Cp4.1LG00g02940 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG00g02940
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	heavy metal-associated isoprenylated plant protein 37
Location	Cp4.1LG00: 9752642 .. 9754616 (+)
RNA-Seq Expression	Cp4.1LG00g02940
Synteny	Cp4.1LG00g02940

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGGTTGTAAGCAGCCAAAATATGGTAACTGAGCGATAGACAGAGAGAAAGAAGTGGGGCTGTCAAGTCGCTGTTGTTTTATTTGTTTCCTCAGTGTTTAACGTTAAATCACATCATCTCACAATTTCAAAACCCCCCTTCTCTCTATCTCTCTCTCTCTTCCCACTTTTTCAAAATCAAAATCAAAATCAAAATCTCTCCTTTTCTTTTACCCCTTCTCTCCCATGTGCCCCCTTTCCTTTCCTTTGTTTGCTTTTGAGGTAACTCTCTCAGTCCTCTGAATAAATTAACCCCCCTCCTCCCATGCCTGCCCATTAACCCCCCTTTCTCTCTACACTAACCCCGTCCCCCCTCCAAGAAATGACCAAAGAGGATGATTTTAAGCTACTAAAGTTTCAGGTTTTCCCCCTTTCTCTACAACCCACTTTCCATAATTCTCTGTTTTTCTTAAAAAAGTTGCCTTTTTTTTCTCTTTACTTCCTGCTCCTATTACGTTCGCTAAAGGAACATTTTGTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTGTGTGTGTGACTCTTTAAATCTCTGTTTTGAGTATTTGTTTTCTTTTTATAGACTTGTGATCTCAGAGTCAACATTTACTGTGATGGGTGTAAGCAGAAAGTGAAGAAACTTCTTCACAGGATAGAAGGTTTGTTCTTCTTTTTTCTATGTTCTTAGTAATGTAAAACAATGTTTTAAGTAGACTGCTGTTTAGTTGGATCTAGCTTGTTTGGTTACTGGGAAAGTGAGAGAAAATAAGAAACATTTCTGTTTGGTTTTGAAATTTTGTGATGAATCTTGTTTAAAACAGAGGAATTTAAGGAATCTTTTGATGAATGTATGTTGTATGAACAGGGGTTTTTCAGGTTGCTATAGGAGCAGAGGATCAGAAGGTTACAGTTTTAGGAAGTGTAGATTCTGCCACTTTGATCAATAAGCTGGTCCGAGCTGGAAAACATGCTGAGCTTTGGTCGCAGAAATCCGACACCAGCTCGAAACCAAAGAGCAACGACCATAAATCTTCTAACAAGGGACCGAAACTGGCTCCACTTTACTGCCACGATGATGACATTGATGGTTGTTTTGGTGGTGAGGAAGGAGCGTTTCAGTTCAGGGCAGCTAATCTTGATCTCCACAGGCAGCGAGCGACTCCCAGGAAGCCAATAGGCCCAGGTCAGGCAGTTGCCAGAAAGAACATCCCCTCTAGGATGGACCAGAAAACCTTGGAACCTCTGAACATGAACATTCCTCAACCGTTTGGCATGGGCAGAGGAAGTATCAATCCCGGGGAGCCGAAAAGAGCGAATAACAATGACCTGAATTCAATGATGAACATGGCGGGATTCAACGGCGGCAACCATTTAAATTTTGCCACACCTTCTTCAATTGGTGTTAATTCAACAAACACCTCTCAAGGAGGATACTTCAGCTACCAGCCATCTTCAACCTCTGGATTCCCCATGGCAACTGGTCAGTACCATAATCATCATCATCATCAGCAGCAGCAGCAGCCATTAATGAACATGAACATGAACAACATGGTAAACAGGCAGGCAATGAACCAGCAGCCTCAAATGATGTACAATAGAGCTCAATTGGTTCCACCAAATACAGGATATTACTACAATTACAATTCTAGCCCTGTTTATCCAAGTTATCCTTGTGCAGAGGATGGTCATTACTACCATGGACAAAGTAGTAACTCTGCAGCTGACATGTTCTGTGATGAGAGCACAAGCAGCAGTTGCTCAATCATGTAAGAAAGAAAGGGACAAAGATGATTGTGATGTTAAGGTTATTGGGGTGTTGTTTTTTCTTTGTATGTTTTAGGTGGGGGTTGTTTTTTTTGTGTTGAAGGGGTGTTTTCCTTTGTTTTTTGTCTTTTGGCAGTGGCAGTGGCAGTGTATTTTGTGGATTGTTCTTCAAAGATTATGTTTTGTGA

mRNA sequence

ATGGAAGGAGCGTTTCAGTTCAGGGCAGCTAATCTTGATCTCCACAGGCAGCGAGCGACTCCCAGGAAGCCAATAGGCCCAGGTCAGGCAGTTGCCAGAAAGAACATCCCCTCTAGGATGGACCAGAAAACCTTGGAACCTCTGAACATGAACATTCCTCAACCGTTTGGCATGGGCAGAGGAAGTATCAATCCCGGGGAGCCGAAAAGAGCGAATAACAATGACCTGAATTCAATGATGAACATGGCGGGATTCAACGGCGGCAACCATTTAAATTTTGCCACACCTTCTTCAATTGGTGTTAATTCAACAAACACCTCTCAAGGAGGATACTTCAGCTACCAGCCATCTTCAACCTCTGGATTCCCCATGGCAACTGGTCAGTACCATAATCATCATCATCATCAGCAGCAGCAGCAGCCATTAATGAACATGAACATGAACAACATGGTAAACAGGCAGGCAATGAACCAGCAGCCTCAAATGATGTACAATAGAGCTCAATTGGTTCCACCAAATACAGGATATTACTACAATTACAATTCTAGCCCTGTTTATCCAAGTTATCCTTGTGCAGAGGATGGTCATTACTACCATGGACAAAGTAGTAACTCTGCAGCTGACATGTTCTGTGATGAGAGCACAAGCAGCAGTTGCTCAATCATTGGCAGTGGCAGTGTATTTTGTGGATTGTTCTTCAAAGATTATGTTTTGTGA

Coding sequence (CDS)

ATGGAAGGAGCGTTTCAGTTCAGGGCAGCTAATCTTGATCTCCACAGGCAGCGAGCGACTCCCAGGAAGCCAATAGGCCCAGGTCAGGCAGTTGCCAGAAAGAACATCCCCTCTAGGATGGACCAGAAAACCTTGGAACCTCTGAACATGAACATTCCTCAACCGTTTGGCATGGGCAGAGGAAGTATCAATCCCGGGGAGCCGAAAAGAGCGAATAACAATGACCTGAATTCAATGATGAACATGGCGGGATTCAACGGCGGCAACCATTTAAATTTTGCCACACCTTCTTCAATTGGTGTTAATTCAACAAACACCTCTCAAGGAGGATACTTCAGCTACCAGCCATCTTCAACCTCTGGATTCCCCATGGCAACTGGTCAGTACCATAATCATCATCATCATCAGCAGCAGCAGCAGCCATTAATGAACATGAACATGAACAACATGGTAAACAGGCAGGCAATGAACCAGCAGCCTCAAATGATGTACAATAGAGCTCAATTGGTTCCACCAAATACAGGATATTACTACAATTACAATTCTAGCCCTGTTTATCCAAGTTATCCTTGTGCAGAGGATGGTCATTACTACCATGGACAAAGTAGTAACTCTGCAGCTGACATGTTCTGTGATGAGAGCACAAGCAGCAGTTGCTCAATCATTGGCAGTGGCAGTGTATTTTGTGGATTGTTCTTCAAAGATTATGTTTTGTGA

Protein sequence

MEGAFQFRAANLDLHRQRATPRKPIGPGQAVARKNIPSRMDQKTLEPLNMNIPQPFGMGRGSINPGEPKRANNNDLNSMMNMAGFNGGNHLNFATPSSIGVNSTNTSQGGYFSYQPSSTSGFPMATGQYHNHHHHQQQQQPLMNMNMNNMVNRQAMNQQPQMMYNRAQLVPPNTGYYYNYNSSPVYPSYPCAEDGHYYHGQSSNSAADMFCDESTSSSCSIIGSGSVFCGLFFKDYVL

Homology

[Close]

BLAST of Cp4.1LG00g02940 vs. NCBI nr
Match: XP_023520932.1 (heavy metal-associated isoprenylated plant protein 37 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 441 bits (1133), Expect = 8.69e-154
Identity = 220/221 (99.55%), Postives = 221/221 (100.00%), Query Frame = 0


Query: 2   EGAFQFRAANLDLHRQRATPRKPIGPGQAVARKNIPSRMDQKTLEPLNMNIPQPFGMGRG 61
           EGAFQFRAANLDLHRQRATPRKPIGPGQAVARKNIPSRMDQKTLEPLNMNIPQPFGMGRG
Sbjct: 119 EGAFQFRAANLDLHRQRATPRKPIGPGQAVARKNIPSRMDQKTLEPLNMNIPQPFGMGRG 178

Query: 62  SINPGEPKRANNNDLNSMMNMAGFNGGNHLNFATPSSIGVNSTNTSQGGYFSYQPSSTSG 121
           SINPGEPKRANNNDLNSMMNMAGFNGGNHLNFATPSSIGVNSTNTSQGGYFSYQPSSTSG
Sbjct: 179 SINPGEPKRANNNDLNSMMNMAGFNGGNHLNFATPSSIGVNSTNTSQGGYFSYQPSSTSG 238

Query: 122 FPMATGQYHNHHHHQQQQQPLMNMNMNNMVNRQAMNQQPQMMYNRAQLVPPNTGYYYNYN 181
           FPMATGQYHNHHHHQQQQQPLMNMNMNNMVNRQAMNQQPQMMYNRAQLVPPNTGYYYNYN
Sbjct: 239 FPMATGQYHNHHHHQQQQQPLMNMNMNNMVNRQAMNQQPQMMYNRAQLVPPNTGYYYNYN 298

Query: 182 SSPVYPSYPCAEDGHYYHGQSSNSAADMFCDESTSSSCSII 222
           SSPVYPSYPCAEDGHYYHGQSSNSAADMFCDESTSSSCSI+
Sbjct: 299 SSPVYPSYPCAEDGHYYHGQSSNSAADMFCDESTSSSCSIM 339

[Close]

BLAST of Cp4.1LG00g02940 vs. NCBI nr
Match: KAG7032547.1 (Heavy metal-associated isoprenylated plant protein 37, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 419 bits (1077), Expect = 3.00e-145
Identity = 213/223 (95.52%), Postives = 217/223 (97.31%), Query Frame = 0


Query: 2   EGAFQFRAANLDLHRQRATPRKPIGPGQAVARKNIPSRMDQKTLEPLNMNIPQPFGMGRG 61
           EGAFQFRAANLDLHRQRATPRKPIGPGQAVARKNIPSRMDQKTLEPLNMNIPQPFGMGRG
Sbjct: 118 EGAFQFRAANLDLHRQRATPRKPIGPGQAVARKNIPSRMDQKTLEPLNMNIPQPFGMGRG 177

Query: 62  SINPGEPKRANNNDLNSMMNMAGFNGGNHLNFATPSSIGVNSTNTSQGGYFSYQPSSTSG 121
           SINPGEP+RANNNDLNSMMNMAGFNGGNHLNFATPSSIGVNSTNTSQGGYFSYQPSSTSG
Sbjct: 178 SINPGEPRRANNNDLNSMMNMAGFNGGNHLNFATPSSIGVNSTNTSQGGYFSYQPSSTSG 237

Query: 122 FPMATGQYHNHHHHQQQQQPLM--NMNMNNMVNRQAMNQQPQMMYNRAQLVPPNTGYYYN 181
           FPMATGQYH+HH  QQQQQPLM  NMNMNNMVNRQAMNQQPQMMYNRAQLVPPNTGYYYN
Sbjct: 238 FPMATGQYHHHHQQQQQQQPLMDMNMNMNNMVNRQAMNQQPQMMYNRAQLVPPNTGYYYN 297

Query: 182 YNSSPVYPSYPCAEDGHYYHGQSSNSAADMFCDESTSSSCSII 222
           YN SPVYPSYPCAEDGHYYHGQSSNSAADMF DE+TSSSCSI+
Sbjct: 298 YNCSPVYPSYPCAEDGHYYHGQSSNSAADMFYDENTSSSCSIM 340

[Close]

BLAST of Cp4.1LG00g02940 vs. NCBI nr
Match: KAG6601839.1 (Heavy metal-associated isoprenylated plant protein 37, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 421 bits (1081), Expect = 3.77e-145
Identity = 213/223 (95.52%), Postives = 218/223 (97.76%), Query Frame = 0


Query: 2   EGAFQFRAANLDLHRQRATPRKPIGPGQAVARKNIPSRMDQKTLEPLNMNIPQPFGMGRG 61
           EGAFQFRAANLDLHRQRATPRKPIGPGQAVARKNIPSRMDQKTLEPLNMNIPQPFGMGRG
Sbjct: 119 EGAFQFRAANLDLHRQRATPRKPIGPGQAVARKNIPSRMDQKTLEPLNMNIPQPFGMGRG 178

Query: 62  SINPGEPKRANNNDLNSMMNMAGFNGGNHLNFATPSSIGVNSTNTSQGGYFSYQPSSTSG 121
           SINPGEP+RANNNDLNSMMNMAGFNGGNHLNFATPSSIGVNSTNTSQGGYFSYQPSSTSG
Sbjct: 179 SINPGEPRRANNNDLNSMMNMAGFNGGNHLNFATPSSIGVNSTNTSQGGYFSYQPSSTSG 238

Query: 122 FPMATGQYHNHHHHQQQQQPLM--NMNMNNMVNRQAMNQQPQMMYNRAQLVPPNTGYYYN 181
           FP+ATGQYH+HHH QQQQQPLM  NMNMNNMVNRQAMNQQPQMMYNRAQLVPPNTGYYYN
Sbjct: 239 FPVATGQYHHHHHQQQQQQPLMDMNMNMNNMVNRQAMNQQPQMMYNRAQLVPPNTGYYYN 298

Query: 182 YNSSPVYPSYPCAEDGHYYHGQSSNSAADMFCDESTSSSCSII 222
           YN SPVYPSYPCAEDGHYYHGQSSNSAADMF DE+TSSSCSI+
Sbjct: 299 YNCSPVYPSYPCAEDGHYYHGQSSNSAADMFYDENTSSSCSIM 341

[Close]

BLAST of Cp4.1LG00g02940 vs. NCBI nr
Match: XP_022953864.1 (heavy metal-associated isoprenylated plant protein 37 [Cucurbita moschata])

HSP 1 Score: 416 bits (1068), Expect = 7.80e-144
Identity = 211/225 (93.78%), Postives = 216/225 (96.00%), Query Frame = 0


Query: 2   EGAFQFRAANLDLHRQRATPRKPIGPGQAVARKNIPSRMDQKTLEPLNMNIPQPFGMGRG 61
           EGAFQFRAANLDLHRQRATPRKPIGPGQAVARKNIPSRMDQKTLEPLNMNIPQPFGMGRG
Sbjct: 119 EGAFQFRAANLDLHRQRATPRKPIGPGQAVARKNIPSRMDQKTLEPLNMNIPQPFGMGRG 178

Query: 62  SINPGEPKRANNNDLNSMMNMAGFNGGNHLNFATPSSIGVNSTNTSQGGYFSYQPSSTSG 121
           SINPGEP+RANNNDLNSMMNMAGFNGGNHLNFAT SSIGVNSTNTSQGGYFSYQPSSTSG
Sbjct: 179 SINPGEPRRANNNDLNSMMNMAGFNGGNHLNFATSSSIGVNSTNTSQGGYFSYQPSSTSG 238

Query: 122 FPMATGQYHNHHHHQQQQQPLMNMNMN----NMVNRQAMNQQPQMMYNRAQLVPPNTGYY 181
           FPMATGQYH+HH  QQQQQPLM+MNMN    NMVNRQAMNQQPQMMYNRAQLVPPNTGYY
Sbjct: 239 FPMATGQYHHHHQQQQQQQPLMDMNMNMDTNNMVNRQAMNQQPQMMYNRAQLVPPNTGYY 298

Query: 182 YNYNSSPVYPSYPCAEDGHYYHGQSSNSAADMFCDESTSSSCSII 222
           YNYN SPVYPSYPCAEDGHYYHGQSSNSAADMFCDE+T SSCSI+
Sbjct: 299 YNYNCSPVYPSYPCAEDGHYYHGQSSNSAADMFCDENTRSSCSIM 343

[Close]

BLAST of Cp4.1LG00g02940 vs. NCBI nr
Match: XP_022989984.1 (heavy metal-associated isoprenylated plant protein 37 [Cucurbita maxima])

HSP 1 Score: 410 bits (1053), Expect = 1.35e-141
Identity = 211/224 (94.20%), Postives = 214/224 (95.54%), Query Frame = 0


Query: 2   EGAFQFRAANLDLHRQRATPRKPIGPGQAVARKNIPSRMDQKTLEPLNMNIPQPFGMGRG 61
           EGAFQFRAANLDLHRQRATPRK IGPGQAVARKNIPSRMDQKTLEPLNMNIPQPFGMGRG
Sbjct: 119 EGAFQFRAANLDLHRQRATPRKTIGPGQAVARKNIPSRMDQKTLEPLNMNIPQPFGMGRG 178

Query: 62  SINPGEPKRANNNDLNSMMNMAGFNGGNHLNFATPSSIGVNSTNTSQGGYFSYQPSSTSG 121
           SINPGEPKRANNNDLNSMMNMAGFNGGNHLNFATPSSIGVNSTNTSQGGYFSYQPSSTSG
Sbjct: 179 SINPGEPKRANNNDLNSMMNMAGFNGGNHLNFATPSSIGVNSTNTSQGGYFSYQPSSTSG 238

Query: 122 FPMATGQYHNHHHHQQQQQ---PLMNMNMNNMVNRQAMNQQPQMMYNRAQLVPPNTGYYY 181
           FPMATGQYH+HH  QQQQQ   PLMNMN  NMVNRQAMNQQPQMMYNRAQLVPPNTGYYY
Sbjct: 239 FPMATGQYHHHHQQQQQQQQQQPLMNMN--NMVNRQAMNQQPQMMYNRAQLVPPNTGYYY 298

Query: 182 NYNSSPVYPSYPCAEDGHYYHGQSSNSAADMFCDESTSSSCSII 222
           NYN SPVYPSYPCAE GHYYHGQSSNSAADMFCDE+TSSSCSI+
Sbjct: 299 NYNCSPVYPSYPCAEGGHYYHGQSSNSAADMFCDENTSSSCSIM 340

[Close]

BLAST of Cp4.1LG00g02940 vs. ExPASy TrEMBL
Match: A0A6J1GR35 (heavy metal-associated isoprenylated plant protein 37 OS=Cucurbita moschata OX=3662 GN=LOC111456271 PE=4 SV=1)

HSP 1 Score: 416 bits (1068), Expect = 3.78e-144
Identity = 211/225 (93.78%), Postives = 216/225 (96.00%), Query Frame = 0


Query: 2   EGAFQFRAANLDLHRQRATPRKPIGPGQAVARKNIPSRMDQKTLEPLNMNIPQPFGMGRG 61
           EGAFQFRAANLDLHRQRATPRKPIGPGQAVARKNIPSRMDQKTLEPLNMNIPQPFGMGRG
Sbjct: 119 EGAFQFRAANLDLHRQRATPRKPIGPGQAVARKNIPSRMDQKTLEPLNMNIPQPFGMGRG 178

Query: 62  SINPGEPKRANNNDLNSMMNMAGFNGGNHLNFATPSSIGVNSTNTSQGGYFSYQPSSTSG 121
           SINPGEP+RANNNDLNSMMNMAGFNGGNHLNFAT SSIGVNSTNTSQGGYFSYQPSSTSG
Sbjct: 179 SINPGEPRRANNNDLNSMMNMAGFNGGNHLNFATSSSIGVNSTNTSQGGYFSYQPSSTSG 238

Query: 122 FPMATGQYHNHHHHQQQQQPLMNMNMN----NMVNRQAMNQQPQMMYNRAQLVPPNTGYY 181
           FPMATGQYH+HH  QQQQQPLM+MNMN    NMVNRQAMNQQPQMMYNRAQLVPPNTGYY
Sbjct: 239 FPMATGQYHHHHQQQQQQQPLMDMNMNMDTNNMVNRQAMNQQPQMMYNRAQLVPPNTGYY 298

Query: 182 YNYNSSPVYPSYPCAEDGHYYHGQSSNSAADMFCDESTSSSCSII 222
           YNYN SPVYPSYPCAEDGHYYHGQSSNSAADMFCDE+T SSCSI+
Sbjct: 299 YNYNCSPVYPSYPCAEDGHYYHGQSSNSAADMFCDENTRSSCSIM 343

[Close]

BLAST of Cp4.1LG00g02940 vs. ExPASy TrEMBL
Match: A0A6J1JQU9 (heavy metal-associated isoprenylated plant protein 37 OS=Cucurbita maxima OX=3661 GN=LOC111487013 PE=4 SV=1)

HSP 1 Score: 410 bits (1053), Expect = 6.52e-142
Identity = 211/224 (94.20%), Postives = 214/224 (95.54%), Query Frame = 0


Query: 2   EGAFQFRAANLDLHRQRATPRKPIGPGQAVARKNIPSRMDQKTLEPLNMNIPQPFGMGRG 61
           EGAFQFRAANLDLHRQRATPRK IGPGQAVARKNIPSRMDQKTLEPLNMNIPQPFGMGRG
Sbjct: 119 EGAFQFRAANLDLHRQRATPRKTIGPGQAVARKNIPSRMDQKTLEPLNMNIPQPFGMGRG 178

Query: 62  SINPGEPKRANNNDLNSMMNMAGFNGGNHLNFATPSSIGVNSTNTSQGGYFSYQPSSTSG 121
           SINPGEPKRANNNDLNSMMNMAGFNGGNHLNFATPSSIGVNSTNTSQGGYFSYQPSSTSG
Sbjct: 179 SINPGEPKRANNNDLNSMMNMAGFNGGNHLNFATPSSIGVNSTNTSQGGYFSYQPSSTSG 238

Query: 122 FPMATGQYHNHHHHQQQQQ---PLMNMNMNNMVNRQAMNQQPQMMYNRAQLVPPNTGYYY 181
           FPMATGQYH+HH  QQQQQ   PLMNMN  NMVNRQAMNQQPQMMYNRAQLVPPNTGYYY
Sbjct: 239 FPMATGQYHHHHQQQQQQQQQQPLMNMN--NMVNRQAMNQQPQMMYNRAQLVPPNTGYYY 298

Query: 182 NYNSSPVYPSYPCAEDGHYYHGQSSNSAADMFCDESTSSSCSII 222
           NYN SPVYPSYPCAE GHYYHGQSSNSAADMFCDE+TSSSCSI+
Sbjct: 299 NYNCSPVYPSYPCAEGGHYYHGQSSNSAADMFCDENTSSSCSIM 340

[Close]

BLAST of Cp4.1LG00g02940 vs. ExPASy TrEMBL
Match: A0A0A0KRM8 (HMA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G571520 PE=4 SV=1)

HSP 1 Score: 243 bits (620), Expect = 1.41e-75
Identity = 146/220 (66.36%), Postives = 161/220 (73.18%), Query Frame = 0


Query: 23  KPIGPGQAVARKNIPSRMDQKTLEPLNMNIPQPFGMGRGSINPGEPKRANNNDLNSMMNM 82
           K I P Q ++ KN PS +D+KTL  L MN  Q FG GR SINPGE KRANNNDLNSMM+M
Sbjct: 182 KKIDPNQPMSIKNTPSEIDRKTLATLKMNNAQLFGNGRESINPGEAKRANNNDLNSMMSM 241

Query: 83  AGFNGGNHLNFATPSSIGVNSTNTSQG-------GY-FSYQPSSTSGFPMATGQYHNHHH 142
           AGFNGGN LNFATPSSI VNSTNTSQG       GY + YQP STSGF MATGQYH    
Sbjct: 242 AGFNGGNLLNFATPSSIDVNSTNTSQGLHLQQNNGYGYGYQPPSTSGFSMATGQYH---- 301

Query: 143 HQQQQQPLM------------NMNMNNMVNRQAMNQQPQMMYNRAQLVPPNTGYYYNYNS 202
           HQQQQQP              +MNMNNM+NRQAMNQQPQMMYNRAQLVP NTGYY++YN 
Sbjct: 302 HQQQQQPNFISGYNQYQQQQPSMNMNNMLNRQAMNQQPQMMYNRAQLVPSNTGYYFSYNP 361

Query: 203 SPVYPSYPCAEDGHYYHGQSSNSAADMFCDESTSSSCSII 222
           SPV+PS+P        HG +SNSAADMF DE+TSSSCSI+
Sbjct: 362 SPVHPSHPNV------HGYNSNSAADMFSDENTSSSCSIM 391

[Close]

BLAST of Cp4.1LG00g02940 vs. ExPASy TrEMBL
Match: A0A1S3CSU7 (putative mediator of RNA polymerase II transcription subunit 29 OS=Cucumis melo OX=3656 GN=LOC103504571 PE=4 SV=1)

HSP 1 Score: 243 bits (619), Expect = 1.99e-75
Identity = 147/219 (67.12%), Postives = 160/219 (73.06%), Query Frame = 0


Query: 23  KPIGPGQAVARKNIPSRMDQKTLEPLNMNIPQPFGMGRGSINPGEPKRANNNDLNSMMNM 82
           K I P Q ++ KN PS +D+KTL  L MN  Q FG GR SIN GE KRANNNDLNSMM+M
Sbjct: 181 KKIDPNQPMSIKNTPSEIDRKTLAALKMNNAQLFGNGRESINLGEAKRANNNDLNSMMSM 240

Query: 83  AGFNGGNHLNFATPSSIGVNSTNTSQG-------GY-FSYQPSSTSGFPMATGQYHNHHH 142
           AGFNGGN LNFATPSSI VNSTN SQG       GY + YQPSSTSGF MATGQYH    
Sbjct: 241 AGFNGGNLLNFATPSSIDVNSTNASQGLHLQQNNGYGYGYQPSSTSGFSMATGQYHPQQQ 300

Query: 143 HQQ-----------QQQPLMNMNMNNMVNRQAMNQQPQMMYNRAQLVPPNTGYYYNYNSS 202
            QQ           QQQPLMNMN  NM+NRQAMNQQPQMMYNRAQLVP NTGYY++YN S
Sbjct: 301 QQQPTFISGYNQYQQQQPLMNMN--NMLNRQAMNQQPQMMYNRAQLVPSNTGYYFSYNPS 360

Query: 203 PVYPSYPCAEDGHYYHGQSSNSAADMFCDESTSSSCSII 222
           PV+PSYP      Y HG +SNSAADMF DE+TSSSCSI+
Sbjct: 361 PVHPSYP------YVHGYNSNSAADMFSDENTSSSCSIM 391

[Close]

BLAST of Cp4.1LG00g02940 vs. ExPASy TrEMBL
Match: A0A5D3E327 (Putative mediator of RNA polymerase II transcription subunit 29 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold426G00190 PE=4 SV=1)

HSP 1 Score: 243 bits (619), Expect = 2.50e-75
Identity = 147/219 (67.12%), Postives = 160/219 (73.06%), Query Frame = 0


Query: 23  KPIGPGQAVARKNIPSRMDQKTLEPLNMNIPQPFGMGRGSINPGEPKRANNNDLNSMMNM 82
           K I P Q ++ KN PS +D+KTL  L MN  Q FG GR SIN GE KRANNNDLNSMM+M
Sbjct: 189 KKIDPNQPMSIKNTPSEIDRKTLAALKMNNAQLFGNGRESINLGEAKRANNNDLNSMMSM 248

Query: 83  AGFNGGNHLNFATPSSIGVNSTNTSQG-------GY-FSYQPSSTSGFPMATGQYHNHHH 142
           AGFNGGN LNFATPSSI VNSTN SQG       GY + YQPSSTSGF MATGQYH    
Sbjct: 249 AGFNGGNLLNFATPSSIDVNSTNASQGLHLQQNNGYGYGYQPSSTSGFSMATGQYHPQQQ 308

Query: 143 HQQ-----------QQQPLMNMNMNNMVNRQAMNQQPQMMYNRAQLVPPNTGYYYNYNSS 202
            QQ           QQQPLMNMN  NM+NRQAMNQQPQMMYNRAQLVP NTGYY++YN S
Sbjct: 309 QQQPTFISGYNQYQQQQPLMNMN--NMLNRQAMNQQPQMMYNRAQLVPSNTGYYFSYNPS 368

Query: 203 PVYPSYPCAEDGHYYHGQSSNSAADMFCDESTSSSCSII 222
           PV+PSYP      Y HG +SNSAADMF DE+TSSSCSI+
Sbjct: 369 PVHPSYP------YVHGYNSNSAADMFSDENTSSSCSIM 399

The following BLAST results are available for this feature:

BLAST of Cp4.1LG00g02940 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG00g02940 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023520932.1	8.69e-154	99.55	heavy metal-associated isoprenylated plant protein 37 [Cucurbita pepo subsp. pep...	[more]
KAG7032547.1	3.00e-145	95.52	Heavy metal-associated isoprenylated plant protein 37, partial [Cucurbita argyro...	[more]
KAG6601839.1	3.77e-145	95.52	Heavy metal-associated isoprenylated plant protein 37, partial [Cucurbita argyro...	[more]
XP_022953864.1	7.80e-144	93.78	heavy metal-associated isoprenylated plant protein 37 [Cucurbita moschata]	[more]
XP_022989984.1	1.35e-141	94.20	heavy metal-associated isoprenylated plant protein 37 [Cucurbita maxima]	[more]

BLAST of Cp4.1LG00g02940 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GR35	3.78e-144	93.78	heavy metal-associated isoprenylated plant protein 37 OS=Cucurbita moschata OX=3...	[more]
A0A6J1JQU9	6.52e-142	94.20	heavy metal-associated isoprenylated plant protein 37 OS=Cucurbita maxima OX=366...	[more]
A0A0A0KRM8	1.41e-75	66.36	HMA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G571520 PE=4 SV...	[more]
A0A1S3CSU7	1.99e-75	67.12	putative mediator of RNA polymerase II transcription subunit 29 OS=Cucumis melo ...	[more]
A0A5D3E327	2.50e-75	67.12	Putative mediator of RNA polymerase II transcription subunit 29 OS=Cucumis melo ...	[more]

BLAST of Cp4.1LG00g02940 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 14..35
None	No IPR available	PANTHER	PTHR45868	HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 33-RELATED	coord: 64..221
None	No IPR available	PANTHER	PTHR45868:SF19	HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 37	coord: 64..221

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG00g02940.1	Cp4.1LG00g02940.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding