Cp4.1LG00g01670 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG00g01670
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	nuclear speckle splicing regulatory protein 1-like
Location	Cp4.1LG00: 3950742 .. 3961077 (+)
RNA-Seq Expression	Cp4.1LG00g01670
Synteny	Cp4.1LG00g01670

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACGGTAAAGGACTGCGACCACCACCACCACCACGACTGCGAGCGCCGCCGTCTCTACCGCCGAATAGCCTGCGCCATCTTCACTGTCCTCCTCTTGATTAGCCTTGTCATCTTCCTCATCTGGGCTATCCTCCGGCCGTCCAAGCCCCGCCTCATTCTCCAAGACGTCACCGTTTTCGGCCTGAACGTCTCGTCGGTGCCACCGGCTGCCATCTCGATCACCATGCAGGTCACCATCTCCTCCCACAACCCCAACTCCCGCATCGGTGTTTACTACCAAACCATGGATGTTTACGCCGCCTACCGCGGCCAACAGGTCACTCTCCCGACGCTCTTGCCGCCGACTTACCAAGGCCACAATGATGTCACCGTTTGGTCGCCGTTTTTGTACGGCGAAGCTGTGCCGGTGGCGCCCGAGTTTGCTGAAGCTTTGAATGAGGATAATAACGTTGGAGCCATGCTGTTCAATATCAAGATCAATGGACAGGTTTTGTTCGTATAATATATTTTATATAGCTGTAATCAGTATTTTTTTTTTTTTTTTTCTTAACATTAATATATTTTGTCTCGACGAAACAGGTTAGGTGGAAGGTTGGGAGCTGGATCTCAGGCAGGTATCGGTTGAACGCGAATTGTCCGGCGTATATAAAGTTCGGCGATCCAAAGAATGGGATTGCATTCGGACCGGCGATGAAGTTTCGGTTTGTCCAAGGTTGTTATGTCGATATTTAAGGTCGCAAGAGTCCACTTCTTGTATTTTCTTTTCCACGACCCTTATAAGTCTTTGTGATCAACGAGATTTATTTGAATTATAGTTTTATTCTTTAAATCTGACTCCTTTTTATATGTATACACACATAATAGATTGAGGGAACTTTTTGGACCAACCTAAAAGTTCGGGTTGGTTGGATTAGTAGTCTAACCTAACTCGAAATTGTTTTGCAACTCAACCTAATTCTCTATTTTCAGATGGTTGAAAAAAATATATATTTTTTTTAAAAAGTTATCCACCATACATTATCATTCTTGGTTAAAAGTTCATAAACAAACACAAATTCATCCATAATTATTCAAATAAACAATTTTTTTATTTTTTATAATATAGTCCGAGAATTGTAATATTATAACATATTCTAAGAAAATATAAGAATAGATTCTAAAATTAAAAAAAAAATAAAAATAAAAACAAATATAAATATATTTTTATTTCTCGTGAAAAGATTTATTTGTGTACGACAGAGCTGGAGGGTGAGAATATTTACTAAAACCACCTCACTAAATAGTGCGTGAAAGTTCTCTATTTATAATTCATATGGGCTTATGAAAGGAAGCCTTAGAAGCCCAATTCGTCGTATTCCATTGGGCCCGGCCCAAATCGTTTTCATTTAAAATAAAAAGAAAAAGAAAAAAACTCCTCCCTCGACCCTCAGTTTCACGGCGGCTCCCCCTCCTTCGGATCAGGCACCGCCGTTCTGCTCCCTTTTTCATCTCTGGATCTCAGGTATTCTTCTTAATTCCCATCTCTGTCTTTCAATCTTTCTTGTTTTGCTATATTTTGAATCCAATCTTCTGGTTTCATTGCAACCGATTTTGCTCCTCGATGGGTTCATCCGATTTCTCACTCGAATATCAGCTTCAATTTACTTCTGGCCTGTTTGGAATTGCCAAAATCACCTTTGCAATTGCGCAGAGGATGAAATTGATTTTTGAAGTGTTAGTTGGTAGATGATTTTTGATAGGGTGACTGACCTGAAATCAGCTCCAAAATTTACCTGGATTTTATTCAGCTTGCCCATAAATATAAGAACACGATTCTCAGCCCTGAACAATTTCTTTGCTTTCGATTTTTTCCGCTTTCTCTCACCATTGTAGCATCTTCAGAGGACTCTTTCATCTCCGGCCGCTTTCTCTCTCGTTCTGCTGATCATTTCGTTGGTTTTCGCTGGTAGTTGTTAGCTTCATCCTTGTTTGAGTTTTGGACGTGTGGTTTCCACATTGATTGTGAACTGTTTGCATTATTCTTAATTTTGAACTAGGTTTTCAATTTGTTTATGTAATTTTGACTGGTGGTTTTGATTTGTGTTTCGTTTTGAACTAGGTTTTTGATTTGTTCCGTAATTGCTTCATTGATTAGGTTGCCAATGGTGTGTTCTTTGCTTTTCTTACTTATGATTGAGTGGTGTATTTCTGGAATTCGACGGCAGTAAGTTTTGTTTCTTTGGTGTGATGATGTGTTTTTGTTTGTGCTTTTCGTGTGGTATTGCATTGTTGGAGTTTGCCTTCATTTGTGAAGCTTTTCTGTTTTCGATTTTGATCGTACTGAAGGGGCTTTTTTTTGTTAATTGTGTATATGAAAATCCTTGCTGGAGCATTGTTATTTGGAAGCTTTTGGCTACCATTATATTTCTAGGGAGCTTTTTTGTTAGTTGGAAGCTTTTGGCTACCATTATATTTCTAGGGGGCTTTTCTTTGGTTGTCATTGTTTTGATTGTGATAAGATCAGTAATCTTCTACCATTTTGTTTCCTTCTCATCCTCCTCTGATCAATAATCTTACTTCTCTTTCTACTTTTGCATCTGTTTTTTTGTGAATTGTTCATTTAGCTATATATATATATATATTATCATAATTCTGGTGTGAATAGTTAATTTAAGTTTAGCAAATATTATATGTAAATCACTTCAAACCAAACATTCAAATGGCTATATGAAAATCACTTTACAAAACCAATTGTAATTAGATCTCTTTTTATAAAATCACTTATACTACAATGAGTCTCAAACATGCCCTTCATGATTAAACCCATTTGAGTTTGAGCATGCTTGTTCTATCCCGTTTGGTTTTGTGTTCAACTTGATTCGGATTTTACACTTCCTTCAGTTCTCATTTCTTTCCATCTTATTGGTTGTTTTCCGTTTCACATGTTCTTCATTTTTGCGTGCAATCCTTTTCTGTTCTTAATCTCTTCGATTTGATTATTCTTTTTCATATCTTTTTGCACTTGTCCCATCGCCCTGGATTTCAATTTCATTTTCTCTGTGCTCTTCAATTTCGATTTTGCAAGTCCAGTCATCATCTCCACCAAGTGTTTTTCTAATTCCACCTGTGTTCTTCTAGTCCCTGAACCCATATCAAACTTCTCTGGCTAACTTGATTGGAACAAAGGATTGAAATAGAAATTGTACTGAAAACTTGATTAACAAAAGAAAAAAGAAAAAAGGGAAAATATTCCAAAGCAACTTAGAGGGACCTCAACCTGAGCAAGTTGAAGCTAAGAGAGAAAAATACACTTTTGATATCTCAGGTTTGAGTTTGGTGCTAAGTTCGGTGCATTTAGGTACCTGAGCTTTCAAACTCAACAATTTAGGCCATGAGTTTTGGATTTAGTTGCATTTTAGTTCTTCCGTCCAAATTTTAATTTTCTTTTTTCTTCTCTCCCTTCTCTTCTCTTTTCTTTCTCCCTCCCCCTCACATCCTCCTCCTTCTTCCATGGCTACCGTAGCCGTGCACCATCATCACAACTAGTTGCCTCTTTCGACAGACCATAATGACAATCCGATAGCCTCTGATTGGTGGTGACAAACATAGCTTGCACACCCATGGCTTCACGACCCACTGATGATAACAATTCCTTAAATTTGTGACTCTAACAACTCCTCCCAATTGACGGTGACTTGACAATACTCACGAATTGATCTGGTAAAGCCGCGGAAACCTGTGAGCTAATCCAGATGTCATATCTGGAACAAACCCAAATCTGGTGCAAGGAGGTGATAGTTGATGGCTTTGTTGTGAGGGGGCAATCACTGACAATGCTAGTGCGAAGAGGCATTGTTTGTCAGGCTTTGCTGCTGCAAAGATTATTCCTTGACAGAGCTGTTGCGAGGACGTACCCTCAACAACGAATGTGCAACTATCACAAGAGAAGAGAGACGAAGATAAAGAGGGGGAGTGTAACAAGGCTAATACACCAGATCCCATCAGAACTCACTCCCAGAGTGTAACAAGGCTAATACACCAGATCCCATCAGAACTCCCATCAGAACTCTGTTGTTAAGCGTGGGAAGTCCTTGTGTTGGACCCCTTTAAAATGTAATGGACTGATTTGGAAAATATGATAATAATTTCCGCTAGAAATCTTGCGAGATTTTCGACAAGGGTTTAACGCAAGTGGAAATGTTTTCTTAATCCCTTAAAAGCCCTTTTTCATCCATCTATCCCATTACCTTTGTTTTGCTGTTTACGCATGCACCGAGAGCCAAAAAGAGTGAAAGAAACGAGAAGTCGAGAGAGAGATTGAAGGATTTGGAGAAGGGAAATCGAGAAGCTTCGTTTGTGAGATTTTTGGGGTTTAGGGAAGAGGTTTACCGTGGAGTTGTTGTACGAGTGAGAGGCGGACGAACGGTGGCAGAAACGTGCGGTTATGGCGTCAGAATTGTTGGCATAAACGTGCAGTTACGACGTTGGAGTCGTTAGCATCTCCGTCGAAGAAAGGAAAGAGGATATCTAGGGGTTTTCAGCATATTCGGGTGAGGAATAAAGAACATCGGGTCGGCATTCAGATCCGGATATAGCCCACGATCCAAATATAATAACTAACCCAATTGTCACAACCCAACTGTAGCCCACGGTAGCCCATCAGCACATACAACCCTGTCTAACCCCAACACAAACTGCACATACAACCCTGTCTAACCCCAACACAAACTGCCGTGCTATTCTGTAGTCAATGTCCACCAACTCCAAGGCGAAATGATTCAACTTGGAAAACTCTCCGGCGTATGTGGTAACAAAACGCCCCCTCTGACACAACTGGGTGAACTCTTGCTGCTTGCGAAGTTGAACGTCCTCTCGGTATAGTACTCTTCAATAAAAGCACCCTTGAATTTCGCCCACGAGATTGCACCTCCCTCAGGACTAATAATTTCGCGGGTGGACTGCCACCATAGTTCTGCATCATCTTGCAGCATGAATGCTGCACACTCCACCTTCTGATCTTTAGGATAGTTGGTCAACACAAACATAGTCTCTATAGATCTAAGCCACATTTGTGCTACAGTCGGATCATTAGAAGTTCCCTTAAAGGTTCATGGGTCACCCCTCTTGAAATCACGCAAGTACCTTACTTCCTTGGTCGATGATGAGTCATTTGCTTGTTGATTAGCAGTCAGGTTTTGTATAACAGTTTGCAATGCGTCCACCAGAGCAGCTGTACTATCATAATGCATTACTATCATAACGCAATGCATTCACCACAGTTTGCACAGCACATTACATGTCACTGGACACCACAAAAAAGCAAAGGCCCACATGATTTCATTGCAAACATAAATATCAAACGTGCGTCCGTACTATCATAATATAAAGGGAAAGTATCTCGATGCACATGATATACAAACATGCATGAGGTCCCATGATTTACATTTCATGACATAATACTTAATACCTTTCATTACTCTTAGCATTTCATATTATAACTCATTTATTTCATATTATAACTCATTTATGGAACATTTATGCATGAAAACATTTTTCAATTCATTTCATGAAAATAGGGTAATGGATTACAGGCATACGTAGCAAATCTCTGATCAATACAAGAATACATAAATATTGCATAACTTAGACATTTCTATGGTACATAGGGCATACACCATCATACAATATACTAAGCTAACACCTACAGTGAGGTTTGGTTGACCTTGATCCAAGTTACTCACAGTAAGTTAAGTGCTAGAATTTATTTATTTTTGGAAAACCGAATCGTTACAATTAGGCTGATTATTCACCTTTTTTTTTCTTTCCATTTATCTTGTAAACCAAGTCATGAAGGCTACTTTACCGTTTGTTCATTGTTGGCCAATATTCTGACAATTTATTTTCCTCATAGCTGCTTTACATTTTCTGCCCATATTTAGCAGCTGACGAGGATTCTAGCCAATGTTTAAGATTTAGGCCATTGTGTTCATACAACATTCAGGACCTTGAAAAGTATTTTTATTTTGTTTAATCTTTCCTAGTAGAGAATTGGTGTTTTATGCATATGGAAGAATTTTGTATGTTGTATGTTTTATGCATCAATGAGGTACATTCAAGTCTTCACAGGAACAGTAGAAGACATTAAAAATGAGCAAGTACGGCCTACAACTTAGAGTTAAGCCATCACAGCAGAAACAGCCTACAAGACCGCCCCTTCCTGCTCCTCTTGGATTTCAAGACGACGACGACGACGATGTCGAGAGAGAGATATCCCGACAAGCTTCCAAGAATAAGGCACTTAAGGATGTAAGCTAGCTTATATATGTATGACTGTGTCATTAACACGAATATCATGGTCGTATGCTACCCTTAATTTTATTTTTCTCCCTTGAAATATCAATTTAGATCGAGGAGCAACACAAGAAAGCACTAGCGGAAGATCCGTCGGTTTTCGATTACGATGGAGTCTACGATGAAATGAAAGAAAAGGCTGTTCTACCTCGAGCATATGATCGTGAAGAGCGAAAGGTATGTTTATAATTTGATCCCAAACTTGTGTAAAAATACAGTATCACCCTAATGTAATGCTCTGCCAGTGTGGTGAAATTACTTATTTGCTCACTGCCTTTTCATATTGCAGCCAAAGTATATTCAAAATTTGATGAAGAAGGCAAAAGAGCGAGAGAGAGAACAGGAGGTTATATATGAAAGAAAACTAGCCAAGGAGAGAAGCAAAGATGATCATCTTTATGCTGGTAAGGACAAATTCGTCACTAGTGCCTACAAAAAGAAACTTGCAGAACAAGCTAAGTGGATGGAGGAAGAACGTCTCCGACAACTTCGAGAGGAGAAAGACGATGTATGTTTTAACTTTGCACTCTGTTTCTTTTTCTTTTCGTTTTATAGTTTTATAAGTTATTATACTTTGCTAAATGCCCTCCGTGACAAAATGAGCGAGTATAAGTTATTTGTGACTGTACGAGGAACATTGAACCTAACAAGGGTCCTAATATGCGACCACTAATAAGGGTCCTAATATAATCACAAAATGATTTAGGACAAAATGATTTAGGACCATGTTAGGAACATTGAAACATTCTTTGAAACATTCTTTATAATAGTGCGGAAATTTCTCTCTAGCAGACGAGTTTTAAAAATCTTGAGGGGAAGTCCGGAAGGGAAAGTCTAAAGAGGGCAATATCTGTTAGCGGTGGGCGAGGATCGTTACAGCAATCCATTATCTTGTTCTTGGGTTATCTTAAGAATTGCTTTATGCTTTTGTTAATGTGTGTTTTTCATTGACAGCCAATTATCTGATTGTTCTTTTTGTTCTAATTTGAAGGTTACCAAGAAGAGCGACATTAGCGACTTTTACTTCAACCTTCAAAAGAATATTGCCTACGGTGCCGGTAATGCAGTCGAGCCGAGGGAACCTCCACAGAAGCTTCAGTCAGAGAAGCAGGCTGAAGTCCAGAAATTGAAGAAGCATGAAGAGAGTGTTAATGCCGATATTGTTAATGATCATCAGTCACCGAAATACCCCAGCTCGCCTTCCCAGTCAGCAAAGACAATAGAACAGGATCGTCACCTCGAAGAGCACCTTTCGAATTCAAACAAAACAACACCTTCTGATGTACGAGGTACTAGCCCCCCTCCATTACACAATAAAACTCCAGTTGAGAAACAGCCCGAACATGACCAAGGTGAACAACAACCAAAGCGCGATCATCATAAAAGAAGTGAAGATGCTGTCGCTGCTGCAAAAGAGCGATTTTTGGCTCGAAAAAGAACAAAGGAGGTGTGAAATACTTGACCTGTATGGATTAACCTGAGGACAAATATGTAAATGTTATTGTTCTATGGATGATAGTTGATAGTTATGTTCTTAATGGTCAAATTCATCTTGGATCTCTGGCTTTGACATCACATTTTTGTTTCGTGGTTCATGTGAGAATCCTTGTGTTGAGATAACAAGGAGAGCAACGGATGAAGCCTGATGACGCAGCTGCTCGAAGTTGCAGCATCTTCGTCGAAAGTAAGTAAACCAAGTTCTCATTTGTTAAGTCATATAGGCATATTTCTTTCTCCACTGTTGTTTTCGGAAGAAACTTTTGGATAGGTATGCCACGTCTGAACGGAATTCTTTTTGGTTAAAGAATCTCTTTCAAGTTGCTCTGGAACCATTAAGAGATCTAGAAGGTCGTTTAGGCCTTGAATTTTGGACTTTCCATAAGTAGTCTGACCTTGCCGAAAGTAGGTCATAGGAGCAAATGAGTGACCTATTTTTGAGTCTCGAAGCAATATTTTCCTTAAATGCATATCCAGTTTATTCCAAACATCTCATTTTTCTCCTGAACCAAATCCTCATTAACCTCGATTTCTTATCTTTTCTTTTCCGAACCTATTCTATTGGCTGACATCCCTTATCTCTTAAAAGCAACAAGAAAGGAGTAGGATGCATGAACCTCCTAACATGTTTTATTGTTGCATTAAATGATGGGCGGTTGGTTGCGTGCAGAGGGAATGTCATTTTGAAACATGTGATTTAGATGTCAAGACATTGGACATCAATTCTTGTCTAGCACGCCAAATGACATAATAATTTATAATAAAGTAGGGAGCAAATCATTTAAAGCAAATCTTTTAATCTTATCATCAGCATATGGAATGATTCTGTTCTTTGTTAGAACCCGAAAACTGAACGAAGCTCATCAACGAACTCATACCATAAACACTCACTCAATTGGTTATTAACATACCTCACCAACTTTGCTTTGATGAGGAATGCTTACACGCATCTTTGTGGCCATAATATGCTCCTCTTGTTCAATAATACCACGTCTCTTATCATGGTCCAAGCTAGAGGTTGATGTTCATATCTATACAAGCCTAGTACCAAACAAGAAAAATTAAATGTATAAATTGATAAGACAATGAAAATTAATCGAGTTTGTTGATGAAAGAAACCATTTTCTGGTTCTGGAGAGTGAGAAAGAGTTGTGTACAACTTTTAAAAATTCAAACTCAATTAATTTCTTATAATTAATGATATAATTTTTTCTAAAAAATGAATTTGATACGTTTCTAGTAGTTTGTTTTTTTCTTTCCGAACATTTTGAATATTTTTTTGTTGTTGCTGTGTTTTATAGTCCTCGAACTTTTAATTATGTAATGGAATTAGTCTTGCACTGGATTCATCGGGCTCGGAGTCCAATGAATCAATAGTTAACCATTTTTTTAGGGATTGCTATCGCAAAGCTAGTCGATGTCTGCTGTAATGGTTGAAAATATCCAAACCTGCTCACCCACCCCACCTCATACGACTAGTTTGGGGGGAGGGGTTGGCTGTTCGCCTTTTGGAGACACCTAAAATCCTCACATTTGAAGGACGTTCTTTTATGAAAATTTCAATTTTTTTAAAATTAATTTGAATTTTACACTATGTCCAATAAATACGTCATTTTTCAGATATTTTAACATTTTGAATATTTTAAATTTTTTTAAAAAGATGCGAAGAACACCATATTTAAATAAGATGAACCCGGATATTGATTTGTGGTATGATTGGTGGTAGGTCACTGAACTTGATATGGTTGACAAGTCATATCATAAACTTGTGAATCAGAAGTCATATTGTATCCATATCAAAGGAGTTAATGAGTTGATTTTCAAAACCAAATTGGATATTCCTACCGGCAAAACTCAAAGGTCAATGTTCAAACTTTGTATTAAATGATAATTTAGACATTGTGAATTGTATACTCCATGTTTGGCCGTCTTTCCTCTCTTATAAATCATATACAGCTTCCAATTGTTGATACAAAGATTTGATCTTTCAATTCTTCCTTCTTCTTCGTTTCTCCGTTTTTCCATTGAAGAACTCTAAATTATGGGTCGAAATTTCAACCATCCAAAGTCAGAACCGATACTGCAAGATTTGTTTTTGGCAGGATCTAGCTCGAAAACTGAGGACGCTACGACATCGGTCATGGTGCTACTGGGATGTACTCAATGCCTTATGTACGTCATGTCGTCGAAGTTCGATCTCAAGTGTCCCAAATGTAATAACACTACGTTGCTCGATGTTCACAATTTGGCCAATCAAGCATCCAAGAAAAATCTTGTTGACATGTCAATCGACGTTGCTAAATGAGGAGTTTATCGACATGCCCATTGTAGTTACCTTCTTTACCTTTATGTATACTCTTTTACTTTCGTTTCTTAATTTAGCTTCCTCGTTCGAGCACTTTTTTTTCAATTCATTCTATGTCATGGTTTAAGGAACTATTTGATATTACTAGATATCTTCAAATCATGTCATATCATGTCAATTGATAATAATGAAAGATATATAT

mRNA sequence

ATGACGGACTGCGACCACCACCACCACCACGACTGCGAGCGCCGCCGTCTCTACCGCCGAATAGCCTGCGCCATCTTCACTGTCCTCCTCTTGATTAGCCTTGTCATCTTCCTCATCTGGGCTATCCTCCGGCCGTCCAAGCCCCGCCTCATTCTCCAAGACGTCACCGTTTTCGGCCTGAACGTCTCGTCGGTGCCACCGGCTGCCATCTCGATCACCATGCAGGTCACCATCTCCTCCCACAACCCCAACTCCCGCATCGGTGTTTACTACCAAACCATGGATGTTTACGCCGCCTACCGCGGCCAACAGGTCACTCTCCCGACGCTCTTGCCGCCGACTTACCAAGGCCACAATGATGTCACCGTTTGGTCGCCGTTTTTGTACGGCGAAGCTGTGCCGGTGGCGCCCGAGTTTGCTGAAGCTTTGAATGAGGATAATAACGTTGGAGCCATGCTGTTCAATATCAAGATCAATGGACAGGTTAGGTGGAAGGTTGGGAGCTGGATCTCAGGCAGGTATCGGTTGAACGCGAATTGTCCGGCGTATATAAAGTTCGGCGATCCAAAGAATGGGATTGCATTCGGACCGGCGATGAAGTTTCGAAAAAGAAAAAAACTCCTCCCTCGACCCTCAGTTTCACGGCGGCTCCCCCTCCTTCGGATCAGGCACCGCCGTTCTGCTCCCTTTTTCATCTCTGGATCTCAGAAGACATTAAAAATGAGCAAGTACGGCCTACAACTTAGAGTTAAGCCATCACAGCAGAAACAGCCTACAAGACCGCCCCTTCCTGCTCCTCTTGGATTTCAAGACGACGACGACGACGATGTCGAGAGAGAGATATCCCGACAAGCTTCCAAGAATAAGGCACTTAAGGATATCGAGGAGCAACACAAGAAAGCACTAGCGGAAGATCCGTCGGTTTTCGATTACGATGGAGTCTACGATGAAATGAAAGAAAAGGCTGTTCTACCTCGAGCATATGATCGTGAAGAGCGAAAGCCAAAGTATATTCAAAATTTGATGAAGAAGGCAAAAGAGCGAGAGAGAGAACAGGAGGTTATATATGAAAGAAAACTAGCCAAGGAGAGAAGCAAAGATGATCATCTTTATGCTGGTAAGGACAAATTCGTCACTAGTGCCTACAAAAAGAAACTTGCAGAACAAGCTAAGTGGATGGAGGAAGAACGTCTCCGACAACTTCGAGAGGAGAAAGACGATGTTACCAAGAAGAGCGACATTAGCGACTTTTACTTCAACCTTCAAAAGAATATTGCCTACGGTGCCGGTAATGCAGTCGAGCCGAGGGAACCTCCACAGAAGCTTCAGTCAGAGAAGCAGGCTGAAGTCCAGAAATTGAAGAAGCATGAAGAGAGTGTTAATGCCGATATTGTTAATGATCATCAGTCACCGAAATACCCCAGCTCGCCTTCCCAGTCAGCAAAGACAATAGAACAGGATCGTCACCTCGAAGAGCACCTTTCGAATTCAAACAAAACAACACCTTCTGATGTACGAGGTACTAGCCCCCCTCCATTACACAATAAAACTCCAGTTGAGAAACAGCCCGAACATGACCAAGGTGAACAACAACCAAAGCGCGATCATCATAAAAGAAGTGAAGATGCTGTCGCTGCTGCAAAAGAGCGATTTTTGGCTCGAAAAAGAACAAAGGAGGTCACTGAACTTGATATGGTTGACAAGTCATATCATAAACTTGTGAATCAGAAGTCATATTGTATCCATATCAAAGGAGTTAATGAGTTGATTTTCAAAACCAAATTGGATATTCCTACCGGCAAAACTCAAAGGTCAATGTTCAAACTTTGTATTAAATGATAATTTAGACATTGTGAATTGTATACTCCATGTTTGGCCGTCTTTCCTCTCTTATAAATCATATACAGCTTCCAATTGTTGATACAAAGATTTGATCTTTCAATTCTTCCTTCTTCTTCGTTTCTCCGTTTTTCCATTGAAGAACTCTAAATTATGGGTCGAAATTTCAACCATCCAAAGTCAGAACCGATACTGCAAGATTTGTTTTTGGCAGGATCTAGCTCGAAAACTGAGGACGCTACGACATCGGTCATGGTGCTACTGGGATGTACTCAATGCCTTATGTACGTCATGTCGTCGAAGTTCGATCTCAAGTGTCCCAAATGTAATAACACTACGTTGCTCGATGTTCACAATTTGGCCAATCAAGCATCCAAGAAAAATCTTGTTGACATGTCAATCGACGTTGCTAAATGAGGAGTTTATCGACATGCCCATTGTAGTTACCTTCTTTACCTTTATGTATACTCTTTTACTTTCGTTTCTTAATTTAGCTTCCTCGTTCGAGCACTTTTTTTTCAATTCATTCTATGTCATGGTTTAAGGAACTATTTGATATTACTAGATATCTTCAAATCATGTCATATCATGTCAATTGATAATAATGAAAGATATATAT

Coding sequence (CDS)

ATGACGGACTGCGACCACCACCACCACCACGACTGCGAGCGCCGCCGTCTCTACCGCCGAATAGCCTGCGCCATCTTCACTGTCCTCCTCTTGATTAGCCTTGTCATCTTCCTCATCTGGGCTATCCTCCGGCCGTCCAAGCCCCGCCTCATTCTCCAAGACGTCACCGTTTTCGGCCTGAACGTCTCGTCGGTGCCACCGGCTGCCATCTCGATCACCATGCAGGTCACCATCTCCTCCCACAACCCCAACTCCCGCATCGGTGTTTACTACCAAACCATGGATGTTTACGCCGCCTACCGCGGCCAACAGGTCACTCTCCCGACGCTCTTGCCGCCGACTTACCAAGGCCACAATGATGTCACCGTTTGGTCGCCGTTTTTGTACGGCGAAGCTGTGCCGGTGGCGCCCGAGTTTGCTGAAGCTTTGAATGAGGATAATAACGTTGGAGCCATGCTGTTCAATATCAAGATCAATGGACAGGTTAGGTGGAAGGTTGGGAGCTGGATCTCAGGCAGGTATCGGTTGAACGCGAATTGTCCGGCGTATATAAAGTTCGGCGATCCAAAGAATGGGATTGCATTCGGACCGGCGATGAAGTTTCGAAAAAGAAAAAAACTCCTCCCTCGACCCTCAGTTTCACGGCGGCTCCCCCTCCTTCGGATCAGGCACCGCCGTTCTGCTCCCTTTTTCATCTCTGGATCTCAGAAGACATTAAAAATGAGCAAGTACGGCCTACAACTTAGAGTTAAGCCATCACAGCAGAAACAGCCTACAAGACCGCCCCTTCCTGCTCCTCTTGGATTTCAAGACGACGACGACGACGATGTCGAGAGAGAGATATCCCGACAAGCTTCCAAGAATAAGGCACTTAAGGATATCGAGGAGCAACACAAGAAAGCACTAGCGGAAGATCCGTCGGTTTTCGATTACGATGGAGTCTACGATGAAATGAAAGAAAAGGCTGTTCTACCTCGAGCATATGATCGTGAAGAGCGAAAGCCAAAGTATATTCAAAATTTGATGAAGAAGGCAAAAGAGCGAGAGAGAGAACAGGAGGTTATATATGAAAGAAAACTAGCCAAGGAGAGAAGCAAAGATGATCATCTTTATGCTGGTAAGGACAAATTCGTCACTAGTGCCTACAAAAAGAAACTTGCAGAACAAGCTAAGTGGATGGAGGAAGAACGTCTCCGACAACTTCGAGAGGAGAAAGACGATGTTACCAAGAAGAGCGACATTAGCGACTTTTACTTCAACCTTCAAAAGAATATTGCCTACGGTGCCGGTAATGCAGTCGAGCCGAGGGAACCTCCACAGAAGCTTCAGTCAGAGAAGCAGGCTGAAGTCCAGAAATTGAAGAAGCATGAAGAGAGTGTTAATGCCGATATTGTTAATGATCATCAGTCACCGAAATACCCCAGCTCGCCTTCCCAGTCAGCAAAGACAATAGAACAGGATCGTCACCTCGAAGAGCACCTTTCGAATTCAAACAAAACAACACCTTCTGATGTACGAGGTACTAGCCCCCCTCCATTACACAATAAAACTCCAGTTGAGAAACAGCCCGAACATGACCAAGGTGAACAACAACCAAAGCGCGATCATCATAAAAGAAGTGAAGATGCTGTCGCTGCTGCAAAAGAGCGATTTTTGGCTCGAAAAAGAACAAAGGAGGTCACTGAACTTGATATGGTTGACAAGTCATATCATAAACTTGTGAATCAGAAGTCATATTGTATCCATATCAAAGGAGTTAATGAGTTGATTTTCAAAACCAAATTGGATATTCCTACCGGCAAAACTCAAAGGTCAATGTTCAAACTTTGTATTAAATGA

Protein sequence

MTDCDHHHHHDCERRRLYRRIACAIFTVLLLISLVIFLIWAILRPSKPRLILQDVTVFGLNVSSVPPAAISITMQVTISSHNPNSRIGVYYQTMDVYAAYRGQQVTLPTLLPPTYQGHNDVTVWSPFLYGEAVPVAPEFAEALNEDNNVGAMLFNIKINGQVRWKVGSWISGRYRLNANCPAYIKFGDPKNGIAFGPAMKFRKRKKLLPRPSVSRRLPLLRIRHRRSAPFFISGSQKTLKMSKYGLQLRVKPSQQKQPTRPPLPAPLGFQDDDDDDVEREISRQASKNKALKDIEEQHKKALAEDPSVFDYDGVYDEMKEKAVLPRAYDREERKPKYIQNLMKKAKEREREQEVIYERKLAKERSKDDHLYAGKDKFVTSAYKKKLAEQAKWMEEERLRQLREEKDDVTKKSDISDFYFNLQKNIAYGAGNAVEPREPPQKLQSEKQAEVQKLKKHEESVNADIVNDHQSPKYPSSPSQSAKTIEQDRHLEEHLSNSNKTTPSDVRGTSPPPLHNKTPVEKQPEHDQGEQQPKRDHHKRSEDAVAAAKERFLARKRTKEVTELDMVDKSYHKLVNQKSYCIHIKGVNELIFKTKLDIPTGKTQRSMFKLCIK

Homology

[Close]

BLAST of Cp4.1LG00g01670 vs. ExPASy Swiss-Prot
Match: Q9SRN0 (NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=NHL1 PE=2 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 6.3e-58
Identity = 106/196 (54.08%), Postives = 141/196 (71.94%), Query Frame = 0


Query: 1   MTDCDHHHHHDCERRRLYRRIACAIFTVLLLISLVIFLIWAILRPSKPRLILQDVTVFGL 60
           M DC++H H    RR+L RRI  +I  VL +I L I LIWAIL+PSKPR ILQD TV+  
Sbjct: 1   MKDCENHGH---SRRKLIRRIFWSIIFVLFIIFLTILLIWAILQPSKPRFILQDATVYAF 60

Query: 61  NVSSVPPAAISITMQVTISSHNPNSRIGVYYQTMDVYAAYRGQQVTLPTLLPPTYQGHND 120
           NVS  PP  ++   Q+T+SS NPN++IG+YY  +DVYA YR QQ+T PT +PPTYQGH D
Sbjct: 61  NVSGNPPNLLTSNFQITLSSRNPNNKIGIYYDRLDVYATYRSQQITFPTSIPPTYQGHKD 120

Query: 121 VTVWSPFLYGEAVPVAPEFAEALNEDNNVGAMLFNIKINGQVRWKVGSWISGRYRLNANC 180
           V +WSPF+YG +VP+AP    +L+ D + G +L  I+ +G+VRWKVG++I+G+Y L+  C
Sbjct: 121 VDIWSPFVYGTSVPIAPFNGVSLDTDKDNGVVLLIIRADGRVRWKVGTFITGKYHLHVKC 180

Query: 181 PAYIKFGDPKNGIAFG 197
           PAYI FG+  NG+  G
Sbjct: 181 PAYINFGNKANGVIVG 193

[Close]

BLAST of Cp4.1LG00g01670 vs. ExPASy Swiss-Prot
Match: Q9SJ54 (NDR1/HIN1-like protein 12 OS=Arabidopsis thaliana OX=3702 GN=NHL12 PE=2 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 4.0e-44
Identity = 85/177 (48.02%), Postives = 119/177 (67.23%), Query Frame = 0


Query: 20  RIACAIFTVLLLISLVIFLIWAILRPSKPRLILQDVTVFGLNVSSVPPAAISITMQVTIS 79
           RI   I   ++++ + IFL+W IL+P+KPR ILQD TV+  N+S   P  ++   Q+TI+
Sbjct: 20  RICGVIIGFIIIVLITIFLVWIILQPTKPRFILQDATVYAFNLSQ--PNLLTSNFQITIA 79

Query: 80  SHNPNSRIGVYYQTMDVYAAYRGQQVTLPTLLPPTYQGHNDVTVWSPFLYGEAVPVAPEF 139
           S N NSRIG+YY  + VYA YR QQ+TL T +PPTYQGH +  VWSPF+YG +VP+AP  
Sbjct: 80  SRNRNSRIGIYYDRLHVYATYRNQQITLRTAIPPTYQGHKEDNVWSPFVYGNSVPIAPFN 139

Query: 140 AEALNEDNNVGAMLFNIKINGQVRWKVGSWISGRYRLNANCPAYIKFGDPKNGIAFG 197
           A AL ++ N G +   I+ +G+VRWKVG+ I+G+Y L+  C A+I   D   G+  G
Sbjct: 140 AVALGDEQNRGFVTLIIRADGRVRWKVGTLITGKYHLHVRCQAFINLADKAAGVHVG 194

[Close]

BLAST of Cp4.1LG00g01670 vs. ExPASy Swiss-Prot
Match: Q9FI03 (NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana OX=3702 GN=NHL26 PE=2 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 4.4e-35
Identity = 62/154 (40.26%), Postives = 102/154 (66.23%), Query Frame = 0


Query: 34  LVIFLIWAILRPSKPRLILQDVTVFGLNVSSVPPAAISITMQVTISSHNPNSRIGVYYQT 93
           L+IFL+W IL P +P   L +  ++ LN+++     ++ ++Q+T+ S NPN ++G+YY  
Sbjct: 40  LIIFLVWLILHPERPEFSLTEADIYSLNLTTSSTHLLNSSVQLTLFSKNPNKKVGIYYDK 99

Query: 94  MDVYAAYRGQQVTLPTLLPPTYQGHNDVTVWSPFLYGEAVPVAPEFAEALNEDNNVGAML 153
           + VYAAYRGQQ+T    LPP YQ H ++ + + FL G  +PVA  F   ++ + + G ++
Sbjct: 100 LLVYAAYRGQQITSEASLPPFYQSHEEINLLTAFLQGTELPVAQSFGYQISRERSTGKII 159

Query: 154 FNIKINGQVRWKVGSWISGRYRLNANCPAYIKFG 188
             +K++G++RWK+G+W+SG YR N NC A + FG
Sbjct: 160 IGMKMDGKLRWKIGTWVSGAYRFNVNCLAIVAFG 193

[Close]

BLAST of Cp4.1LG00g01670 vs. ExPASy Swiss-Prot
Match: Q5NCR9 (Nuclear speckle splicing regulatory protein 1 OS=Mus musculus OX=10090 GN=Nsrp1 PE=1 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 2.1e-21
Identity = 102/331 (30.82%), Postives = 164/331 (49.55%), Query Frame = 0


Query: 243 KYGLQLRVKPSQQKQPTRPPLPAPLGFQDDDDDD---VEREISRQASKNKALKDIEEQHK 302
           +YGL L     ++ QP    L  P  F  D DDD   V   + R+A+K +A+K  + + +
Sbjct: 7   QYGLIL----PKKTQPLHRVLQKPSVFGSDSDDDETSVSESLQREAAKKQAMKQTKLEIQ 66

Query: 303 KALAEDPSVFDYDGVYDEMKEKAV--LPRAYDREERKPKYIQNLMKKAKEREREQEVIYE 362
           KALAED +V++YD VYDEM++K     P+    ++RKPKYI NL+K  + R++EQE   E
Sbjct: 67  KALAEDSTVYEYDSVYDEMQKKKEENNPKLLPGKDRKPKYIHNLLKAVEIRKKEQEKRME 126

Query: 363 RKLAKERSKDDHLYAGKDKFVTSAYKKKLAEQAKWMEEERLRQLREEKDDVTKKSDISDF 422
           +K+ +ER  ++  +  K+ FVTSAYKKKL E+A+  E E+     E   DVTK+ D+S F
Sbjct: 127 KKIQREREMENGEFDDKEAFVTSAYKKKLEERAEEEEREKRAAALEAHLDVTKQKDLSGF 186

Query: 423 YFNLQKNIAYGAGNAVEPREPPQKLQSEKQAEVQKLKKHEESVNADIVNDHQSPKYPSSP 482
           Y +L   +    G    P+   ++ ++  + E  KL+ + +  N++     QS       
Sbjct: 187 YRHL---LNQAVGEEAAPKSSFREARTVIKEE--KLRGYPDETNSESRPPQQSCVLQRGA 246

Query: 483 SQSAKTIEQDRHLEEHLSNSN-------KTTPSDVRGTSPPPLHNKTPVEKQ-------- 542
            ++ +  + DR  ++  S          K+   D   +   P H+K     +        
Sbjct: 247 QEAEENPDADREFDDESSEDGEKRDHKVKSRGEDTGASMKHPKHHKNRAHSRSSSEERGL 306

Query: 543 --PEHDQGEQQPKRDHHKR-SEDAVAAAKER 551
               H +G Q    +H  R S D  +  K+R
Sbjct: 307 GTKHHSRGSQSRGHEHQDRQSRDQESCHKDR 328

[Close]

BLAST of Cp4.1LG00g01670 vs. ExPASy Swiss-Prot
Match: Q2KIC0 (Nuclear speckle splicing regulatory protein 1 OS=Bos taurus OX=9913 GN=NSRP1 PE=2 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 5.2e-20
Identity = 109/387 (28.17%), Postives = 187/387 (48.32%), Query Frame = 0


Query: 243 KYGLQLRVKPSQQKQPTRPPLPAPLGFQDDDDDD---VEREISRQASKNKALKDIEEQHK 302
           +YGL L  K +QQ  P     P+  G   DDDDD   V   + R+A+K +A+K  + + +
Sbjct: 7   QYGLIL-PKKAQQLHPVLQK-PSVFGNDSDDDDDETSVSESLQREAAKKQAMKQTKLEIQ 66

Query: 303 KALAEDPSVFDYDGVYDEM--KEKAVLPRAYDREERKPKYIQNLMKKAKEREREQEVIYE 362
           KALAED +V++YD +YDEM  K++   P+    ++RKPKYI NL+K  + R++EQE   E
Sbjct: 67  KALAEDSTVYEYDSIYDEMQKKKEESNPKLLLGKDRKPKYIHNLLKAVEIRKKEQEKRME 126

Query: 363 RKLAKERSKDDHLYAGKDKFVTSAYKKKLAEQAKWMEEERLRQLREEKDDVTKKSDISDF 422
           +K+ +ER  +   +  K+ FVTSAYKKKL E+A+  E ER     E + DVTK+ D+S F
Sbjct: 127 KKIQREREMEKGEFDDKEAFVTSAYKKKLQERAEEEERERRAAALEARLDVTKQRDLSGF 186

Query: 423 YFNL------------------------QKNIAYGAGNAVEPREPPQK------LQSEKQ 482
           Y +L                        +K+  Y    + E R PP+       ++ E+ 
Sbjct: 187 YRHLLNQAVGEEEVPTCSFREARSEIKEEKSKGYSDEVSSESRIPPENCIRQTGVKVEEN 246

Query: 483 AEVQKLKKHEESVNADIVND-------------HQSPKYPSSPSQSAKTIEQDRHLEEHL 542
            +       + S N ++  D                 K+  +P++S  + E+  H  +  
Sbjct: 247 PDADSDFDAKSSENDEMEGDKGNCRREKGTETLSSHSKHHRNPARSPSSSEEREHGTQCH 306

Query: 543 SNSNKTTPSDVRGTSPPPLHNKTPVEKQPEH--DQGEQQPKRDHHKRSEDAVAAAKERFL 580
           + S+++   + R       H + P  +Q  +  D+  ++ KRD H+  E +   +  +  
Sbjct: 307 TKSSRSRGHEKREDE----HQERPAREQDSYHTDRDSRKEKRDSHRHRESSHRDSHWKRH 366

[Close]

BLAST of Cp4.1LG00g01670 vs. NCBI nr
Match: KAG6583699.1 (NDR1/HIN1-like protein 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 914 bits (2361), Expect = 0.0
Identity = 490/560 (87.50%), Postives = 495/560 (88.39%), Query Frame = 0


Query: 1   MTDCDHHHHHDCERRRLYRRIACAIFTVLLLISLVIFLIWAILRPSKPRLILQDVTVFGL 60
           + DCDHHHHHDCERRRLYRRIACAIFTVLLLISLVIFLIWAILRPSKPRLILQDVTVFGL
Sbjct: 3   VKDCDHHHHHDCERRRLYRRIACAIFTVLLLISLVIFLIWAILRPSKPRLILQDVTVFGL 62

Query: 61  NVSSVPPAAISITMQVTISSHNPNSRIGVYYQTMDVYAAYRGQQVTLPTLLPPTYQGHND 120
           NVSSVPPAAIS TMQVTISSHNPNSRIGVYYQ MDVYAAYRGQQVTLPTLLPPTYQGHND
Sbjct: 63  NVSSVPPAAISTTMQVTISSHNPNSRIGVYYQIMDVYAAYRGQQVTLPTLLPPTYQGHND 122

Query: 121 VTVWSPFLYGEAVPVAPEFAEALNEDNNVGAMLFNIKINGQVRWKVGSWISGRYRLNANC 180
           VTVWSPFLYGEAVPVAPEFAEALNEDNNVGAMLFNIKINGQVRWKVGSWISGRYRLNANC
Sbjct: 123 VTVWSPFLYGEAVPVAPEFAEALNEDNNVGAMLFNIKINGQVRWKVGSWISGRYRLNANC 182

Query: 181 PAYIKFGDPKNGIAFGPAMKFRKRKKLLPRPSVSRRLPLLRIRHRRSAPFFISGSQKTLK 240
           PAYIKFGDPKNGIAFGPAMKFR                            F+ G+   L 
Sbjct: 183 PAYIKFGDPKNGIAFGPAMKFR----------------------------FVQGTAVLLP 242

Query: 241 MSKYGLQLRVKPSQQKQPTRPPLPAPLGFQDDDDDDVEREISRQASKNKALKDIEEQHKK 300
            S   L LR                     +DDDDDVEREISRQASKNKALKDIEEQHKK
Sbjct: 243 FS--SLDLR--------------------NNDDDDDVEREISRQASKNKALKDIEEQHKK 302

Query: 301 ALAEDPSVFDYDGVYDEMKEKAVLPRAYDREERKPKYIQNLMKKAKEREREQEVIYERKL 360
           ALAEDPSVFDYDGVYDEMKEKAVLPRAYDREERKPKYIQNLMKKAKEREREQEVIYERKL
Sbjct: 303 ALAEDPSVFDYDGVYDEMKEKAVLPRAYDREERKPKYIQNLMKKAKEREREQEVIYERKL 362

Query: 361 AKERSKDDHLYAGKDKFVTSAYKKKLAEQAKWMEEERLRQLREEKDDVTKKSDISDFYFN 420
           AKERSKDDHLYAGKDKFVTSAYKKKLAEQAKWMEEERLRQLREEKDDVTKKSDISDFYFN
Sbjct: 363 AKERSKDDHLYAGKDKFVTSAYKKKLAEQAKWMEEERLRQLREEKDDVTKKSDISDFYFN 422

Query: 421 LQKNIAYGAGNAVEPREPPQKLQSEKQAEVQKLKKHEESVNADIVNDHQSPKYPSSPSQS 480
           LQKNIAYGAGNAVEPREP QKLQSEKQAEVQKLKKHEES NADIVNDHQSPKYPSSPSQS
Sbjct: 423 LQKNIAYGAGNAVEPREPLQKLQSEKQAEVQKLKKHEESANADIVNDHQSPKYPSSPSQS 482

Query: 481 AKTIEQDRHLEEHLSNSNKTTPSDVRGTSPPPLHNKTPVEKQPEHDQGEQQPKRDHHKRS 540
           AK IEQDRHLEEHLSNSNKTTPSDVRGTSPPPLHNKTPVEKQPEHDQGEQQPKRDHHKRS
Sbjct: 483 AKIIEQDRHLEEHLSNSNKTTPSDVRGTSPPPLHNKTPVEKQPEHDQGEQQPKRDHHKRS 512

Query: 541 EDAVAAAKERFLARKRTKEV 560
           E+AVAAAKERFLARKRTKEV
Sbjct: 543 ENAVAAAKERFLARKRTKEV 512

[Close]

BLAST of Cp4.1LG00g01670 vs. NCBI nr
Match: XP_023520694.1 (nuclear speckle splicing regulatory protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 599 bits (1545), Expect = 1.37e-210
Identity = 320/320 (100.00%), Postives = 320/320 (100.00%), Query Frame = 0


Query: 241 MSKYGLQLRVKPSQQKQPTRPPLPAPLGFQDDDDDDVEREISRQASKNKALKDIEEQHKK 300
           MSKYGLQLRVKPSQQKQPTRPPLPAPLGFQDDDDDDVEREISRQASKNKALKDIEEQHKK
Sbjct: 1   MSKYGLQLRVKPSQQKQPTRPPLPAPLGFQDDDDDDVEREISRQASKNKALKDIEEQHKK 60

Query: 301 ALAEDPSVFDYDGVYDEMKEKAVLPRAYDREERKPKYIQNLMKKAKEREREQEVIYERKL 360
           ALAEDPSVFDYDGVYDEMKEKAVLPRAYDREERKPKYIQNLMKKAKEREREQEVIYERKL
Sbjct: 61  ALAEDPSVFDYDGVYDEMKEKAVLPRAYDREERKPKYIQNLMKKAKEREREQEVIYERKL 120

Query: 361 AKERSKDDHLYAGKDKFVTSAYKKKLAEQAKWMEEERLRQLREEKDDVTKKSDISDFYFN 420
           AKERSKDDHLYAGKDKFVTSAYKKKLAEQAKWMEEERLRQLREEKDDVTKKSDISDFYFN
Sbjct: 121 AKERSKDDHLYAGKDKFVTSAYKKKLAEQAKWMEEERLRQLREEKDDVTKKSDISDFYFN 180

Query: 421 LQKNIAYGAGNAVEPREPPQKLQSEKQAEVQKLKKHEESVNADIVNDHQSPKYPSSPSQS 480
           LQKNIAYGAGNAVEPREPPQKLQSEKQAEVQKLKKHEESVNADIVNDHQSPKYPSSPSQS
Sbjct: 181 LQKNIAYGAGNAVEPREPPQKLQSEKQAEVQKLKKHEESVNADIVNDHQSPKYPSSPSQS 240

Query: 481 AKTIEQDRHLEEHLSNSNKTTPSDVRGTSPPPLHNKTPVEKQPEHDQGEQQPKRDHHKRS 540
           AKTIEQDRHLEEHLSNSNKTTPSDVRGTSPPPLHNKTPVEKQPEHDQGEQQPKRDHHKRS
Sbjct: 241 AKTIEQDRHLEEHLSNSNKTTPSDVRGTSPPPLHNKTPVEKQPEHDQGEQQPKRDHHKRS 300

Query: 541 EDAVAAAKERFLARKRTKEV 560
           EDAVAAAKERFLARKRTKEV
Sbjct: 301 EDAVAAAKERFLARKRTKEV 320

[Close]

BLAST of Cp4.1LG00g01670 vs. NCBI nr
Match: XP_022927406.1 (nuclear speckle splicing regulatory protein 1-like [Cucurbita moschata] >XP_022927407.1 nuclear speckle splicing regulatory protein 1-like [Cucurbita moschata])

HSP 1 Score: 597 bits (1538), Expect = 1.59e-209
Identity = 318/320 (99.38%), Postives = 319/320 (99.69%), Query Frame = 0


Query: 241 MSKYGLQLRVKPSQQKQPTRPPLPAPLGFQDDDDDDVEREISRQASKNKALKDIEEQHKK 300
           MSKYGLQLRVKPSQQKQPTRPPLPAPLGFQDDDDDDVEREISRQASKNKALKDIEEQHKK
Sbjct: 1   MSKYGLQLRVKPSQQKQPTRPPLPAPLGFQDDDDDDVEREISRQASKNKALKDIEEQHKK 60

Query: 301 ALAEDPSVFDYDGVYDEMKEKAVLPRAYDREERKPKYIQNLMKKAKEREREQEVIYERKL 360
           ALAEDPSVFDYDGVYDEMKEKAVLPRAYDREERKPKYIQNLMKKAKEREREQEVIYERKL
Sbjct: 61  ALAEDPSVFDYDGVYDEMKEKAVLPRAYDREERKPKYIQNLMKKAKEREREQEVIYERKL 120

Query: 361 AKERSKDDHLYAGKDKFVTSAYKKKLAEQAKWMEEERLRQLREEKDDVTKKSDISDFYFN 420
           AKERSKDDHLYAGKDKFVTSAYKKKLAEQAKWMEEERLRQLREEKDDVTKKSDISDFYFN
Sbjct: 121 AKERSKDDHLYAGKDKFVTSAYKKKLAEQAKWMEEERLRQLREEKDDVTKKSDISDFYFN 180

Query: 421 LQKNIAYGAGNAVEPREPPQKLQSEKQAEVQKLKKHEESVNADIVNDHQSPKYPSSPSQS 480
           LQKNIAYGAGNAVEPREPPQKLQSEKQAEVQKLKKHEES NADIVNDHQSPKYPSSPSQS
Sbjct: 181 LQKNIAYGAGNAVEPREPPQKLQSEKQAEVQKLKKHEESANADIVNDHQSPKYPSSPSQS 240

Query: 481 AKTIEQDRHLEEHLSNSNKTTPSDVRGTSPPPLHNKTPVEKQPEHDQGEQQPKRDHHKRS 540
           AKTIEQDRHLEEHLSNSNKTTPSDVRGTSPPPLHN+TPVEKQPEHDQGEQQPKRDHHKRS
Sbjct: 241 AKTIEQDRHLEEHLSNSNKTTPSDVRGTSPPPLHNRTPVEKQPEHDQGEQQPKRDHHKRS 300

Query: 541 EDAVAAAKERFLARKRTKEV 560
           EDAVAAAKERFLARKRTKEV
Sbjct: 301 EDAVAAAKERFLARKRTKEV 320

[Close]

BLAST of Cp4.1LG00g01670 vs. NCBI nr
Match: XP_022973152.1 (nuclear speckle splicing regulatory protein 1-like [Cucurbita maxima] >XP_022973153.1 nuclear speckle splicing regulatory protein 1-like [Cucurbita maxima] >XP_022973154.1 nuclear speckle splicing regulatory protein 1-like [Cucurbita maxima])

HSP 1 Score: 593 bits (1529), Expect = 3.69e-208
Identity = 316/320 (98.75%), Postives = 318/320 (99.38%), Query Frame = 0


Query: 241 MSKYGLQLRVKPSQQKQPTRPPLPAPLGFQDDDDDDVEREISRQASKNKALKDIEEQHKK 300
           MSKYGLQLRVKPSQQKQPTRPPLPAPLGFQDDDDDDVEREISRQASKNKALKDIEEQHKK
Sbjct: 1   MSKYGLQLRVKPSQQKQPTRPPLPAPLGFQDDDDDDVEREISRQASKNKALKDIEEQHKK 60

Query: 301 ALAEDPSVFDYDGVYDEMKEKAVLPRAYDREERKPKYIQNLMKKAKEREREQEVIYERKL 360
           ALAEDPSVFDYDGVYDEMKEKAVLPRAYDREERKPKYIQNLMKKAKEREREQEVIYERKL
Sbjct: 61  ALAEDPSVFDYDGVYDEMKEKAVLPRAYDREERKPKYIQNLMKKAKEREREQEVIYERKL 120

Query: 361 AKERSKDDHLYAGKDKFVTSAYKKKLAEQAKWMEEERLRQLREEKDDVTKKSDISDFYFN 420
           AKERSKDDHLYAGKDKFVTSAYKKKLAEQAKWMEEERLRQLREEKDDVTKKSDISDFYFN
Sbjct: 121 AKERSKDDHLYAGKDKFVTSAYKKKLAEQAKWMEEERLRQLREEKDDVTKKSDISDFYFN 180

Query: 421 LQKNIAYGAGNAVEPREPPQKLQSEKQAEVQKLKKHEESVNADIVNDHQSPKYPSSPSQS 480
           LQKNIAYGAGNAVEPREPPQKLQSEKQA+VQK+KKH ES NADIVNDHQSPKYPSSPSQS
Sbjct: 181 LQKNIAYGAGNAVEPREPPQKLQSEKQADVQKMKKHGESANADIVNDHQSPKYPSSPSQS 240

Query: 481 AKTIEQDRHLEEHLSNSNKTTPSDVRGTSPPPLHNKTPVEKQPEHDQGEQQPKRDHHKRS 540
           AKTIEQDRHLEEHLSNSNKTTPSDVRGTSPPPLHNKTPVEKQPEHDQGEQQPKRDHHKRS
Sbjct: 241 AKTIEQDRHLEEHLSNSNKTTPSDVRGTSPPPLHNKTPVEKQPEHDQGEQQPKRDHHKRS 300

Query: 541 EDAVAAAKERFLARKRTKEV 560
           EDAVAAAKERFLARKRTKEV
Sbjct: 301 EDAVAAAKERFLARKRTKEV 320

[Close]

BLAST of Cp4.1LG00g01670 vs. NCBI nr
Match: XP_038877232.1 (nuclear speckle splicing regulatory protein 1-like [Benincasa hispida] >XP_038877234.1 nuclear speckle splicing regulatory protein 1-like [Benincasa hispida] >XP_038877235.1 nuclear speckle splicing regulatory protein 1-like [Benincasa hispida])

HSP 1 Score: 507 bits (1306), Expect = 2.77e-174
Identity = 277/322 (86.02%), Postives = 293/322 (90.99%), Query Frame = 0


Query: 241 MSKYGLQLRVKPSQQKQPTRPPLPAPLGFQDDDDDDVEREISRQASKNKALKDIEEQHKK 300
           MSKYGLQLRVKPSQQKQPTRPPLPAPLGFQDDDDDDVEREISRQASKNKALKDIE+QH+K
Sbjct: 1   MSKYGLQLRVKPSQQKQPTRPPLPAPLGFQDDDDDDVEREISRQASKNKALKDIEDQHRK 60

Query: 301 ALAEDPSVFDYDGVYDEMKEKAVLPRAYDREERKPKYIQNLMKKAKEREREQEVIYERKL 360
           AL EDPSVFDYDGVYD+MKEKAV PRAYDREERKPKYIQNLMKKA+EREREQE+IYERKL
Sbjct: 61  ALEEDPSVFDYDGVYDQMKEKAVQPRAYDREERKPKYIQNLMKKAQEREREQEIIYERKL 120

Query: 361 AKERSKDDHLYAGKDKFVTSAYKKKLAEQAKWMEEERLRQLREEKDDVTKKSDISDFYFN 420
           AKERSKDDHLYAGKDKFVTSAYKKKLAEQAKWMEEERLRQLREEK+DVTKKSDI+DFYFN
Sbjct: 121 AKERSKDDHLYAGKDKFVTSAYKKKLAEQAKWMEEERLRQLREEKEDVTKKSDITDFYFN 180

Query: 421 LQKNIAYGAGNAVEPREPPQKLQSEKQ---AEVQKLKKHEESVNADIVNDHQSPKYPSSP 480
           LQKNIAYGA NA+EPREPP KL SEKQ    EV   +KHEE  NAD  NDHQS KY + P
Sbjct: 181 LQKNIAYGARNAIEPREPPNKLLSEKQEKQTEVHISEKHEEGANADTFNDHQSLKYSNLP 240

Query: 481 SQSAKTIEQDRHLEEHLSNSNKTTPSDVRGTSPPPLHNKTPVEKQPEHDQGEQQPKRDHH 540
           SQSAKT E+   LEEHLS SNKTTPSDVRG SP  + NKTPVE+QP+H+QGEQQPKRDHH
Sbjct: 241 SQSAKTREEHPRLEEHLSVSNKTTPSDVRGNSPRTICNKTPVEEQPKHEQGEQQPKRDHH 300

Query: 541 KRSEDAVAAAKERFLARKRTKE 559
           KR+EDAVAAAKERFLARKR KE
Sbjct: 301 KRNEDAVAAAKERFLARKRAKE 322

[Close]

BLAST of Cp4.1LG00g01670 vs. ExPASy TrEMBL
Match: A0A6J1EHK7 (nuclear speckle splicing regulatory protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111434242 PE=3 SV=1)

HSP 1 Score: 597 bits (1538), Expect = 7.69e-210
Identity = 318/320 (99.38%), Postives = 319/320 (99.69%), Query Frame = 0


Query: 241 MSKYGLQLRVKPSQQKQPTRPPLPAPLGFQDDDDDDVEREISRQASKNKALKDIEEQHKK 300
           MSKYGLQLRVKPSQQKQPTRPPLPAPLGFQDDDDDDVEREISRQASKNKALKDIEEQHKK
Sbjct: 1   MSKYGLQLRVKPSQQKQPTRPPLPAPLGFQDDDDDDVEREISRQASKNKALKDIEEQHKK 60

Query: 301 ALAEDPSVFDYDGVYDEMKEKAVLPRAYDREERKPKYIQNLMKKAKEREREQEVIYERKL 360
           ALAEDPSVFDYDGVYDEMKEKAVLPRAYDREERKPKYIQNLMKKAKEREREQEVIYERKL
Sbjct: 61  ALAEDPSVFDYDGVYDEMKEKAVLPRAYDREERKPKYIQNLMKKAKEREREQEVIYERKL 120

Query: 361 AKERSKDDHLYAGKDKFVTSAYKKKLAEQAKWMEEERLRQLREEKDDVTKKSDISDFYFN 420
           AKERSKDDHLYAGKDKFVTSAYKKKLAEQAKWMEEERLRQLREEKDDVTKKSDISDFYFN
Sbjct: 121 AKERSKDDHLYAGKDKFVTSAYKKKLAEQAKWMEEERLRQLREEKDDVTKKSDISDFYFN 180

Query: 421 LQKNIAYGAGNAVEPREPPQKLQSEKQAEVQKLKKHEESVNADIVNDHQSPKYPSSPSQS 480
           LQKNIAYGAGNAVEPREPPQKLQSEKQAEVQKLKKHEES NADIVNDHQSPKYPSSPSQS
Sbjct: 181 LQKNIAYGAGNAVEPREPPQKLQSEKQAEVQKLKKHEESANADIVNDHQSPKYPSSPSQS 240

Query: 481 AKTIEQDRHLEEHLSNSNKTTPSDVRGTSPPPLHNKTPVEKQPEHDQGEQQPKRDHHKRS 540
           AKTIEQDRHLEEHLSNSNKTTPSDVRGTSPPPLHN+TPVEKQPEHDQGEQQPKRDHHKRS
Sbjct: 241 AKTIEQDRHLEEHLSNSNKTTPSDVRGTSPPPLHNRTPVEKQPEHDQGEQQPKRDHHKRS 300

Query: 541 EDAVAAAKERFLARKRTKEV 560
           EDAVAAAKERFLARKRTKEV
Sbjct: 301 EDAVAAAKERFLARKRTKEV 320

[Close]

BLAST of Cp4.1LG00g01670 vs. ExPASy TrEMBL
Match: A0A6J1I6R6 (nuclear speckle splicing regulatory protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111471664 PE=3 SV=1)

HSP 1 Score: 593 bits (1529), Expect = 1.79e-208
Identity = 316/320 (98.75%), Postives = 318/320 (99.38%), Query Frame = 0


Query: 241 MSKYGLQLRVKPSQQKQPTRPPLPAPLGFQDDDDDDVEREISRQASKNKALKDIEEQHKK 300
           MSKYGLQLRVKPSQQKQPTRPPLPAPLGFQDDDDDDVEREISRQASKNKALKDIEEQHKK
Sbjct: 1   MSKYGLQLRVKPSQQKQPTRPPLPAPLGFQDDDDDDVEREISRQASKNKALKDIEEQHKK 60

Query: 301 ALAEDPSVFDYDGVYDEMKEKAVLPRAYDREERKPKYIQNLMKKAKEREREQEVIYERKL 360
           ALAEDPSVFDYDGVYDEMKEKAVLPRAYDREERKPKYIQNLMKKAKEREREQEVIYERKL
Sbjct: 61  ALAEDPSVFDYDGVYDEMKEKAVLPRAYDREERKPKYIQNLMKKAKEREREQEVIYERKL 120

Query: 361 AKERSKDDHLYAGKDKFVTSAYKKKLAEQAKWMEEERLRQLREEKDDVTKKSDISDFYFN 420
           AKERSKDDHLYAGKDKFVTSAYKKKLAEQAKWMEEERLRQLREEKDDVTKKSDISDFYFN
Sbjct: 121 AKERSKDDHLYAGKDKFVTSAYKKKLAEQAKWMEEERLRQLREEKDDVTKKSDISDFYFN 180

Query: 421 LQKNIAYGAGNAVEPREPPQKLQSEKQAEVQKLKKHEESVNADIVNDHQSPKYPSSPSQS 480
           LQKNIAYGAGNAVEPREPPQKLQSEKQA+VQK+KKH ES NADIVNDHQSPKYPSSPSQS
Sbjct: 181 LQKNIAYGAGNAVEPREPPQKLQSEKQADVQKMKKHGESANADIVNDHQSPKYPSSPSQS 240

Query: 481 AKTIEQDRHLEEHLSNSNKTTPSDVRGTSPPPLHNKTPVEKQPEHDQGEQQPKRDHHKRS 540
           AKTIEQDRHLEEHLSNSNKTTPSDVRGTSPPPLHNKTPVEKQPEHDQGEQQPKRDHHKRS
Sbjct: 241 AKTIEQDRHLEEHLSNSNKTTPSDVRGTSPPPLHNKTPVEKQPEHDQGEQQPKRDHHKRS 300

Query: 541 EDAVAAAKERFLARKRTKEV 560
           EDAVAAAKERFLARKRTKEV
Sbjct: 301 EDAVAAAKERFLARKRTKEV 320

[Close]

BLAST of Cp4.1LG00g01670 vs. ExPASy TrEMBL
Match: A0A0A0LJE9 (DUF2040 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G070270 PE=3 SV=1)

HSP 1 Score: 484 bits (1246), Expect = 1.58e-165
Identity = 267/325 (82.15%), Postives = 286/325 (88.00%), Query Frame = 0


Query: 241 MSKYGLQLRVKPSQQKQPTRPPLPAPLGFQDDDDDDVEREISRQASKNKALKDIEEQHKK 300
           MSKYGLQLRVKPSQQKQPTRPPLPAPLGFQDDDDDDVEREISRQASKNKALKDIEEQHKK
Sbjct: 1   MSKYGLQLRVKPSQQKQPTRPPLPAPLGFQDDDDDDVEREISRQASKNKALKDIEEQHKK 60

Query: 301 ALAEDPSVFDYDGVYDEMKEKAVLPRAYDREERKPKYIQNLMKKAKEREREQEVIYERKL 360
           AL EDPSVFDYDGVYDEMKEK V PRAYDREERKPKYIQNLMKKA+EREREQE+IYERKL
Sbjct: 61  ALEEDPSVFDYDGVYDEMKEKVVQPRAYDREERKPKYIQNLMKKAQEREREQEIIYERKL 120

Query: 361 AKERSKDDHLYAGKDKFVTSAYKKKLAEQAKWMEEERLRQLREEKDDVTKKSDISDFYFN 420
           AKERSKDDHLYAGKDKFVT AYKKKLAEQAKWMEEERLRQLREEK+DVTKKSD+SDFYF+
Sbjct: 121 AKERSKDDHLYAGKDKFVTGAYKKKLAEQAKWMEEERLRQLREEKEDVTKKSDMSDFYFS 180

Query: 421 LQKNIAYGAGNAVEPREPPQKLQ---SEKQAEVQKLKKHEESVNADIVNDH--QSPKYPS 480
           LQKN+AYGA NA+EP  PP+KLQ    EKQ EV  L+KHEES N D  NDH  Q+   PS
Sbjct: 181 LQKNVAYGARNAIEPTAPPKKLQLEKKEKQTEVHILEKHEESCNGDTFNDHLLQNSNLPS 240

Query: 481 SPSQSAKTIEQDRHLEEHLSNSNKTTPSDVRGTSPPPLHNKTPVEKQPEHDQGEQQPKRD 540
               S KTIE+  HLEE L  SNKTTPS++ GTSPP LH+KTPV++QP+H+Q EQ PK D
Sbjct: 241 C---SEKTIEEHPHLEERLPFSNKTTPSNIEGTSPPTLHDKTPVQEQPKHEQSEQPPKSD 300

Query: 541 HHKRSEDAVAAAKERFLARKRTKEV 560
           HHKR+EDAVAAAKERFLARKR KEV
Sbjct: 301 HHKRNEDAVAAAKERFLARKRAKEV 322

[Close]

BLAST of Cp4.1LG00g01670 vs. ExPASy TrEMBL
Match: A0A1S3BQM2 (nuclear speckle splicing regulatory protein 1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492150 PE=3 SV=1)

HSP 1 Score: 482 bits (1240), Expect = 1.53e-164
Identity = 267/333 (80.18%), Postives = 289/333 (86.79%), Query Frame = 0


Query: 231 FISGSQKTLKMSKYGLQLRVKPSQQKQPTRPPLPAPLGFQDDDDDDVEREISRQASKNKA 290
           F S   +  KMSKYGLQLRVKPSQQKQP RPPLPAPLGFQDDDDD+VEREISRQASKNKA
Sbjct: 3   FSSEGLEDSKMSKYGLQLRVKPSQQKQPKRPPLPAPLGFQDDDDDNVEREISRQASKNKA 62

Query: 291 LKDIEEQHKKALAEDPSVFDYDGVYDEMKEKAVLPRAYDREERKPKYIQNLMKKAKERER 350
           LKDIEEQHKKAL EDPSVFDYDGVYDEMKEKAV PRAYDREERKPKYIQNLMKKA+ERER
Sbjct: 63  LKDIEEQHKKALEEDPSVFDYDGVYDEMKEKAVQPRAYDREERKPKYIQNLMKKAQERER 122

Query: 351 EQEVIYERKLAKERSKDDHLYAGKDKFVTSAYKKKLAEQAKWMEEERLRQLREEKDDVTK 410
           EQE+IYERKLAKERSKDDHLYAGKDKFVTSAYKKKLAEQAKWMEEERLRQLREEK+DVTK
Sbjct: 123 EQEIIYERKLAKERSKDDHLYAGKDKFVTSAYKKKLAEQAKWMEEERLRQLREEKEDVTK 182

Query: 411 KSDISDFYFNLQKNIAYGAGNAVEPREPPQKLQ---SEKQAEVQKLKKHEESVNADIVND 470
           KSD+SDFYF+LQKN+AYGA NA+EPR  P+KLQ    EKQ EV  L+KHEES N D  ND
Sbjct: 183 KSDMSDFYFSLQKNVAYGARNAIEPRATPKKLQLEKKEKQTEVHILEKHEESCNGDTFND 242

Query: 471 HQSPKYPSSPSQSAKTIEQDRHLEEHLSNSNKTTPSDVRGTSPPPLHNKTPVEKQPEHDQ 530
           HQ         Q++KTIE+  HLEE LS SNKTTPSD+ GTSPP LH+K  V+++P+H+ 
Sbjct: 243 HQL--------QNSKTIEEHSHLEERLSASNKTTPSDIEGTSPPTLHDKALVQERPKHEL 302

Query: 531 GEQQPKRDHHKRSEDAVAAAKERFLARKRTKEV 560
            EQ PKRDHHKR+EDAVAAAKERFLARKR KEV
Sbjct: 303 SEQPPKRDHHKRNEDAVAAAKERFLARKRAKEV 327

[Close]

BLAST of Cp4.1LG00g01670 vs. ExPASy TrEMBL
Match: A0A1S4E1R3 (nuclear speckle splicing regulatory protein 1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103492150 PE=3 SV=1)

HSP 1 Score: 479 bits (1234), Expect = 8.05e-164
Identity = 264/323 (81.73%), Postives = 285/323 (88.24%), Query Frame = 0


Query: 241 MSKYGLQLRVKPSQQKQPTRPPLPAPLGFQDDDDDDVEREISRQASKNKALKDIEEQHKK 300
           MSKYGLQLRVKPSQQKQP RPPLPAPLGFQDDDDD+VEREISRQASKNKALKDIEEQHKK
Sbjct: 1   MSKYGLQLRVKPSQQKQPKRPPLPAPLGFQDDDDDNVEREISRQASKNKALKDIEEQHKK 60

Query: 301 ALAEDPSVFDYDGVYDEMKEKAVLPRAYDREERKPKYIQNLMKKAKEREREQEVIYERKL 360
           AL EDPSVFDYDGVYDEMKEKAV PRAYDREERKPKYIQNLMKKA+EREREQE+IYERKL
Sbjct: 61  ALEEDPSVFDYDGVYDEMKEKAVQPRAYDREERKPKYIQNLMKKAQEREREQEIIYERKL 120

Query: 361 AKERSKDDHLYAGKDKFVTSAYKKKLAEQAKWMEEERLRQLREEKDDVTKKSDISDFYFN 420
           AKERSKDDHLYAGKDKFVTSAYKKKLAEQAKWMEEERLRQLREEK+DVTKKSD+SDFYF+
Sbjct: 121 AKERSKDDHLYAGKDKFVTSAYKKKLAEQAKWMEEERLRQLREEKEDVTKKSDMSDFYFS 180

Query: 421 LQKNIAYGAGNAVEPREPPQKLQ---SEKQAEVQKLKKHEESVNADIVNDHQSPKYPSSP 480
           LQKN+AYGA NA+EPR  P+KLQ    EKQ EV  L+KHEES N D  NDHQ        
Sbjct: 181 LQKNVAYGARNAIEPRATPKKLQLEKKEKQTEVHILEKHEESCNGDTFNDHQL------- 240

Query: 481 SQSAKTIEQDRHLEEHLSNSNKTTPSDVRGTSPPPLHNKTPVEKQPEHDQGEQQPKRDHH 540
            Q++KTIE+  HLEE LS SNKTTPSD+ GTSPP LH+K  V+++P+H+  EQ PKRDHH
Sbjct: 241 -QNSKTIEEHSHLEERLSASNKTTPSDIEGTSPPTLHDKALVQERPKHELSEQPPKRDHH 300

Query: 541 KRSEDAVAAAKERFLARKRTKEV 560
           KR+EDAVAAAKERFLARKR KEV
Sbjct: 301 KRNEDAVAAAKERFLARKRAKEV 315

[Close]

BLAST of Cp4.1LG00g01670 vs. TAIR 10
Match: AT2G27285.1 (Coiled-coil domain-containing protein 55 (DUF2040) )

HSP 1 Score: 267.3 bits (682), Expect = 3.0e-71
Identity = 169/335 (50.45%), Postives = 226/335 (67.46%), Query Frame = 0


Query: 241 MSKYGLQLRVKPSQQKQ-PTRPPLPAPLGFQDDDDDDVEREISRQASKNKALKDIEEQHK 300
           M KYGLQ+R  PSQ+KQ  +RPPL     F +++D DVE+EISRQA+K KA K+IEEQHK
Sbjct: 1   MKKYGLQIRA-PSQKKQSSSRPPLRPASIFDEEEDHDVEKEISRQATKTKAHKEIEEQHK 60

Query: 301 KALAEDPSVFDYDGVYDEMKEKAVLPRAYDREERKPKYIQNLMKKAKEREREQEVIYERK 360
           KAL EDPS F YD VYD+MK+KAVLPR  DREERKP+YIQNLMK+A+ RE+E E++YERK
Sbjct: 61  KALEEDPSAFSYDEVYDDMKQKAVLPRMQDREERKPRYIQNLMKQAERREKEHEIVYERK 120

Query: 361 LAKERSKDDHLYAGKDKFVTSAYKKKLAEQAKWMEEERLRQLREEKDDVTKKSDISDFYF 420
           LAKER KD+HL++ K+KFVT AYK+KL EQ KW+ EERLR+LREE+DDVTKK D+SDFYF
Sbjct: 121 LAKEREKDEHLFSDKEKFVTGAYKRKLEEQKKWLAEERLRELREERDDVTKKKDLSDFYF 180

Query: 421 NLQKNIAYGA-------GNAVEPREPPQKLQSEKQA--------EVQKLKKHEESVNADI 480
           N+ KN+A+GA          +E +   +KL+ +++A        EV +++K  +S   ++
Sbjct: 181 NIGKNVAFGAREVEAKEAEKLEEQRKAEKLEEQRKAEKLEELRKEVTRVEKKRKSPEKEV 240

Query: 481 VNDHQSPKYPSSPSQSAKTIEQDRHLEEHLSNSNKTTPSDVRGTSPPPLHNKTPVEKQPE 540
             D  S ++ SS S+S + +E ++ + E    S+ T                    K   
Sbjct: 241 SPD--SGEFGSSRSKSLEPLEAEQAVSEKEMGSDGTEE-----------------RKSSI 300

Query: 541 HDQGEQQPKR-DHHKRSEDAVAAAKERFLARKRTK 559
            +  ++ PK  +  KR EDA+AAAKERFLARK+ K
Sbjct: 301 KEAAKEVPKAINDQKRREDAIAAAKERFLARKKAK 315

[Close]

BLAST of Cp4.1LG00g01670 vs. TAIR 10
Match: AT2G27280.1 (Coiled-coil domain-containing protein 55 (DUF2040) )

HSP 1 Score: 239.6 bits (610), Expect = 6.7e-63
Identity = 152/328 (46.34%), Postives = 210/328 (64.02%), Query Frame = 0


Query: 233 SGSQKTLKMSKYGLQLRVKPSQQKQPTRPPL--PAPLGFQDDDDDDVEREISRQASKNKA 292
           S  Q T+K+ KYGLQ+R  PSQ+KQ +  PL   A +  +DD+++DVE+EISRQASK K+
Sbjct: 134 SVKQATVKIKKYGLQIRA-PSQKKQSSSRPLLRTASIFGEDDEENDVEKEISRQASKTKS 193

Query: 293 LKDIEEQHKKALAEDPSVFDYDGVYDEMKEKAVLPRAYDREERKPKYIQNLMKKAKERER 352
           LK IE+QHKKA+ EDPS F YD VYD++K +A LPR  DREE K +YIQ++MK+A+ RE+
Sbjct: 194 LKKIEKQHKKAIEEDPSAFAYDEVYDDIKHEAALPRMQDREEHKSRYIQHIMKQAERREK 253

Query: 353 EQEVIYERKLAKERSKDDHLYAGKDKFVTSAYKKKLAEQAKWMEEERLRQLREEKDDVTK 412
           E E++YERKLAKER+KD+HLY+ K+KFVT  +K+KL EQ KW+EEERLR+LREE+DDVTK
Sbjct: 254 EHEIVYERKLAKERAKDEHLYSDKEKFVTGPFKRKLEEQKKWLEEERLRELREERDDVTK 313

Query: 413 KSDISDFYFNLQKNIAYGAGNAVEPREPPQKLQSEKQAEVQKLKKHEESVNADIVNDHQS 472
           K+D+S+FY N+ KN+A+GA + +E RE  +  +  K   +++L+K E           +S
Sbjct: 314 KNDLSEFYINIGKNVAFGARD-IEAREAGRLKELRKVDRLEELRKEETRKE----KKRKS 373

Query: 473 PKYPSSPSQSAKTIEQDRHLEEHLSNSNKTTPSDVRGTSPPPLHNKTPVEKQPEHDQGEQ 532
           P+   SP             +  LS+     P D                        ++
Sbjct: 374 PEKEVSPDSG----------DFGLSSKKSVKPQDA---------------------SIKE 424

Query: 533 QPKRDHHKRSEDAVAAAKERFLARKRTK 559
           + K       EDA+A AKERFL+RK+ K
Sbjct: 434 EAKETQKATREDAIATAKERFLSRKKAK 424

[Close]

BLAST of Cp4.1LG00g01670 vs. TAIR 10
Match: AT3G11660.1 (NDR1/HIN1-like 1 )

HSP 1 Score: 226.9 bits (577), Expect = 4.5e-59
Identity = 106/196 (54.08%), Postives = 141/196 (71.94%), Query Frame = 0


Query: 1   MTDCDHHHHHDCERRRLYRRIACAIFTVLLLISLVIFLIWAILRPSKPRLILQDVTVFGL 60
           M DC++H H    RR+L RRI  +I  VL +I L I LIWAIL+PSKPR ILQD TV+  
Sbjct: 1   MKDCENHGH---SRRKLIRRIFWSIIFVLFIIFLTILLIWAILQPSKPRFILQDATVYAF 60

Query: 61  NVSSVPPAAISITMQVTISSHNPNSRIGVYYQTMDVYAAYRGQQVTLPTLLPPTYQGHND 120
           NVS  PP  ++   Q+T+SS NPN++IG+YY  +DVYA YR QQ+T PT +PPTYQGH D
Sbjct: 61  NVSGNPPNLLTSNFQITLSSRNPNNKIGIYYDRLDVYATYRSQQITFPTSIPPTYQGHKD 120

Query: 121 VTVWSPFLYGEAVPVAPEFAEALNEDNNVGAMLFNIKINGQVRWKVGSWISGRYRLNANC 180
           V +WSPF+YG +VP+AP    +L+ D + G +L  I+ +G+VRWKVG++I+G+Y L+  C
Sbjct: 121 VDIWSPFVYGTSVPIAPFNGVSLDTDKDNGVVLLIIRADGRVRWKVGTFITGKYHLHVKC 180

Query: 181 PAYIKFGDPKNGIAFG 197
           PAYI FG+  NG+  G
Sbjct: 181 PAYINFGNKANGVIVG 193

[Close]

BLAST of Cp4.1LG00g01670 vs. TAIR 10
Match: AT3G44220.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 223.0 bits (567), Expect = 6.5e-58
Identity = 108/202 (53.47%), Postives = 143/202 (70.79%), Query Frame = 0


Query: 1   MTDCDHHHHHDCERRRLYRRIACAIFTVLLLISLVIFLIWAILRPSKPRLILQDVTVFGL 60
           MT+ +  HHHD E  ++ +RI   +   L  +  V+FL+WAIL P  PR +LQD T++  
Sbjct: 1   MTEKECEHHHD-EDEKMRKRIGALVLGFLAAVLFVVFLVWAILHPHGPRFVLQDATIYAF 60

Query: 61  NVSSVPPAAISITMQVTISSHNPNSRIGVYYQTMDVYAAYRGQQVTLPTLLPPTYQGHND 120
           NVS   P  ++  +QVT+SS NPN +IG++Y  +D+YA+YR QQVTL TLLP TYQGH D
Sbjct: 61  NVSQ--PNYLTSNLQVTLSSRNPNDKIGIFYDRLDIYASYRNQQVTLATLLPATYQGHLD 120

Query: 121 VTVWSPFLYGEAVPVAPEFAEALNEDNNVGAMLFNIKINGQVRWKVGSWISGRYRLNANC 180
           VT+WSPFLYG  VPVAP F+ AL++D   G +L NIKI+G VRWKVG+W+SGRYRL+ NC
Sbjct: 121 VTIWSPFLYGTTVPVAPYFSPALSQDLTAGMVLLNIKIDGWVRWKVGTWVSGRYRLHVNC 180

Query: 181 PAYIKFGDPKNGIAFGPAMKFR 203
           PAYI      +G   GPA+K++
Sbjct: 181 PAYITLAGHFSG--DGPAVKYQ 197

[Close]

BLAST of Cp4.1LG00g01670 vs. TAIR 10
Match: AT5G22200.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 212.2 bits (539), Expect = 1.1e-54
Identity = 107/200 (53.50%), Postives = 139/200 (69.50%), Query Frame = 0


Query: 4   CDHHHHHDCER-RRLYRRIACAIFTVLLLISLVIFLIWAILRPSKPRLILQDVTVFGLNV 63
           CD H+ ++  R R + RRIA A   +++ ++ V+FL+WAIL P  PR +LQDVT+   NV
Sbjct: 6   CDQHNGYEERRMRMMMRRIAWACLGLIVAVAFVVFLVWAILHPHGPRFVLQDVTINDFNV 65

Query: 64  SSVPPAAISITMQVTISSHNPNSRIGVYYQTMDVYAAYRGQQVTLPTLLPPTYQGHNDVT 123
           S   P  +S  +QVT+SS NPN +IG++Y  +D+Y  YR Q+VTL  LLP TYQGH +VT
Sbjct: 66  SQ--PNFLSSNLQVTVSSRNPNDKIGIFYDRLDIYVTYRNQEVTLARLLPSTYQGHLEVT 125

Query: 124 VWSPFLYGEAVPVAPEFAEALNEDNNVGAMLFNIKINGQVRWKVGSWISGRYRLNANCPA 183
           VWSPFL G AVPVAP  + ALNED   G +L NIKI+G VRWKVGSW+SG YRL+ NCPA
Sbjct: 126 VWSPFLIGSAVPVAPYLSSALNEDLFAGLVLLNIKIDGWVRWKVGSWVSGSYRLHVNCPA 185

Query: 184 YIKFGDPKNGIAFGPAMKFR 203
           +I       G   GPA+K++
Sbjct: 186 FITVTGKLTGT--GPAIKYQ 201

The following BLAST results are available for this feature:

BLAST of Cp4.1LG00g01670 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SRN0	6.3e-58	54.08	NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=NHL1 PE=2 SV=1	[more]
Q9SJ54	4.0e-44	48.02	NDR1/HIN1-like protein 12 OS=Arabidopsis thaliana OX=3702 GN=NHL12 PE=2 SV=1	[more]
Q9FI03	4.4e-35	40.26	NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana OX=3702 GN=NHL26 PE=2 SV=1	[more]
Q5NCR9	2.1e-21	30.82	Nuclear speckle splicing regulatory protein 1 OS=Mus musculus OX=10090 GN=Nsrp1 ...	[more]
Q2KIC0	5.2e-20	28.17	Nuclear speckle splicing regulatory protein 1 OS=Bos taurus OX=9913 GN=NSRP1 PE=...	[more]

BLAST of Cp4.1LG00g01670 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6583699.1	0.0	87.50	NDR1/HIN1-like protein 1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023520694.1	1.37e-210	100.00	nuclear speckle splicing regulatory protein 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022927406.1	1.59e-209	99.38	nuclear speckle splicing regulatory protein 1-like [Cucurbita moschata] >XP_0229...	[more]
XP_022973152.1	3.69e-208	98.75	nuclear speckle splicing regulatory protein 1-like [Cucurbita maxima] >XP_022973...	[more]
XP_038877232.1	2.77e-174	86.02	nuclear speckle splicing regulatory protein 1-like [Benincasa hispida] >XP_03887...	[more]

BLAST of Cp4.1LG00g01670 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EHK7	7.69e-210	99.38	nuclear speckle splicing regulatory protein 1-like OS=Cucurbita moschata OX=3662...	[more]
A0A6J1I6R6	1.79e-208	98.75	nuclear speckle splicing regulatory protein 1-like OS=Cucurbita maxima OX=3661 G...	[more]
A0A0A0LJE9	1.58e-165	82.15	DUF2040 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G070270 PE=...	[more]
A0A1S3BQM2	1.53e-164	80.18	nuclear speckle splicing regulatory protein 1-like isoform X1 OS=Cucumis melo OX...	[more]
A0A1S4E1R3	8.05e-164	81.73	nuclear speckle splicing regulatory protein 1-like isoform X2 OS=Cucumis melo OX...	[more]

BLAST of Cp4.1LG00g01670 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G27285.1	3.0e-71	50.45	Coiled-coil domain-containing protein 55 (DUF2040)	[more]
AT2G27280.1	6.7e-63	46.34	Coiled-coil domain-containing protein 55 (DUF2040)	[more]
AT3G11660.1	4.5e-59	54.08	NDR1/HIN1-like 1	[more]
AT3G44220.1	6.5e-58	53.47	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT5G22200.1	1.1e-54	53.50	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 384..411
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 464..483
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 496..510
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 249..274
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 518..545
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 431..545
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 439..463
None	No IPR available	PANTHER	PTHR30060	INNER MEMBRANE PROTEIN	coord: 241..559
None	No IPR available	PANTHER	PTHR30060:SF0	COILED-COIL PROTEIN (DUF2040)-RELATED	coord: 241..559
IPR018612	Domain of unknown function DUF2040	PFAM	PF09745	DUF2040	coord: 295..411 e-value: 1.1E-37 score: 128.8
IPR004864	Late embryogenesis abundant protein, LEA_2 subgroup	PFAM	PF03168	LEA_2	coord: 77..180 e-value: 1.2E-10 score: 41.8

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG00g01670.1	Cp4.1LG00g01670.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0098542	defense response to other organism
cellular_component	GO:0046658	anchored component of plasma membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009506	plasmodesma