Cp4.1LG00g04170 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG00g04170
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Senescence-associated protein
Location	Cp4.1LG00: 15750202 .. 15750875 (-)
RNA-Seq Expression	Cp4.1LG00g04170
Synteny	Cp4.1LG00g04170

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGCTGTACAAGCAGAAGAAGAACCAGAATGTTAAGGGCAATAGGCTGTTGATCAGCATCAATGTGCTCGGCAGCGCTGGTCCGATTCGATTTATTGTAAGCGAGGAGCAACTTGTTGCTGATGTTATTGATACCGCGTTGAAATCCTACGCGCGTGAGGGCCGGCTCCCAATTCTTGGCTCTGATCTTCACGATTTCCAGCTTTATTGTCCGAGTGCTGGACCAGATGGTAATTCTAATTTTATATTTTGTTCTCAATTCATTTGTGTTAATTCGTTGCAATTTTCCTCTACAATCGTGTTGCATGTTTCTAATCTGAAAGGATGGAGAAAAATTAGATGTTATTCGGTATTTATCTCATTTTGTGATGGGGTTCTCTGTTTTGGGATGTTTGGATTCTCTGTTGTTCGGTCTTTTGAATCCTCTGATAAAAAAAAAATTCTGGGTTGTAGTTTCTCATGTTGTATGGGTTTTTTTGTGCAGCCTTGAGTCCATGGGACACAATTGGATCGCACGGAGCTCGAAACTTCACGTTGTGCAAGAAACCACAGGCAGAGAAAGTGGGAGAAGATGGAAAAGCAGCATCACGGCCAGCCATCCATCGCAAAGCCTCAGGGAGCTGGAAGTCATGGATCAACAAGTCTCTGAATATGAAAATCTATTCCCATTGA

mRNA sequence

ATGTTGCTGTACAAGCAGAAGAAGAACCAGAATGTTAAGGGCAATAGGCTGTTGATCAGCATCAATGTGCTCGGCAGCGCTGGTCCGATTCGATTTATTGTAAGCGAGGAGCAACTTGTTGCTGATGTTATTGATACCGCGTTGAAATCCTACGCGCGTGAGGGCCGGCTCCCAATTCTTGGCTCTGATCTTCACGATTTCCAGCTTTATTGTCCGAGTGCTGGACCAGATGCCTTGAGTCCATGGGACACAATTGGATCGCACGGAGCTCGAAACTTCACGTTGTGCAAGAAACCACAGGCAGAGAAAGTGGGAGAAGATGGAAAAGCAGCATCACGGCCAGCCATCCATCGCAAAGCCTCAGGGAGCTGGAAGTCATGGATCAACAAGTCTCTGAATATGAAAATCTATTCCCATTGA

Coding sequence (CDS)

ATGTTGCTGTACAAGCAGAAGAAGAACCAGAATGTTAAGGGCAATAGGCTGTTGATCAGCATCAATGTGCTCGGCAGCGCTGGTCCGATTCGATTTATTGTAAGCGAGGAGCAACTTGTTGCTGATGTTATTGATACCGCGTTGAAATCCTACGCGCGTGAGGGCCGGCTCCCAATTCTTGGCTCTGATCTTCACGATTTCCAGCTTTATTGTCCGAGTGCTGGACCAGATGCCTTGAGTCCATGGGACACAATTGGATCGCACGGAGCTCGAAACTTCACGTTGTGCAAGAAACCACAGGCAGAGAAAGTGGGAGAAGATGGAAAAGCAGCATCACGGCCAGCCATCCATCGCAAAGCCTCAGGGAGCTGGAAGTCATGGATCAACAAGTCTCTGAATATGAAAATCTATTCCCATTGA

Protein sequence

MLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLPILGSDLHDFQLYCPSAGPDALSPWDTIGSHGARNFTLCKKPQAEKVGEDGKAASRPAIHRKASGSWKSWINKSLNMKIYSH

Homology

[Close]

BLAST of Cp4.1LG00g04170 vs. ExPASy Swiss-Prot
Match: Q56XJ7 (Uncharacterized protein At4g22758 OS=Arabidopsis thaliana OX=3702 GN=At4g22758 PE=2 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 9.2e-05
Identity = 31/93 (33.33%), Postives = 47/93 (50.54%), Query Frame = 0


Query: 11  NVKGN-----RLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLPILGSDLH 70
           N +GN     +++IS+ V GS GP+R +V     V + I   +  Y +EGR P L  D  
Sbjct: 113 NQEGNTKEAPKVIISVAVEGSPGPVRAMVKLSCNVEETIKIVVDKYCKEGRTPKLDRD-S 172

Query: 71  DFQLYCPSAGPDALSPWDTIGSHGARNFTLCKK 99
            F+L+        L   + IG  G+R+F + KK
Sbjct: 173 AFELHQSHFSIQCLEKREIIGELGSRSFYMRKK 204

[Close]

BLAST of Cp4.1LG00g04170 vs. NCBI nr
Match: XP_023521148.1 (uncharacterized protein At4g22758-like [Cucurbita pepo subsp. pepo] >XP_023521149.1 uncharacterized protein At4g22758-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 286 bits (731), Expect = 2.66e-97
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 1   MLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLPIL 60
           MLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLPIL
Sbjct: 3   MLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLPIL 62

Query: 61  GSDLHDFQLYCPSAGPDALSPWDTIGSHGARNFTLCKKPQAEKVGEDGKAASRPAIHRKA 120
           GSDLHDFQLYCPSAGPDALSPWDTIGSHGARNFTLCKKPQAEKVGEDGKAASRPAIHRKA
Sbjct: 63  GSDLHDFQLYCPSAGPDALSPWDTIGSHGARNFTLCKKPQAEKVGEDGKAASRPAIHRKA 122

Query: 121 SGSWKSWINKSLNMKIYSH 139
           SGSWKSWINKSLNMKIYSH
Sbjct: 123 SGSWKSWINKSLNMKIYSH 141

[Close]

BLAST of Cp4.1LG00g04170 vs. NCBI nr
Match: XP_022959923.1 (uncharacterized protein At4g22758-like [Cucurbita moschata])

HSP 1 Score: 284 bits (727), Expect = 1.08e-96
Identity = 138/139 (99.28%), Postives = 138/139 (99.28%), Query Frame = 0


Query: 1   MLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLPIL 60
           MLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLPIL
Sbjct: 3   MLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLPIL 62

Query: 61  GSDLHDFQLYCPSAGPDALSPWDTIGSHGARNFTLCKKPQAEKVGEDGKAASRPAIHRKA 120
           GSDLHDFQLYCPSAGPDALSPWDTIGSHGARNFTLCKKPQAEK GEDGKAASRPAIHRKA
Sbjct: 63  GSDLHDFQLYCPSAGPDALSPWDTIGSHGARNFTLCKKPQAEKAGEDGKAASRPAIHRKA 122

Query: 121 SGSWKSWINKSLNMKIYSH 139
           SGSWKSWINKSLNMKIYSH
Sbjct: 123 SGSWKSWINKSLNMKIYSH 141

[Close]

BLAST of Cp4.1LG00g04170 vs. NCBI nr
Match: XP_022990881.1 (uncharacterized protein At4g22758 [Cucurbita maxima])

HSP 1 Score: 283 bits (724), Expect = 3.10e-96
Identity = 138/139 (99.28%), Postives = 138/139 (99.28%), Query Frame = 0


Query: 1   MLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLPIL 60
           MLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLPIL
Sbjct: 3   MLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLPIL 62

Query: 61  GSDLHDFQLYCPSAGPDALSPWDTIGSHGARNFTLCKKPQAEKVGEDGKAASRPAIHRKA 120
           GSDLH FQLYCPSAGPDALSPWDTIGSHGARNFTLCKKPQAEKVGEDGKAASRPAIHRKA
Sbjct: 63  GSDLHHFQLYCPSAGPDALSPWDTIGSHGARNFTLCKKPQAEKVGEDGKAASRPAIHRKA 122

Query: 121 SGSWKSWINKSLNMKIYSH 139
           SGSWKSWINKSLNMKIYSH
Sbjct: 123 SGSWKSWINKSLNMKIYSH 141

[Close]

BLAST of Cp4.1LG00g04170 vs. NCBI nr
Match: KAG7032577.1 (hypothetical protein SDJN02_06626, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 284 bits (727), Expect = 5.06e-96
Identity = 138/139 (99.28%), Postives = 138/139 (99.28%), Query Frame = 0


Query: 1   MLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLPIL 60
           MLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLPIL
Sbjct: 48  MLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLPIL 107

Query: 61  GSDLHDFQLYCPSAGPDALSPWDTIGSHGARNFTLCKKPQAEKVGEDGKAASRPAIHRKA 120
           GSDLHDFQLYCPSAGPDALSPWDTIGSHGARNFTLCKKPQAEK GEDGKAASRPAIHRKA
Sbjct: 108 GSDLHDFQLYCPSAGPDALSPWDTIGSHGARNFTLCKKPQAEKAGEDGKAASRPAIHRKA 167

Query: 121 SGSWKSWINKSLNMKIYSH 139
           SGSWKSWINKSLNMKIYSH
Sbjct: 168 SGSWKSWINKSLNMKIYSH 186

[Close]

BLAST of Cp4.1LG00g04170 vs. NCBI nr
Match: XP_023540757.1 (uncharacterized protein At4g22758-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 273 bits (697), Expect = 8.92e-92
Identity = 139/162 (85.80%), Postives = 139/162 (85.80%), Query Frame = 0


Query: 1   MLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLPIL 60
           MLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLPIL
Sbjct: 3   MLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLPIL 62

Query: 61  GSDLHDFQLYCPSAGPDALSPWDTIGSHGARNFTLCKK---------------------- 120
           GSDLHDFQLYCPSAGPDALSPWDTIGSHGARNFTLCKK                      
Sbjct: 63  GSDLHDFQLYCPSAGPDALSPWDTIGSHGARNFTLCKKXGSLSPWDTIGSHGARNFTLCK 122

Query: 121 -PQAEKVGEDGKAASRPAIHRKASGSWKSWINKSLNMKIYSH 139
            PQAEKVGEDGKAASRPAIHRKASGSWKSWINKSLNMKIYSH
Sbjct: 123 KPQAEKVGEDGKAASRPAIHRKASGSWKSWINKSLNMKIYSH 164

[Close]

BLAST of Cp4.1LG00g04170 vs. ExPASy TrEMBL
Match: A0A6J1H7B9 (uncharacterized protein At4g22758-like OS=Cucurbita moschata OX=3662 GN=LOC111460829 PE=4 SV=1)

HSP 1 Score: 284 bits (727), Expect = 5.24e-97
Identity = 138/139 (99.28%), Postives = 138/139 (99.28%), Query Frame = 0


Query: 1   MLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLPIL 60
           MLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLPIL
Sbjct: 3   MLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLPIL 62

Query: 61  GSDLHDFQLYCPSAGPDALSPWDTIGSHGARNFTLCKKPQAEKVGEDGKAASRPAIHRKA 120
           GSDLHDFQLYCPSAGPDALSPWDTIGSHGARNFTLCKKPQAEK GEDGKAASRPAIHRKA
Sbjct: 63  GSDLHDFQLYCPSAGPDALSPWDTIGSHGARNFTLCKKPQAEKAGEDGKAASRPAIHRKA 122

Query: 121 SGSWKSWINKSLNMKIYSH 139
           SGSWKSWINKSLNMKIYSH
Sbjct: 123 SGSWKSWINKSLNMKIYSH 141

[Close]

BLAST of Cp4.1LG00g04170 vs. ExPASy TrEMBL
Match: A0A6J1JP66 (uncharacterized protein At4g22758 OS=Cucurbita maxima OX=3661 GN=LOC111487636 PE=4 SV=1)

HSP 1 Score: 283 bits (724), Expect = 1.50e-96
Identity = 138/139 (99.28%), Postives = 138/139 (99.28%), Query Frame = 0


Query: 1   MLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLPIL 60
           MLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLPIL
Sbjct: 3   MLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLPIL 62

Query: 61  GSDLHDFQLYCPSAGPDALSPWDTIGSHGARNFTLCKKPQAEKVGEDGKAASRPAIHRKA 120
           GSDLH FQLYCPSAGPDALSPWDTIGSHGARNFTLCKKPQAEKVGEDGKAASRPAIHRKA
Sbjct: 63  GSDLHHFQLYCPSAGPDALSPWDTIGSHGARNFTLCKKPQAEKVGEDGKAASRPAIHRKA 122

Query: 121 SGSWKSWINKSLNMKIYSH 139
           SGSWKSWINKSLNMKIYSH
Sbjct: 123 SGSWKSWINKSLNMKIYSH 141

[Close]

BLAST of Cp4.1LG00g04170 vs. ExPASy TrEMBL
Match: A0A0A0KUW8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G569870 PE=4 SV=1)

HSP 1 Score: 253 bits (647), Expect = 7.79e-85
Identity = 123/139 (88.49%), Postives = 129/139 (92.81%), Query Frame = 0


Query: 1   MLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLPIL 60
           MLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIV+EEQLVA VIDTALKSYAREGRLPIL
Sbjct: 1   MLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVNEEQLVAAVIDTALKSYAREGRLPIL 60

Query: 61  GSDLHDFQLYCPSAGPDALSPWDTIGSHGARNFTLCKKPQAEKVGEDGKAASRPAIHRKA 120
           GSDL DFQLYCP+ GPDALSPWDTIGSHGARNF LCKKPQ EKV E+GK  S PAI RK+
Sbjct: 61  GSDLRDFQLYCPNTGPDALSPWDTIGSHGARNFMLCKKPQPEKVPEEGKTPSGPAIPRKS 120

Query: 121 SGSWKSWINKSLNMKIYSH 139
           +GSWKSWINKSLN+KIYSH
Sbjct: 121 AGSWKSWINKSLNLKIYSH 139

[Close]

BLAST of Cp4.1LG00g04170 vs. ExPASy TrEMBL
Match: A0A6J1FHE7 (uncharacterized protein At4g22758-like OS=Cucurbita moschata OX=3662 GN=LOC111445404 PE=4 SV=1)

HSP 1 Score: 251 bits (642), Expect = 4.51e-84
Identity = 122/139 (87.77%), Postives = 127/139 (91.37%), Query Frame = 0


Query: 1   MLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLPIL 60
           MLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIV+EEQLVA VIDTALKSYAREGRLPIL
Sbjct: 1   MLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVNEEQLVAAVIDTALKSYAREGRLPIL 60

Query: 61  GSDLHDFQLYCPSAGPDALSPWDTIGSHGARNFTLCKKPQAEKVGEDGKAASRPAIHRKA 120
           GSDL DFQLYCP AGPDALSPWDTIGSHG+RNF LCKKPQ EKVGE G +   P+I RK 
Sbjct: 61  GSDLRDFQLYCPIAGPDALSPWDTIGSHGSRNFMLCKKPQPEKVGEHGNSPPEPSIPRKG 120

Query: 121 SGSWKSWINKSLNMKIYSH 139
           +GSWKSWINKSLNMKIYSH
Sbjct: 121 TGSWKSWINKSLNMKIYSH 139

[Close]

BLAST of Cp4.1LG00g04170 vs. ExPASy TrEMBL
Match: A0A1S4DSB9 (uncharacterized protein At4g22758-like OS=Cucumis melo OX=3656 GN=LOC107990297 PE=4 SV=1)

HSP 1 Score: 251 bits (641), Expect = 6.40e-84
Identity = 121/139 (87.05%), Postives = 128/139 (92.09%), Query Frame = 0


Query: 1   MLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLPIL 60
           MLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIV+EEQLVA VIDTALKSYAREGRLPIL
Sbjct: 1   MLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVNEEQLVAAVIDTALKSYAREGRLPIL 60

Query: 61  GSDLHDFQLYCPSAGPDALSPWDTIGSHGARNFTLCKKPQAEKVGEDGKAASRPAIHRKA 120
           GSDL DFQLYCP+ GPDALSPWDTIGSHGARNF LCKKPQ EKV E+GK+   P I RK+
Sbjct: 61  GSDLRDFQLYCPNTGPDALSPWDTIGSHGARNFMLCKKPQPEKVSEEGKSPPGPTIPRKS 120

Query: 121 SGSWKSWINKSLNMKIYSH 139
           +GSWKSWINKSLN+KIYSH
Sbjct: 121 AGSWKSWINKSLNLKIYSH 139

[Close]

BLAST of Cp4.1LG00g04170 vs. TAIR 10
Match: AT1G70780.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: sperm cell, male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G23150.1); Has 143 Blast hits to 143 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 143; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 185.3 bits (469), Expect = 3.4e-47
Identity = 91/140 (65.00%), Postives = 106/140 (75.71%), Query Frame = 0


Query: 1   MLLY-KQKKNQNVKGNRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLPI 60
           MLLY KQKKNQN KGNR+LIS+ VLGSAGPIRF+  E+ LVA VIDTALK YAREGRLP+
Sbjct: 1   MLLYNKQKKNQNAKGNRILISVTVLGSAGPIRFVAYEDDLVASVIDTALKGYAREGRLPL 60

Query: 61  LGSDLHDFQLYCPSAGPDALSPWDTIGSHGARNFTLCKKPQAEKVGEDGKAASRPAIHRK 120
           LGSD +DF LYCP  GP+ALS WD IGS GARNF LC+KP+ +KV E    +       +
Sbjct: 61  LGSDFNDFLLYCPMVGPEALSTWDAIGSLGARNFMLCRKPEEKKVEESNGRSDSTINGAR 120

Query: 121 ASGSWKSWINKSLNMKIYSH 140
             GS K+WINKS N+K+ SH
Sbjct: 121 KGGSLKAWINKSFNLKVSSH 140

[Close]

BLAST of Cp4.1LG00g04170 vs. TAIR 10
Match: AT1G23150.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G70780.1); Has 124 Blast hits to 124 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 124; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 175.3 bits (443), Expect = 3.5e-44
Identity = 91/142 (64.08%), Postives = 107/142 (75.35%), Query Frame = 0


Query: 1   MLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLPIL 60
           MLLYK KKNQ VKGNR+LIS+  LGSAGPIRF+ +E  LVA VIDTALK YAREGRLPIL
Sbjct: 1   MLLYK-KKNQIVKGNRILISVTFLGSAGPIRFVANEGDLVASVIDTALKCYAREGRLPIL 60

Query: 61  GSDLHDFQLYCPSAGPDALSPWDTIGSHGARNFTLC-KKPQAEKVGEDGKAASRP--AIH 120
           GSD +DF  YCP  GP ALSPW+ IGS G RNF LC KKP+ +KV ED   ++ P     
Sbjct: 61  GSDFNDFVFYCPMVGPGALSPWEAIGSVGVRNFMLCKKKPEEKKVEEDKGRSNFPINGAR 120

Query: 121 RKASGSWKSWINKSLNMKIYSH 140
           + A GS+K+WINKSL +K+ +H
Sbjct: 121 KGAGGSFKAWINKSLRLKVTTH 141

[Close]

BLAST of Cp4.1LG00g04170 vs. TAIR 10
Match: AT5G37730.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G23150.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 99.4 bits (246), Expect = 2.5e-21
Identity = 51/115 (44.35%), Postives = 72/115 (62.61%), Query Frame = 0


Query: 8   KNQNVKG------NRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLPILG 67
           +N+NVKG       +LL+S+NVLGS GPIRF+ +E+  V+  I+T LK+YAR+GR+P+LG
Sbjct: 3   RNENVKGVMKRKNKKLLVSVNVLGSVGPIRFLANEDDEVSSAINTTLKAYARQGRIPVLG 62

Query: 68  SDLHDFQLYCPSAGPDALSPWDTIGSHGARNFTLCKKPQAEKVGEDGKAASRPAI 117
            D+ +F  Y  +AG + L P + IGS    NF +CKK        +G   SR  I
Sbjct: 63  FDVDNFIFYSINAGFNTLHPQEKIGSMDVTNFLMCKKEPRPLEKVEGIRESRARI 117

[Close]

BLAST of Cp4.1LG00g04170 vs. TAIR 10
Match: AT2G27830.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G22758.1); Has 131 Blast hits to 131 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 131; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 57.4 bits (137), Expect = 1.1e-08
Identity = 29/86 (33.72%), Postives = 51/86 (59.30%), Query Frame = 0


Query: 16  RLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLPIL-GSDLHDFQLYCPSA 75
           +LL+++ V GS G ++ I+S E  V+D+ID A++ Y +E R P L  S+   F L+    
Sbjct: 71  KLLLNVTVQGSLGAVQIIISPESTVSDLIDAAVRQYVKEARRPFLPESEPSRFDLHYSQF 130

Query: 76  GPDALSPWDTIGSHGARNFTLCKKPQ 101
             +++   + + S G+RNF LC + +
Sbjct: 131 SLESIVRDEKLISLGSRNFFLCGRKE 156

[Close]

BLAST of Cp4.1LG00g04170 vs. TAIR 10
Match: AT2G01554.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G70780.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 53.1 bits (126), Expect = 2.0e-07
Identity = 48/141 (34.04%), Postives = 63/141 (44.68%), Query Frame = 0


Query: 2   LLYKQKKNQNVKG---NRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLP 61
           +LY  K  +N K    NR L+SINVLGSAG   F  S++                   +P
Sbjct: 1   MLYNNKHQRNQKSKTTNRFLVSINVLGSAG---FHFSDQ-------------------IP 60

Query: 62  ILGSDLHDFQLYCPSAGPDALSPWDTIGSHGARNFTLCKKPQAEKVGEDGKAASRPAIHR 121
              SD     L  P  G         IGS G+RNF L  K + + + ED    +     R
Sbjct: 61  AF-SDF--IALTVPLKG--------KIGSTGSRNFVLSNKLETQNL-EDSMMTTTTT--R 105

Query: 122 KASGSWKSWINKSLNMKIYSH 140
           K SG WK+W+NKS  + + SH
Sbjct: 121 KTSGRWKAWLNKSFGLMVPSH 105

The following BLAST results are available for this feature:

BLAST of Cp4.1LG00g04170 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q56XJ7	9.2e-05	33.33	Uncharacterized protein At4g22758 OS=Arabidopsis thaliana OX=3702 GN=At4g22758 P...	[more]

BLAST of Cp4.1LG00g04170 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023521148.1	2.66e-97	100.00	uncharacterized protein At4g22758-like [Cucurbita pepo subsp. pepo] >XP_02352114...	[more]
XP_022959923.1	1.08e-96	99.28	uncharacterized protein At4g22758-like [Cucurbita moschata]	[more]
XP_022990881.1	3.10e-96	99.28	uncharacterized protein At4g22758 [Cucurbita maxima]	[more]
KAG7032577.1	5.06e-96	99.28	hypothetical protein SDJN02_06626, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_023540757.1	8.92e-92	85.80	uncharacterized protein At4g22758-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cp4.1LG00g04170 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H7B9	5.24e-97	99.28	uncharacterized protein At4g22758-like OS=Cucurbita moschata OX=3662 GN=LOC11146...	[more]
A0A6J1JP66	1.50e-96	99.28	uncharacterized protein At4g22758 OS=Cucurbita maxima OX=3661 GN=LOC111487636 PE...	[more]
A0A0A0KUW8	7.79e-85	88.49	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G569870 PE=4 SV=1	[more]
A0A6J1FHE7	4.51e-84	87.77	uncharacterized protein At4g22758-like OS=Cucurbita moschata OX=3662 GN=LOC11144...	[more]
A0A1S4DSB9	6.40e-84	87.05	uncharacterized protein At4g22758-like OS=Cucumis melo OX=3656 GN=LOC107990297 P...	[more]

BLAST of Cp4.1LG00g04170 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G70780.1	3.4e-47	65.00	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G23150.1	3.5e-44	64.08	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G37730.1	2.5e-21	44.35	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT2G27830.1	1.1e-08	33.72	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT2G01554.1	2.0e-07	34.04	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33270:SF34	SUBFAMILY NOT NAMED	coord: 1..135
IPR040358	Uncharacterized protein At4g22758-like	PANTHER	PTHR33270	BNAC05G50380D PROTEIN	coord: 1..135

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG00g04170.1	Cp4.1LG00g04170.1	mRNA