Cp4.1LG00g00310 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG00g00310
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	SKI/DACH domain-containing protein
Location	Cp4.1LG00: 592487 .. 594811 (+)
RNA-Seq Expression	Cp4.1LG00g00310
Synteny	Cp4.1LG00g00310

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATAAGGTATTATTATGCTACTATAGAAATAACATGATTAAGACATTGAATCGTGAATTAAGAACTTCATTGATGAATTTAGTTTGATTATCTGTAATTGGTTGTTGTGGTGTGACTATCGAACTTTGATGAATAGATTGACGTAGACTGGTGTTGTGATTTATGTCATAAAACCTCTTAATTAACTATTTTATTTATAATAATAATAATTTTGATTATTTTATTTATAATTTAATATTATTGATTATATTGGTTAACACAGAGAATGATCATGTTCAAGTAATATCTTAAACGATCTATAACATATGTATAAGGTTGAATGTCTTATTCTAATAACTAACATATGTATAAGGTTGAGTGTCTTATTCTAATAACACTGTTGATACAAAGCCATTGTATAATTGTTATAAATGATTTGATTCAAATCATTTATGTAAAGATATGTGAATGTGAGTATCTTATATAATGAGTTTGTATAAGACTGGACCACAAAACATTTAATCTCTACTTATAAATTCGTTAATTAAGAAGATCAATATTTCACATGATGAACATATACAACTCGACCTTAATACTTAATACTGAGTACATTATTAACTCGTGCCTAGAGAGAATGACTTTTGTAACTAATTTAATATACCTATATTTTGGAGACTTGACCAAATAGGGAGCTGAGAACATAATATCACGAGATGGAATTCCCTTCTTTCCATTTAGAAAAAGTAGATTAATTGTTCTCTTAGGTGCTGAATTCGGTACTTGAACAATGGGGTCCTGCCCTCTCATTGGCCCAAGAGTGATTGTGAAATGATATGACTACGATATGTTATGAAATAATATGACTATGAAATGTCGGTGATATGTTATGACATATGTTATGATGTGACGTGTTGATGATACAATATATGTTATGTTGTAACACGTTTGGCAATACAAAACATGTCGTGACGTGTTTTATGATATGATATGTCGAAGGATATGTTATGTGCATGATATGACATAAGACCATATATGTTATGAATCATACGAGATTCAACTCTAATACATGCCTTAAAGGCTATGTTGAAAAATGATATGATTTGAAGGAAAATAAAAGGGGTTGTTTTACATGATAATGAATGAAAATGTTGATCTCATACATCATTAAATATCCCCTTGTTATGATTGTACGGACGCGTATGTTACAAGACAGGAAAACGAGCATTATGTTGCAACAATCGTTATTCCTAACAAGTGTCCAACATCAATAGTTCCAGAGAATGCTCGCACAACTAAGAATGAAGACCAGGAGGTGCACAAACCGACTTGTGGGCCTATACTCGTATGTGTGGGTCGTGTATAGAACAGTATCTAAATAGTGGGGTCATTTATGAGTATTTCTTAAGATACTCAAGTCACGTGGTACTTCTCAGATGCATAAGATAGTTGTATTTATTTATTTTTAGTTTTATATAAATATAAAATTTGAGAGAGAGAGAGAGATTTTGGTGTGATATTTTAAATGTGAAAATATCCCCGGAAAGGCCACCAATATCCTTTATCTTCTACATTCTTCATCTACTGCCATTGTCTGACCCAAATATCTCTGTTTCCATCCAACTCAACTCGAACACAATGGATGGTTCCCAAGCCCTGACTCAGCCTCAAAATTTGCTTGTAATCAGAGAAGACTATTTTGTTCATTACAAATCCCCTGTTTTTCCCCCAGCCCACGCCCACTCCGATGATGAGCCATCTGATGGTGAACCATCTGATGATGAACCATCTGATGATGAGCCGTCTTCTCCGGCGACTTCGGATTTGCAATCGAGAGCAGTCGGAGAAGCGATTATGAGGGGGTGGGAGATTGTTAAAGCGAAGGTGATTTCTGGGATTGTTGGATTTGGATCCCACGCTAGGAGACTATGCTCTGCTCTGCCGGTTACTGCAATGGCGGCGGCTCTGTTCCTGCTGCTGCTACTGTTTCTGTTCAAGATCAAGATCAAGATCAAGATGCGGCTGCCATGGCGCCCACCAACTGCGGGTGTGTGTCCAGATAACCAACACCGTTTGCTTCTTCTCCTTAAACACAAGGATCAGGTTCCTTCTTCAACACCCAATCATTTTTCTTTTTCTTTTTTTCTTTTTTCATTTTTCAAATTAATTAATCAATTTTATTTTTATAAATTCAAATTATTAAAAATTATCCAAATTAATTTTATATATTTTCAAATTTTATTTAATTTTATTTTCCAGAAAATCAGTGAGCTCTTACTTCAGATCGCCCAAATGAACGAAATGCTATCAGCTCGTCGAAAGGTTCCCGTTGTGAGAGTGAAATGA

mRNA sequence

ATGAATAAGGAAAACGAGCATTATGTTGCAACAATCGTTATTCCTAACAAGTGTCCAACATCAATAGTTCCAGAGAATGCTCGCACAACTAAGAATGAAGACCAGGAGGTGCACAAACCGACTTGTGGGCCTATACTCAGAGAGAGATTTTGGTGTGATATTTTAAATGTGAAAATATCCCCGGAAAGGCCACCAATATCCTTTATCTTCTACATTCTTCATCTACTGCCATTGTCTGACCCAAATATCTCTGTTTCCATCCAACTCAACTCGAACACAATGGATGGTTCCCAAGCCCTGACTCAGCCTCAAAATTTGCTTGTAATCAGAGAAGACTATTTTGTTCATTACAAATCCCCTGTTTTTCCCCCAGCCCACGCCCACTCCGATGATGAGCCATCTGATGGTGAACCATCTGATGATGAACCATCTGATGATGAGCCGTCTTCTCCGGCGACTTCGGATTTGCAATCGAGAGCAGTCGGAGAAGCGATTATGAGGGGGTGGGAGATTGTTAAAGCGAAGGTGATTTCTGGGATTGTTGGATTTGGATCCCACGCTAGGAGACTATGCTCTGCTCTGCCGGTTACTGCAATGGCGGCGGCTCTGTTCCTGCTGCTGCTACTGTTTCTGTTCAAGATCAAGATCAAGATCAAGATGCGGCTGCCATGGCGCCCACCAACTGCGGGTGTGTGTCCAGATAACCAACACCGTTTGCTTCTTCTCCTTAAACACAAGGATCAGAAAATCAGTGAGCTCTTACTTCAGATCGCCCAAATGAACGAAATGCTATCAGCTCGTCGAAAGGTTCCCGTTGTGAGAGTGAAATGA

Coding sequence (CDS)

ATGAATAAGGAAAACGAGCATTATGTTGCAACAATCGTTATTCCTAACAAGTGTCCAACATCAATAGTTCCAGAGAATGCTCGCACAACTAAGAATGAAGACCAGGAGGTGCACAAACCGACTTGTGGGCCTATACTCAGAGAGAGATTTTGGTGTGATATTTTAAATGTGAAAATATCCCCGGAAAGGCCACCAATATCCTTTATCTTCTACATTCTTCATCTACTGCCATTGTCTGACCCAAATATCTCTGTTTCCATCCAACTCAACTCGAACACAATGGATGGTTCCCAAGCCCTGACTCAGCCTCAAAATTTGCTTGTAATCAGAGAAGACTATTTTGTTCATTACAAATCCCCTGTTTTTCCCCCAGCCCACGCCCACTCCGATGATGAGCCATCTGATGGTGAACCATCTGATGATGAACCATCTGATGATGAGCCGTCTTCTCCGGCGACTTCGGATTTGCAATCGAGAGCAGTCGGAGAAGCGATTATGAGGGGGTGGGAGATTGTTAAAGCGAAGGTGATTTCTGGGATTGTTGGATTTGGATCCCACGCTAGGAGACTATGCTCTGCTCTGCCGGTTACTGCAATGGCGGCGGCTCTGTTCCTGCTGCTGCTACTGTTTCTGTTCAAGATCAAGATCAAGATCAAGATGCGGCTGCCATGGCGCCCACCAACTGCGGGTGTGTGTCCAGATAACCAACACCGTTTGCTTCTTCTCCTTAAACACAAGGATCAGAAAATCAGTGAGCTCTTACTTCAGATCGCCCAAATGAACGAAATGCTATCAGCTCGTCGAAAGGTTCCCGTTGTGAGAGTGAAATGA

Protein sequence

MNKENEHYVATIVIPNKCPTSIVPENARTTKNEDQEVHKPTCGPILRERFWCDILNVKISPERPPISFIFYILHLLPLSDPNISVSIQLNSNTMDGSQALTQPQNLLVIREDYFVHYKSPVFPPAHAHSDDEPSDGEPSDDEPSDDEPSSPATSDLQSRAVGEAIMRGWEIVKAKVISGIVGFGSHARRLCSALPVTAMAAALFLLLLLFLFKIKIKIKMRLPWRPPTAGVCPDNQHRLLLLLKHKDQKISELLLQIAQMNEMLSARRKVPVVRVK

Homology

[Close]

BLAST of Cp4.1LG00g00310 vs. NCBI nr
Match: XP_023520476.1 (uncharacterized protein LOC111783875 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 347 bits (891), Expect = 1.08e-118
Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 0


Query: 94  MDGSQALTQPQNLLVIREDYFVHYKSPVFPPAHAHSDDEPSDGEPSDDEPSDDEPSSPAT 153
           MDGSQALTQPQNLLVIREDYFVHYKSPVFPPAHAHSDDEPSDGEPSDDEPSDDEPSSPAT
Sbjct: 1   MDGSQALTQPQNLLVIREDYFVHYKSPVFPPAHAHSDDEPSDGEPSDDEPSDDEPSSPAT 60

Query: 154 SDLQSRAVGEAIMRGWEIVKAKVISGIVGFGSHARRLCSALPVTAMAAALFLLLLLFLFK 213
           SDLQSRAVGEAIMRGWEIVKAKVISGIVGFGSHARRLCSALPVTAMAAALFLLLLLFLFK
Sbjct: 61  SDLQSRAVGEAIMRGWEIVKAKVISGIVGFGSHARRLCSALPVTAMAAALFLLLLLFLFK 120

Query: 214 IKIKIKMRLPWRPPTAGVCPDNQHRLLLLLKHKDQKISELLLQIAQMNEMLSARRKVPVV 273
           IKIKIKMRLPWRPPTAGVCPDNQHRLLLLLKHKDQKISELLLQIAQMNEMLSARRKVPVV
Sbjct: 121 IKIKIKMRLPWRPPTAGVCPDNQHRLLLLLKHKDQKISELLLQIAQMNEMLSARRKVPVV 180

Query: 274 RVK 276
           RVK
Sbjct: 181 RVK 183

[Close]

BLAST of Cp4.1LG00g00310 vs. NCBI nr
Match: XP_022946585.1 (uncharacterized protein LOC111450604 isoform X2 [Cucurbita moschata])

HSP 1 Score: 323 bits (827), Expect = 5.53e-109
Identity = 174/183 (95.08%), Postives = 176/183 (96.17%), Query Frame = 0


Query: 94  MDGSQALTQPQNLLVIREDYFVHYKSPVFPPAHAHSDDEPSDGEPSDDEPSDDEPSSPAT 153
           MDGS+A TQ QNLLVIREDYFVHYKSPVFPPAHAHSDDEPSDGEPSDDEPSDDE SSPAT
Sbjct: 1   MDGSEAPTQAQNLLVIREDYFVHYKSPVFPPAHAHSDDEPSDGEPSDDEPSDDEASSPAT 60

Query: 154 SDLQSRAVGEAIMRGWEIVKAKVISGIVGFGSHARRLCSALPVTAMAAALFLLLLLFLFK 213
           SDLQSRAVGEAIMR WEIVKAKVISGIVGFG HARRLCSALPVTAMAAALFLLLLLFLFK
Sbjct: 61  SDLQSRAVGEAIMRRWEIVKAKVISGIVGFGFHARRLCSALPVTAMAAALFLLLLLFLFK 120

Query: 214 IKIKIKMRLPWRPPTAGVCPDNQHRLLLLLKHKDQKISELLLQIAQMNEMLSARRKVPVV 273
           IK  IKMRLPWRPPTAGVCPDNQHRLLLLLKHKDQKISELL+QIAQMNEMLSARRKVPVV
Sbjct: 121 IK--IKMRLPWRPPTAGVCPDNQHRLLLLLKHKDQKISELLVQIAQMNEMLSARRKVPVV 180

Query: 274 RVK 276
           RVK
Sbjct: 181 RVK 181

[Close]

BLAST of Cp4.1LG00g00310 vs. NCBI nr
Match: KAG6599014.1 (hypothetical protein SDJN03_08792, partial [Cucurbita argyrosperma subsp. sororia] >KAG7029978.1 hypothetical protein SDJN02_08322, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 311 bits (796), Expect = 5.57e-104
Identity = 173/202 (85.64%), Postives = 177/202 (87.62%), Query Frame = 0


Query: 94  MDGSQALTQPQNLLVIREDYFVHYKSPVFPPAHAHSD-------------------DEPS 153
           MDGS+ALTQ QNLLVIREDYFVHYKSPVFPPAHAHS+                   DEPS
Sbjct: 1   MDGSEALTQAQNLLVIREDYFVHYKSPVFPPAHAHSESSHESEPSNEPSNEPSEASDEPS 60

Query: 154 DGEPSDDEPSDDEPSSPATSDLQSRAVGEAIMRGWEIVKAKVISGIVGFGSHARRLCSAL 213
           DGEPSDDEPSDDE SSPATSDLQSRAVGEAIMR W IVKAKVISGI+GFGSHARRLCSAL
Sbjct: 61  DGEPSDDEPSDDEASSPATSDLQSRAVGEAIMRRWGIVKAKVISGILGFGSHARRLCSAL 120

Query: 214 PVTAMAAALFLLLLLFLFKIKIKIKMRLPWRPPTAGVCPDNQHRLLLLLKHKDQKISELL 273
           PVTAMAAALFLLLLLFLFKIK  IKMRLPWRPPTAGVCPDNQHRLLLLLKHKDQKISELL
Sbjct: 121 PVTAMAAALFLLLLLFLFKIK--IKMRLPWRPPTAGVCPDNQHRLLLLLKHKDQKISELL 180

Query: 274 LQIAQMNEMLSARRKVPVVRVK 276
           +QIAQMNEMLSARRKVPVVRVK
Sbjct: 181 VQIAQMNEMLSARRKVPVVRVK 200

[Close]

BLAST of Cp4.1LG00g00310 vs. NCBI nr
Match: XP_022946584.1 (uncharacterized protein LOC111450604 isoform X1 [Cucurbita moschata])

HSP 1 Score: 310 bits (793), Expect = 1.59e-103
Identity = 173/202 (85.64%), Postives = 176/202 (87.13%), Query Frame = 0


Query: 94  MDGSQALTQPQNLLVIREDYFVHYKSPVFPPAHAHSD-------------------DEPS 153
           MDGS+A TQ QNLLVIREDYFVHYKSPVFPPAHAHS+                   DEPS
Sbjct: 1   MDGSEAPTQAQNLLVIREDYFVHYKSPVFPPAHAHSESSHESEPSNEPSNEPSEASDEPS 60

Query: 154 DGEPSDDEPSDDEPSSPATSDLQSRAVGEAIMRGWEIVKAKVISGIVGFGSHARRLCSAL 213
           DGEPSDDEPSDDE SSPATSDLQSRAVGEAIMR WEIVKAKVISGIVGFG HARRLCSAL
Sbjct: 61  DGEPSDDEPSDDEASSPATSDLQSRAVGEAIMRRWEIVKAKVISGIVGFGFHARRLCSAL 120

Query: 214 PVTAMAAALFLLLLLFLFKIKIKIKMRLPWRPPTAGVCPDNQHRLLLLLKHKDQKISELL 273
           PVTAMAAALFLLLLLFLFKIK  IKMRLPWRPPTAGVCPDNQHRLLLLLKHKDQKISELL
Sbjct: 121 PVTAMAAALFLLLLLFLFKIK--IKMRLPWRPPTAGVCPDNQHRLLLLLKHKDQKISELL 180

Query: 274 LQIAQMNEMLSARRKVPVVRVK 276
           +QIAQMNEMLSARRKVPVVRVK
Sbjct: 181 VQIAQMNEMLSARRKVPVVRVK 200

[Close]

BLAST of Cp4.1LG00g00310 vs. NCBI nr
Match: XP_022999313.1 (uncharacterized protein LOC111493726 isoform X2 [Cucurbita maxima])

HSP 1 Score: 293 bits (750), Expect = 4.46e-97
Identity = 165/198 (83.33%), Postives = 172/198 (86.87%), Query Frame = 0


Query: 94  MDGSQALTQPQNLLVIREDYFVHYKSPVFPPAHAHSD---------------DEPSDGEP 153
           MDG +A+TQ QN LVIREDYFVHYKSPVFPP HAHS+               DEPSD EP
Sbjct: 1   MDGFEAMTQAQNFLVIREDYFVHYKSPVFPPTHAHSEPSHESEPSNQPSEPSDEPSD-EP 60

Query: 154 SDDEPSDDEPSSPATSDLQSRAVGEAIMRGWEIVKAKVISGIVGFGSHARRLCSALPVTA 213
           SD EPSDDEPSSPA SDLQSRAVGEAIMR WEIVKAKVISGIVGFGSHARRLCSALPVTA
Sbjct: 61  SD-EPSDDEPSSPAASDLQSRAVGEAIMRRWEIVKAKVISGIVGFGSHARRLCSALPVTA 120

Query: 214 MAAALFLLLLLFLFKIKIKIKMRLPWRPPTAGVCPDNQHRLLLLLKHKDQKISELLLQIA 273
           MA ALFLLLLLFLFKIK  IKMRLPWRPPTAGVCPDN+HRLLLLLKHKDQKIS+LL+QIA
Sbjct: 121 MATALFLLLLLFLFKIK--IKMRLPWRPPTAGVCPDNEHRLLLLLKHKDQKISQLLVQIA 180

Query: 274 QMNEMLSARRKVPVVRVK 276
           QMNEMLSARRKVPVVR+K
Sbjct: 181 QMNEMLSARRKVPVVRMK 194

[Close]

BLAST of Cp4.1LG00g00310 vs. ExPASy TrEMBL
Match: A0A6J1G4A7 (uncharacterized protein LOC111450604 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111450604 PE=4 SV=1)

HSP 1 Score: 323 bits (827), Expect = 2.68e-109
Identity = 174/183 (95.08%), Postives = 176/183 (96.17%), Query Frame = 0


Query: 94  MDGSQALTQPQNLLVIREDYFVHYKSPVFPPAHAHSDDEPSDGEPSDDEPSDDEPSSPAT 153
           MDGS+A TQ QNLLVIREDYFVHYKSPVFPPAHAHSDDEPSDGEPSDDEPSDDE SSPAT
Sbjct: 1   MDGSEAPTQAQNLLVIREDYFVHYKSPVFPPAHAHSDDEPSDGEPSDDEPSDDEASSPAT 60

Query: 154 SDLQSRAVGEAIMRGWEIVKAKVISGIVGFGSHARRLCSALPVTAMAAALFLLLLLFLFK 213
           SDLQSRAVGEAIMR WEIVKAKVISGIVGFG HARRLCSALPVTAMAAALFLLLLLFLFK
Sbjct: 61  SDLQSRAVGEAIMRRWEIVKAKVISGIVGFGFHARRLCSALPVTAMAAALFLLLLLFLFK 120

Query: 214 IKIKIKMRLPWRPPTAGVCPDNQHRLLLLLKHKDQKISELLLQIAQMNEMLSARRKVPVV 273
           IK  IKMRLPWRPPTAGVCPDNQHRLLLLLKHKDQKISELL+QIAQMNEMLSARRKVPVV
Sbjct: 121 IK--IKMRLPWRPPTAGVCPDNQHRLLLLLKHKDQKISELLVQIAQMNEMLSARRKVPVV 180

Query: 274 RVK 276
           RVK
Sbjct: 181 RVK 181

[Close]

BLAST of Cp4.1LG00g00310 vs. ExPASy TrEMBL
Match: A0A6J1G485 (uncharacterized protein LOC111450604 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111450604 PE=4 SV=1)

HSP 1 Score: 310 bits (793), Expect = 7.71e-104
Identity = 173/202 (85.64%), Postives = 176/202 (87.13%), Query Frame = 0


Query: 94  MDGSQALTQPQNLLVIREDYFVHYKSPVFPPAHAHSD-------------------DEPS 153
           MDGS+A TQ QNLLVIREDYFVHYKSPVFPPAHAHS+                   DEPS
Sbjct: 1   MDGSEAPTQAQNLLVIREDYFVHYKSPVFPPAHAHSESSHESEPSNEPSNEPSEASDEPS 60

Query: 154 DGEPSDDEPSDDEPSSPATSDLQSRAVGEAIMRGWEIVKAKVISGIVGFGSHARRLCSAL 213
           DGEPSDDEPSDDE SSPATSDLQSRAVGEAIMR WEIVKAKVISGIVGFG HARRLCSAL
Sbjct: 61  DGEPSDDEPSDDEASSPATSDLQSRAVGEAIMRRWEIVKAKVISGIVGFGFHARRLCSAL 120

Query: 214 PVTAMAAALFLLLLLFLFKIKIKIKMRLPWRPPTAGVCPDNQHRLLLLLKHKDQKISELL 273
           PVTAMAAALFLLLLLFLFKIK  IKMRLPWRPPTAGVCPDNQHRLLLLLKHKDQKISELL
Sbjct: 121 PVTAMAAALFLLLLLFLFKIK--IKMRLPWRPPTAGVCPDNQHRLLLLLKHKDQKISELL 180

Query: 274 LQIAQMNEMLSARRKVPVVRVK 276
           +QIAQMNEMLSARRKVPVVRVK
Sbjct: 181 VQIAQMNEMLSARRKVPVVRVK 200

[Close]

BLAST of Cp4.1LG00g00310 vs. ExPASy TrEMBL
Match: A0A6J1KJA9 (uncharacterized protein LOC111493726 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111493726 PE=4 SV=1)

HSP 1 Score: 293 bits (750), Expect = 2.16e-97
Identity = 165/198 (83.33%), Postives = 172/198 (86.87%), Query Frame = 0


Query: 94  MDGSQALTQPQNLLVIREDYFVHYKSPVFPPAHAHSD---------------DEPSDGEP 153
           MDG +A+TQ QN LVIREDYFVHYKSPVFPP HAHS+               DEPSD EP
Sbjct: 1   MDGFEAMTQAQNFLVIREDYFVHYKSPVFPPTHAHSEPSHESEPSNQPSEPSDEPSD-EP 60

Query: 154 SDDEPSDDEPSSPATSDLQSRAVGEAIMRGWEIVKAKVISGIVGFGSHARRLCSALPVTA 213
           SD EPSDDEPSSPA SDLQSRAVGEAIMR WEIVKAKVISGIVGFGSHARRLCSALPVTA
Sbjct: 61  SD-EPSDDEPSSPAASDLQSRAVGEAIMRRWEIVKAKVISGIVGFGSHARRLCSALPVTA 120

Query: 214 MAAALFLLLLLFLFKIKIKIKMRLPWRPPTAGVCPDNQHRLLLLLKHKDQKISELLLQIA 273
           MA ALFLLLLLFLFKIK  IKMRLPWRPPTAGVCPDN+HRLLLLLKHKDQKIS+LL+QIA
Sbjct: 121 MATALFLLLLLFLFKIK--IKMRLPWRPPTAGVCPDNEHRLLLLLKHKDQKISQLLVQIA 180

Query: 274 QMNEMLSARRKVPVVRVK 276
           QMNEMLSARRKVPVVR+K
Sbjct: 181 QMNEMLSARRKVPVVRMK 194

[Close]

BLAST of Cp4.1LG00g00310 vs. ExPASy TrEMBL
Match: A0A6J1KAJ3 (uncharacterized protein LOC111493726 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111493726 PE=4 SV=1)

HSP 1 Score: 285 bits (728), Expect = 6.93e-94
Identity = 165/209 (78.95%), Postives = 172/209 (82.30%), Query Frame = 0


Query: 94  MDGSQALTQPQNLLVIREDYFVHYKSPVFPPAH-----------AHSD------------ 153
           MDG +A+TQ QN LVIREDYFVHYKSPVFPP H           AHS+            
Sbjct: 1   MDGFEAMTQAQNFLVIREDYFVHYKSPVFPPTHHQQFPLITPTHAHSEPSHESEPSNQPS 60

Query: 154 ---DEPSDGEPSDDEPSDDEPSSPATSDLQSRAVGEAIMRGWEIVKAKVISGIVGFGSHA 213
              DEPSD EPSD EPSDDEPSSPA SDLQSRAVGEAIMR WEIVKAKVISGIVGFGSHA
Sbjct: 61  EPSDEPSD-EPSD-EPSDDEPSSPAASDLQSRAVGEAIMRRWEIVKAKVISGIVGFGSHA 120

Query: 214 RRLCSALPVTAMAAALFLLLLLFLFKIKIKIKMRLPWRPPTAGVCPDNQHRLLLLLKHKD 273
           RRLCSALPVTAMA ALFLLLLLFLFKIK  IKMRLPWRPPTAGVCPDN+HRLLLLLKHKD
Sbjct: 121 RRLCSALPVTAMATALFLLLLLFLFKIK--IKMRLPWRPPTAGVCPDNEHRLLLLLKHKD 180

Query: 274 QKISELLLQIAQMNEMLSARRKVPVVRVK 276
           QKIS+LL+QIAQMNEMLSARRKVPVVR+K
Sbjct: 181 QKISQLLVQIAQMNEMLSARRKVPVVRMK 205

[Close]

BLAST of Cp4.1LG00g00310 vs. ExPASy TrEMBL
Match: A0A5A7T5Z8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1133G00150 PE=4 SV=1)

HSP 1 Score: 165 bits (417), Expect = 5.37e-47
Identity = 108/201 (53.73%), Postives = 132/201 (65.67%), Query Frame = 0


Query: 94  MDGSQALTQP-----QNLLVIREDYFVHYKSPVFPPA------------HAHSDDEPSDG 153
           MDGS+    P     +N LVIR+DYFVH++SPVFPP             H  S DE    
Sbjct: 1   MDGSEGEEAPNPNPDENFLVIRDDYFVHHESPVFPPILHEDLPVLTVENHIPSSDESESS 60

Query: 154 EPSDDEPSDDEPSSPATSDLQSRAVG-EAIMRGWEIVKAKVISGIVGFGSHARRLCSALP 213
           E SD   S    S+P +SD++ RAV  EAIMRG E+VKAKV+SGIVGFG +  RL S   
Sbjct: 61  ESSDSSDS----STPESSDMRLRAVVVEAIMRGCEVVKAKVVSGIVGFGCYGVRLRSIFG 120

Query: 214 VTAMAAALFLLLLLFLFKIKIKIKMRLPWRPPTAGVCPDNQHRLLLLLKHKDQKISELLL 273
            TAMA     LL++ LF +K+K+K+ LPWRP    V  D +  L+LLLKHKD+KI++LLL
Sbjct: 121 ATAMAG----LLIVLLFLLKMKMKVWLPWRPRGLAVRRDKEEPLVLLLKHKDEKINQLLL 180

Query: 274 QIAQMNEMLSARRKVPVVRVK 276
           QIAQMNE LSARRKVPVVR+K
Sbjct: 181 QIAQMNETLSARRKVPVVRIK 193

The following BLAST results are available for this feature:

BLAST of Cp4.1LG00g00310 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG00g00310 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023520476.1	1.08e-118	100.00	uncharacterized protein LOC111783875 [Cucurbita pepo subsp. pepo]	[more]
XP_022946585.1	5.53e-109	95.08	uncharacterized protein LOC111450604 isoform X2 [Cucurbita moschata]	[more]
KAG6599014.1	5.57e-104	85.64	hypothetical protein SDJN03_08792, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022946584.1	1.59e-103	85.64	uncharacterized protein LOC111450604 isoform X1 [Cucurbita moschata]	[more]
XP_022999313.1	4.46e-97	83.33	uncharacterized protein LOC111493726 isoform X2 [Cucurbita maxima]	[more]

BLAST of Cp4.1LG00g00310 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G4A7	2.68e-109	95.08	uncharacterized protein LOC111450604 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1G485	7.71e-104	85.64	uncharacterized protein LOC111450604 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1KJA9	2.16e-97	83.33	uncharacterized protein LOC111493726 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1KAJ3	6.93e-94	78.95	uncharacterized protein LOC111493726 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A5A7T5Z8	5.37e-47	53.73	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of Cp4.1LG00g00310 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 134..148
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 124..157
None	No IPR available	PANTHER	PTHR37206	TRANSMEMBRANE PROTEIN	coord: 98..275

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG00g00310.1	Cp4.1LG00g00310.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane