------DVALARVELEKKLALIKAWEESEKIKAENRAYKRLSAIDSWENTKKASIQ 120

Query: 121 AQLMKLEEKMEKKKAEYGELMKNKIVGIHKQGEEKKATIEAERREQCLKVEETAAKYRAS 180
           AQLMKLE KMEKKKAEYGELMKNKIVGIHKQGEEKKATIEAERREQCLKVEETAAKYRAS
Sbjct: 121 AQLMKLE-KMEKKKAEYGELMKNKIVGIHKQGEEKKATIEAERREQCLKVEETAAKYRAS 164

Query: 181 GFTPKALLLKCFSG 194
           GFTPKALLLKCFSG
Sbjct: 181 GFTPKALLLKCFSG 164

[Close]

BLAST of Cp4.1LG00g04720 vs. ExPASy TrEMBL
Match: A0A6J1K4F4 (remorin-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111491593 PE=3 SV=1)

HSP 1 Score: 255 bits (652), Expect = 2.62e-84
Identity = 148/194 (76.29%), Postives = 152/194 (78.35%), Query Frame = 0


Query: 1   MGGADESEPDSQPPVPLQNNSLIPHVADFLSNKDKINDSGFSSSFRQTCSSKGQRKRNKE 60
           MGGADESEPDSQP VPLQNNSLIPH                        S K    ++K 
Sbjct: 1   MGGADESEPDSQPSVPLQNNSLIPHTPP---------------------SDKLVPPKDK- 60

Query: 61  IVIERGFVILDVALARVELEKKLALIKAWEESEKIKAENRAYKRLSAIDSWENTKKASIQ 120
                     DVALARVELEKKLALIKAWEESEKIKAENRAYKRLSAIDSWENT+KASIQ
Sbjct: 61  ----------DVALARVELEKKLALIKAWEESEKIKAENRAYKRLSAIDSWENTRKASIQ 120

Query: 121 AQLMKLEEKMEKKKAEYGELMKNKIVGIHKQGEEKKATIEAERREQCLKVEETAAKYRAS 180
           AQLMKLEEKMEKKKAEYGELMKNKIVGIHKQGEEKKATIEAERREQCLKVEETAAKYRAS
Sbjct: 121 AQLMKLEEKMEKKKAEYGELMKNKIVGIHKQGEEKKATIEAERREQCLKVEETAAKYRAS 162

Query: 181 GFTPKALLLKCFSG 194
           GFTPK LLL+CFSG
Sbjct: 181 GFTPKTLLLRCFSG 162

[Close]

BLAST of Cp4.1LG00g04720 vs. ExPASy TrEMBL
Match: A0A6J1K8E5 (remorin-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111491593 PE=3 SV=1)

HSP 1 Score: 255 bits (652), Expect = 2.90e-84
Identity = 148/194 (76.29%), Postives = 152/194 (78.35%), Query Frame = 0


Query: 1   MGGADESEPDSQPPVPLQNNSLIPHVADFLSNKDKINDSGFSSSFRQTCSSKGQRKRNKE 60
           MGGADESEPDSQP VPLQNNSLIPH                        S K    ++K 
Sbjct: 1   MGGADESEPDSQPSVPLQNNSLIPHTVS------------------APPSDKLVPPKDK- 60

Query: 61  IVIERGFVILDVALARVELEKKLALIKAWEESEKIKAENRAYKRLSAIDSWENTKKASIQ 120
                     DVALARVELEKKLALIKAWEESEKIKAENRAYKRLSAIDSWENT+KASIQ
Sbjct: 61  ----------DVALARVELEKKLALIKAWEESEKIKAENRAYKRLSAIDSWENTRKASIQ 120

Query: 121 AQLMKLEEKMEKKKAEYGELMKNKIVGIHKQGEEKKATIEAERREQCLKVEETAAKYRAS 180
           AQLMKLEEKMEKKKAEYGELMKNKIVGIHKQGEEKKATIEAERREQCLKVEETAAKYRAS
Sbjct: 121 AQLMKLEEKMEKKKAEYGELMKNKIVGIHKQGEEKKATIEAERREQCLKVEETAAKYRAS 165

Query: 181 GFTPKALLLKCFSG 194
           GFTPK LLL+CFSG
Sbjct: 181 GFTPKTLLLRCFSG 165

[Close]

BLAST of Cp4.1LG00g04720 vs. ExPASy TrEMBL
Match: A0A6J1H2D2 (remorin-like OS=Cucurbita moschata OX=3662 GN=LOC111459402 PE=3 SV=1)

HSP 1 Score: 253 bits (645), Expect = 3.26e-83
Identity = 148/194 (76.29%), Postives = 153/194 (78.87%), Query Frame = 0


Query: 1   MGGADESEPDSQPPVPLQNNSLIPHVADFLSNKDKINDSGFSSSFRQTCSSKGQRKRNKE 60
           MGGADESEPDSQPPVPLQNNSLIPH      + DK+               K +      
Sbjct: 1   MGGADESEPDSQPPVPLQNNSLIPHAVS-APHSDKL------------VPPKDR------ 60

Query: 61  IVIERGFVILDVALARVELEKKLALIKAWEESEKIKAENRAYKRLSAIDSWENTKKASIQ 120
                     DVALARVELEKKLALIKAWEESEKIKAENRAYKRLSAIDSWENTKKASIQ
Sbjct: 61  ----------DVALARVELEKKLALIKAWEESEKIKAENRAYKRLSAIDSWENTKKASIQ 120

Query: 121 AQLMKLEEKMEKKKAEYGELMKNKIVGIHKQGEEKKATIEAERREQCLKVEETAAKYRAS 180
           AQLMKLEEKMEKKKAEYGELMKN+IVGIHKQGEEKKATIEAERREQCLKVEETAAKYRAS
Sbjct: 121 AQLMKLEEKMEKKKAEYGELMKNRIVGIHKQGEEKKATIEAERREQCLKVEETAAKYRAS 164

Query: 181 GFTPKALLLKCFSG 194
           GFTPK LL +CFSG
Sbjct: 181 GFTPKTLL-RCFSG 164

[Close]

BLAST of Cp4.1LG00g04720 vs. ExPASy TrEMBL
Match: A0A6J1K6G7 (remorin-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111491593 PE=3 SV=1)

HSP 1 Score: 249 bits (636), Expect = 7.64e-82
Identity = 147/194 (75.77%), Postives = 151/194 (77.84%), Query Frame = 0


Query: 1   MGGADESEPDSQPPVPLQNNSLIPHVADFLSNKDKINDSGFSSSFRQTCSSKGQRKRNKE 60
           MGGADESEPDSQP VPLQNNSLIPH                        S K    ++K 
Sbjct: 1   MGGADESEPDSQPSVPLQNNSLIPHTVS------------------APPSDKLVPPKDK- 60

Query: 61  IVIERGFVILDVALARVELEKKLALIKAWEESEKIKAENRAYKRLSAIDSWENTKKASIQ 120
                     DVALARVELEKKLALIKAWEESEKIKAENRAYKRLSAIDSWENT+KASIQ
Sbjct: 61  ----------DVALARVELEKKLALIKAWEESEKIKAENRAYKRLSAIDSWENTRKASIQ 120

Query: 121 AQLMKLEEKMEKKKAEYGELMKNKIVGIHKQGEEKKATIEAERREQCLKVEETAAKYRAS 180
           AQLMKLE KMEKKKAEYGELMKNKIVGIHKQGEEKKATIEAERREQCLKVEETAAKYRAS
Sbjct: 121 AQLMKLE-KMEKKKAEYGELMKNKIVGIHKQGEEKKATIEAERREQCLKVEETAAKYRAS 164

Query: 181 GFTPKALLLKCFSG 194
           GFTPK LLL+CFSG
Sbjct: 181 GFTPKTLLLRCFSG 164

[Close]

BLAST of Cp4.1LG00g04720 vs. ExPASy TrEMBL
Match: A0A1S3AU46 (remorin isoform X1 OS=Cucumis melo OX=3656 GN=LOC103482726 PE=3 SV=1)

HSP 1 Score: 206 bits (523), Expect = 7.89e-64
Identity = 122/191 (63.87%), Postives = 140/191 (73.30%), Query Frame = 0


Query: 4   ADESEPDSQPPVPLQNNSLIPHVADFLSNKDKINDSGFSSSFRQTCSSKGQRKRNKEIVI 63
           AD+SEPD  PP     +  +PH        DKI+DS          + K    +++    
Sbjct: 62  ADDSEPDQPPPQNDVASISLPHT-------DKISDS----------AEKVDAAKDR---- 121

Query: 64  ERGFVILDVALARVELEKKLALIKAWEESEKIKAENRAYKRLSAIDSWENTKKASIQAQL 123
                  D+ALARVE EKK+ALIKAWEESEKIKAEN+AYKRLSA++SWENT+KASI+AQL
Sbjct: 122 -------DIALARVEWEKKMALIKAWEESEKIKAENKAYKRLSAVESWENTRKASIEAQL 181

Query: 124 MKLEEKMEKKKAEYGELMKNKIVGIHKQGEEKKATIEAERREQCLKVEETAAKYRASGFT 183
           MK+EEKMEKKKAEY E MKNKIVGIHK+GEEKKATIEAER+EQCLKVEETA KYR SGF 
Sbjct: 182 MKIEEKMEKKKAEYAEQMKNKIVGIHKEGEEKKATIEAERKEQCLKVEETAEKYRTSGFI 223

Query: 184 PKALLLKCFSG 194
           PK LL KCFSG
Sbjct: 242 PKTLL-KCFSG 223

[Close]

BLAST of Cp4.1LG00g04720 vs. TAIR 10
Match: AT5G23750.1 (Remorin family protein )

HSP 1 Score: 145.6 bits (366), Expect = 4.2e-35
Identity = 81/131 (61.83%), Postives = 102/131 (77.86%), Query Frame = 0


Query: 59  KEIVIER--GFVILDVALARVELEKKLALIKAWEESEKIKAENRAYKRLSAIDSWENTKK 118
           KE+  E+  G V  D  LARVE EK+++LIKAWEE+EK K EN+A K+LS+I SWEN KK
Sbjct: 68  KEVEEEKKEGSVNRDAVLARVETEKRMSLIKAWEEAEKCKVENKAEKKLSSIGSWENNKK 127

Query: 119 ASIQAQLMKLEEKMEKKKAEYGELMKNKIVGIHKQGEEKKATIEAERREQCLKVEETAAK 178
           A+++A+L K+EE++EKKKAEY E MKNKI  IHK+ EEK+A IEA+R E+ LK EE AAK
Sbjct: 128 AAVEAELKKMEEQLEKKKAEYVEQMKNKIAQIHKEAEEKRAMIEAKRGEEILKAEELAAK 187

Query: 179 YRASGFTPKAL 188
           YRA+G  PK L
Sbjct: 188 YRATGTAPKKL 198

[Close]

BLAST of Cp4.1LG00g04720 vs. TAIR 10
Match: AT5G23750.2 (Remorin family protein )

HSP 1 Score: 145.2 bits (365), Expect = 5.5e-35
Identity = 78/124 (62.90%), Postives = 98/124 (79.03%), Query Frame = 0


Query: 64  ERGFVILDVALARVELEKKLALIKAWEESEKIKAENRAYKRLSAIDSWENTKKASIQAQL 123
           + G V  D  LARVE EK+++LIKAWEE+EK K EN+A K+LS+I SWEN KKA+++A+L
Sbjct: 74  KEGSVNRDAVLARVETEKRMSLIKAWEEAEKCKVENKAEKKLSSIGSWENNKKAAVEAEL 133

Query: 124 MKLEEKMEKKKAEYGELMKNKIVGIHKQGEEKKATIEAERREQCLKVEETAAKYRASGFT 183
            K+EE++EKKKAEY E MKNKI  IHK+ EEK+A IEA+R E+ LK EE AAKYRA+G  
Sbjct: 134 KKMEEQLEKKKAEYVEQMKNKIAQIHKEAEEKRAMIEAKRGEEILKAEELAAKYRATGTA 193

Query: 184 PKAL 188
           PK L
Sbjct: 194 PKKL 197

[Close]

BLAST of Cp4.1LG00g04720 vs. TAIR 10
Match: AT2G45820.1 (Remorin family protein )

HSP 1 Score: 141.7 bits (356), Expect = 6.0e-34
Identity = 73/116 (62.93%), Postives = 93/116 (80.17%), Query Frame = 0


Query: 71  DVALARVELEKKLALIKAWEESEKIKAENRAYKRLSAIDSWENTKKASIQAQLMKLEEKM 130
           DV LA +E EKK + IKAWEESEK KAENRA K++S + +WEN+KKA+++AQL K+EEK+
Sbjct: 70  DVILADLEKEKKTSFIKAWEESEKSKAENRAQKKISDVHAWENSKKAAVEAQLRKIEEKL 129

Query: 131 EKKKAEYGELMKNKIVGIHKQGEEKKATIEAERREQCLKVEETAAKYRASGFTPKA 187
           EKKKA+YGE MKNK+  IHK  EEK+A +EA++ E+ LK EE  AKYRA+G  PKA
Sbjct: 130 EKKKAQYGEKMKNKVAAIHKLAEEKRAMVEAKKGEELLKAEEMGAKYRATGVVPKA 185

[Close]

BLAST of Cp4.1LG00g04720 vs. TAIR 10
Match: AT3G61260.1 (Remorin family protein )

HSP 1 Score: 139.0 bits (349), Expect = 3.9e-33
Identity = 70/116 (60.34%), Postives = 94/116 (81.03%), Query Frame = 0


Query: 71  DVALARVELEKKLALIKAWEESEKIKAENRAYKRLSAIDSWENTKKASIQAQLMKLEEKM 130
           DV LA +  EK+L+ ++AWEESEK KAEN+A K+++ + +WEN+KKA+++AQL K+EE++
Sbjct: 92  DVKLADLSKEKRLSFVRAWEESEKSKAENKAEKKIADVHAWENSKKAAVEAQLKKIEEQL 151

Query: 131 EKKKAEYGELMKNKIVGIHKQGEEKKATIEAERREQCLKVEETAAKYRASGFTPKA 187
           EKKKAEY E MKNK+  IHK+ EE++A IEA+R E  LK EETAAKYRA+G  PKA
Sbjct: 152 EKKKAEYAERMKNKVAAIHKEAEERRAMIEAKRGEDVLKAEETAAKYRATGIVPKA 207

[Close]

BLAST of Cp4.1LG00g04720 vs. TAIR 10
Match: AT3G48940.1 (Remorin family protein )

HSP 1 Score: 131.7 bits (330), Expect = 6.2e-31
Identity = 69/122 (56.56%), Postives = 92/122 (75.41%), Query Frame = 0


Query: 66  GFVILDVALARVELEKKLALIKAWEESEKIKAENRAYKRLSAIDSWENTKKASIQAQLMK 125
           G V  D  L R+E +K+++LIKAWEE+EK K EN+A K++S++ +WEN+KKAS++A+L K
Sbjct: 50  GSVHRDAVLVRLEQDKRISLIKAWEEAEKSKVENKAQKKISSVGAWENSKKASVEAELKK 109

Query: 126 LEEKMEKKKAEYGELMKNKIVGIHKQGEEKKATIEAERREQCLKVEETAAKYRASGFTPK 185
           +EE++ KKKA Y E MKNKI  IHK+ EEK+A  EA+R E  LK EE AAKYRA+G  P 
Sbjct: 110 IEEQLNKKKAHYTEQMKNKIAQIHKEAEEKRAMTEAKRGEDVLKAEEMAAKYRATGTAPT 169

Query: 186 AL 188
            L
Sbjct: 170 KL 171

The following BLAST results are available for this feature:

BLAST of Cp4.1LG00g04720 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FFA5	5.9e-34	61.83	Remorin 1.4 OS=Arabidopsis thaliana OX=3702 GN=REM1.4 PE=1 SV=1	[more]
P93788	5.0e-33	60.80	Remorin OS=Solanum tuberosum OX=4113 PE=1 SV=1	[more]
O80837	8.5e-33	62.93	Remorin OS=Arabidopsis thaliana OX=3702 GN=DBP PE=1 SV=1	[more]
Q9M2D8	5.5e-32	60.34	Uncharacterized protein At3g61260 OS=Arabidopsis thaliana OX=3702 GN=At3g61260 P...	[more]
P93758	2.3e-06	33.03	Remorin 4.2 OS=Arabidopsis thaliana OX=3702 GN=REM4.2 PE=1 SV=1	[more]

BLAST of Cp4.1LG00g04720 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023521230.1	7.66e-87	78.35	remorin-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_023521232.1	9.82e-87	78.35	remorin-like isoform X3 [Cucurbita pepo subsp. pepo]	[more]
XP_023532544.1	8.91e-86	77.84	remorin-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_023532546.1	1.14e-85	77.84	remorin-like isoform X3 [Cucurbita pepo subsp. pepo]	[more]
XP_023521231.1	2.02e-84	77.84	remorin-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cp4.1LG00g04720 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1K4F4	2.62e-84	76.29	remorin-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111491593 PE=3 SV=1	[more]
A0A6J1K8E5	2.90e-84	76.29	remorin-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111491593 PE=3 SV=1	[more]
A0A6J1H2D2	3.26e-83	76.29	remorin-like OS=Cucurbita moschata OX=3662 GN=LOC111459402 PE=3 SV=1	[more]
A0A6J1K6G7	7.64e-82	75.77	remorin-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111491593 PE=3 SV=1	[more]
A0A1S3AU46	7.89e-64	63.87	remorin isoform X1 OS=Cucumis melo OX=3656 GN=LOC103482726 PE=3 SV=1	[more]

BLAST of Cp4.1LG00g04720 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G23750.1	4.2e-35	61.83	Remorin family protein	[more]
AT5G23750.2	5.5e-35	62.90	Remorin family protein	[more]
AT2G45820.1	6.0e-34	62.93	Remorin family protein	[more]
AT3G61260.1	3.9e-33	60.34	Remorin family protein	[more]
AT3G48940.1	6.2e-31	56.56	Remorin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 116..143
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	PANTHER	PTHR31775	OS02G0117200 PROTEIN	coord: 12..193
None	No IPR available	PANTHER	PTHR31775:SF5	REMORIN 1.4	coord: 12..193
IPR005516	Remorin, C-terminal	PFAM	PF03763	Remorin_C	coord: 81..185 e-value: 4.3E-28 score: 97.3

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG00g04720.1	Cp4.1LG00g04720.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010033	response to organic substance
biological_process	GO:1901700	response to oxygen-containing compound
biological_process	GO:0006950	response to stress
cellular_component	GO:0016020	membrane