CmoCh20G011810 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh20G011810
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionPentatricopeptide repeat-containing protein
LocationCmo_Chr20: 11653968 .. 11655944 (-)
RNA-Seq ExpressionCmoCh20G011810
SyntenyCmoCh20G011810
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTTTTTCCCGCCTCAACCGCTCTGTATTTCGTTTCCACTCATTTCCTGCGATTCCTGCTTCAAAGAGTGGTGATTTCAAGTCCCCTGTTCATCAATCCCTTCACCTTTCATTAGAAAGATGCTCCTCCATGAGACAGCTCAAGGTCCTCCATGCCCAAATCATCCTCCAAGGTTTGGTTTCTGAAACTCTCACTCTTGGAAAATTGGTCTCTTTCTGTGCTGTTTCTCAAGCTGGGGATCTTCACTACGCCCAGCTTGTTTTTGATCACCATCTCCAACCCAACAAGTTTATGTTCAACTGCTTGATAAGGGGATACTCCACTTCCCAACACCCAATCAAAGCTATTGTTCTCTACTTTAAAATGATGCGTTCTGGGTTTCTGCCCAATCAATTTACTCTCCCATTTGTGCTCAAAGCTTGTGCTTCTCAGCTTGCGTATTGGGAAGTTCTTCTTGTCCATTGCCATACCATTCGACTCGGGATTTTGTCTCATGTTTGCGTACAGAATGCTCTTATCAATGCTTATGCCGTTTGTGGTTTTGTCCAATGCGCACGCCAACTGTTCGATGAAATGTCACATAGAACTCTGGTGTCCTGGAATTCGATCATTGGTGGGTACTCTAGGAATGGGTTCTGTAAGGAAGCCTTTTTGCTGTTTCGAGATATGAGAGTGTGGGGATTTCAGCCGGATCTGTTCACGTTGGTTCATCTATTTTCCATTTGTACAAGAAGTTATAACTTAGATATGGGTAAATGTGTGCATCTCTATGTAGAGATTACTGGGATTGAGTTCGATCAAATTTTAAGAAATGCTCTGCTGGATATGTATGCGAAATGTGGGGATTTGCTTTCTGCTCGGACAATCTTCGATAGAATGATCGACAAAAATGTTGTTTCGCATACTTCCATGATTAGTGCATATTCAAAACATGGCCTTTTTCGCTATGCTCGTGAGGTATTTGATCAAATTCCTGAGAAGAATGTGATCTCTTGGAATTCAATGATCTCATGTTATGTCCAAGAAGGTCGATGCAAGGAAGCATTGCTTCTTTTTCAACAGATGTGTGAGACAACCATCATGCCTGATGAGGCTACTCTAGTGAGTGTTCTTTCAGCCTGTAGTCAAATTGGTGATTTAGCCATGGGAAAGAAAGCACATTGTTACATTTGCAGCAACAATATCATGATCACTGCCACTCTTTCGAATTCCCTCATCGACATGTATGCAAAATGTGGTGCCCTCGAAACTGCCATGGATTTTTTCTTTGAGTCTAAAGATAAGAATTTAGTGTCCTGGAATGTCATTATCCAGGCGCTTGCATTACATGGCTATGGCCTGCATGCACTCAAACTATTCAATATGATGCATACTTCGGGGATTTGGCCCGACGAAATCACATTCACTGGACTGCTATCTGCTTGTAGCCATAGCGGACTTGTCGACATGGGACGCTATTTATTCGAGAGAATGAGTTCCGTTTACGGGATTCTTCCTGAAATCGAGCATTACGCTTGCATGGTGGACTTGCTAGGAAGAGGAGGGCTGTTGCAGGAAGCAGTAAAACTCATTGGAGGAATGCCAATGAAGCCAGATGTGGTTGTGTGGGGCGCTATGCTTGGTGGTTGTAGGACTTACGGGAATGTGGACATCGGGAATCAAATCTTGAAACAGGTTCTGGAGTTGGAGACATACAGTTCTGGGCTCTACGTTCTTCTGTCAAACATATATTTTGAAGCAAAGAGATGGAAAGAAGTGAGAAATATAAGAAAACTGATGAATGAGCATGGGATCATCAAGTGTAAAGCTGTTAGCTTCATTGAGATTGATGAATGCATTACAGAGTTTATGGTTGATGACAAGAGACATGAAACAAGCGGTATATATCCCTTGCTGGATCAGTTAACCGATCATTTGAGGTCGGTTGGGCACTTGTCGAATAACTCGATTCTCATTTCAGATTCCGAAGGCTAA

mRNA sequence

ATGTTTTTTTCCCGCCTCAACCGCTCTGTATTTCGTTTCCACTCATTTCCTGCGATTCCTGCTTCAAAGAGTGGTGATTTCAAGTCCCCTGTTCATCAATCCCTTCACCTTTCATTAGAAAGATGCTCCTCCATGAGACAGCTCAAGGTCCTCCATGCCCAAATCATCCTCCAAGGTTTGGTTTCTGAAACTCTCACTCTTGGAAAATTGGTCTCTTTCTGTGCTGTTTCTCAAGCTGGGGATCTTCACTACGCCCAGCTTGTTTTTGATCACCATCTCCAACCCAACAAGTTTATGTTCAACTGCTTGATAAGGGGATACTCCACTTCCCAACACCCAATCAAAGCTATTGTTCTCTACTTTAAAATGATGCGTTCTGGGTTTCTGCCCAATCAATTTACTCTCCCATTTGTGCTCAAAGCTTGTGCTTCTCAGCTTGCGTATTGGGAAGTTCTTCTTGTCCATTGCCATACCATTCGACTCGGGATTTTGTCTCATGTTTGCGTACAGAATGCTCTTATCAATGCTTATGCCGTTTGTGGTTTTGTCCAATGCGCACGCCAACTGTTCGATGAAATGTCACATAGAACTCTGGTGTCCTGGAATTCGATCATTGGTGGGTACTCTAGGAATGGGTTCTGTAAGGAAGCCTTTTTGCTGTTTCGAGATATGAGAGTGTGGGGATTTCAGCCGGATCTGTTCACGTTGGTTCATCTATTTTCCATTTGTACAAGAAGTTATAACTTAGATATGGGTAAATGTGTGCATCTCTATGTAGAGATTACTGGGATTGAGTTCGATCAAATTTTAAGAAATGCTCTGCTGGATATGTATGCGAAATGTGGGGATTTGCTTTCTGCTCGGACAATCTTCGATAGAATGATCGACAAAAATGTTGTTTCGCATACTTCCATGATTAGTGCATATTCAAAACATGGCCTTTTTCGCTATGCTCGTGAGGTATTTGATCAAATTCCTGAGAAGAATGTGATCTCTTGGAATTCAATGATCTCATGTTATGTCCAAGAAGGTCGATGCAAGGAAGCATTGCTTCTTTTTCAACAGATGTGTGAGACAACCATCATGCCTGATGAGGCTACTCTAGTGAGTGTTCTTTCAGCCTGTAGTCAAATTGGTGATTTAGCCATGGGAAAGAAAGCACATTGTTACATTTGCAGCAACAATATCATGATCACTGCCACTCTTTCGAATTCCCTCATCGACATGTATGCAAAATGTGGTGCCCTCGAAACTGCCATGGATTTTTTCTTTGAGTCTAAAGATAAGAATTTAGTGTCCTGGAATGTCATTATCCAGGCGCTTGCATTACATGGCTATGGCCTGCATGCACTCAAACTATTCAATATGATGCATACTTCGGGGATTTGGCCCGACGAAATCACATTCACTGGACTGCTATCTGCTTGTAGCCATAGCGGACTTGTCGACATGGGACGCTATTTATTCGAGAGAATGAGTTCCGTTTACGGGATTCTTCCTGAAATCGAGCATTACGCTTGCATGGTGGACTTGCTAGGAAGAGGAGGGCTGTTGCAGGAAGCAGTAAAACTCATTGGAGGAATGCCAATGAAGCCAGATGTGGTTGTGTGGGGCGCTATGCTTGGTGGTTGTAGGACTTACGGGAATGTGGACATCGGGAATCAAATCTTGAAACAGGTTCTGGAGTTGGAGACATACAGTTCTGGGCTCTACGTTCTTCTGTCAAACATATATTTTGAAGCAAAGAGATGGAAAGAAGTGAGAAATATAAGAAAACTGATGAATGAGCATGGGATCATCAAGTGTAAAGCTGTTAGCTTCATTGAGATTGATGAATGCATTACAGAGTTTATGGTTGATGACAAGAGACATGAAACAAGCGGTATATATCCCTTGCTGGATCAGTTAACCGATCATTTGAGGTCGGTTGGGCACTTGTCGAATAACTCGATTCTCATTTCAGATTCCGAAGGCTAA

Coding sequence (CDS)

ATGTTTTTTTCCCGCCTCAACCGCTCTGTATTTCGTTTCCACTCATTTCCTGCGATTCCTGCTTCAAAGAGTGGTGATTTCAAGTCCCCTGTTCATCAATCCCTTCACCTTTCATTAGAAAGATGCTCCTCCATGAGACAGCTCAAGGTCCTCCATGCCCAAATCATCCTCCAAGGTTTGGTTTCTGAAACTCTCACTCTTGGAAAATTGGTCTCTTTCTGTGCTGTTTCTCAAGCTGGGGATCTTCACTACGCCCAGCTTGTTTTTGATCACCATCTCCAACCCAACAAGTTTATGTTCAACTGCTTGATAAGGGGATACTCCACTTCCCAACACCCAATCAAAGCTATTGTTCTCTACTTTAAAATGATGCGTTCTGGGTTTCTGCCCAATCAATTTACTCTCCCATTTGTGCTCAAAGCTTGTGCTTCTCAGCTTGCGTATTGGGAAGTTCTTCTTGTCCATTGCCATACCATTCGACTCGGGATTTTGTCTCATGTTTGCGTACAGAATGCTCTTATCAATGCTTATGCCGTTTGTGGTTTTGTCCAATGCGCACGCCAACTGTTCGATGAAATGTCACATAGAACTCTGGTGTCCTGGAATTCGATCATTGGTGGGTACTCTAGGAATGGGTTCTGTAAGGAAGCCTTTTTGCTGTTTCGAGATATGAGAGTGTGGGGATTTCAGCCGGATCTGTTCACGTTGGTTCATCTATTTTCCATTTGTACAAGAAGTTATAACTTAGATATGGGTAAATGTGTGCATCTCTATGTAGAGATTACTGGGATTGAGTTCGATCAAATTTTAAGAAATGCTCTGCTGGATATGTATGCGAAATGTGGGGATTTGCTTTCTGCTCGGACAATCTTCGATAGAATGATCGACAAAAATGTTGTTTCGCATACTTCCATGATTAGTGCATATTCAAAACATGGCCTTTTTCGCTATGCTCGTGAGGTATTTGATCAAATTCCTGAGAAGAATGTGATCTCTTGGAATTCAATGATCTCATGTTATGTCCAAGAAGGTCGATGCAAGGAAGCATTGCTTCTTTTTCAACAGATGTGTGAGACAACCATCATGCCTGATGAGGCTACTCTAGTGAGTGTTCTTTCAGCCTGTAGTCAAATTGGTGATTTAGCCATGGGAAAGAAAGCACATTGTTACATTTGCAGCAACAATATCATGATCACTGCCACTCTTTCGAATTCCCTCATCGACATGTATGCAAAATGTGGTGCCCTCGAAACTGCCATGGATTTTTTCTTTGAGTCTAAAGATAAGAATTTAGTGTCCTGGAATGTCATTATCCAGGCGCTTGCATTACATGGCTATGGCCTGCATGCACTCAAACTATTCAATATGATGCATACTTCGGGGATTTGGCCCGACGAAATCACATTCACTGGACTGCTATCTGCTTGTAGCCATAGCGGACTTGTCGACATGGGACGCTATTTATTCGAGAGAATGAGTTCCGTTTACGGGATTCTTCCTGAAATCGAGCATTACGCTTGCATGGTGGACTTGCTAGGAAGAGGAGGGCTGTTGCAGGAAGCAGTAAAACTCATTGGAGGAATGCCAATGAAGCCAGATGTGGTTGTGTGGGGCGCTATGCTTGGTGGTTGTAGGACTTACGGGAATGTGGACATCGGGAATCAAATCTTGAAACAGGTTCTGGAGTTGGAGACATACAGTTCTGGGCTCTACGTTCTTCTGTCAAACATATATTTTGAAGCAAAGAGATGGAAAGAAGTGAGAAATATAAGAAAACTGATGAATGAGCATGGGATCATCAAGTGTAAAGCTGTTAGCTTCATTGAGATTGATGAATGCATTACAGAGTTTATGGTTGATGACAAGAGACATGAAACAAGCGGTATATATCCCTTGCTGGATCAGTTAACCGATCATTTGAGGTCGGTTGGGCACTTGTCGAATAACTCGATTCTCATTTCAGATTCCGAAGGCTAA

Protein sequence

MFFSRLNRSVFRFHSFPAIPASKSGDFKSPVHQSLHLSLERCSSMRQLKVLHAQIILQGLVSETLTLGKLVSFCAVSQAGDLHYAQLVFDHHLQPNKFMFNCLIRGYSTSQHPIKAIVLYFKMMRSGFLPNQFTLPFVLKACASQLAYWEVLLVHCHTIRLGILSHVCVQNALINAYAVCGFVQCARQLFDEMSHRTLVSWNSIIGGYSRNGFCKEAFLLFRDMRVWGFQPDLFTLVHLFSICTRSYNLDMGKCVHLYVEITGIEFDQILRNALLDMYAKCGDLLSARTIFDRMIDKNVVSHTSMISAYSKHGLFRYAREVFDQIPEKNVISWNSMISCYVQEGRCKEALLLFQQMCETTIMPDEATLVSVLSACSQIGDLAMGKKAHCYICSNNIMITATLSNSLIDMYAKCGALETAMDFFFESKDKNLVSWNVIIQALALHGYGLHALKLFNMMHTSGIWPDEITFTGLLSACSHSGLVDMGRYLFERMSSVYGILPEIEHYACMVDLLGRGGLLQEAVKLIGGMPMKPDVVVWGAMLGGCRTYGNVDIGNQILKQVLELETYSSGLYVLLSNIYFEAKRWKEVRNIRKLMNEHGIIKCKAVSFIEIDECITEFMVDDKRHETSGIYPLLDQLTDHLRSVGHLSNNSILISDSEG
Homology
BLAST of CmoCh20G011810 vs. ExPASy Swiss-Prot
Match: Q9SJZ3 (Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E28 PE=2 SV=1)

HSP 1 Score: 486.9 bits (1252), Expect = 3.7e-136
Identity = 271/669 (40.51%), Postives = 407/669 (60.84%), Query Frame = 0

Query: 5   RLNRSVF-----RFHSFP---AIPASKSGDFKSPVHQSLHLSLERCSSMRQLKVLHAQII 64
           +LNRS++     R  S P     P + +      +H  L   LE+C  +  LK + AQ+I
Sbjct: 18  KLNRSLYSHSQRRTRSLPHHRDKPINWNSTHSFVLHNPLLSLLEKCKLLLHLKQIQAQMI 77

Query: 65  LQGLVSETLTLGKLVSFCAVSQAGDLHYAQLVFDHHLQPNKFMFNCLIRGYSTSQHPIKA 124
           + GL+ +     +L++FCA+S++  L Y+  +      PN F +N  IRG+S S++P ++
Sbjct: 78  INGLILDPFASSRLIAFCALSESRYLDYSVKILKGIENPNIFSWNVTIRGFSESENPKES 137

Query: 125 IVLYFKMMRSGFL---PNQFTLPFVLKACA----SQLAYWEVLLVHCHTIRLGILSHVCV 184
            +LY +M+R G     P+ FT P + K CA    S L +  ++L H   +RL ++SH  V
Sbjct: 138 FLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGH--MILGHVLKLRLELVSH--V 197

Query: 185 QNALINAYAVCGFVQCARQLFDEMSHRTLVSWNSIIGGYSRNGFCKEAFLLFRDMRVWGF 244
            NA I+ +A CG ++ AR++FDE   R LVSWN +I GY + G  ++A  +++ M   G 
Sbjct: 198 HNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGV 257

Query: 245 QPDLFTLVHLFSICTRSYNLDMGKCVHLYVEITGIEFDQILRNALLDMYAKCGDLLSART 304
           +PD  T++ L S C+   +L+ GK  + YV+  G+     L NAL+DM++KCGD+  AR 
Sbjct: 258 KPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARR 317

Query: 305 IFDRMIDKNVVSHTSMISAYSKHGLFRYAREVFDQIPEKNVISWNSMISCYVQEGRCKEA 364
           IFD +  + +VS T+MIS Y++ GL   +R++FD + EK+V+ WN+MI   VQ  R ++A
Sbjct: 318 IFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDA 377

Query: 365 LLLFQQMCETTIMPDEATLVSVLSACSQIGDLAMGKKAHCYICSNNIMITATLSNSLIDM 424
           L LFQ+M  +   PDE T++  LSACSQ+G L +G   H YI   ++ +   L  SL+DM
Sbjct: 378 LALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDM 437

Query: 425 YAKCGALETAMDFFFESKDKNLVSWNVIIQALALHGYGLHALKLFNMMHTSGIWPDEITF 484
           YAKCG +  A+  F   + +N +++  II  LALHG    A+  FN M  +GI PDEITF
Sbjct: 438 YAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITF 497

Query: 485 TGLLSACSHSGLVDMGRYLFERMSSVYGILPEIEHYACMVDLLGRGGLLQEAVKLIGGMP 544
            GLLSAC H G++  GR  F +M S + + P+++HY+ MVDLLGR GLL+EA +L+  MP
Sbjct: 498 IGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMP 557

Query: 545 MKPDVVVWGAMLGGCRTYGNVDIGNQILKQVLELETYSSGLYVLLSNIYFEAKRWKEVRN 604
           M+ D  VWGA+L GCR +GNV++G +  K++LEL+   SG+YVLL  +Y EA  W++ + 
Sbjct: 558 MEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKR 617

Query: 605 IRKLMNEHGIIKCKAVSFIEIDECITEFMVDDK-RHETSGIYPLLDQLTDHLRSVGHLSN 658
            R++MNE G+ K    S IE++  + EF+V DK R E+  IY  L  L  H+R     S+
Sbjct: 618 ARRMMNERGVEKIPGCSSIEVNGIVCEFIVRDKSRPESEKIYDRLHCLGRHMR-----SS 677

BLAST of CmoCh20G011810 vs. ExPASy Swiss-Prot
Match: Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 450.7 bits (1158), Expect = 2.9e-125
Identity = 253/680 (37.21%), Postives = 385/680 (56.62%), Query Frame = 0

Query: 14  HSFPAIPASKSGDFKS-PVHQSLHLSLERCSSMRQLKVLHAQIILQGLVSETLTLGKLVS 73
           + F  +P+S    + S   H SL L L  C +++ L+++HAQ+I  GL +    L KL+ 
Sbjct: 15  YPFHFLPSSSDPPYDSIRNHPSLSL-LHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIE 74

Query: 74  FCAVSQAGD-LHYAQLVFDHHLQPNKFMFNCLIRGYSTSQHPIKAIVLYFKMMRSGFLPN 133
           FC +S   + L YA  VF    +PN  ++N + RG++ S  P+ A+ LY  M+  G LPN
Sbjct: 75  FCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPN 134

Query: 134 QFTLPFVLKACASQLAYWEVLLVHCHTIRLGI---------LSHVCVQN----------- 193
            +T PFVLK+CA   A+ E   +H H ++LG          L  + VQN           
Sbjct: 135 SYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFD 194

Query: 194 -----------ALINAYAVCGFVQCARQLFDEMSHRTLVSWNSIIGGYSRNGFCKEAFLL 253
                      ALI  YA  G+++ A++LFDE+  + +VSWN++I GY+  G  KEA  L
Sbjct: 195 KSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALEL 254

Query: 254 FRDMRVWGFQPDLFTLVHLFSICTRSYNLDMGKCVHLYVEITGIEFDQILRNALLDMYAK 313
           F+DM     +PD  T+V + S C +S ++++G+ VHL+++  G   +  + NAL+D+Y+K
Sbjct: 255 FKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSK 314

Query: 314 CGDLLSARTIFDRMIDKNVVSHTSMISAYSKHGLFRYAREVFDQIPEKNVISWNSMISCY 373
           CG+L +A  +F+R                               +P K+VISWN++I  Y
Sbjct: 315 CGELETACGLFER-------------------------------LPYKDVISWNTLIGGY 374

Query: 374 VQEGRCKEALLLFQQMCETTIMPDEATLVSVLSACSQIGDLAMGKKAHCYICS--NNIMI 433
                 KEALLLFQ+M  +   P++ T++S+L AC+ +G + +G+  H YI      +  
Sbjct: 375 THMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTN 434

Query: 434 TATLSNSLIDMYAKCGALETAMDFFFESKDKNLVSWNVIIQALALHGYGLHALKLFNMMH 493
            ++L  SLIDMYAKCG +E A   F     K+L SWN +I   A+HG    +  LF+ M 
Sbjct: 435 ASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMR 494

Query: 494 TSGIWPDEITFTGLLSACSHSGLVDMGRYLFERMSSVYGILPEIEHYACMVDLLGRGGLL 553
             GI PD+ITF GLLSACSHSG++D+GR++F  M+  Y + P++EHY CM+DLLG  GL 
Sbjct: 495 KIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLF 554

Query: 554 QEAVKLIGGMPMKPDVVVWGAMLGGCRTYGNVDIGNQILKQVLELETYSSGLYVLLSNIY 613
           +EA ++I  M M+PD V+W ++L  C+ +GNV++G    + ++++E  + G YVLLSNIY
Sbjct: 555 KEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIY 614

Query: 614 FEAKRWKEVRNIRKLMNEHGIIKCKAVSFIEIDECITEFMVDDKRH-ETSGIYPLLDQLT 658
             A RW EV   R L+N+ G+ K    S IEID  + EF++ DK H     IY +L+++ 
Sbjct: 615 ASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEME 662

BLAST of CmoCh20G011810 vs. ExPASy Swiss-Prot
Match: O82380 (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H33 PE=2 SV=1)

HSP 1 Score: 442.2 bits (1136), Expect = 1.0e-122
Identity = 234/617 (37.93%), Postives = 369/617 (59.81%), Query Frame = 0

Query: 33  QSLHLSL-ERCSSMRQLKVLHAQIILQGLVSETLTLGKLVSFCAVSQAGDLHYAQLVFDH 92
           +S H+SL ERC S+RQLK  H  +I  G  S+  +  KL +  A+S    L YA+ VFD 
Sbjct: 30  RSRHISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDE 89

Query: 93  HLQPNKFMFNCLIRGYSTSQHPIKAIVLYFKMM-RSGFLPNQFTLPFVLKACASQLAYWE 152
             +PN F +N LIR Y++   P+ +I  +  M+  S   PN++T PF++KA A   +   
Sbjct: 90  IPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSL 149

Query: 153 VLLVHCHTIRLGILSHVCVQNALINAYAVCGFVQCARQLFDEMSHRTLVSWNSIIGGYSR 212
              +H   ++  + S V V N+LI+ Y  CG +  A ++F  +  + +VSWNS+I G+ +
Sbjct: 150 GQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQ 209

Query: 213 NGFCKEAFLLFRDMRVWGFQPDLFTLVHLFSICTRSYNLDMGKCVHLYVEITGIEFDQIL 272
            G   +A  LF+ M     +    T+V + S C +  NL+ G+ V  Y+E   +  +  L
Sbjct: 210 KGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTL 269

Query: 273 RNALLDMYAKCGDLLSARTIFDRMIDKNVVSHTSMISAYSKHGLFRYAREVFDQIPEKNV 332
            NA+LDMY KCG +  A+ +FD M +K+ V+ T+M+  Y+    +  AREV + +P+K++
Sbjct: 270 ANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDI 329

Query: 333 ISWNSMISCYVQEGRCKEALLLFQQM-CETTIMPDEATLVSVLSACSQIGDLAMGKKAHC 392
           ++WN++IS Y Q G+  EAL++F ++  +  +  ++ TLVS LSAC+Q+G L +G+  H 
Sbjct: 330 VAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHS 389

Query: 393 YICSNNIMITATLSNSLIDMYAKCGALETAMDFFFESKDKNLVSWNVIIQALALHGYGLH 452
           YI  + I +   ++++LI MY+KCG LE + + F   + +++  W+ +I  LA+HG G  
Sbjct: 390 YIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNE 449

Query: 453 ALKLFNMMHTSGIWPDEITFTGLLSACSHSGLVDMGRYLFERMSSVYGILPEIEHYACMV 512
           A+ +F  M  + + P+ +TFT +  ACSH+GLVD    LF +M S YGI+PE +HYAC+V
Sbjct: 450 AVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIV 509

Query: 513 DLLGRGGLLQEAVKLIGGMPMKPDVVVWGAMLGGCRTYGNVDIGNQILKQVLELETYSSG 572
           D+LGR G L++AVK I  MP+ P   VWGA+LG C+ + N+++      ++LELE  + G
Sbjct: 510 DVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDG 569

Query: 573 LYVLLSNIYFEAKRWKEVRNIRKLMNEHGIIKCKAVSFIEIDECITEFMVDDKRHETS-G 632
            +VLLSNIY +  +W+ V  +RK M   G+ K    S IEID  I EF+  D  H  S  
Sbjct: 570 AHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEK 629

Query: 633 IYPLLDQLTDHLRSVGH 646
           +Y  L ++ + L+S G+
Sbjct: 630 VYGKLHEVMEKLKSNGY 646

BLAST of CmoCh20G011810 vs. ExPASy Swiss-Prot
Match: O23337 (Pentatricopeptide repeat-containing protein At4g14820 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H3 PE=2 SV=1)

HSP 1 Score: 426.4 bits (1095), Expect = 5.9e-118
Identity = 231/621 (37.20%), Postives = 361/621 (58.13%), Query Frame = 0

Query: 39  LERCSSMRQLKVLHAQIILQGLVSETLTLGKLVSFCAVSQAGDLHYAQLVFDH-HLQPNK 98
           L  C S+  +K LHA  IL+ +++  L    L +    S + +L YA  VF      P  
Sbjct: 19  LSFCKSLNHIKQLHAH-ILRTVINHKLN-SFLFNLSVSSSSINLSYALNVFSSIPSPPES 78

Query: 99  FMFNCLIRGYSTSQHPIKAIVLYFKMMRSGFLPNQFTLPFVLKACASQLAYWEVLLVHCH 158
            +FN  +R  S S  P   I+ Y ++   G   +QF+   +LKA +   A +E + +H  
Sbjct: 79  IVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGV 138

Query: 159 TIRLGILSHVCVQNALINAYAVCGFVQCARQLFDEMSHRTLVSWNSIIGGYSRNGFCKEA 218
             ++  L    V+   ++ YA CG +  AR +FDEMSHR +V+WN++I  Y R G   EA
Sbjct: 139 AFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEA 198

Query: 219 FLLFRDMRVWGFQPDLFTLVHLFSICTRSYNLDMGKCVHLYVEITGIEFDQILRNALLDM 278
           F LF +M+     PD   L ++ S C R+ N+   + ++ ++    +  D  L  AL+ M
Sbjct: 199 FKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTM 258

Query: 279 YAKCGDLLSARTIFDRMIDKNVVSHTSMISAYSKHGLFRYAREVFDQIPEKNVISWNSMI 338
           YA  G +  AR  F +M  +N+   T+M+S YSK G    A+ +FDQ  +K+++ W +MI
Sbjct: 259 YAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMI 318

Query: 339 SCYVQEGRCKEALLLFQQMCETTIMPDEATLVSVLSACSQIGDLAMGKKAHCYICSNNIM 398
           S YV+    +EAL +F++MC + I PD  ++ SV+SAC+ +G L   K  H  I  N + 
Sbjct: 319 SAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLE 378

Query: 399 ITATLSNSLIDMYAKCGALETAMDFFFESKDKNLVSWNVIIQALALHGYGLHALKLFNMM 458
              +++N+LI+MYAKCG L+   D F +   +N+VSW+ +I AL++HG    AL LF  M
Sbjct: 379 SELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARM 438

Query: 459 HTSGIWPDEITFTGLLSACSHSGLVDMGRYLFERMSSVYGILPEIEHYACMVDLLGRGGL 518
               + P+E+TF G+L  CSHSGLV+ G+ +F  M+  Y I P++EHY CMVDL GR  L
Sbjct: 439 KQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANL 498

Query: 519 LQEAVKLIGGMPMKPDVVVWGAMLGGCRTYGNVDIGNQILKQVLELETYSSGLYVLLSNI 578
           L+EA+++I  MP+  +VV+WG+++  CR +G +++G    K++LELE    G  VL+SNI
Sbjct: 499 LREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNI 558

Query: 579 YFEAKRWKEVRNIRKLMNEHGIIKCKAVSFIEIDECITEFMVDDKRHETSG-IYPLLDQL 638
           Y   +RW++VRNIR++M E  + K K +S I+ +    EF++ DKRH+ S  IY  LD++
Sbjct: 559 YAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEV 618

Query: 639 TDHLRSVGHLSNNSILISDSE 658
              L+  G++ +   ++ D E
Sbjct: 619 VSKLKLAGYVPDCGSVLVDVE 637

BLAST of CmoCh20G011810 vs. ExPASy Swiss-Prot
Match: Q9LS72 (Pentatricopeptide repeat-containing protein At3g29230 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E27 PE=2 SV=1)

HSP 1 Score: 418.3 bits (1074), Expect = 1.6e-115
Identity = 229/605 (37.85%), Postives = 355/605 (58.68%), Query Frame = 0

Query: 39  LERCSSMRQLKVLHAQIILQGLVSETLTLGKLVSFCAVSQAGDLHYAQLVFDHHLQPNKF 98
           L +C+++ Q+K LHAQII + L  +     KL+S  A+S     + A  VF+   +PN  
Sbjct: 26  LPKCANLNQVKQLHAQIIRRNLHEDLHIAPKLIS--ALSLCRQTNLAVRVFNQVQEPNVH 85

Query: 99  MFNCLIRGYSTSQHPIKAIVLYFKMMRSGFLPNQFTLPFVLKACASQLAYWEVLLVHCHT 158
           + N LIR ++ +  P +A  ++ +M R G   + FT PF+LKAC+ Q     V ++H H 
Sbjct: 86  LCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHI 145

Query: 159 IRLGILSHVCVQNALINAYAVCG--FVQCARQLFDEMSHRTLVSWNSIIGGYSRNGFCKE 218
            +LG+ S + V NALI+ Y+ CG   V+ A +LF++MS R  VSWNS++GG  + G  ++
Sbjct: 146 EKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRD 205

Query: 219 AFLLFRDMRVWGFQPDLFTLVHLFSICTRSYNLDMGKCVHLYVEITGIEFDQILRNALLD 278
           A  LF +M                                        + D I  N +LD
Sbjct: 206 ARRLFDEMP---------------------------------------QRDLISWNTMLD 265

Query: 279 MYAKCGDLLSARTIFDRMIDKNVVSHTSMISAYSKHGLFRYAREVFDQ--IPEKNVISWN 338
            YA+C ++  A  +F++M ++N VS ++M+  YSK G    AR +FD+  +P KNV++W 
Sbjct: 266 GYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWT 325

Query: 339 SMISCYVQEGRCKEALLLFQQMCETTIMPDEATLVSVLSACSQIGDLAMGKKAHCYICSN 398
            +I+ Y ++G  KEA  L  QM  + +  D A ++S+L+AC++ G L++G + H  +  +
Sbjct: 326 IIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRS 385

Query: 399 NIMITATLSNSLIDMYAKCGALETAMDFFFESKDKNLVSWNVIIQALALHGYGLHALKLF 458
           N+   A + N+L+DMYAKCG L+ A D F +   K+LVSWN ++  L +HG+G  A++LF
Sbjct: 386 NLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELF 445

Query: 459 NMMHTSGIWPDEITFTGLLSACSHSGLVDMGRYLFERMSSVYGILPEIEHYACMVDLLGR 518
           + M   GI PD++TF  +L +C+H+GL+D G   F  M  VY ++P++EHY C+VDLLGR
Sbjct: 446 SRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGR 505

Query: 519 GGLLQEAVKLIGGMPMKPDVVVWGAMLGGCRTYGNVDIGNQILKQVLELETYSSGLYVLL 578
            G L+EA+K++  MPM+P+VV+WGA+LG CR +  VDI  ++L  +++L+    G Y LL
Sbjct: 506 VGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLL 565

Query: 579 SNIYFEAKRWKEVRNIRKLMNEHGIIKCKAVSFIEIDECITEFMVDDKRHETSG-IYPLL 638
           SNIY  A+ W+ V +IR  M   G+ K    S +E+++ I EF V DK H  S  IY +L
Sbjct: 566 SNIYAAAEDWEGVADIRSKMKSMGVEKPSGASSVELEDGIHEFTVFDKSHPKSDQIYQML 589

BLAST of CmoCh20G011810 vs. ExPASy TrEMBL
Match: A0A6J1EJQ7 (pentatricopeptide repeat-containing protein At2g22410, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111434951 PE=4 SV=1)

HSP 1 Score: 1339.3 bits (3465), Expect = 0.0e+00
Identity = 658/658 (100.00%), Postives = 658/658 (100.00%), Query Frame = 0

Query: 1   MFFSRLNRSVFRFHSFPAIPASKSGDFKSPVHQSLHLSLERCSSMRQLKVLHAQIILQGL 60
           MFFSRLNRSVFRFHSFPAIPASKSGDFKSPVHQSLHLSLERCSSMRQLKVLHAQIILQGL
Sbjct: 9   MFFSRLNRSVFRFHSFPAIPASKSGDFKSPVHQSLHLSLERCSSMRQLKVLHAQIILQGL 68

Query: 61  VSETLTLGKLVSFCAVSQAGDLHYAQLVFDHHLQPNKFMFNCLIRGYSTSQHPIKAIVLY 120
           VSETLTLGKLVSFCAVSQAGDLHYAQLVFDHHLQPNKFMFNCLIRGYSTSQHPIKAIVLY
Sbjct: 69  VSETLTLGKLVSFCAVSQAGDLHYAQLVFDHHLQPNKFMFNCLIRGYSTSQHPIKAIVLY 128

Query: 121 FKMMRSGFLPNQFTLPFVLKACASQLAYWEVLLVHCHTIRLGILSHVCVQNALINAYAVC 180
           FKMMRSGFLPNQFTLPFVLKACASQLAYWEVLLVHCHTIRLGILSHVCVQNALINAYAVC
Sbjct: 129 FKMMRSGFLPNQFTLPFVLKACASQLAYWEVLLVHCHTIRLGILSHVCVQNALINAYAVC 188

Query: 181 GFVQCARQLFDEMSHRTLVSWNSIIGGYSRNGFCKEAFLLFRDMRVWGFQPDLFTLVHLF 240
           GFVQCARQLFDEMSHRTLVSWNSIIGGYSRNGFCKEAFLLFRDMRVWGFQPDLFTLVHLF
Sbjct: 189 GFVQCARQLFDEMSHRTLVSWNSIIGGYSRNGFCKEAFLLFRDMRVWGFQPDLFTLVHLF 248

Query: 241 SICTRSYNLDMGKCVHLYVEITGIEFDQILRNALLDMYAKCGDLLSARTIFDRMIDKNVV 300
           SICTRSYNLDMGKCVHLYVEITGIEFDQILRNALLDMYAKCGDLLSARTIFDRMIDKNVV
Sbjct: 249 SICTRSYNLDMGKCVHLYVEITGIEFDQILRNALLDMYAKCGDLLSARTIFDRMIDKNVV 308

Query: 301 SHTSMISAYSKHGLFRYAREVFDQIPEKNVISWNSMISCYVQEGRCKEALLLFQQMCETT 360
           SHTSMISAYSKHGLFRYAREVFDQIPEKNVISWNSMISCYVQEGRCKEALLLFQQMCETT
Sbjct: 309 SHTSMISAYSKHGLFRYAREVFDQIPEKNVISWNSMISCYVQEGRCKEALLLFQQMCETT 368

Query: 361 IMPDEATLVSVLSACSQIGDLAMGKKAHCYICSNNIMITATLSNSLIDMYAKCGALETAM 420
           IMPDEATLVSVLSACSQIGDLAMGKKAHCYICSNNIMITATLSNSLIDMYAKCGALETAM
Sbjct: 369 IMPDEATLVSVLSACSQIGDLAMGKKAHCYICSNNIMITATLSNSLIDMYAKCGALETAM 428

Query: 421 DFFFESKDKNLVSWNVIIQALALHGYGLHALKLFNMMHTSGIWPDEITFTGLLSACSHSG 480
           DFFFESKDKNLVSWNVIIQALALHGYGLHALKLFNMMHTSGIWPDEITFTGLLSACSHSG
Sbjct: 429 DFFFESKDKNLVSWNVIIQALALHGYGLHALKLFNMMHTSGIWPDEITFTGLLSACSHSG 488

Query: 481 LVDMGRYLFERMSSVYGILPEIEHYACMVDLLGRGGLLQEAVKLIGGMPMKPDVVVWGAM 540
           LVDMGRYLFERMSSVYGILPEIEHYACMVDLLGRGGLLQEAVKLIGGMPMKPDVVVWGAM
Sbjct: 489 LVDMGRYLFERMSSVYGILPEIEHYACMVDLLGRGGLLQEAVKLIGGMPMKPDVVVWGAM 548

Query: 541 LGGCRTYGNVDIGNQILKQVLELETYSSGLYVLLSNIYFEAKRWKEVRNIRKLMNEHGII 600
           LGGCRTYGNVDIGNQILKQVLELETYSSGLYVLLSNIYFEAKRWKEVRNIRKLMNEHGII
Sbjct: 549 LGGCRTYGNVDIGNQILKQVLELETYSSGLYVLLSNIYFEAKRWKEVRNIRKLMNEHGII 608

Query: 601 KCKAVSFIEIDECITEFMVDDKRHETSGIYPLLDQLTDHLRSVGHLSNNSILISDSEG 659
           KCKAVSFIEIDECITEFMVDDKRHETSGIYPLLDQLTDHLRSVGHLSNNSILISDSEG
Sbjct: 609 KCKAVSFIEIDECITEFMVDDKRHETSGIYPLLDQLTDHLRSVGHLSNNSILISDSEG 666

BLAST of CmoCh20G011810 vs. ExPASy TrEMBL
Match: A0A6J1I2L8 (pentatricopeptide repeat-containing protein At2g22410, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111470348 PE=4 SV=1)

HSP 1 Score: 1305.4 bits (3377), Expect = 0.0e+00
Identity = 640/658 (97.26%), Postives = 645/658 (98.02%), Query Frame = 0

Query: 1   MFFSRLNRSVFRFHSFPAIPASKSGDFKSPVHQSLHLSLERCSSMRQLKVLHAQIILQGL 60
           MFFSRLNRSVFRFHS PAIPASKS DFKSPVHQSLHLSLERCSSMRQLKVLHAQIILQGL
Sbjct: 9   MFFSRLNRSVFRFHSLPAIPASKSRDFKSPVHQSLHLSLERCSSMRQLKVLHAQIILQGL 68

Query: 61  VSETLTLGKLVSFCAVSQAGDLHYAQLVFDHHLQPNKFMFNCLIRGYSTSQHPIKAIVLY 120
           VSETLTLGKLVSFCAVSQAGDL YAQLVFDHHLQPNKFMFNCLIRGYSTSQHPI AI LY
Sbjct: 69  VSETLTLGKLVSFCAVSQAGDLPYAQLVFDHHLQPNKFMFNCLIRGYSTSQHPINAIFLY 128

Query: 121 FKMMRSGFLPNQFTLPFVLKACASQLAYWEVLLVHCHTIRLGILSHVCVQNALINAYAVC 180
           FKMMRSGFLPNQFTLPFVLKACASQLAYWEVLLVHCH IRLGILSHVCVQNALIN YAVC
Sbjct: 129 FKMMRSGFLPNQFTLPFVLKACASQLAYWEVLLVHCHAIRLGILSHVCVQNALINVYAVC 188

Query: 181 GFVQCARQLFDEMSHRTLVSWNSIIGGYSRNGFCKEAFLLFRDMRVWGFQPDLFTLVHLF 240
           GFVQCARQLFDEMSH+TLVSWNSIIGGYSRNGFCKEAFLLFRDMRVWGFQPDLFTLVHLF
Sbjct: 189 GFVQCARQLFDEMSHKTLVSWNSIIGGYSRNGFCKEAFLLFRDMRVWGFQPDLFTLVHLF 248

Query: 241 SICTRSYNLDMGKCVHLYVEITGIEFDQILRNALLDMYAKCGDLLSARTIFDRMIDKNVV 300
           SICTRSYNLDMGKCVHLYVEITG EFDQILRNA+LDMYAKCGDLLSARTIFDRMIDKNVV
Sbjct: 249 SICTRSYNLDMGKCVHLYVEITGTEFDQILRNAMLDMYAKCGDLLSARTIFDRMIDKNVV 308

Query: 301 SHTSMISAYSKHGLFRYAREVFDQIPEKNVISWNSMISCYVQEGRCKEALLLFQQMCETT 360
           SHTSMISAYSKHGLFRYAREVFDQIPEKNVISWNSMISCYVQEGRCKEALLLFQQMCETT
Sbjct: 309 SHTSMISAYSKHGLFRYAREVFDQIPEKNVISWNSMISCYVQEGRCKEALLLFQQMCETT 368

Query: 361 IMPDEATLVSVLSACSQIGDLAMGKKAHCYICSNNIMITATLSNSLIDMYAKCGALETAM 420
           IMPDEATLVSVLSACSQIGDLAMGKKAHCYICSNNIMITATLSNSLIDMYAKCGALET M
Sbjct: 369 IMPDEATLVSVLSACSQIGDLAMGKKAHCYICSNNIMITATLSNSLIDMYAKCGALETTM 428

Query: 421 DFFFESKDKNLVSWNVIIQALALHGYGLHALKLFNMMHTSGIWPDEITFTGLLSACSHSG 480
           DFFFESKDKNLVSWNVIIQALALHGYGLHALKLFNMMHTSGIWPDEITFTGLLSACSHSG
Sbjct: 429 DFFFESKDKNLVSWNVIIQALALHGYGLHALKLFNMMHTSGIWPDEITFTGLLSACSHSG 488

Query: 481 LVDMGRYLFERMSSVYGILPEIEHYACMVDLLGRGGLLQEAVKLIGGMPMKPDVVVWGAM 540
           LVDMGRYLFERMSSVYGILPEIEHYACMVDLLGRGGLLQEAVKLIGGMPMKPDVVVWGAM
Sbjct: 489 LVDMGRYLFERMSSVYGILPEIEHYACMVDLLGRGGLLQEAVKLIGGMPMKPDVVVWGAM 548

Query: 541 LGGCRTYGNVDIGNQILKQVLELETYSSGLYVLLSNIYFEAKRWKEVRNIRKLMNEHGII 600
           LG CRTYGNVDIGNQILKQVLELETYSSGLYVLLSNIYFEA RWKEV+NIRKLMN+HGII
Sbjct: 549 LGACRTYGNVDIGNQILKQVLELETYSSGLYVLLSNIYFEANRWKEVKNIRKLMNDHGII 608

Query: 601 KCKAVSFIEIDECITEFMVDDKRHETSGIYPLLDQLTDHLRSVGHLSNNSILISDSEG 659
           KCKAVSFIEIDECITEFMVDDKRHETSGIYPLLDQLTDHLRSVGHLSNNSI +SD EG
Sbjct: 609 KCKAVSFIEIDECITEFMVDDKRHETSGIYPLLDQLTDHLRSVGHLSNNSIPVSDFEG 666

BLAST of CmoCh20G011810 vs. ExPASy TrEMBL
Match: A0A5A7TQY7 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G00460 PE=4 SV=1)

HSP 1 Score: 1091.3 bits (2821), Expect = 0.0e+00
Identity = 528/651 (81.11%), Postives = 586/651 (90.02%), Query Frame = 0

Query: 4   SRLNRSVFRFHSFPAIPASKSG----DFKSPVHQSLHLSLERCSSMRQLKVLHAQIILQG 63
           SRLNRS+ RFHS P  P++++      F S VHQSLH SLE+C+SMR+LKVLHAQIILQG
Sbjct: 21  SRLNRSLSRFHSLPTHPSAENSTSPLHFNSSVHQSLHFSLEKCASMRELKVLHAQIILQG 80

Query: 64  LVSETLTLGKLVSFCAVSQAGDLHYAQLVFDHHLQPNKFMFNCLIRGYSTSQHPIKAIVL 123
           LVS+ +TLGKL+SFC+VSQAGDL YAQLVFDH LQPNKFMFNCLIRGYSTS HPI AI+L
Sbjct: 81  LVSQNITLGKLISFCSVSQAGDLQYAQLVFDHLLQPNKFMFNCLIRGYSTSPHPINAILL 140

Query: 124 YFKMMRSGFLPNQFTLPFVLKACASQLAYWEVLLVHCHTIRLGILSHVCVQNALINAYAV 183
           Y KMMRSGFLPN+FTLPFVLKACASQLAYWE  +VHCH IRLG+LSHV V NALINAYAV
Sbjct: 141 YIKMMRSGFLPNRFTLPFVLKACASQLAYWEAFVVHCHAIRLGMLSHVYVHNALINAYAV 200

Query: 184 CGFVQCARQLFDEMSHRTLVSWNSIIGGYSRNGFCKEAFLLFRDMRVWGFQPDLFTLVHL 243
            GFVQCA Q+FDEMS+RTLVSWNS+IGGY RNG CKEAFLLFR+MR  GFQPD FTLVHL
Sbjct: 201 FGFVQCAYQVFDEMSNRTLVSWNSMIGGYFRNGLCKEAFLLFREMRESGFQPDQFTLVHL 260

Query: 244 FSICTRSYNLDMGKCVHLYVEITGIEFDQILRNALLDMYAKCGDLLSARTIFDRMIDKNV 303
            S+C++S  LD+GKCVH YVEITGIE DQILRNALLDMYAKCGDLL A+TIF RMI K V
Sbjct: 261 LSMCSKSCRLDIGKCVHHYVEITGIEVDQILRNALLDMYAKCGDLLFAQTIFHRMIHKTV 320

Query: 304 VSHTSMISAYSKHGLFRYAREVFDQIPEKNVISWNSMISCYVQEGRCKEALLLFQQMCET 363
           VS TSMISAYS HGL  +ARE+FDQIPEKNVISWNSM+SCYVQ+G+CKEALLLFQQMCET
Sbjct: 321 VSFTSMISAYSNHGLIHHAREIFDQIPEKNVISWNSMMSCYVQDGQCKEALLLFQQMCET 380

Query: 364 TIMPDEATLVSVLSACSQIGDLAMGKKAHCYICSNNIMITATLSNSLIDMYAKCGALETA 423
           T +PDE TLVSVLSACSQIGDLAMG+K HCYIC +NI+IT TL N+L+DMYAKCGALETA
Sbjct: 381 TTIPDETTLVSVLSACSQIGDLAMGEKTHCYICRHNIVITVTLLNALVDMYAKCGALETA 440

Query: 424 MDFFFESKDKNLVSWNVIIQALALHGYGLHALKLFNMMHTSGIWPDEITFTGLLSACSHS 483
           +DFFFE KDKNLVSWNV+IQALALHG+GL ALKLFNMMHT+GIWPD+ TF GLLSAC+HS
Sbjct: 441 LDFFFEFKDKNLVSWNVVIQALALHGHGLDALKLFNMMHTTGIWPDKFTFMGLLSACNHS 500

Query: 484 GLVDMGRYLFERMSSVYGILPEIEHYACMVDLLGRGGLLQEAVKLIGGMPMKPDVVVWGA 543
           GLV+MG+YLFERMSS+YGILPEIEHYACMVDLLGRGG+LQEA+KLIGGMPMKPDVV+WGA
Sbjct: 501 GLVNMGQYLFERMSSIYGILPEIEHYACMVDLLGRGGMLQEAIKLIGGMPMKPDVVMWGA 560

Query: 544 MLGGCRTYGNVDIGNQILKQVLELETYSSGLYVLLSNIYFEAKRWKEVRNIRKLMNEHGI 603
           +LG CRTYG+VDI N ILKQ+LELET SSGLYVLLSNIYFEA RWKE +N+RKLM+ HGI
Sbjct: 561 LLGACRTYGDVDIANIILKQILELETDSSGLYVLLSNIYFEAMRWKEAKNVRKLMSGHGI 620

Query: 604 IKCKAVSFIEIDECITEFMVDDKRHETSGIYPLLDQLTDHLRSVGHLSNNS 651
           IKCKAVSF+EIDECI EFMVDDKRHET+GIYPLLDQLTDHL+SVG   +NS
Sbjct: 621 IKCKAVSFVEIDECIIEFMVDDKRHETNGIYPLLDQLTDHLKSVGGEKSNS 671

BLAST of CmoCh20G011810 vs. ExPASy TrEMBL
Match: A0A6J1D6T6 (pentatricopeptide repeat-containing protein At2g22410, mitochondrial-like OS=Momordica charantia OX=3673 GN=LOC111017876 PE=4 SV=1)

HSP 1 Score: 1077.8 bits (2786), Expect = 0.0e+00
Identity = 533/659 (80.88%), Postives = 579/659 (87.86%), Query Frame = 0

Query: 5   RLNRSVFRFHSFPAIPA------SKSGDFKSPVHQSLHLSLERCSSMRQLKVLHAQIILQ 64
           RL  S+F FH  P++        S + +FKSPV QSLH SL+RCSSM  LK+LHAQIIL 
Sbjct: 14  RLKNSLFGFHLLPSVSVVDAKTISFAPEFKSPVLQSLHHSLQRCSSMTHLKLLHAQIILH 73

Query: 65  GLVSETLTLGKLVSFCAVSQAGDLHYAQLVFDHHLQPNKFMFNCLIRGYSTSQHPIKAIV 124
           GL+S   TLGKL+SFCA+S+AGDL YAQLVFDH LQPNKFMFNCLIRGYS SQHPIKAI 
Sbjct: 74  GLLSHDFTLGKLISFCALSEAGDLRYAQLVFDHILQPNKFMFNCLIRGYSNSQHPIKAIF 133

Query: 125 LYFKMMRSGFLPNQFTLPFVLKACASQLAYWEVLLVHCHTIRLGILSHVCVQNALINAYA 184
           LYF+M+RSGFLPN+FTLPFV KACAS+LAYWE L+VHCH  RLGILSHVCVQNALIN Y 
Sbjct: 134 LYFQMVRSGFLPNEFTLPFVFKACASELAYWEALVVHCHAFRLGILSHVCVQNALINVYT 193

Query: 185 VCGFVQCARQLFDEMSHRTLVSWNSIIGGYSRNGFCKEAFLLFRDMRVWGFQPDLFTLVH 244
           VCG VQ AR++FDEMS R LVSWNS+IGGYSR GFCKEAFL FR+MR  GF PD FTLV+
Sbjct: 194 VCGLVQRARRVFDEMSLRNLVSWNSMIGGYSRTGFCKEAFLTFREMRELGFHPDHFTLVN 253

Query: 245 LFSICTRSYNLDMGKCVHLYVEITGIEFDQILRNALLDMYAKCGDLLSARTIFDRMIDKN 304
           L SIC+RSYNLD+GKCVHLY+EITGIE DQILRNALLDMYAKCG+LLSA  IFDRM++KN
Sbjct: 254 LLSICSRSYNLDLGKCVHLYIEITGIEVDQILRNALLDMYAKCGNLLSAWRIFDRMLEKN 313

Query: 305 VVSHTSMISAYSKHGLFRYAREVFDQIPEKNVISWNSMISCYVQEGRCKEALLLFQQMCE 364
           VVS TSMISAYSKHGL R AR+VF+QIP+KNV+SWNSMISCYVQEG+ KEALLLFQQMCE
Sbjct: 314 VVSSTSMISAYSKHGLIRNARDVFEQIPKKNVVSWNSMISCYVQEGKSKEALLLFQQMCE 373

Query: 365 TTIMPDEATLVSVLSACSQIGDLAMGKKAHCYICSNNIMITATLSNSLIDMYAKCGALET 424
           T IMP+EATLVSVLSACSQIGDLAMG+KAHCY+ SNNI IT TLSN+LIDMYAKCGALET
Sbjct: 374 TPIMPNEATLVSVLSACSQIGDLAMGQKAHCYVYSNNIKITPTLSNALIDMYAKCGALET 433

Query: 425 AMDFFFESKDKNLVSWNVIIQALALHGYGLHALKLFNMMHTSGIWPDEITFTGLLSACSH 484
           AMD FFE   KNLVSWNVIIQALALHGYG  ALKLFNMM+T GIWPDEITF GLLSACSH
Sbjct: 434 AMDIFFEFTSKNLVSWNVIIQALALHGYGHEALKLFNMMNTLGIWPDEITFIGLLSACSH 493

Query: 485 SGLVDMGRYLFERMSSVYGILPEIEHYACMVDLLGRGGLLQEAVKLIGGMPMKPDVVVWG 544
           SGLV+ GRYLFERMSS+YGI PEIEHYACMVDLLGRGGLL+EA++LIGGMPMKPDVVVWG
Sbjct: 494 SGLVNAGRYLFERMSSIYGIFPEIEHYACMVDLLGRGGLLEEAMRLIGGMPMKPDVVVWG 553

Query: 545 AMLGGCRTYGNVDIGNQILKQVLELETYSSGLYVLLSNIYFEAKRWKEVRNIRKLMNEHG 604
           AMLG CRTYGNVDIGNQILKQVLELE YSSGLYVLLSNIYFEAKR +EV+NIRKLMNEHG
Sbjct: 554 AMLGACRTYGNVDIGNQILKQVLELEPYSSGLYVLLSNIYFEAKRLREVKNIRKLMNEHG 613

Query: 605 IIKCKAVSFIEIDECITEFMVDDKRHETSGIYPLLDQLTDHLRSVGHLSNNSILISDSE 658
           IIKCKAVS IEID CI EFMVDDKR ETSGIY LLDQLTDHL+SVGH SN +    D E
Sbjct: 614 IIKCKAVSLIEIDGCIIEFMVDDKRPETSGIYTLLDQLTDHLKSVGHFSNLTAAFWDVE 672

BLAST of CmoCh20G011810 vs. ExPASy TrEMBL
Match: A0A1S3C6H9 (pentatricopeptide repeat-containing protein At2g22410, mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC103497406 PE=4 SV=1)

HSP 1 Score: 1058.1 bits (2735), Expect = 1.5e-305
Identity = 511/629 (81.24%), Postives = 567/629 (90.14%), Query Frame = 0

Query: 4   SRLNRSVFRFHSFPAIPASKSG----DFKSPVHQSLHLSLERCSSMRQLKVLHAQIILQG 63
           SRLNRS+ RFHS P  P++++      F S VHQSLH SLE+C+SMR+LKVLHAQIILQG
Sbjct: 21  SRLNRSLSRFHSLPTHPSAENSTSPLHFNSSVHQSLHFSLEKCASMRELKVLHAQIILQG 80

Query: 64  LVSETLTLGKLVSFCAVSQAGDLHYAQLVFDHHLQPNKFMFNCLIRGYSTSQHPIKAIVL 123
           LVS+ +TLGKL+SFC+VSQAGDL YAQLVFDH LQPNKFMFNCLIRGYSTS HPI AI+L
Sbjct: 81  LVSQNITLGKLISFCSVSQAGDLQYAQLVFDHLLQPNKFMFNCLIRGYSTSPHPINAILL 140

Query: 124 YFKMMRSGFLPNQFTLPFVLKACASQLAYWEVLLVHCHTIRLGILSHVCVQNALINAYAV 183
           Y KMMRSGFLPN+FTLPFVLKACASQLAYWE  +VHCH IRLG+LSHV V NALINAYAV
Sbjct: 141 YIKMMRSGFLPNRFTLPFVLKACASQLAYWEAFVVHCHAIRLGMLSHVYVHNALINAYAV 200

Query: 184 CGFVQCARQLFDEMSHRTLVSWNSIIGGYSRNGFCKEAFLLFRDMRVWGFQPDLFTLVHL 243
            GFVQCA Q+FDEMS+RTLVSWNS+IGGY RNG CKEAFLLFR+MR  GFQPD FTLVHL
Sbjct: 201 FGFVQCAYQVFDEMSNRTLVSWNSMIGGYFRNGLCKEAFLLFREMRESGFQPDQFTLVHL 260

Query: 244 FSICTRSYNLDMGKCVHLYVEITGIEFDQILRNALLDMYAKCGDLLSARTIFDRMIDKNV 303
            S+C++S  LD+GKCVH YVEITGIE DQILRNALLDMYAKCGDLL A+TIF RMI K V
Sbjct: 261 LSMCSKSCRLDIGKCVHHYVEITGIEVDQILRNALLDMYAKCGDLLFAQTIFHRMIHKTV 320

Query: 304 VSHTSMISAYSKHGLFRYAREVFDQIPEKNVISWNSMISCYVQEGRCKEALLLFQQMCET 363
           VS TSMISAYS HGL  +ARE+FDQIPEKNVISWNSM+SCYVQ+G+CKEALLLFQQMCET
Sbjct: 321 VSFTSMISAYSNHGLIHHAREIFDQIPEKNVISWNSMMSCYVQDGQCKEALLLFQQMCET 380

Query: 364 TIMPDEATLVSVLSACSQIGDLAMGKKAHCYICSNNIMITATLSNSLIDMYAKCGALETA 423
           T +PDE TLVSVLSACSQIGDLAMG+K HCYIC +NI+IT TL N+L+DMYAKCGALETA
Sbjct: 381 TTIPDETTLVSVLSACSQIGDLAMGEKTHCYICRHNIVITVTLLNALVDMYAKCGALETA 440

Query: 424 MDFFFESKDKNLVSWNVIIQALALHGYGLHALKLFNMMHTSGIWPDEITFTGLLSACSHS 483
           +DFFFE KDKNLVSWNV+IQALALHG+GL ALKLFNMMHT+GIWPD+ TF GLLSAC+HS
Sbjct: 441 LDFFFEFKDKNLVSWNVVIQALALHGHGLDALKLFNMMHTTGIWPDKFTFMGLLSACNHS 500

Query: 484 GLVDMGRYLFERMSSVYGILPEIEHYACMVDLLGRGGLLQEAVKLIGGMPMKPDVVVWGA 543
           GLV+MG+YLFERMSS+YGILPEIEHYACMVDLLGRGG+LQEA+KLIGGMPMKPDVV+WGA
Sbjct: 501 GLVNMGQYLFERMSSIYGILPEIEHYACMVDLLGRGGMLQEAIKLIGGMPMKPDVVMWGA 560

Query: 544 MLGGCRTYGNVDIGNQILKQVLELETYSSGLYVLLSNIYFEAKRWKEVRNIRKLMNEHGI 603
           +LG CRTYG+VDI N ILKQ+LELET SSGLYVLLSNIYFEA RWKE +N+RKLM+ HGI
Sbjct: 561 LLGACRTYGDVDIANIILKQILELETDSSGLYVLLSNIYFEAMRWKEAKNVRKLMSGHGI 620

Query: 604 IKCKAVSFIEIDECITEFMVDDKRHETSG 629
           IKCKAVSF+EIDECI EFMVDDKRHET+G
Sbjct: 621 IKCKAVSFVEIDECIIEFMVDDKRHETNG 649

BLAST of CmoCh20G011810 vs. NCBI nr
Match: XP_022928049.1 (pentatricopeptide repeat-containing protein At2g22410, mitochondrial-like [Cucurbita moschata])

HSP 1 Score: 1339.3 bits (3465), Expect = 0.0e+00
Identity = 658/658 (100.00%), Postives = 658/658 (100.00%), Query Frame = 0

Query: 1   MFFSRLNRSVFRFHSFPAIPASKSGDFKSPVHQSLHLSLERCSSMRQLKVLHAQIILQGL 60
           MFFSRLNRSVFRFHSFPAIPASKSGDFKSPVHQSLHLSLERCSSMRQLKVLHAQIILQGL
Sbjct: 9   MFFSRLNRSVFRFHSFPAIPASKSGDFKSPVHQSLHLSLERCSSMRQLKVLHAQIILQGL 68

Query: 61  VSETLTLGKLVSFCAVSQAGDLHYAQLVFDHHLQPNKFMFNCLIRGYSTSQHPIKAIVLY 120
           VSETLTLGKLVSFCAVSQAGDLHYAQLVFDHHLQPNKFMFNCLIRGYSTSQHPIKAIVLY
Sbjct: 69  VSETLTLGKLVSFCAVSQAGDLHYAQLVFDHHLQPNKFMFNCLIRGYSTSQHPIKAIVLY 128

Query: 121 FKMMRSGFLPNQFTLPFVLKACASQLAYWEVLLVHCHTIRLGILSHVCVQNALINAYAVC 180
           FKMMRSGFLPNQFTLPFVLKACASQLAYWEVLLVHCHTIRLGILSHVCVQNALINAYAVC
Sbjct: 129 FKMMRSGFLPNQFTLPFVLKACASQLAYWEVLLVHCHTIRLGILSHVCVQNALINAYAVC 188

Query: 181 GFVQCARQLFDEMSHRTLVSWNSIIGGYSRNGFCKEAFLLFRDMRVWGFQPDLFTLVHLF 240
           GFVQCARQLFDEMSHRTLVSWNSIIGGYSRNGFCKEAFLLFRDMRVWGFQPDLFTLVHLF
Sbjct: 189 GFVQCARQLFDEMSHRTLVSWNSIIGGYSRNGFCKEAFLLFRDMRVWGFQPDLFTLVHLF 248

Query: 241 SICTRSYNLDMGKCVHLYVEITGIEFDQILRNALLDMYAKCGDLLSARTIFDRMIDKNVV 300
           SICTRSYNLDMGKCVHLYVEITGIEFDQILRNALLDMYAKCGDLLSARTIFDRMIDKNVV
Sbjct: 249 SICTRSYNLDMGKCVHLYVEITGIEFDQILRNALLDMYAKCGDLLSARTIFDRMIDKNVV 308

Query: 301 SHTSMISAYSKHGLFRYAREVFDQIPEKNVISWNSMISCYVQEGRCKEALLLFQQMCETT 360
           SHTSMISAYSKHGLFRYAREVFDQIPEKNVISWNSMISCYVQEGRCKEALLLFQQMCETT
Sbjct: 309 SHTSMISAYSKHGLFRYAREVFDQIPEKNVISWNSMISCYVQEGRCKEALLLFQQMCETT 368

Query: 361 IMPDEATLVSVLSACSQIGDLAMGKKAHCYICSNNIMITATLSNSLIDMYAKCGALETAM 420
           IMPDEATLVSVLSACSQIGDLAMGKKAHCYICSNNIMITATLSNSLIDMYAKCGALETAM
Sbjct: 369 IMPDEATLVSVLSACSQIGDLAMGKKAHCYICSNNIMITATLSNSLIDMYAKCGALETAM 428

Query: 421 DFFFESKDKNLVSWNVIIQALALHGYGLHALKLFNMMHTSGIWPDEITFTGLLSACSHSG 480
           DFFFESKDKNLVSWNVIIQALALHGYGLHALKLFNMMHTSGIWPDEITFTGLLSACSHSG
Sbjct: 429 DFFFESKDKNLVSWNVIIQALALHGYGLHALKLFNMMHTSGIWPDEITFTGLLSACSHSG 488

Query: 481 LVDMGRYLFERMSSVYGILPEIEHYACMVDLLGRGGLLQEAVKLIGGMPMKPDVVVWGAM 540
           LVDMGRYLFERMSSVYGILPEIEHYACMVDLLGRGGLLQEAVKLIGGMPMKPDVVVWGAM
Sbjct: 489 LVDMGRYLFERMSSVYGILPEIEHYACMVDLLGRGGLLQEAVKLIGGMPMKPDVVVWGAM 548

Query: 541 LGGCRTYGNVDIGNQILKQVLELETYSSGLYVLLSNIYFEAKRWKEVRNIRKLMNEHGII 600
           LGGCRTYGNVDIGNQILKQVLELETYSSGLYVLLSNIYFEAKRWKEVRNIRKLMNEHGII
Sbjct: 549 LGGCRTYGNVDIGNQILKQVLELETYSSGLYVLLSNIYFEAKRWKEVRNIRKLMNEHGII 608

Query: 601 KCKAVSFIEIDECITEFMVDDKRHETSGIYPLLDQLTDHLRSVGHLSNNSILISDSEG 659
           KCKAVSFIEIDECITEFMVDDKRHETSGIYPLLDQLTDHLRSVGHLSNNSILISDSEG
Sbjct: 609 KCKAVSFIEIDECITEFMVDDKRHETSGIYPLLDQLTDHLRSVGHLSNNSILISDSEG 666

BLAST of CmoCh20G011810 vs. NCBI nr
Match: KAG6571425.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1337.0 bits (3459), Expect = 0.0e+00
Identity = 657/658 (99.85%), Postives = 657/658 (99.85%), Query Frame = 0

Query: 1   MFFSRLNRSVFRFHSFPAIPASKSGDFKSPVHQSLHLSLERCSSMRQLKVLHAQIILQGL 60
           MFFSRLNRSVFRFHS PAIPASKSGDFKSPVHQSLHLSLERCSSMRQLKVLHAQIILQGL
Sbjct: 1   MFFSRLNRSVFRFHSLPAIPASKSGDFKSPVHQSLHLSLERCSSMRQLKVLHAQIILQGL 60

Query: 61  VSETLTLGKLVSFCAVSQAGDLHYAQLVFDHHLQPNKFMFNCLIRGYSTSQHPIKAIVLY 120
           VSETLTLGKLVSFCAVSQAGDLHYAQLVFDHHLQPNKFMFNCLIRGYSTSQHPIKAIVLY
Sbjct: 61  VSETLTLGKLVSFCAVSQAGDLHYAQLVFDHHLQPNKFMFNCLIRGYSTSQHPIKAIVLY 120

Query: 121 FKMMRSGFLPNQFTLPFVLKACASQLAYWEVLLVHCHTIRLGILSHVCVQNALINAYAVC 180
           FKMMRSGFLPNQFTLPFVLKACASQLAYWEVLLVHCHTIRLGILSHVCVQNALINAYAVC
Sbjct: 121 FKMMRSGFLPNQFTLPFVLKACASQLAYWEVLLVHCHTIRLGILSHVCVQNALINAYAVC 180

Query: 181 GFVQCARQLFDEMSHRTLVSWNSIIGGYSRNGFCKEAFLLFRDMRVWGFQPDLFTLVHLF 240
           GFVQCARQLFDEMSHRTLVSWNSIIGGYSRNGFCKEAFLLFRDMRVWGFQPDLFTLVHLF
Sbjct: 181 GFVQCARQLFDEMSHRTLVSWNSIIGGYSRNGFCKEAFLLFRDMRVWGFQPDLFTLVHLF 240

Query: 241 SICTRSYNLDMGKCVHLYVEITGIEFDQILRNALLDMYAKCGDLLSARTIFDRMIDKNVV 300
           SICTRSYNLDMGKCVHLYVEITGIEFDQILRNALLDMYAKCGDLLSARTIFDRMIDKNVV
Sbjct: 241 SICTRSYNLDMGKCVHLYVEITGIEFDQILRNALLDMYAKCGDLLSARTIFDRMIDKNVV 300

Query: 301 SHTSMISAYSKHGLFRYAREVFDQIPEKNVISWNSMISCYVQEGRCKEALLLFQQMCETT 360
           SHTSMISAYSKHGLFRYAREVFDQIPEKNVISWNSMISCYVQEGRCKEALLLFQQMCETT
Sbjct: 301 SHTSMISAYSKHGLFRYAREVFDQIPEKNVISWNSMISCYVQEGRCKEALLLFQQMCETT 360

Query: 361 IMPDEATLVSVLSACSQIGDLAMGKKAHCYICSNNIMITATLSNSLIDMYAKCGALETAM 420
           IMPDEATLVSVLSACSQIGDLAMGKKAHCYICSNNIMITATLSNSLIDMYAKCGALETAM
Sbjct: 361 IMPDEATLVSVLSACSQIGDLAMGKKAHCYICSNNIMITATLSNSLIDMYAKCGALETAM 420

Query: 421 DFFFESKDKNLVSWNVIIQALALHGYGLHALKLFNMMHTSGIWPDEITFTGLLSACSHSG 480
           DFFFESKDKNLVSWNVIIQALALHGYGLHALKLFNMMHTSGIWPDEITFTGLLSACSHSG
Sbjct: 421 DFFFESKDKNLVSWNVIIQALALHGYGLHALKLFNMMHTSGIWPDEITFTGLLSACSHSG 480

Query: 481 LVDMGRYLFERMSSVYGILPEIEHYACMVDLLGRGGLLQEAVKLIGGMPMKPDVVVWGAM 540
           LVDMGRYLFERMSSVYGILPEIEHYACMVDLLGRGGLLQEAVKLIGGMPMKPDVVVWGAM
Sbjct: 481 LVDMGRYLFERMSSVYGILPEIEHYACMVDLLGRGGLLQEAVKLIGGMPMKPDVVVWGAM 540

Query: 541 LGGCRTYGNVDIGNQILKQVLELETYSSGLYVLLSNIYFEAKRWKEVRNIRKLMNEHGII 600
           LGGCRTYGNVDIGNQILKQVLELETYSSGLYVLLSNIYFEAKRWKEVRNIRKLMNEHGII
Sbjct: 541 LGGCRTYGNVDIGNQILKQVLELETYSSGLYVLLSNIYFEAKRWKEVRNIRKLMNEHGII 600

Query: 601 KCKAVSFIEIDECITEFMVDDKRHETSGIYPLLDQLTDHLRSVGHLSNNSILISDSEG 659
           KCKAVSFIEIDECITEFMVDDKRHETSGIYPLLDQLTDHLRSVGHLSNNSILISDSEG
Sbjct: 601 KCKAVSFIEIDECITEFMVDDKRHETSGIYPLLDQLTDHLRSVGHLSNNSILISDSEG 658

BLAST of CmoCh20G011810 vs. NCBI nr
Match: KAG7011190.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1331.6 bits (3445), Expect = 0.0e+00
Identity = 655/658 (99.54%), Postives = 655/658 (99.54%), Query Frame = 0

Query: 1   MFFSRLNRSVFRFHSFPAIPASKSGDFKSPVHQSLHLSLERCSSMRQLKVLHAQIILQGL 60
           MFFSRLNRSVFRFHSFPAIPASKSGDFKSPVHQSLHLSLERCSSMRQLKVLHAQIILQGL
Sbjct: 1   MFFSRLNRSVFRFHSFPAIPASKSGDFKSPVHQSLHLSLERCSSMRQLKVLHAQIILQGL 60

Query: 61  VSETLTLGKLVSFCAVSQAGDLHYAQLVFDHHLQPNKFMFNCLIRGYSTSQHPIKAIVLY 120
           VSETLTLGKLVSFCAVSQAGDLHYAQLVFDHHLQPNKFMFNCLIRGYSTSQHPIKAIVLY
Sbjct: 61  VSETLTLGKLVSFCAVSQAGDLHYAQLVFDHHLQPNKFMFNCLIRGYSTSQHPIKAIVLY 120

Query: 121 FKMMRSGFLPNQFTLPFVLKACASQLAYWEVLLVHCHTIRLGILSHVCVQNALINAYAVC 180
           FKMMRSGFLPNQFTLPFVLKACASQLAYWEVLLVHCHTIRLGILSHVCVQNALINAYAVC
Sbjct: 121 FKMMRSGFLPNQFTLPFVLKACASQLAYWEVLLVHCHTIRLGILSHVCVQNALINAYAVC 180

Query: 181 GFVQCARQLFDEMSHRTLVSWNSIIGGYSRNGFCKEAFLLFRDMRVWGFQPDLFTLVHLF 240
           GFVQCARQLFDEMSHRTLVSWNSIIGGYSRNGFCKEAFLLFRDMRVWGFQPDLFTLVHLF
Sbjct: 181 GFVQCARQLFDEMSHRTLVSWNSIIGGYSRNGFCKEAFLLFRDMRVWGFQPDLFTLVHLF 240

Query: 241 SICTRSYNLDMGKCVHLYVEITGIEFDQILRNALLDMYAKCGDLLSARTIFDRMIDKNVV 300
           SICTRSYNLDMGKCVHLYVEITGIEFDQILRNALLDMYAKCGDLLSARTIFDRMIDKNVV
Sbjct: 241 SICTRSYNLDMGKCVHLYVEITGIEFDQILRNALLDMYAKCGDLLSARTIFDRMIDKNVV 300

Query: 301 SHTSMISAYSKHGLFRYAREVFDQIPEKNVISWNSMISCYVQEGRCKEALLLFQQMCETT 360
           SHTSMISAYSKHGLFRYAREVFDQIPEKNVISWNSMISCYVQEGRCKEALLLFQQMCETT
Sbjct: 301 SHTSMISAYSKHGLFRYAREVFDQIPEKNVISWNSMISCYVQEGRCKEALLLFQQMCETT 360

Query: 361 IMPDEATLVSVLSACSQIGDLAMGKKAHCYICSNNIMITATLSNSLIDMYAKCGALETAM 420
           IMPDEATLVSVLSACSQIGDLAMGKKAHCYICSNNIMITATLSNSLIDMYAKCGALETAM
Sbjct: 361 IMPDEATLVSVLSACSQIGDLAMGKKAHCYICSNNIMITATLSNSLIDMYAKCGALETAM 420

Query: 421 DFFFESKDKNLVSWNVIIQALALHGYGLHALKLFNMMHTSGIWPDEITFTGLLSACSHSG 480
           D FFESKDKNLVSWNVIIQALALHGYGLHALKLFNMMHTSGIWPDEITFTGLLSACSHSG
Sbjct: 421 DLFFESKDKNLVSWNVIIQALALHGYGLHALKLFNMMHTSGIWPDEITFTGLLSACSHSG 480

Query: 481 LVDMGRYLFERMSSVYGILPEIEHYACMVDLLGRGGLLQEAVKLIGGMPMKPDVVVWGAM 540
           LVDMGRYLFERMSSVYGILPEIEHYACMVDLLGRGGLLQEAVKLIGGMPMKPDVVVWGAM
Sbjct: 481 LVDMGRYLFERMSSVYGILPEIEHYACMVDLLGRGGLLQEAVKLIGGMPMKPDVVVWGAM 540

Query: 541 LGGCRTYGNVDIGNQILKQVLELETYSSGLYVLLSNIYFEAKRWKEVRNIRKLMNEHGII 600
           LGGCRTYGNVDIGNQILKQVLELETYSSGLYVLLSNIYFEAKRWKEVRNIRKLMNEHGII
Sbjct: 541 LGGCRTYGNVDIGNQILKQVLELETYSSGLYVLLSNIYFEAKRWKEVRNIRKLMNEHGII 600

Query: 601 KCKAVSFIEIDECITEFMVDDKRHETSGIYPLLDQLTDHLRSVGHLSNNSILISDSEG 659
           KCKAVSFIEIDECITEFMVDDKRHETSGIYPLLDQLTD LRSVGHLSNNSILISD EG
Sbjct: 601 KCKAVSFIEIDECITEFMVDDKRHETSGIYPLLDQLTDQLRSVGHLSNNSILISDFEG 658

BLAST of CmoCh20G011810 vs. NCBI nr
Match: XP_022971672.1 (pentatricopeptide repeat-containing protein At2g22410, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 1305.4 bits (3377), Expect = 0.0e+00
Identity = 640/658 (97.26%), Postives = 645/658 (98.02%), Query Frame = 0

Query: 1   MFFSRLNRSVFRFHSFPAIPASKSGDFKSPVHQSLHLSLERCSSMRQLKVLHAQIILQGL 60
           MFFSRLNRSVFRFHS PAIPASKS DFKSPVHQSLHLSLERCSSMRQLKVLHAQIILQGL
Sbjct: 9   MFFSRLNRSVFRFHSLPAIPASKSRDFKSPVHQSLHLSLERCSSMRQLKVLHAQIILQGL 68

Query: 61  VSETLTLGKLVSFCAVSQAGDLHYAQLVFDHHLQPNKFMFNCLIRGYSTSQHPIKAIVLY 120
           VSETLTLGKLVSFCAVSQAGDL YAQLVFDHHLQPNKFMFNCLIRGYSTSQHPI AI LY
Sbjct: 69  VSETLTLGKLVSFCAVSQAGDLPYAQLVFDHHLQPNKFMFNCLIRGYSTSQHPINAIFLY 128

Query: 121 FKMMRSGFLPNQFTLPFVLKACASQLAYWEVLLVHCHTIRLGILSHVCVQNALINAYAVC 180
           FKMMRSGFLPNQFTLPFVLKACASQLAYWEVLLVHCH IRLGILSHVCVQNALIN YAVC
Sbjct: 129 FKMMRSGFLPNQFTLPFVLKACASQLAYWEVLLVHCHAIRLGILSHVCVQNALINVYAVC 188

Query: 181 GFVQCARQLFDEMSHRTLVSWNSIIGGYSRNGFCKEAFLLFRDMRVWGFQPDLFTLVHLF 240
           GFVQCARQLFDEMSH+TLVSWNSIIGGYSRNGFCKEAFLLFRDMRVWGFQPDLFTLVHLF
Sbjct: 189 GFVQCARQLFDEMSHKTLVSWNSIIGGYSRNGFCKEAFLLFRDMRVWGFQPDLFTLVHLF 248

Query: 241 SICTRSYNLDMGKCVHLYVEITGIEFDQILRNALLDMYAKCGDLLSARTIFDRMIDKNVV 300
           SICTRSYNLDMGKCVHLYVEITG EFDQILRNA+LDMYAKCGDLLSARTIFDRMIDKNVV
Sbjct: 249 SICTRSYNLDMGKCVHLYVEITGTEFDQILRNAMLDMYAKCGDLLSARTIFDRMIDKNVV 308

Query: 301 SHTSMISAYSKHGLFRYAREVFDQIPEKNVISWNSMISCYVQEGRCKEALLLFQQMCETT 360
           SHTSMISAYSKHGLFRYAREVFDQIPEKNVISWNSMISCYVQEGRCKEALLLFQQMCETT
Sbjct: 309 SHTSMISAYSKHGLFRYAREVFDQIPEKNVISWNSMISCYVQEGRCKEALLLFQQMCETT 368

Query: 361 IMPDEATLVSVLSACSQIGDLAMGKKAHCYICSNNIMITATLSNSLIDMYAKCGALETAM 420
           IMPDEATLVSVLSACSQIGDLAMGKKAHCYICSNNIMITATLSNSLIDMYAKCGALET M
Sbjct: 369 IMPDEATLVSVLSACSQIGDLAMGKKAHCYICSNNIMITATLSNSLIDMYAKCGALETTM 428

Query: 421 DFFFESKDKNLVSWNVIIQALALHGYGLHALKLFNMMHTSGIWPDEITFTGLLSACSHSG 480
           DFFFESKDKNLVSWNVIIQALALHGYGLHALKLFNMMHTSGIWPDEITFTGLLSACSHSG
Sbjct: 429 DFFFESKDKNLVSWNVIIQALALHGYGLHALKLFNMMHTSGIWPDEITFTGLLSACSHSG 488

Query: 481 LVDMGRYLFERMSSVYGILPEIEHYACMVDLLGRGGLLQEAVKLIGGMPMKPDVVVWGAM 540
           LVDMGRYLFERMSSVYGILPEIEHYACMVDLLGRGGLLQEAVKLIGGMPMKPDVVVWGAM
Sbjct: 489 LVDMGRYLFERMSSVYGILPEIEHYACMVDLLGRGGLLQEAVKLIGGMPMKPDVVVWGAM 548

Query: 541 LGGCRTYGNVDIGNQILKQVLELETYSSGLYVLLSNIYFEAKRWKEVRNIRKLMNEHGII 600
           LG CRTYGNVDIGNQILKQVLELETYSSGLYVLLSNIYFEA RWKEV+NIRKLMN+HGII
Sbjct: 549 LGACRTYGNVDIGNQILKQVLELETYSSGLYVLLSNIYFEANRWKEVKNIRKLMNDHGII 608

Query: 601 KCKAVSFIEIDECITEFMVDDKRHETSGIYPLLDQLTDHLRSVGHLSNNSILISDSEG 659
           KCKAVSFIEIDECITEFMVDDKRHETSGIYPLLDQLTDHLRSVGHLSNNSI +SD EG
Sbjct: 609 KCKAVSFIEIDECITEFMVDDKRHETSGIYPLLDQLTDHLRSVGHLSNNSIPVSDFEG 666

BLAST of CmoCh20G011810 vs. NCBI nr
Match: XP_023512538.1 (pentatricopeptide repeat-containing protein At2g22410, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1305.0 bits (3376), Expect = 0.0e+00
Identity = 642/658 (97.57%), Postives = 647/658 (98.33%), Query Frame = 0

Query: 1   MFFSRLNRSVFRFHSFPAIPASKSGDFKSPVHQSLHLSLERCSSMRQLKVLHAQIILQGL 60
           MFFSRL+RSVFRFHS PAIPASKSGDFKSPVHQSLHLSLERCSSMR LKVLHAQIILQGL
Sbjct: 35  MFFSRLSRSVFRFHSLPAIPASKSGDFKSPVHQSLHLSLERCSSMRLLKVLHAQIILQGL 94

Query: 61  VSETLTLGKLVSFCAVSQAGDLHYAQLVFDHHLQPNKFMFNCLIRGYSTSQHPIKAIVLY 120
           VSETLTLGKLVSFCAVSQAGDLHYAQLVFDHHLQPNKFMFNCLIRGYSTSQHPI AI LY
Sbjct: 95  VSETLTLGKLVSFCAVSQAGDLHYAQLVFDHHLQPNKFMFNCLIRGYSTSQHPINAIFLY 154

Query: 121 FKMMRSGFLPNQFTLPFVLKACASQLAYWEVLLVHCHTIRLGILSHVCVQNALINAYAVC 180
           FKMMRSGFLPNQFTLPFVLKACASQLAYWEVLLVHCH IRLGILSHVCVQNALIN YAVC
Sbjct: 155 FKMMRSGFLPNQFTLPFVLKACASQLAYWEVLLVHCHAIRLGILSHVCVQNALINVYAVC 214

Query: 181 GFVQCARQLFDEMSHRTLVSWNSIIGGYSRNGFCKEAFLLFRDMRVWGFQPDLFTLVHLF 240
           GFVQCARQLFDEMSHRTLVSWNSIIGGYSRNGFCKEAFLL+RDMRVWGFQPDLFTLVHLF
Sbjct: 215 GFVQCARQLFDEMSHRTLVSWNSIIGGYSRNGFCKEAFLLYRDMRVWGFQPDLFTLVHLF 274

Query: 241 SICTRSYNLDMGKCVHLYVEITGIEFDQILRNALLDMYAKCGDLLSARTIFDRMIDKNVV 300
           SICTRS+NLDMGKCVHLYVEITGIEFDQILRNALLDMYAKCGDLLSARTI+DRMIDKNVV
Sbjct: 275 SICTRSHNLDMGKCVHLYVEITGIEFDQILRNALLDMYAKCGDLLSARTIYDRMIDKNVV 334

Query: 301 SHTSMISAYSKHGLFRYAREVFDQIPEKNVISWNSMISCYVQEGRCKEALLLFQQMCETT 360
           SHTSMISAYSKHGLFRYAREVFDQIP+KNVISWNSMISCYVQEGRCKEALLL QQMCETT
Sbjct: 335 SHTSMISAYSKHGLFRYAREVFDQIPDKNVISWNSMISCYVQEGRCKEALLLLQQMCETT 394

Query: 361 IMPDEATLVSVLSACSQIGDLAMGKKAHCYICSNNIMITATLSNSLIDMYAKCGALETAM 420
           IMPDEATLVSVLSACSQIGDLAMGKKAH YICSNNIMITATLSNSLIDMYAKCGALETAM
Sbjct: 395 IMPDEATLVSVLSACSQIGDLAMGKKAHYYICSNNIMITATLSNSLIDMYAKCGALETAM 454

Query: 421 DFFFESKDKNLVSWNVIIQALALHGYGLHALKLFNMMHTSGIWPDEITFTGLLSACSHSG 480
           DFFFESKDKNLVSWNVIIQALALHGYGLHALKLFNMMHTSGIWPDEITFTGLLSACSHSG
Sbjct: 455 DFFFESKDKNLVSWNVIIQALALHGYGLHALKLFNMMHTSGIWPDEITFTGLLSACSHSG 514

Query: 481 LVDMGRYLFERMSSVYGILPEIEHYACMVDLLGRGGLLQEAVKLIGGMPMKPDVVVWGAM 540
           LVDMGR LFERMSSVYGILPEIEHYACMVDLLGRGGLLQEAVKLIGGMPMKPDVVVWGAM
Sbjct: 515 LVDMGRSLFERMSSVYGILPEIEHYACMVDLLGRGGLLQEAVKLIGGMPMKPDVVVWGAM 574

Query: 541 LGGCRTYGNVDIGNQILKQVLELETYSSGLYVLLSNIYFEAKRWKEVRNIRKLMNEHGII 600
           LG CR YGNVDIGNQILKQVLELETYSSGLYVLLSNIYFEAKRWKEVRNIRKLMNEHGII
Sbjct: 575 LGACRIYGNVDIGNQILKQVLELETYSSGLYVLLSNIYFEAKRWKEVRNIRKLMNEHGII 634

Query: 601 KCKAVSFIEIDECITEFMVDDKRHETSGIYPLLDQLTDHLRSVGHLSNNSILISDSEG 659
           KCKAVSFIEIDECITEFMVDDKRHETSGIYPLLDQLTDHLRSVGHLSNNSILISDSEG
Sbjct: 635 KCKAVSFIEIDECITEFMVDDKRHETSGIYPLLDQLTDHLRSVGHLSNNSILISDSEG 692

BLAST of CmoCh20G011810 vs. TAIR 10
Match: AT2G22410.1 (SLOW GROWTH 1 )

HSP 1 Score: 486.9 bits (1252), Expect = 2.6e-137
Identity = 271/669 (40.51%), Postives = 407/669 (60.84%), Query Frame = 0

Query: 5   RLNRSVF-----RFHSFP---AIPASKSGDFKSPVHQSLHLSLERCSSMRQLKVLHAQII 64
           +LNRS++     R  S P     P + +      +H  L   LE+C  +  LK + AQ+I
Sbjct: 18  KLNRSLYSHSQRRTRSLPHHRDKPINWNSTHSFVLHNPLLSLLEKCKLLLHLKQIQAQMI 77

Query: 65  LQGLVSETLTLGKLVSFCAVSQAGDLHYAQLVFDHHLQPNKFMFNCLIRGYSTSQHPIKA 124
           + GL+ +     +L++FCA+S++  L Y+  +      PN F +N  IRG+S S++P ++
Sbjct: 78  INGLILDPFASSRLIAFCALSESRYLDYSVKILKGIENPNIFSWNVTIRGFSESENPKES 137

Query: 125 IVLYFKMMRSGFL---PNQFTLPFVLKACA----SQLAYWEVLLVHCHTIRLGILSHVCV 184
            +LY +M+R G     P+ FT P + K CA    S L +  ++L H   +RL ++SH  V
Sbjct: 138 FLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGH--MILGHVLKLRLELVSH--V 197

Query: 185 QNALINAYAVCGFVQCARQLFDEMSHRTLVSWNSIIGGYSRNGFCKEAFLLFRDMRVWGF 244
            NA I+ +A CG ++ AR++FDE   R LVSWN +I GY + G  ++A  +++ M   G 
Sbjct: 198 HNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGV 257

Query: 245 QPDLFTLVHLFSICTRSYNLDMGKCVHLYVEITGIEFDQILRNALLDMYAKCGDLLSART 304
           +PD  T++ L S C+   +L+ GK  + YV+  G+     L NAL+DM++KCGD+  AR 
Sbjct: 258 KPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARR 317

Query: 305 IFDRMIDKNVVSHTSMISAYSKHGLFRYAREVFDQIPEKNVISWNSMISCYVQEGRCKEA 364
           IFD +  + +VS T+MIS Y++ GL   +R++FD + EK+V+ WN+MI   VQ  R ++A
Sbjct: 318 IFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDA 377

Query: 365 LLLFQQMCETTIMPDEATLVSVLSACSQIGDLAMGKKAHCYICSNNIMITATLSNSLIDM 424
           L LFQ+M  +   PDE T++  LSACSQ+G L +G   H YI   ++ +   L  SL+DM
Sbjct: 378 LALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDM 437

Query: 425 YAKCGALETAMDFFFESKDKNLVSWNVIIQALALHGYGLHALKLFNMMHTSGIWPDEITF 484
           YAKCG +  A+  F   + +N +++  II  LALHG    A+  FN M  +GI PDEITF
Sbjct: 438 YAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITF 497

Query: 485 TGLLSACSHSGLVDMGRYLFERMSSVYGILPEIEHYACMVDLLGRGGLLQEAVKLIGGMP 544
            GLLSAC H G++  GR  F +M S + + P+++HY+ MVDLLGR GLL+EA +L+  MP
Sbjct: 498 IGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMP 557

Query: 545 MKPDVVVWGAMLGGCRTYGNVDIGNQILKQVLELETYSSGLYVLLSNIYFEAKRWKEVRN 604
           M+ D  VWGA+L GCR +GNV++G +  K++LEL+   SG+YVLL  +Y EA  W++ + 
Sbjct: 558 MEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKR 617

Query: 605 IRKLMNEHGIIKCKAVSFIEIDECITEFMVDDK-RHETSGIYPLLDQLTDHLRSVGHLSN 658
            R++MNE G+ K    S IE++  + EF+V DK R E+  IY  L  L  H+R     S+
Sbjct: 618 ARRMMNERGVEKIPGCSSIEVNGIVCEFIVRDKSRPESEKIYDRLHCLGRHMR-----SS 677

BLAST of CmoCh20G011810 vs. TAIR 10
Match: AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 450.7 bits (1158), Expect = 2.1e-126
Identity = 253/680 (37.21%), Postives = 385/680 (56.62%), Query Frame = 0

Query: 14  HSFPAIPASKSGDFKS-PVHQSLHLSLERCSSMRQLKVLHAQIILQGLVSETLTLGKLVS 73
           + F  +P+S    + S   H SL L L  C +++ L+++HAQ+I  GL +    L KL+ 
Sbjct: 15  YPFHFLPSSSDPPYDSIRNHPSLSL-LHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIE 74

Query: 74  FCAVSQAGD-LHYAQLVFDHHLQPNKFMFNCLIRGYSTSQHPIKAIVLYFKMMRSGFLPN 133
           FC +S   + L YA  VF    +PN  ++N + RG++ S  P+ A+ LY  M+  G LPN
Sbjct: 75  FCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPN 134

Query: 134 QFTLPFVLKACASQLAYWEVLLVHCHTIRLGI---------LSHVCVQN----------- 193
            +T PFVLK+CA   A+ E   +H H ++LG          L  + VQN           
Sbjct: 135 SYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFD 194

Query: 194 -----------ALINAYAVCGFVQCARQLFDEMSHRTLVSWNSIIGGYSRNGFCKEAFLL 253
                      ALI  YA  G+++ A++LFDE+  + +VSWN++I GY+  G  KEA  L
Sbjct: 195 KSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALEL 254

Query: 254 FRDMRVWGFQPDLFTLVHLFSICTRSYNLDMGKCVHLYVEITGIEFDQILRNALLDMYAK 313
           F+DM     +PD  T+V + S C +S ++++G+ VHL+++  G   +  + NAL+D+Y+K
Sbjct: 255 FKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSK 314

Query: 314 CGDLLSARTIFDRMIDKNVVSHTSMISAYSKHGLFRYAREVFDQIPEKNVISWNSMISCY 373
           CG+L +A  +F+R                               +P K+VISWN++I  Y
Sbjct: 315 CGELETACGLFER-------------------------------LPYKDVISWNTLIGGY 374

Query: 374 VQEGRCKEALLLFQQMCETTIMPDEATLVSVLSACSQIGDLAMGKKAHCYICS--NNIMI 433
                 KEALLLFQ+M  +   P++ T++S+L AC+ +G + +G+  H YI      +  
Sbjct: 375 THMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTN 434

Query: 434 TATLSNSLIDMYAKCGALETAMDFFFESKDKNLVSWNVIIQALALHGYGLHALKLFNMMH 493
            ++L  SLIDMYAKCG +E A   F     K+L SWN +I   A+HG    +  LF+ M 
Sbjct: 435 ASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMR 494

Query: 494 TSGIWPDEITFTGLLSACSHSGLVDMGRYLFERMSSVYGILPEIEHYACMVDLLGRGGLL 553
             GI PD+ITF GLLSACSHSG++D+GR++F  M+  Y + P++EHY CM+DLLG  GL 
Sbjct: 495 KIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLF 554

Query: 554 QEAVKLIGGMPMKPDVVVWGAMLGGCRTYGNVDIGNQILKQVLELETYSSGLYVLLSNIY 613
           +EA ++I  M M+PD V+W ++L  C+ +GNV++G    + ++++E  + G YVLLSNIY
Sbjct: 555 KEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIY 614

Query: 614 FEAKRWKEVRNIRKLMNEHGIIKCKAVSFIEIDECITEFMVDDKRH-ETSGIYPLLDQLT 658
             A RW EV   R L+N+ G+ K    S IEID  + EF++ DK H     IY +L+++ 
Sbjct: 615 ASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEME 662

BLAST of CmoCh20G011810 vs. TAIR 10
Match: AT2G29760.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 442.2 bits (1136), Expect = 7.3e-124
Identity = 234/617 (37.93%), Postives = 369/617 (59.81%), Query Frame = 0

Query: 33  QSLHLSL-ERCSSMRQLKVLHAQIILQGLVSETLTLGKLVSFCAVSQAGDLHYAQLVFDH 92
           +S H+SL ERC S+RQLK  H  +I  G  S+  +  KL +  A+S    L YA+ VFD 
Sbjct: 30  RSRHISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDE 89

Query: 93  HLQPNKFMFNCLIRGYSTSQHPIKAIVLYFKMM-RSGFLPNQFTLPFVLKACASQLAYWE 152
             +PN F +N LIR Y++   P+ +I  +  M+  S   PN++T PF++KA A   +   
Sbjct: 90  IPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSL 149

Query: 153 VLLVHCHTIRLGILSHVCVQNALINAYAVCGFVQCARQLFDEMSHRTLVSWNSIIGGYSR 212
              +H   ++  + S V V N+LI+ Y  CG +  A ++F  +  + +VSWNS+I G+ +
Sbjct: 150 GQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQ 209

Query: 213 NGFCKEAFLLFRDMRVWGFQPDLFTLVHLFSICTRSYNLDMGKCVHLYVEITGIEFDQIL 272
            G   +A  LF+ M     +    T+V + S C +  NL+ G+ V  Y+E   +  +  L
Sbjct: 210 KGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTL 269

Query: 273 RNALLDMYAKCGDLLSARTIFDRMIDKNVVSHTSMISAYSKHGLFRYAREVFDQIPEKNV 332
            NA+LDMY KCG +  A+ +FD M +K+ V+ T+M+  Y+    +  AREV + +P+K++
Sbjct: 270 ANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDI 329

Query: 333 ISWNSMISCYVQEGRCKEALLLFQQM-CETTIMPDEATLVSVLSACSQIGDLAMGKKAHC 392
           ++WN++IS Y Q G+  EAL++F ++  +  +  ++ TLVS LSAC+Q+G L +G+  H 
Sbjct: 330 VAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHS 389

Query: 393 YICSNNIMITATLSNSLIDMYAKCGALETAMDFFFESKDKNLVSWNVIIQALALHGYGLH 452
           YI  + I +   ++++LI MY+KCG LE + + F   + +++  W+ +I  LA+HG G  
Sbjct: 390 YIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNE 449

Query: 453 ALKLFNMMHTSGIWPDEITFTGLLSACSHSGLVDMGRYLFERMSSVYGILPEIEHYACMV 512
           A+ +F  M  + + P+ +TFT +  ACSH+GLVD    LF +M S YGI+PE +HYAC+V
Sbjct: 450 AVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIV 509

Query: 513 DLLGRGGLLQEAVKLIGGMPMKPDVVVWGAMLGGCRTYGNVDIGNQILKQVLELETYSSG 572
           D+LGR G L++AVK I  MP+ P   VWGA+LG C+ + N+++      ++LELE  + G
Sbjct: 510 DVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDG 569

Query: 573 LYVLLSNIYFEAKRWKEVRNIRKLMNEHGIIKCKAVSFIEIDECITEFMVDDKRHETS-G 632
            +VLLSNIY +  +W+ V  +RK M   G+ K    S IEID  I EF+  D  H  S  
Sbjct: 570 AHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEK 629

Query: 633 IYPLLDQLTDHLRSVGH 646
           +Y  L ++ + L+S G+
Sbjct: 630 VYGKLHEVMEKLKSNGY 646

BLAST of CmoCh20G011810 vs. TAIR 10
Match: AT4G14820.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 426.4 bits (1095), Expect = 4.2e-119
Identity = 231/621 (37.20%), Postives = 361/621 (58.13%), Query Frame = 0

Query: 39  LERCSSMRQLKVLHAQIILQGLVSETLTLGKLVSFCAVSQAGDLHYAQLVFDH-HLQPNK 98
           L  C S+  +K LHA  IL+ +++  L    L +    S + +L YA  VF      P  
Sbjct: 19  LSFCKSLNHIKQLHAH-ILRTVINHKLN-SFLFNLSVSSSSINLSYALNVFSSIPSPPES 78

Query: 99  FMFNCLIRGYSTSQHPIKAIVLYFKMMRSGFLPNQFTLPFVLKACASQLAYWEVLLVHCH 158
            +FN  +R  S S  P   I+ Y ++   G   +QF+   +LKA +   A +E + +H  
Sbjct: 79  IVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGV 138

Query: 159 TIRLGILSHVCVQNALINAYAVCGFVQCARQLFDEMSHRTLVSWNSIIGGYSRNGFCKEA 218
             ++  L    V+   ++ YA CG +  AR +FDEMSHR +V+WN++I  Y R G   EA
Sbjct: 139 AFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEA 198

Query: 219 FLLFRDMRVWGFQPDLFTLVHLFSICTRSYNLDMGKCVHLYVEITGIEFDQILRNALLDM 278
           F LF +M+     PD   L ++ S C R+ N+   + ++ ++    +  D  L  AL+ M
Sbjct: 199 FKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTM 258

Query: 279 YAKCGDLLSARTIFDRMIDKNVVSHTSMISAYSKHGLFRYAREVFDQIPEKNVISWNSMI 338
           YA  G +  AR  F +M  +N+   T+M+S YSK G    A+ +FDQ  +K+++ W +MI
Sbjct: 259 YAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMI 318

Query: 339 SCYVQEGRCKEALLLFQQMCETTIMPDEATLVSVLSACSQIGDLAMGKKAHCYICSNNIM 398
           S YV+    +EAL +F++MC + I PD  ++ SV+SAC+ +G L   K  H  I  N + 
Sbjct: 319 SAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLE 378

Query: 399 ITATLSNSLIDMYAKCGALETAMDFFFESKDKNLVSWNVIIQALALHGYGLHALKLFNMM 458
              +++N+LI+MYAKCG L+   D F +   +N+VSW+ +I AL++HG    AL LF  M
Sbjct: 379 SELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARM 438

Query: 459 HTSGIWPDEITFTGLLSACSHSGLVDMGRYLFERMSSVYGILPEIEHYACMVDLLGRGGL 518
               + P+E+TF G+L  CSHSGLV+ G+ +F  M+  Y I P++EHY CMVDL GR  L
Sbjct: 439 KQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANL 498

Query: 519 LQEAVKLIGGMPMKPDVVVWGAMLGGCRTYGNVDIGNQILKQVLELETYSSGLYVLLSNI 578
           L+EA+++I  MP+  +VV+WG+++  CR +G +++G    K++LELE    G  VL+SNI
Sbjct: 499 LREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNI 558

Query: 579 YFEAKRWKEVRNIRKLMNEHGIIKCKAVSFIEIDECITEFMVDDKRHETSG-IYPLLDQL 638
           Y   +RW++VRNIR++M E  + K K +S I+ +    EF++ DKRH+ S  IY  LD++
Sbjct: 559 YAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEV 618

Query: 639 TDHLRSVGHLSNNSILISDSE 658
              L+  G++ +   ++ D E
Sbjct: 619 VSKLKLAGYVPDCGSVLVDVE 637

BLAST of CmoCh20G011810 vs. TAIR 10
Match: AT3G29230.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 418.3 bits (1074), Expect = 1.1e-116
Identity = 229/605 (37.85%), Postives = 355/605 (58.68%), Query Frame = 0

Query: 39  LERCSSMRQLKVLHAQIILQGLVSETLTLGKLVSFCAVSQAGDLHYAQLVFDHHLQPNKF 98
           L +C+++ Q+K LHAQII + L  +     KL+S  A+S     + A  VF+   +PN  
Sbjct: 26  LPKCANLNQVKQLHAQIIRRNLHEDLHIAPKLIS--ALSLCRQTNLAVRVFNQVQEPNVH 85

Query: 99  MFNCLIRGYSTSQHPIKAIVLYFKMMRSGFLPNQFTLPFVLKACASQLAYWEVLLVHCHT 158
           + N LIR ++ +  P +A  ++ +M R G   + FT PF+LKAC+ Q     V ++H H 
Sbjct: 86  LCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHI 145

Query: 159 IRLGILSHVCVQNALINAYAVCG--FVQCARQLFDEMSHRTLVSWNSIIGGYSRNGFCKE 218
            +LG+ S + V NALI+ Y+ CG   V+ A +LF++MS R  VSWNS++GG  + G  ++
Sbjct: 146 EKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRD 205

Query: 219 AFLLFRDMRVWGFQPDLFTLVHLFSICTRSYNLDMGKCVHLYVEITGIEFDQILRNALLD 278
           A  LF +M                                        + D I  N +LD
Sbjct: 206 ARRLFDEMP---------------------------------------QRDLISWNTMLD 265

Query: 279 MYAKCGDLLSARTIFDRMIDKNVVSHTSMISAYSKHGLFRYAREVFDQ--IPEKNVISWN 338
            YA+C ++  A  +F++M ++N VS ++M+  YSK G    AR +FD+  +P KNV++W 
Sbjct: 266 GYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWT 325

Query: 339 SMISCYVQEGRCKEALLLFQQMCETTIMPDEATLVSVLSACSQIGDLAMGKKAHCYICSN 398
            +I+ Y ++G  KEA  L  QM  + +  D A ++S+L+AC++ G L++G + H  +  +
Sbjct: 326 IIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRS 385

Query: 399 NIMITATLSNSLIDMYAKCGALETAMDFFFESKDKNLVSWNVIIQALALHGYGLHALKLF 458
           N+   A + N+L+DMYAKCG L+ A D F +   K+LVSWN ++  L +HG+G  A++LF
Sbjct: 386 NLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELF 445

Query: 459 NMMHTSGIWPDEITFTGLLSACSHSGLVDMGRYLFERMSSVYGILPEIEHYACMVDLLGR 518
           + M   GI PD++TF  +L +C+H+GL+D G   F  M  VY ++P++EHY C+VDLLGR
Sbjct: 446 SRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGR 505

Query: 519 GGLLQEAVKLIGGMPMKPDVVVWGAMLGGCRTYGNVDIGNQILKQVLELETYSSGLYVLL 578
            G L+EA+K++  MPM+P+VV+WGA+LG CR +  VDI  ++L  +++L+    G Y LL
Sbjct: 506 VGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLL 565

Query: 579 SNIYFEAKRWKEVRNIRKLMNEHGIIKCKAVSFIEIDECITEFMVDDKRHETSG-IYPLL 638
           SNIY  A+ W+ V +IR  M   G+ K    S +E+++ I EF V DK H  S  IY +L
Sbjct: 566 SNIYAAAEDWEGVADIRSKMKSMGVEKPSGASSVELEDGIHEFTVFDKSHPKSDQIYQML 589

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9SJZ33.7e-13640.51Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidop... [more]
Q9LN012.9e-12537.21Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... [more]
O823801.0e-12237.93Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop... [more]
O233375.9e-11837.20Pentatricopeptide repeat-containing protein At4g14820 OS=Arabidopsis thaliana OX... [more]
Q9LS721.6e-11537.85Pentatricopeptide repeat-containing protein At3g29230 OS=Arabidopsis thaliana OX... [more]
Match NameE-valueIdentityDescription
A0A6J1EJQ70.0e+00100.00pentatricopeptide repeat-containing protein At2g22410, mitochondrial-like OS=Cuc... [more]
A0A6J1I2L80.0e+0097.26pentatricopeptide repeat-containing protein At2g22410, mitochondrial-like OS=Cuc... [more]
A0A5A7TQY70.0e+0081.11Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A6J1D6T60.0e+0080.88pentatricopeptide repeat-containing protein At2g22410, mitochondrial-like OS=Mom... [more]
A0A1S3C6H91.5e-30581.24pentatricopeptide repeat-containing protein At2g22410, mitochondrial-like OS=Cuc... [more]
Match NameE-valueIdentityDescription
XP_022928049.10.0e+00100.00pentatricopeptide repeat-containing protein At2g22410, mitochondrial-like [Cucur... [more]
KAG6571425.10.0e+0099.85Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... [more]
KAG7011190.10.0e+0099.54Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... [more]
XP_022971672.10.0e+0097.26pentatricopeptide repeat-containing protein At2g22410, mitochondrial-like [Cucur... [more]
XP_023512538.10.0e+0097.57pentatricopeptide repeat-containing protein At2g22410, mitochondrial-like [Cucur... [more]
Match NameE-valueIdentityDescription
AT2G22410.12.6e-13740.51SLOW GROWTH 1 [more]
AT1G08070.12.1e-12637.21Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT2G29760.17.3e-12437.93Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT4G14820.14.2e-11937.20Pentatricopeptide repeat (PPR) superfamily protein [more]
AT3G29230.11.1e-11637.85Tetratricopeptide repeat (TPR)-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 300..329
e-value: 1.8E-4
score: 19.5
coord: 272..300
e-value: 9.6E-4
score: 17.2
coord: 331..364
e-value: 7.8E-8
score: 30.0
coord: 99..131
e-value: 1.6E-5
score: 22.7
coord: 432..465
e-value: 2.4E-4
score: 19.1
coord: 467..500
e-value: 6.6E-4
score: 17.7
coord: 199..232
e-value: 1.5E-7
score: 29.2
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 272..299
e-value: 6.1E-4
score: 19.9
coord: 171..194
e-value: 0.0019
score: 18.3
coord: 505..529
e-value: 0.84
score: 10.0
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 95..143
e-value: 4.3E-7
score: 30.0
coord: 328..375
e-value: 4.2E-10
score: 39.7
coord: 198..241
e-value: 5.3E-9
score: 36.1
coord: 429..477
e-value: 3.2E-9
score: 36.8
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 197..231
score: 11.816339
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 430..464
score: 9.810421
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 267..301
score: 9.492543
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 329..363
score: 11.947875
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 96..130
score: 10.05157
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 256..402
e-value: 6.4E-32
score: 113.1
coord: 403..616
e-value: 2.5E-39
score: 137.5
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 149..255
e-value: 3.8E-20
score: 74.0
coord: 26..148
e-value: 1.2E-10
score: 43.1
NoneNo IPR availablePANTHERPTHR24015OS07G0578800 PROTEIN-RELATEDcoord: 316..359
NoneNo IPR availablePANTHERPTHR24015OS07G0578800 PROTEIN-RELATEDcoord: 40..317
NoneNo IPR availablePANTHERPTHR24015:SF1985OS09G0555400 PROTEINcoord: 40..317
NoneNo IPR availablePANTHERPTHR24015:SF1985OS09G0555400 PROTEINcoord: 316..359
NoneNo IPR availablePANTHERPTHR24015:SF1985OS09G0555400 PROTEINcoord: 350..648
NoneNo IPR availablePANTHERPTHR24015OS07G0578800 PROTEIN-RELATEDcoord: 350..648

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh20G011810.1CmoCh20G011810.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009451 RNA modification
cellular_component GO:0043231 intracellular membrane-bounded organelle
molecular_function GO:0005515 protein binding
molecular_function GO:0003723 RNA binding