CmoCh20G011630 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh20G011630
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionGag/pol protein
LocationCmo_Chr20: 11456119 .. 11461512 (-)
RNA-Seq ExpressionCmoCh20G011630
SyntenyCmoCh20G011630
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACAAACTCAATAGTACAATTACTCGCTTCTGAGAAATTAAACGGCGACAACTACACAACTTGGAAATCAAACCTAAACACAATACTGGTCATTGATGATTTAAAGTTTGTTTTAACTAAAGAGTGTCCTCCAAACCCAAACTCAAATGCAAACCGAACAGCTCGGGATGCATATGACAGATGGATAAAGGCAAATGACAAAGCCCGAGTGTACATTCTAGCCAGCATATCTGATGTTTTGGCTAAGAAACACGATGTTATGGGTACTGCTAAAGAGATTATGGAATCTCTAAAAGGGATGTTTGGACAACCGTACTTCTCCCTTAGACATGAAGCCATAAAATACATTTACAACTGCCGTATGAAAGAAGGAACCTCAGTTAGAGAACATGTCCTGGACATGATGGTCCATTTCAATGTGGCAGAAGAAAATGAAGCTGTCATTGATGAGAAGAGTCAAGTCAGTTTTATCATGATGTCTCTTCCGAAGAGCTTCTTCCAGTTCCGCACCAATGTGGTTATGAACAAAATAGAATATAACTTGACTGCTCTTCTCAATGAGCTACAGACTTATCAGTCCCTCTTAACAAACAAGGGACAAACAGGAGAAGCAAATGTTGCCATCTCCAAGAAATTACTACGAGGATCGTCCTCCAAAAATAAGTCTGGACCTTCAACTTCTAAAGGTGTTTTGATGAAGAAGAAGGGAAAGGGGAAAAATAAGATTCCTACTAACCGCAAGAACAAGGTTCAAAAAGCAGATAAAGGAAAATGTTTCCATTGCAACGAAAACGGGCACTGGAAGAGAAATTGCCCAAAATACCTTGTAGAGAAGAAAGCCGAAAAGACACAACAAGGTAAATATGATTTACTCGTTGTAGAAATGTGTTTAGTAGAGTATGACAACTCAACTTGGATACTAGATTCAGGGGCGACTAATCATATTTGTTCTTTTTACCAGGAAACTAGCTCCTGGAGAATGCTTGCGGACGGCGAGATAACACTCAGGGTTGGAACAGGAGAGGTTGTCTCAGCAAGATCAGTGGGAAATTTAAAGTTGTTTTTTGGAGATAGATTCATTATATTAGATAATGTACTTTTTGTTCCAGGAATGAAAAGAAATCTAATATCCATCTCTTGTTTATTAGAACAGTTGTATAAAGTATCTTTTGAAATTAATGAAGTGTTCATTTGCAAAAGAGGTATTCATATTTGTTCTGCAAAACTAGAAAACAACTTATATATGTTAAAACCGAGCAAAACAAAAGCTATTTTAAATACTGAGATGTTTAAAACAGCTGAAACTCAAAATAAACGACAAAAGATTTCTCCTAATACCTATCTTTGGCATTTAAGACTAGGCCACATTAATCTCAATAGGATTGAGAGATTGGTTAAAAAAGGACTTCTAAATAAGTTAGAAGACAATTCTTTACCTCCATGTGAGTCTTGTCTTGAGGGTAAAATGACTAAACGATCATTTTGCGAAAAAGGTTATAGAACCAAAGAAACCTTAGAACTCGTGCATACAGATCTCTGTGGTCCAATGAATGTCAAAGCACGAGGAGGGTATGAATATTTCATCAGTTTTATTGATGATTATTCAAGGTATGGCTATCTTTACCTAATGCATCACAAGTCCGAAGCTCTTGAAAAATTCAGAGAGTATAAGACTGAGGTTCAGAATCTATTAGGTAAAACTATTAAAACACTTCGATCAGATCGAGGAGGAGAGTACATGGATTTAAGATTTCAGGACTATATGATAGAACATGGAATAAGGTCTCAACTCTCAGCCCCTGGTATGCCTCAACAAAATGGTGTATCAGAAAGAAGAAATAGAACTCTATTAGACATGGTTCGGTCTATGATGAGTTTCGCTCAATTACCCGATCCATTTTGGGGATATGCAGTAAAGACTGCTACATACATTTTGAACATGGTTCCTACTAAGAGTGTTTCAGAAACACCTTATGAGTTATGGAAAGGGCGTAAAGGTAGTTTACGTCACTTCAGAATTTGGGGATGTCCAGCACATGTGTTGTTGCAAAATCCCAAGAAATTAGAACGTCGTTCAAAATTATGTCTATTCGTAGGATACCCCAAAGAGACGAAAGGTGGTTTGTTTTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTATAACTCAACCCGATCGTTACTTGGGTTTGGCAGAAACTCAAGTCATCATACCTGATGATGGCGTTGAGGATCCATTGACCTATAAACAGGCAATGAATGATGAGGATAGAGATCAGTGGATTAAAGCCATGAATCTTGAAATGGAGTCAATGTACTTCAATTCAGTCTGGGAACTTGTAAATCAACCGGATGGGGTAAAACCTATTGGTTGCAAATGGATCTATAAGAGGAAACGAGACCAAACCGGTAAGGTACAGACCTTTAAAGCACGACTAGTAGCAAAGGATTATACCCAAAGAGAGGGGGTGGACTATGAAGAAACCTTCTCTCCTGTTGCTATGCTTAAATCAATAAGAATACTCTTGTCTATTGCCACATTTTATGATTATGAAATTTGGCAAATGGATGTTAAGACAGCTTTTCTAAACGGCAATCTTGAAGAGAGTATCTATATGGCTCAACCAGAGGGGTTCATTGAACAGGATCACGAGCAAAGGGTTTGCAAGCTTAAAAGATCCATTTATGGGTTGAAGCAAGCATCTCGATCCTGGAATATAAAGTTTGATACTGCGATCAAATCTTATGGCTTTAAACAGAATGTTGACGAACCTTGTGTTTATAAAAGGATAGTCAACTCTACAGTAGCTTTCCTGGTGTTGTACGTTGACGATATCCTACTCATTGGAAATGATGTGGGAATTCTGACTGACATTAAGCATTGGCTGGCGACACAATTCCAAATGAAAGATTTGGGAGAGGCTCAGTTTGTTCTTGGAATCCAAATTGTTCGGAATCGCAAGAACAAAACACTAGCATTGTCTCAAGCATCGAACATCGACAAAATGTTGATTCGATATAAGATGCAGGACTCCAAGAAAGGATTATTACCTTTCAGGCATGGAGTTCATTTGTCGAAGGAACAAAGTCCTAAGACACCTCAAGAAGTTGAGGATATGAAACACATTCCCTATGCATCAGCGGTCGGTAGTCTGATGTATGCCATGCTTTGTACCCGACCCGACATATGCTATGTTGTGGGAATTGTCAGCAGATATCAGTCCAATCCGGGACGTGCTCATTGGACTGCCGTTAAGAATATCCTCAAGTATCTTAGGAGAACGAGGGACTATATGCTAATGTACGGTGCTAAGGATCTGATCCTTACAGGGTACACTGACTCAGATTTTCAGACGGATGTTGATTCGAGGAAATCGACATCAAGATCTGTCTTCACTCTGAACGGAGGAGCAATAATATGGAGAAGCATAAAGCAAGGTTGCATTGCTGATTCCACCATGGAGGCTGAGTATGTTGCTGCTTGTGAAGCAGCGAAAGAATCTGTATGGCTTAGGAAGTTCTTAACTGATTTGGAAGTCGTTCCAAATATGCATCTTCCCGTCACTCTTTATTGTGATAACAGTGGAGCAGTTGCAAATTCAAAAGAACCAAGAAGCCATAAGCGAGGAAAACATATTGAACGCAAATATCATCTCATAAGGGAGATTGTGCAACGAGGAGATGTGATCGTCACACAGATAGCTTCAGAGCACAACATTGCTGATCCATTTACAAAGCCCCTCACGGCTAAAGTGTTTGAAGGGCACCTAGTGAGTCTAGGACTACGAGTTATGTAA

mRNA sequence

ATGACAAACTCAATAGTACAATTACTCGCTTCTGAGAAATTAAACGGCGACAACTACACAACTTGGAAATCAAACCTAAACACAATACTGGTCATTGATGATTTAAAGTTTGTTTTAACTAAAGAGTGTCCTCCAAACCCAAACTCAAATGCAAACCGAACAGCTCGGGATGCATATGACAGATGGATAAAGGCAAATGACAAAGCCCGAGTGTACATTCTAGCCAGCATATCTGATGTTTTGGCTAAGAAACACGATGTTATGGGTACTGCTAAAGAGATTATGGAATCTCTAAAAGGGATGTTTGGACAACCGTACTTCTCCCTTAGACATGAAGCCATAAAATACATTTACAACTGCCGTATGAAAGAAGGAACCTCAGTTAGAGAACATGTCCTGGACATGATGGTCCATTTCAATGTGGCAGAAGAAAATGAAGCTGTCATTGATGAGAAGAGTCAAGTCAGTTTTATCATGATGTCTCTTCCGAAGAGCTTCTTCCAGTTCCGCACCAATGTGGTTATGAACAAAATAGAATATAACTTGACTGCTCTTCTCAATGAGCTACAGACTTATCAGTCCCTCTTAACAAACAAGGGACAAACAGGAGAAGCAAATGTTGCCATCTCCAAGAAATTACTACGAGGATCGTCCTCCAAAAATAAGTCTGGACCTTCAACTTCTAAAGGTGTTTTGATGAAGAAGAAGGGAAAGGGGAAAAATAAGATTCCTACTAACCGCAAGAACAAGGTTCAAAAAGCAGATAAAGGAAAATGTTTCCATTGCAACGAAAACGGGCACTGGAAGAGAAATTGCCCAAAATACCTTGTAGAGAAGAAAGCCGAAAAGACACAACAAGGTTATAGAACCAAAGAAACCTTAGAACTCGTGCATACAGATCTCTGTGGTCCAATGAATGTCAAAGCACGAGGAGGGTATGAATATTTCATCAGTTTTATTGATGATTATTCAAGGTATGGCTATCTTTACCTAATGCATCACAAGTCCGAAGCTCTTGAAAAATTCAGAGAGTATAAGACTGAGGTTCAGAATCTATTAGGTAAAACTATTAAAACACTTCGATCAGATCGAGGAGGAGAGTACATGGATTTAAGATTTCAGGACTATATGATAGAACATGGAATAAGGTCTCAACTCTCAGCCCCTGGTATGCCTCAACAAAATGGTGTATCAGAAAGAAGAAATAGAACTCTATTAGACATGGTTCGGTCTATGATGAGTTTCGCTCAATTACCCGATCCATTTTGGGGATATGCAGTAAAGACTGCTACATACATTTTGAACATGGTTCCTACTAAGAGTGTTTCAGAAACACCTTATGAGTTATGGAAAGGGCGTAAAGAAACTCAAGTCATCATACCTGATGATGGCGTTGAGGATCCATTGACCTATAAACAGGCAATGAATGATGAGGATAGAGATCAGTGGATTAAAGCCATGAATCTTGAAATGGAGTCAATGTACTTCAATTCAGTCTGGGAACTTGTAAATCAACCGGATGGGGTAAAACCTATTGGTTGCAAATGGATCTATAAGAGGAAACGAGACCAAACCGGTAAGGTACAGACCTTTAAAGCACGACTAGTAGCAAAGGATTATACCCAAAGAGAGGGGGTGGACTATGAAGAAACCTTCTCTCCTGTTGCTATGCTTAAATCAATAAGAATACTCTTGTCTATTGCCACATTTTATGATTATGAAATTTGGCAAATGGATGTTAAGACAGCTTTTCTAAACGGCAATCTTGAAGAGAGTATCTATATGGCTCAACCAGAGGGGTTCATTGAACAGGATCACGAGCAAAGGGTTTGCAAGCTTAAAAGATCCATTTATGGGTTGAAGCAAGCATCTCGATCCTGGAATATAAAGTTTGATACTGCGATCAAATCTTATGGCTTTAAACAGAATGTTGACGAACCTTGTGTTTATAAAAGGATAGTCAACTCTACAGTAGCTTTCCTGGTGTTGTACGTTGACGATATCCTACTCATTGGAAATGATGTGGGAATTCTGACTGACATTAAGCATTGGCTGGCGACACAATTCCAAATGAAAGATTTGGGAGAGGCTCAGTTTGTTCTTGGAATCCAAATTGTTCGGAATCGCAAGAACAAAACACTAGCATTGTCTCAAGCATCGAACATCGACAAAATGTTGATTCGATATAAGATGCAGGACTCCAAGAAAGGATTATTACCTTTCAGGCATGGAGTTCATTTGTCGAAGGAACAAAGTCCTAAGACACCTCAAGAAGTTGAGGATATGAAACACATTCCCTATGCATCAGCGGTCGGTAGTCTGATGTATGCCATGCTTTGTACCCGACCCGACATATGCTATGTTGTGGGAATTGTCAGCAGATATCAGTCCAATCCGGGACGTGCTCATTGGACTGCCGTTAAGAATATCCTCAAGTATCTTAGGAGAACGAGGGACTATATGCTAATGTACGGTGCTAAGGATCTGATCCTTACAGGGTACACTGACTCAGATTTTCAGACGGATGTTGATTCGAGGAAATCGACATCAAGATCTGTCTTCACTCTGAACGGAGGAGCAATAATATGGAGAAGCATAAAGCAAGGTTGCATTGCTGATTCCACCATGGAGGCTGAGTATGTTGCTGCTTGTGAAGCAGCGAAAGAATCTGTATGGCTTAGGAAGTTCTTAACTGATTTGGAAGTCGTTCCAAATATGCATCTTCCCGTCACTCTTTATTGTGATAACAGTGGAGCAGTTGCAAATTCAAAAGAACCAAGAAGCCATAAGCGAGGAAAACATATTGAACGCAAATATCATCTCATAAGGGAGATTGTGCAACGAGGAGATGTGATCGTCACACAGATAGCTTCAGAGCACAACATTGCTGATCCATTTACAAAGCCCCTCACGGCTAAAGTGTTTGAAGGGCACCTAGTGAGTCTAGGACTACGAGTTATGTAA

Coding sequence (CDS)

ATGACAAACTCAATAGTACAATTACTCGCTTCTGAGAAATTAAACGGCGACAACTACACAACTTGGAAATCAAACCTAAACACAATACTGGTCATTGATGATTTAAAGTTTGTTTTAACTAAAGAGTGTCCTCCAAACCCAAACTCAAATGCAAACCGAACAGCTCGGGATGCATATGACAGATGGATAAAGGCAAATGACAAAGCCCGAGTGTACATTCTAGCCAGCATATCTGATGTTTTGGCTAAGAAACACGATGTTATGGGTACTGCTAAAGAGATTATGGAATCTCTAAAAGGGATGTTTGGACAACCGTACTTCTCCCTTAGACATGAAGCCATAAAATACATTTACAACTGCCGTATGAAAGAAGGAACCTCAGTTAGAGAACATGTCCTGGACATGATGGTCCATTTCAATGTGGCAGAAGAAAATGAAGCTGTCATTGATGAGAAGAGTCAAGTCAGTTTTATCATGATGTCTCTTCCGAAGAGCTTCTTCCAGTTCCGCACCAATGTGGTTATGAACAAAATAGAATATAACTTGACTGCTCTTCTCAATGAGCTACAGACTTATCAGTCCCTCTTAACAAACAAGGGACAAACAGGAGAAGCAAATGTTGCCATCTCCAAGAAATTACTACGAGGATCGTCCTCCAAAAATAAGTCTGGACCTTCAACTTCTAAAGGTGTTTTGATGAAGAAGAAGGGAAAGGGGAAAAATAAGATTCCTACTAACCGCAAGAACAAGGTTCAAAAAGCAGATAAAGGAAAATGTTTCCATTGCAACGAAAACGGGCACTGGAAGAGAAATTGCCCAAAATACCTTGTAGAGAAGAAAGCCGAAAAGACACAACAAGGTTATAGAACCAAAGAAACCTTAGAACTCGTGCATACAGATCTCTGTGGTCCAATGAATGTCAAAGCACGAGGAGGGTATGAATATTTCATCAGTTTTATTGATGATTATTCAAGGTATGGCTATCTTTACCTAATGCATCACAAGTCCGAAGCTCTTGAAAAATTCAGAGAGTATAAGACTGAGGTTCAGAATCTATTAGGTAAAACTATTAAAACACTTCGATCAGATCGAGGAGGAGAGTACATGGATTTAAGATTTCAGGACTATATGATAGAACATGGAATAAGGTCTCAACTCTCAGCCCCTGGTATGCCTCAACAAAATGGTGTATCAGAAAGAAGAAATAGAACTCTATTAGACATGGTTCGGTCTATGATGAGTTTCGCTCAATTACCCGATCCATTTTGGGGATATGCAGTAAAGACTGCTACATACATTTTGAACATGGTTCCTACTAAGAGTGTTTCAGAAACACCTTATGAGTTATGGAAAGGGCGTAAAGAAACTCAAGTCATCATACCTGATGATGGCGTTGAGGATCCATTGACCTATAAACAGGCAATGAATGATGAGGATAGAGATCAGTGGATTAAAGCCATGAATCTTGAAATGGAGTCAATGTACTTCAATTCAGTCTGGGAACTTGTAAATCAACCGGATGGGGTAAAACCTATTGGTTGCAAATGGATCTATAAGAGGAAACGAGACCAAACCGGTAAGGTACAGACCTTTAAAGCACGACTAGTAGCAAAGGATTATACCCAAAGAGAGGGGGTGGACTATGAAGAAACCTTCTCTCCTGTTGCTATGCTTAAATCAATAAGAATACTCTTGTCTATTGCCACATTTTATGATTATGAAATTTGGCAAATGGATGTTAAGACAGCTTTTCTAAACGGCAATCTTGAAGAGAGTATCTATATGGCTCAACCAGAGGGGTTCATTGAACAGGATCACGAGCAAAGGGTTTGCAAGCTTAAAAGATCCATTTATGGGTTGAAGCAAGCATCTCGATCCTGGAATATAAAGTTTGATACTGCGATCAAATCTTATGGCTTTAAACAGAATGTTGACGAACCTTGTGTTTATAAAAGGATAGTCAACTCTACAGTAGCTTTCCTGGTGTTGTACGTTGACGATATCCTACTCATTGGAAATGATGTGGGAATTCTGACTGACATTAAGCATTGGCTGGCGACACAATTCCAAATGAAAGATTTGGGAGAGGCTCAGTTTGTTCTTGGAATCCAAATTGTTCGGAATCGCAAGAACAAAACACTAGCATTGTCTCAAGCATCGAACATCGACAAAATGTTGATTCGATATAAGATGCAGGACTCCAAGAAAGGATTATTACCTTTCAGGCATGGAGTTCATTTGTCGAAGGAACAAAGTCCTAAGACACCTCAAGAAGTTGAGGATATGAAACACATTCCCTATGCATCAGCGGTCGGTAGTCTGATGTATGCCATGCTTTGTACCCGACCCGACATATGCTATGTTGTGGGAATTGTCAGCAGATATCAGTCCAATCCGGGACGTGCTCATTGGACTGCCGTTAAGAATATCCTCAAGTATCTTAGGAGAACGAGGGACTATATGCTAATGTACGGTGCTAAGGATCTGATCCTTACAGGGTACACTGACTCAGATTTTCAGACGGATGTTGATTCGAGGAAATCGACATCAAGATCTGTCTTCACTCTGAACGGAGGAGCAATAATATGGAGAAGCATAAAGCAAGGTTGCATTGCTGATTCCACCATGGAGGCTGAGTATGTTGCTGCTTGTGAAGCAGCGAAAGAATCTGTATGGCTTAGGAAGTTCTTAACTGATTTGGAAGTCGTTCCAAATATGCATCTTCCCGTCACTCTTTATTGTGATAACAGTGGAGCAGTTGCAAATTCAAAAGAACCAAGAAGCCATAAGCGAGGAAAACATATTGAACGCAAATATCATCTCATAAGGGAGATTGTGCAACGAGGAGATGTGATCGTCACACAGATAGCTTCAGAGCACAACATTGCTGATCCATTTACAAAGCCCCTCACGGCTAAAGTGTTTGAAGGGCACCTAGTGAGTCTAGGACTACGAGTTATGTAA

Protein sequence

MTNSIVQLLASEKLNGDNYTTWKSNLNTILVIDDLKFVLTKECPPNPNSNANRTARDAYDRWIKANDKARVYILASISDVLAKKHDVMGTAKEIMESLKGMFGQPYFSLRHEAIKYIYNCRMKEGTSVREHVLDMMVHFNVAEENEAVIDEKSQVSFIMMSLPKSFFQFRTNVVMNKIEYNLTALLNELQTYQSLLTNKGQTGEANVAISKKLLRGSSSKNKSGPSTSKGVLMKKKGKGKNKIPTNRKNKVQKADKGKCFHCNENGHWKRNCPKYLVEKKAEKTQQGYRTKETLELVHTDLCGPMNVKARGGYEYFISFIDDYSRYGYLYLMHHKSEALEKFREYKTEVQNLLGKTIKTLRSDRGGEYMDLRFQDYMIEHGIRSQLSAPGMPQQNGVSERRNRTLLDMVRSMMSFAQLPDPFWGYAVKTATYILNMVPTKSVSETPYELWKGRKETQVIIPDDGVEDPLTYKQAMNDEDRDQWIKAMNLEMESMYFNSVWELVNQPDGVKPIGCKWIYKRKRDQTGKVQTFKARLVAKDYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMAQPEGFIEQDHEQRVCKLKRSIYGLKQASRSWNIKFDTAIKSYGFKQNVDEPCVYKRIVNSTVAFLVLYVDDILLIGNDVGILTDIKHWLATQFQMKDLGEAQFVLGIQIVRNRKNKTLALSQASNIDKMLIRYKMQDSKKGLLPFRHGVHLSKEQSPKTPQEVEDMKHIPYASAVGSLMYAMLCTRPDICYVVGIVSRYQSNPGRAHWTAVKNILKYLRRTRDYMLMYGAKDLILTGYTDSDFQTDVDSRKSTSRSVFTLNGGAIIWRSIKQGCIADSTMEAEYVAACEAAKESVWLRKFLTDLEVVPNMHLPVTLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTQIASEHNIADPFTKPLTAKVFEGHLVSLGLRVM
Homology
BLAST of CmoCh20G011630 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 565.8 bits (1457), Expect = 9.3e-160
Identity = 322/845 (38.11%), Postives = 464/845 (54.91%), Query Frame = 0

Query: 289  RTKETLELVHTDLCGPMNVKARGGYEYFISFIDDYSRYGYLYLMHHKSEALEKFREYKTE 348
            R    L+LV++D+CGPM +++ GG +YF++FIDD SR  ++Y++  K +  + F+++   
Sbjct: 476  RKLNILDLVYSDVCGPMEIESMGGNKYFVTFIDDASRKLWVYILKTKDQVFQVFQKFHAL 535

Query: 349  VQNLLGKTIKTLRSDRGGEYMDLRFQDYMIEHGIRSQLSAPGMPQQNGVSERRNRTLLDM 408
            V+   G+ +K LRSD GGEY    F++Y   HGIR + + PG PQ NGV+ER NRT+++ 
Sbjct: 536  VERETGRKLKRLRSDNGGEYTSREFEEYCSSHGIRHEKTVPGTPQHNGVAERMNRTIVEK 595

Query: 409  VRSMMSFAQLPDPFWGYAVKTATYILNMVPT--------------KSVS----------- 468
            VRSM+  A+LP  FWG AV+TA Y++N  P+              K VS           
Sbjct: 596  VRSMLRMAKLPKSFWGEAVQTACYLINRSPSVPLAFEIPERVWTNKEVSYSHLKVFGCRA 655

Query: 469  ---------------------------ETPYELWKGRK------------ETQV------ 528
                                       E  Y LW   K            E++V      
Sbjct: 656  FAHVPKEQRTKLDDKSIPCIFIGYGDEEFGYRLWDPVKKKVIRSRDVVFRESEVRTAADM 715

Query: 529  -------IIP---------------------------------------DDGVE------ 588
                   IIP                                       D+GVE      
Sbjct: 716  SEKVKNGIIPNFVTIPSTSNNPTSAESTTDEVSEQGEQPGEVIEQGEQLDEGVEEVEHPT 775

Query: 589  ----------------------------------DPLTYKQAMNDEDRDQWIKAMNLEME 648
                                              +P + K+ ++  +++Q +KAM  EME
Sbjct: 776  QGEEQHQPLRRSERPRVESRRYPSTEYVLISDDREPESLKEVLSHPEKNQLMKAMQEEME 835

Query: 649  SMYFNSVWELVNQPDGVKPIGCKWIYKRKRDQTGKVQTFKARLVAKDYTQREGVDYEETF 708
            S+  N  ++LV  P G +P+ CKW++K K+D   K+  +KARLV K + Q++G+D++E F
Sbjct: 836  SLQKNGTYKLVELPKGKRPLKCKWVFKLKKDGDCKLVRYKARLVVKGFEQKKGIDFDEIF 895

Query: 709  SPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMAQPEGFIEQDHEQRVCK 768
            SPV  + SIR +LS+A   D E+ Q+DVKTAFL+G+LEE IYM QPEGF     +  VCK
Sbjct: 896  SPVVKMTSIRTILSLAASLDLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVAGKKHMVCK 955

Query: 769  LKRSIYGLKQASRSWNIKFDTAIKSYGFKQNVDEPCVY-KRIVNSTVAFLVLYVDDILLI 828
            L +S+YGLKQA R W +KFD+ +KS  + +   +PCVY KR   +    L+LYVDD+L++
Sbjct: 956  LNKSLYGLKQAPRQWYMKFDSFMKSQTYLKTYSDPCVYFKRFSENNFIILLLYVDDMLIV 1015

Query: 829  GNDVGILTDIKHWLATQFQMKDLGEAQFVLGIQIVRNRKNKTLALSQASNIDKMLIRYKM 888
            G D G++  +K  L+  F MKDLG AQ +LG++IVR R ++ L LSQ   I+++L R+ M
Sbjct: 1016 GKDKGLIAKLKGDLSKSFDMKDLGPAQQILGMKIVRERTSRKLWLSQEKYIERVLERFNM 1075

Query: 889  QDSKKGLLPFRHGVHLSKEQSPKTPQEVEDMKHIPYASAVGSLMYAMLCTRPDICYVVGI 948
            +++K    P    + LSK+  P T +E  +M  +PY+SAVGSLMYAM+CTRPDI + VG+
Sbjct: 1076 KNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVPYSSAVGSLMYAMVCTRPDIAHAVGV 1135

Query: 949  VSRYQSNPGRAHWTAVKNILKYLRRTRDYMLMYGAKDLILTGYTDSDFQTDVDSRKSTSR 977
            VSR+  NPG+ HW AVK IL+YLR T    L +G  D IL GYTD+D   D+D+RKS++ 
Sbjct: 1136 VSRFLENPGKEHWEAVKWILRYLRGTTGDCLCFGGSDPILKGYTDADMAGDIDNRKSSTG 1195

BLAST of CmoCh20G011630 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 367.1 bits (941), Expect = 6.3e-100
Identity = 252/937 (26.89%), Postives = 409/937 (43.65%), Query Frame = 0

Query: 291  KETLELVHTDLCGPMNVKARGGYEYFISFIDDYSRYGYLYLMHHKSEALEKFREYKTEVQ 350
            K  L +VH+D+CGP+         YF+ F+D ++ Y   YL+ +KS+    F+++  + +
Sbjct: 478  KRPLFVVHSDVCGPITPVTLDDKNYFVIFVDQFTHYCVTYLIKYKSDVFSMFQDFVAKSE 537

Query: 351  NLLGKTIKTLRSDRGGEYMDLRFQDYMIEHGIRSQLSAPGMPQQNGVSERRNRTLLDMVR 410
                  +  L  D G EY+    + + ++ GI   L+ P  PQ NGVSER  RT+ +  R
Sbjct: 538  AHFNLKVVYLYIDNGREYLSNEMRQFCVKKGISYHLTVPHTPQLNGVSERMIRTITEKAR 597

Query: 411  SMMSFAQLPDPFWGYAVKTATYILNMVPTKSV---SETPYELWKGRK------------- 470
            +M+S A+L   FWG AV TATY++N +P++++   S+TPYE+W  +K             
Sbjct: 598  TMVSGAKLDKSFWGEAVLTATYLINRIPSRALVDSSKTPYEMWHNKKPYLKHLRVFGATV 657

Query: 471  -----------------------------------------------ETQVI-------- 530
                                                           ET ++        
Sbjct: 658  YVHIKNKQGKFDDKSFKSIFVGYEPNGFKLWDAVNEKFIVARDVVVDETNMVNSRAVKFE 717

Query: 531  --------------------------------------------------IPDD------ 590
                                                               P+D      
Sbjct: 718  TVFLKDSKESENKNFPNDSRKIIQTEFPNESKECDNIQFLKDSKESENKNFPNDSRKIIQ 777

Query: 591  ------------------------------------------------------------ 650
                                                                        
Sbjct: 778  TEFPNESKECDNIQFLKDSKESNKYFLNESKKRKRDDHLNESKGSGNPNESRESETAEHL 837

Query: 651  ---GVEDP---------------------LTYKQAMND---------------------- 710
               G+++P                     ++Y +  N                       
Sbjct: 838  KEIGIDNPTKNDGIEIINRRSERLKTKPQISYNEEDNSLNKVVLNAHTIFNDVPNSFDEI 897

Query: 711  ---EDRDQWIKAMNLEMESMYFNSVWELVNQPDGVKPIGCKWIYKRKRDQTGKVQTFKAR 770
               +D+  W +A+N E+ +   N+ W +  +P+    +  +W++  K ++ G    +KAR
Sbjct: 898  QYRDDKSSWEEAINTELNAHKINNTWTITKRPENKNIVDSRWVFSVKYNELGNPIRYKAR 957

Query: 771  LVAKDYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIY 830
            LVA+ +TQ+  +DYEETF+PVA + S R +LS+   Y+ ++ QMDVKTAFLNG L+E IY
Sbjct: 958  LVARGFTQKYQIDYEETFAPVARISSFRFILSLVIQYNLKVHQMDVKTAFLNGTLKEEIY 1017

Query: 831  MAQPEGFIEQDHEQRVCKLKRSIYGLKQASRSWNIKFDTAIKSYGFKQNVDEPCVY---K 890
            M  P+G     +   VCKL ++IYGLKQA+R W   F+ A+K   F  +  + C+Y   K
Sbjct: 1018 MRLPQGI--SCNSDNVCKLNKAIYGLKQAARCWFEVFEQALKECEFVNSSVDRCIYILDK 1077

Query: 891  RIVNSTVAFLVLYVDDILLIGNDVGILTDIKHWLATQFQMKDLGEAQFVLGIQIVRNRKN 950
              +N  + +++LYVDD+++   D+  + + K +L  +F+M DL E +  +GI+I    + 
Sbjct: 1078 GNINENI-YVLLYVDDVVIATGDMTRMNNFKRYLMEKFRMTDLNEIKHFIGIRI--EMQE 1137

Query: 951  KTLALSQASNIDKMLIRYKMQDSKKGLLPFRHGVHLSKEQSPKTPQEVEDMKHIPYASAV 985
              + LSQ++ + K+L ++ M++      P    ++     S       ++  + P  S +
Sbjct: 1138 DKIYLSQSAYVKKILSKFNMENCNAVSTPLPSKINYELLNS-------DEDCNTPCRSLI 1197

BLAST of CmoCh20G011630 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 1.4e-86
Identity = 187/520 (35.96%), Postives = 277/520 (53.27%), Query Frame = 0

Query: 467  DPLTYKQAMNDEDRDQWIKAMNLEMESMYFNSVWELV-NQPDGVKPIGCKWIYKRKRDQT 526
            +P T  QAM D   D+W +AM  E+ +   N  W+LV   P  V  +GC+WI+ +K +  
Sbjct: 938  EPRTAIQAMKD---DRWRQAMGSEINAQIGNHTWDLVPPPPPSVTIVGCRWIFTKKFNSD 997

Query: 527  GKVQTFKARLVAKDYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFL 586
            G +  +KARLVAK Y QR G+DY ETFSPV    SIRI+L +A    + I Q+DV  AFL
Sbjct: 998  GSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFL 1057

Query: 587  NGNLEESIYMAQPEGFIEQDHEQRVCKLKRSIYGLKQASRSWNIKFDTAIKSYGFKQNVD 646
             G L + +YM+QP GF+++D    VC+L+++IYGLKQA R+W ++  T + + GF  ++ 
Sbjct: 1058 QGTLTDEVYMSQPPGFVDKDRPDYVCRLRKAIYGLKQAPRAWYVELRTYLLTVGFVNSIS 1117

Query: 647  EPCVYKRIVNSTVAFLVLYVDDILLIGNDVGILTDIKHWLATQFQMKDLGEAQFVLGIQI 706
            +  ++      ++ ++++YVDDIL+ GND  +L      L+ +F +K+  +  + LGI+ 
Sbjct: 1118 DTSLFVLQRGRSIIYMLVYVDDILITGNDTVLLKHTLDALSQRFSVKEHEDLHYFLGIE- 1177

Query: 707  VRNRKNKTLALSQASNIDKMLIRYKMQDSKKGLLPFRHGVHLSKEQSPKTPQEVEDMKHI 766
               R  + L LSQ      +L R  M  +K    P      L+     K P   E     
Sbjct: 1178 -AKRVPQGLHLSQRRYTLDLLARTNMLTAKPVATPMATSPKLTLHSGTKLPDPTE----- 1237

Query: 767  PYASAVGSLMYAMLCTRPDICYVVGIVSRYQSNPGRAHWTAVKNILKYLRRTRDY-MLMY 826
             Y   VGSL Y +  TRPD+ Y V  +S+Y   P   HW A+K +L+YL  T D+ + + 
Sbjct: 1238 -YRGIVGSLQY-LAFTRPDLSYAVNRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLK 1297

Query: 827  GAKDLILTGYTDSDFQTDVDSRKSTSRSVFTLNGGAIIWRSIKQGCIADSTMEAEYVAAC 886
                L L  Y+D+D+  D D   ST+  +  L    I W S KQ  +  S+ EAEY +  
Sbjct: 1298 KGNTLSLHAYSDADWAGDTDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVA 1357

Query: 887  EAAKESVWLRKFLTDLEVVPNMHLPVTLYCDNSGAVANSKEPRSHKRGKHIERKYHLIRE 946
              + E  W+   LT+L +   +  P  +YCDN GA      P  H R KHI   YH IR 
Sbjct: 1358 NTSSELQWICSLLTELGI--QLSHPPVIYCDNVGATYLCANPVFHSRMKHIALDYHFIRN 1417

Query: 947  IVQRGDVIVTQIASEHNIADPFTKPLTAKVFEGHLVSLGL 985
             VQ G + V  +++   +AD  TKPL+   F+     +G+
Sbjct: 1418 QVQSGALRVVHVSTHDQLADTLTKPLSRVAFQNFSRKIGV 1443


HSP 2 Score: 109.0 bits (271), Expect = 3.1e-22
Identity = 54/160 (33.75%), Postives = 98/160 (61.25%), Query Frame = 0

Query: 290 TKETLELVHTDLCGPMNVKARGGYEYFISFIDDYSRYGYLYLMHHKSEALEKFREYKTEV 349
           + + LE +++D+     + +   Y Y++ F+D ++RY +LY +  KS+  + F  +K+ V
Sbjct: 499 SSKPLEYIYSDVWS-SPILSIDNYRYYVIFVDHFTRYTWLYPLKQKSQVKDTFIIFKSLV 558

Query: 350 QNLLGKTIKTLRSDRGGEYMDLRFQDYMIEHGIRSQLSAPGMPQQNGVSERRNRTLLDMV 409
           +N     I TL SD GGE++ LR  DY+ +HGI    S P  P+ NG+SER++R +++M 
Sbjct: 559 ENRFQTRIGTLYSDNGGEFVVLR--DYLSQHGISHFTSPPHTPEHNGLSERKHRHIVEMG 618

Query: 410 RSMMSFAQLPDPFWGYAVKTATYILNMVPTKSVS-ETPYE 449
            +++S A +P  +W YA   A Y++N +PT  +  ++P++
Sbjct: 619 LTLLSHASVPKTYWPYAFSVAVYLINRLPTPLLQLQSPFQ 655

BLAST of CmoCh20G011630 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 2.2e-84
Identity = 189/520 (36.35%), Postives = 274/520 (52.69%), Query Frame = 0

Query: 467  DPLTYKQAMNDEDRDQWIKAMNLEMESMYFNSVWELVNQPDG-VKPIGCKWIYKRKRDQT 526
            +P T  QA+ DE   +W  AM  E+ +   N  W+LV  P   V  +GC+WI+ +K +  
Sbjct: 955  EPRTAIQALKDE---RWRNAMGSEINAQIGNHTWDLVPPPPSHVTIVGCRWIFTKKYNSD 1014

Query: 527  GKVQTFKARLVAKDYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFL 586
            G +  +KARLVAK Y QR G+DY ETFSPV    SIRI+L +A    + I Q+DV  AFL
Sbjct: 1015 GSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFL 1074

Query: 587  NGNLEESIYMAQPEGFIEQDHEQRVCKLKRSIYGLKQASRSWNIKFDTAIKSYGFKQNVD 646
             G L + +YM+QP GFI++D    VCKL++++YGLKQA R+W ++    + + GF  +V 
Sbjct: 1075 QGTLTDDVYMSQPPGFIDKDRPNYVCKLRKALYGLKQAPRAWYVELRNYLLTIGFVNSVS 1134

Query: 647  EPCVYKRIVNSTVAFLVLYVDDILLIGNDVGILTDIKHWLATQFQMKDLGEAQFVLGIQI 706
            +  ++      ++ ++++YVDDIL+ GND  +L +    L+ +F +KD  E  + LGI+ 
Sbjct: 1135 DTSLFVLQRGKSIVYMLVYVDDILITGNDPTLLHNTLDNLSQRFSVKDHEELHYFLGIE- 1194

Query: 707  VRNRKNKTLALSQASNIDKMLIRYKMQDSKKGLLPFRHGVHLSKEQSPKTPQEVEDMKHI 766
               R    L LSQ   I  +L R  M  +K    P      LS     K     E     
Sbjct: 1195 -AKRVPTGLHLSQRRYILDLLARTNMITAKPVTTPMAPSPKLSLYSGTKLTDPTE----- 1254

Query: 767  PYASAVGSLMYAMLCTRPDICYVVGIVSRYQSNPGRAHWTAVKNILKYLRRTRDY-MLMY 826
             Y   VGSL Y +  TRPDI Y V  +S++   P   H  A+K IL+YL  T ++ + + 
Sbjct: 1255 -YRGIVGSLQY-LAFTRPDISYAVNRLSQFMHMPTEEHLQALKRILRYLAGTPNHGIFLK 1314

Query: 827  GAKDLILTGYTDSDFQTDVDSRKSTSRSVFTLNGGAIIWRSIKQGCIADSTMEAEYVAAC 886
                L L  Y+D+D+  D D   ST+  +  L    I W S KQ  +  S+ EAEY +  
Sbjct: 1315 KGNTLSLHAYSDADWAGDKDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVA 1374

Query: 887  EAAKESVWLRKFLTDLEVVPNMHLPVTLYCDNSGAVANSKEPRSHKRGKHIERKYHLIRE 946
              + E  W+   LT+L +   +  P  +YCDN GA      P  H R KHI   YH IR 
Sbjct: 1375 NTSSEMQWICSLLTELGI--RLTRPPVIYCDNVGATYLCANPVFHSRMKHIAIDYHFIRN 1434

Query: 947  IVQRGDVIVTQIASEHNIADPFTKPLTAKVFEGHLVSLGL 985
             VQ G + V  +++   +AD  TKPL+   F+     +G+
Sbjct: 1435 QVQSGALRVVHVSTHDQLADTLTKPLSRTAFQNFASKIGV 1460


HSP 2 Score: 105.9 bits (263), Expect = 2.6e-21
Identity = 56/181 (30.94%), Postives = 100/181 (55.25%), Query Frame = 0

Query: 271 NCPKYLVEK--KAEKTQQGYRTKETLELVHTDLCGPMNVKARGGYEYFISFIDDYSRYGY 330
           +C   L+ K  K   +Q    +   LE +++D+     + +   Y Y++ F+D ++RY +
Sbjct: 499 SCSDCLINKSNKVPFSQSTINSTRPLEYIYSDVWS-SPILSHDNYRYYVIFVDHFTRYTW 558

Query: 331 LYLMHHKSEALEKFREYKTEVQNLLGKTIKTLRSDRGGEYMDLRFQDYMIEHGIRSQLSA 390
           LY +  KS+  E F  +K  ++N     I T  SD GGE++ L   +Y  +HGI    S 
Sbjct: 559 LYPLKQKSQVKETFITFKNLLENRFQTRIGTFYSDNGGEFVAL--WEYFSQHGISHLTSP 618

Query: 391 PGMPQQNGVSERRNRTLLDMVRSMMSFAQLPDPFWGYAVKTATYILNMVPTKSVS-ETPY 449
           P  P+ NG+SER++R +++   +++S A +P  +W YA   A Y++N +PT  +  E+P+
Sbjct: 619 PHTPEHNGLSERKHRHIVETGLTLLSHASIPKTYWPYAFAVAVYLINRLPTPLLQLESPF 676

BLAST of CmoCh20G011630 vs. ExPASy Swiss-Prot
Match: P25600 (Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY5A PE=5 SV=2)

HSP 1 Score: 152.9 bits (385), Expect = 1.9e-35
Identity = 104/314 (33.12%), Postives = 149/314 (47.45%), Query Frame = 0

Query: 578 MDVKTAFLNGNLEESIYMAQPEGFIEQDHEQRVCKLKRSIYGLKQASRSWNIKFDTAIKS 637
           MDV TAFLN  ++E IY+ QP GF+ + +   V +L   +YGLKQA   WN   +  +K 
Sbjct: 1   MDVDTAFLNSTMDEPIYVKQPPGFVNERNPDYVWELYGGMYGLKQAPLLWNEHINNTLKK 60

Query: 638 YGFKQNVDEPCVYKRIVNSTVAFLVLYVDDILLIGNDVGILTDIKHWLATQFQMKDLGEA 697
            GF ++  E  +Y R  +    ++ +YVDD+L+      I   +K  L   + MKDLG+ 
Sbjct: 61  IGFCRHEGEHGLYFRSTSDGPIYIAVYVDDLLVAAPSPKIYDRVKQELTKLYSMKDLGKV 120

Query: 698 QFVLGIQIVRNRKNKTLALSQASNIDKMLIRYKMQDSKKGLLPFRHGVHLSKEQSPKTPQ 757
              LG+ I     N  + LS    I K     ++   K    P  +   L +  SP    
Sbjct: 121 DKFLGLNI-HQSSNGDITLSLQDYIAKAASESEINTFKLTQTPLCNSKPLFETTSP---- 180

Query: 758 EVEDMKHIPYASAVGSLMYAMLCTRPDICYVVGIVSRYQSNPGRAHWTAVKNILKYLRRT 817
            ++D+   PY S VG L++     RPDI Y V ++SR+   P   H  + + +L+YL  T
Sbjct: 181 HLKDI--TPYQSIVGQLLFCANTGRPDISYPVSLLSRFLREPRAIHLESARRVLRYLYTT 240

Query: 818 RDYMLMY-GAKDLILTGYTDSDFQTDVDSRKSTSRSVFTLNGGAIIWRSIK-QGCIADST 877
           R   L Y     L LT Y D+      D   ST   V  L G  + W S K +G I   +
Sbjct: 241 RSMCLKYRSGSQLALTVYCDASHGAIHDLPHSTGGYVTLLAGAPVTWSSKKLKGVIPVPS 300

Query: 878 MEAEYVAACEAAKE 890
            EAEY+ A E   E
Sbjct: 301 TEAEYITASETVME 307

BLAST of CmoCh20G011630 vs. ExPASy TrEMBL
Match: A0A5A7SNP8 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19G002160 PE=4 SV=1)

HSP 1 Score: 1473.8 bits (3814), Expect = 0.0e+00
Identity = 761/1136 (66.99%), Postives = 862/1136 (75.88%), Query Frame = 0

Query: 1    MTNSIVQLLASEKLNGDNYTTWKSNLNTILVIDDLKFVLTKECPPNPNSNANRTARDAYD 60
            ++++ + +LA++KLNG+NY +WK+ +N +L+IDDL+FVL ++CP  P +NA RT R+ Y+
Sbjct: 63   LSSATLNMLAADKLNGNNYASWKNTINIVLIIDDLRFVLVEDCPQVPAANATRTVREPYE 122

Query: 61   RWIKANDKARVYILASISDVLAKKHDVMGTAKEIMESLKGMFGQPYFSLRHEAIKYIYNC 120
            RW KAN+KAR YILAS+S+VLAKKH+ M TA+EIM+SL+ MFGQ  + ++H+A+KYIYN 
Sbjct: 123  RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 182

Query: 121  RMKEGTSVREHVLDMMVHFNVAEENEAVIDEKSQVSFIMMSLPKSFFQFRTNVVMNKIEY 180
            RM EG SVREHVL+MMVHFNVA  NEAVIDE SQVSFI+ SLP+SF QFR+N VMNKI Y
Sbjct: 183  RMNEGASVREHVLNMMVHFNVAVMNEAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 242

Query: 181  NLTALLNELQTYQSLLTNKGQTGEANVAIS-KKLLRGSSSKNKSGPSTSKGVLMKKK--G 240
             LT LLNELQT++SL+  KGQ GEANVA S +K  RGS+S  KS PS+S     KKK  G
Sbjct: 243  TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 302

Query: 241  KG-KNKIPTNRKNKVQKADKGKCFHCNENGHWKRNCPKYLVEKKAEK---------TQQG 300
            +G K  +   +  K  KA KG CF CN+ GHWKRNCPKYL +KK  K         T +G
Sbjct: 303  QGNKANLAAAKTTKKAKAAKGICFLCNQEGHWKRNCPKYLAKKKKAKQGKMTKRPFTGKG 362

Query: 301  YRTKETLELVHTDLCGPMNVKARGGYEYFISFIDDYSRYGYLYLMHHKSEALEKFREYKT 360
            +R KE LELVH+DLCGPMNVKARGG+EYFI+F DDYSRYGY+YLM HKSEALEKF+EYK 
Sbjct: 363  HRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKA 422

Query: 361  EVQNLLGKTIKTLRSDRGGEYMDLRFQDYMIEHGIRSQLSAPGMPQQNGVSERRNRTLLD 420
            EV+N L KTIKT RSDRGGEYMDL+FQ+Y++E GI SQLSAP  PQQNGVSERRNRTLLD
Sbjct: 423  EVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPDTPQQNGVSERRNRTLLD 482

Query: 421  MVRSMMSFAQLPDPFWGYAVKTATYILNMVPTKSVSETPYELWKGRK------------- 480
            MVRSMMS+A LP+ FWGYAV+TA YILN VP+KSVSETP +LW G K             
Sbjct: 483  MVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGHKGSLRHFRIWGCPA 542

Query: 481  ------------------------------------------------------------ 540
                                                                        
Sbjct: 543  HVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRS 602

Query: 541  ------------------------------------------------------------ 600
                                                                        
Sbjct: 603  KIVLNELSKETTEPSTRVVEEPSALIRVVHVRSSTRTHQPQSLREPRRSGRVTNLPIRYM 662

Query: 601  ---ETQVIIPDDGVEDPLTYKQAMNDEDRDQWIKAMNLEMESMYFNSVWELVNQPDGVKP 660
               ET  +I D  +EDPLT+K+AM D D+D+WIKAMNLE+ESMYFNSVW+LV+QPDGVKP
Sbjct: 663  SLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKP 722

Query: 661  IGCKWIYKRKRDQTGKVQTFKARLVAKDYTQREGVDYEETFSPVAMLKSIRILLSIATFY 720
            IGCKWIYKRKR   GKVQTFKARLVAK YTQ EGVDYEETFSPVAMLKSIRILLSIA ++
Sbjct: 723  IGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYF 782

Query: 721  DYEIWQMDVKTAFLNGNLEESIYMAQPEGFIEQDHEQRVCKLKRSIYGLKQASRSWNIKF 780
            DYEIWQMDVKTAFLNGNLEE+IYM QPEGFI    EQ++CKL RSIYGLKQASRSWNI+F
Sbjct: 783  DYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRF 842

Query: 781  DTAIKSYGFKQNVDEPCVYKRIVNSTVAFLVLYVDDILLIGNDVGILTDIKHWLATQFQM 840
            DTAIKSYGF Q VDEPCVYKRI+N +VAFLVLYVDDILLIGND+G+LTDIK WLATQFQM
Sbjct: 843  DTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDIKQWLATQFQM 902

Query: 841  KDLGEAQFVLGIQIVRNRKNKTLALSQASNIDKMLIRYKMQDSKKGLLPFRHGVHLSKEQ 900
            KDLGEAQFVLGIQI R+RKNK LALSQAS IDK++++Y MQ+SK+GLLPFRHGV LSKEQ
Sbjct: 903  KDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQ 962

Query: 901  SPKTPQEVEDMKHIPYASAVGSLMYAMLCTRPDICYVVGIVSRYQSNPGRAHWTAVKNIL 960
             PKTPQ+VE+M+HIPYASAVGSLMYAMLCTRPDICY VGIVSRYQSNPG AHWTAVK IL
Sbjct: 963  CPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTIL 1022

Query: 961  KYLRRTRDYMLMYGAKDLILTGYTDSDFQTDVDSRKSTSRSVFTLNGGAIIWRSIKQGCI 988
            KYLRRTRDY L+YG+KDLILTGYTDSDFQTD DSRKSTS SVFTLNGGA++WRSIKQGCI
Sbjct: 1023 KYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCI 1082

BLAST of CmoCh20G011630 vs. ExPASy TrEMBL
Match: E2GK51 (Gag/pol protein (Fragment) OS=Bryonia dioica OX=3652 PE=4 SV=1)

HSP 1 Score: 1450.6 bits (3754), Expect = 0.0e+00
Identity = 788/1298 (60.71%), Postives = 869/1298 (66.95%), Query Frame = 0

Query: 1    MTNSIVQLLASEKLNGDNYTTWKSNLNTILVIDDLKFVLTKECPPNPNSNANRTARDAYD 60
            M  SIVQLLASEKLNGDNY+ WKSNLNTILV+DDL+FVLT+ECP  P  NANRT R+AYD
Sbjct: 1    MNTSIVQLLASEKLNGDNYSAWKSNLNTILVVDDLRFVLTEECPQAPALNANRTVREAYD 60

Query: 61   RWIKANDKARVYILASISDVLAKKHDVMGTAKEIMESLKGMFGQPYFSLRHEAIKYIYNC 120
            RW+KANDKARVYILAS++DVLAKKHD + TAK IM+SL+ MFGQP +SLRHEAIK+IY  
Sbjct: 61   RWVKANDKARVYILASMTDVLAKKHDSIATAKGIMDSLREMFGQPSWSLRHEAIKHIYTK 120

Query: 121  RMKEGTSVREHVLDMMVHFNVAEENEAVIDEKSQVSFIMMSLPKSFFQFRTNVVMNKIEY 180
            RMKEGTSVREHVLDMM+HFN+AE N   IDE +QVSFI+ SLPKSF  F+TN  +NKIE+
Sbjct: 121  RMKEGTSVREHVLDMMMHFNIAEVNGGPIDEANQVSFILQSLPKSFVPFQTNASLNKIEF 180

Query: 181  NLTALLNELQTYQSLLTNKGQTGEANVAISK-KLLRGSSSKNKSGPSTSKGVLMKKKGKG 240
            NLT LLNELQ +Q+L  +KG+  EANVA++K K +RGSSSKNK GPS ++   MKKKGKG
Sbjct: 181  NLTTLLNELQRFQNLTLSKGKEVEANVAVTKRKFIRGSSSKNKVGPSKAQ---MKKKGKG 240

Query: 241  KNKIPTNRKNKVQKADKGKCFHCNENGHWKRNCPKYLVEKKAEKTQQG------------ 300
              K P   K K + ADKGKCFHCN++GHWKRNCPKYL EKKAEK  QG            
Sbjct: 241  --KAPNTSKVK-KNADKGKCFHCNQDGHWKRNCPKYLAEKKAEKATQGKYDLLVVETCLV 300

Query: 301  ------------------------------------------------------------ 360
                                                                        
Sbjct: 301  ECDASTWILDSGATNHICFSFQETSSWKKLKEGEITLKVGTGEVVSAEAVGDLTLFFQDR 360

Query: 361  ------------------------------------------------------------ 420
                                                                        
Sbjct: 361  YLILKDVLYVPLMKRNLISIACILEHIYTISFEVNEVFILCKGIQICSAIRENNLYKLRP 420

Query: 421  -----------YRTKET------------------------------------------- 480
                       +RT ET                                           
Sbjct: 421  TRANVVLNTEMFRTLETQNKKQKVSSNAYLWHLRLGHINLNRIERLVKSGILNQLEDNSL 480

Query: 481  --------------------------LELVHTDLCGPMNVKARGGYEYFISFIDDYSRYG 540
                                      LELVH+DLCGPMNVKARGGYEYFISFIDD+SRYG
Sbjct: 481  PPCESCLEGKMTKRSFTGKGLRAKVPLELVHSDLCGPMNVKARGGYEYFISFIDDFSRYG 540

Query: 541  YLYLMHHKSEALEKFREYKTEVQNLLGKTIKTLRSDRGGEYMDLRFQDYMIEHGIRSQLS 600
            ++YL+HHKSE+ EKF+EYK EV+N +GKTIKTLRSDRGGEYMD +FQDY+IE GI+SQLS
Sbjct: 541  HVYLLHHKSESFEKFKEYKAEVENEIGKTIKTLRSDRGGEYMDSKFQDYLIEFGIQSQLS 600

Query: 601  APGMPQQNGVSERRNRTLLDMVRSMMSFAQLPDPFWGYAVKTATYILNMVPTKSVSETPY 660
            AP  PQQNGVSERRNRTLLDMVRSMMS+AQLPD FWGYA++TA +ILN VP+KSV ETPY
Sbjct: 601  APSTPQQNGVSERRNRTLLDMVRSMMSYAQLPDSFWGYALETAIHILNNVPSKSVLETPY 660

Query: 661  ELWKGRK----------------------------------------------------- 720
            ELWKGRK                                                     
Sbjct: 661  ELWKGRKSSLRYFRIWGCPAHVLVQNPKKLEPRSKLCLFVGYPKESRGGLFYHPQENKVF 720

Query: 721  ------------------------------------------------------------ 780
                                                                        
Sbjct: 721  VSTNATFLEEDHXRNHQPRSKIVLKEMFKNATDKPSSSTKVVDKANISDQSHTSQELRVP 780

Query: 781  -----------------ETQVIIPDDGVEDPLTYKQAMNDEDRDQWIKAMNLEMESMYFN 840
                             ETQ+IIPDDGVEDPLTYKQAMND DRDQWIKAMNLEMESMYFN
Sbjct: 781  RRSGRVVHQPNRYLGLVETQIIIPDDGVEDPLTYKQAMNDVDRDQWIKAMNLEMESMYFN 840

Query: 841  SVWELVNQPDGVKPIGCKWIYKRKRDQTGKVQTFKARLVAKDYTQREGVDYEETFSPVAM 900
            SVW LV+ P  VKPIGCKWIYKRKRDQ GKVQTFKARLVAK YTQ+EGVDYEETFSPVAM
Sbjct: 841  SVWTLVDLPSDVKPIGCKWIYKRKRDQAGKVQTFKARLVAKGYTQKEGVDYEETFSPVAM 900

Query: 901  LKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMAQPEGFIEQDHEQRVCKLKRSI 956
            LKSIRILLSIATFY+YEIWQMDVKTAFLNGNLEESIYM QPEGFI QD EQ+VCKL++SI
Sbjct: 901  LKSIRILLSIATFYNYEIWQMDVKTAFLNGNLEESIYMVQPEGFIAQDQEQKVCKLQKSI 960

BLAST of CmoCh20G011630 vs. ExPASy TrEMBL
Match: A0A5A7SMH8 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G002560 PE=4 SV=1)

HSP 1 Score: 1412.1 bits (3654), Expect = 0.0e+00
Identity = 769/1339 (57.43%), Postives = 866/1339 (64.68%), Query Frame = 0

Query: 1    MTNSIVQLLASEKLNGDNYTTWKSNLNTILVIDDLKFVLTKECPPNPNSNANRTARDAYD 60
            MT++ + +LA++KLNG+NY +WK+ +NT+L+IDDL+FVL +ECP  P +NA RT R+ Y+
Sbjct: 1    MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 61   RWIKANDKARVYILASISDVLAKKHDVMGTAKEIMESLKGMFGQPYFSLRHEAIKYIYNC 120
            RW KAN+KAR YILAS+S+VLAKKH+ M TA+EIM+SL+ MFGQ  + ++H+A+KYIYN 
Sbjct: 61   RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 121  RMKEGTSVREHVLDMMVHFNVAEENEAVIDEKSQVSFIMMSLPKSFFQFRTNVVMNKIEY 180
            RM EG SVREHVL+MMVHFNVAE N AVIDE SQVSFI+ SLP+SF QFR+N VMNKI Y
Sbjct: 121  RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 181  NLTALLNELQTYQSLLTNKGQTGEANVAIS-KKLLRGSSSKNKSGPSTSKGVLMKKK--G 240
             LT LLNELQT++SL+  KGQ GEANVA S +K  RGS+S  KS PS+S     KKK  G
Sbjct: 181  TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 240

Query: 241  KG-KNKIPTNRKNKVQKADKGKCFHCNENGHWKRNCPKYLVEKKAEK------------- 300
            +G K  +   +  K  KA KG CFHCN+ GHWKRNCPKYL EKK  K             
Sbjct: 241  QGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL 300

Query: 301  ------------------------------------------------------------ 360
                                                                        
Sbjct: 301  VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK 360

Query: 361  ------------------------------------------------------------ 420
                                                                        
Sbjct: 361  SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR 420

Query: 421  ------------------------------------------------------------ 480
                                                                        
Sbjct: 421  SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE 480

Query: 481  -------------------TQQGYRTKETLELVHTDLCGPMNVKARGGYEYFISFIDDYS 540
                               T +G+R KE LELVH+DLCGPMNVKARGG+EYFI+F DDYS
Sbjct: 481  NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS 540

Query: 541  RYGYLYLMHHKSEALEKFREYKTEVQNLLGKTIKTLRSDRGGEYMDLRFQDYMIEHGIRS 600
            RYGY+YLM HKSEALEKF+EYK EV+N L KTIKT RSDRGGEYMDL+FQ+Y++E GI S
Sbjct: 541  RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS 600

Query: 601  QLSAPGMPQQNGVSERRNRTLLDMVRSMMSFAQLPDPFWGYAVKTATYILNMVPTKSVSE 660
            QLSAPG PQQNGVSERRNRTLLDMVRSMMS+A LP+ FWGYAV+TA YILN VP+KSVSE
Sbjct: 601  QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE 660

Query: 661  TPYELWKGRK-------------------------------------------------- 720
            TP +LW GRK                                                  
Sbjct: 661  TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN 720

Query: 721  ------------------------------------------------------------ 780
                                                                        
Sbjct: 721  KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT 780

Query: 781  --------------------------ETQVIIPDDGVEDPLTYKQAMNDEDRDQWIKAMN 840
                                      ET  +I D  +EDPLT+K+AM D D+D+WIKAMN
Sbjct: 781  HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN 840

Query: 841  LEMESMYFNSVWELVNQPDGVKPIGCKWIYKRKRDQTGKVQTFKARLVAKDYTQREGVDY 900
            LE+ESMYFNSVW+LV+QPDGVKPIGCKWIYKRKR   GKVQTFKARLVAK YTQ EGVDY
Sbjct: 841  LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY 900

Query: 901  EETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMAQPEGFIEQDHEQ 960
            EETFSPVAMLKSIRILLSIA ++DYEIWQMDVKTAFLNGNLEE+IYM QPEGFI    EQ
Sbjct: 901  EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ 960

Query: 961  RVCKLKRSIYGLKQASRSWNIKFDTAIKSYGFKQNVDEPCVYKRIVNSTVAFLVLYVDDI 988
            ++CKL RSIYGLKQASRSWNI+FDTAIKSYGF Q VDEPCVYKRI+N +VAFLVLYVDDI
Sbjct: 961  KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI 1020

BLAST of CmoCh20G011630 vs. ExPASy TrEMBL
Match: A0A5D3CPJ6 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G00040 PE=4 SV=1)

HSP 1 Score: 1412.1 bits (3654), Expect = 0.0e+00
Identity = 769/1339 (57.43%), Postives = 866/1339 (64.68%), Query Frame = 0

Query: 1    MTNSIVQLLASEKLNGDNYTTWKSNLNTILVIDDLKFVLTKECPPNPNSNANRTARDAYD 60
            MT++ + +LA++KLNG+NY +WK+ +NT+L+IDDL+FVL +ECP  P +NA RT R+ Y+
Sbjct: 1    MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 61   RWIKANDKARVYILASISDVLAKKHDVMGTAKEIMESLKGMFGQPYFSLRHEAIKYIYNC 120
            RW KAN+KAR YILAS+S+VLAKKH+ M TA+EIM+SL+ MFGQ  + ++H+A+KYIYN 
Sbjct: 61   RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 121  RMKEGTSVREHVLDMMVHFNVAEENEAVIDEKSQVSFIMMSLPKSFFQFRTNVVMNKIEY 180
            RM EG SVREHVL+MMVHFNVAE N AVIDE SQVSFI+ SLP+SF QFR+N VMNKI Y
Sbjct: 121  RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 181  NLTALLNELQTYQSLLTNKGQTGEANVAIS-KKLLRGSSSKNKSGPSTSKGVLMKKK--G 240
             LT LLNELQT++SL+  KGQ GEANVA S +K  RGS+S  KS PS+S     KKK  G
Sbjct: 181  TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 240

Query: 241  KG-KNKIPTNRKNKVQKADKGKCFHCNENGHWKRNCPKYLVEKKAEK------------- 300
            +G K  +   +  K  KA KG CFHCN+ GHWKRNCPKYL EKK  K             
Sbjct: 241  QGNKANLAAAKTTKKTKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL 300

Query: 301  ------------------------------------------------------------ 360
                                                                        
Sbjct: 301  VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK 360

Query: 361  ------------------------------------------------------------ 420
                                                                        
Sbjct: 361  SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR 420

Query: 421  ------------------------------------------------------------ 480
                                                                        
Sbjct: 421  SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE 480

Query: 481  -------------------TQQGYRTKETLELVHTDLCGPMNVKARGGYEYFISFIDDYS 540
                               T +G+R KE LELVH+DLCGPMNVKARGG+EYFI+F DDYS
Sbjct: 481  NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS 540

Query: 541  RYGYLYLMHHKSEALEKFREYKTEVQNLLGKTIKTLRSDRGGEYMDLRFQDYMIEHGIRS 600
            RYGY+YLM HKSEALEKF+EYK EV+N L KTIKT RSDRGGEYMDL+FQ+Y++E GI S
Sbjct: 541  RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS 600

Query: 601  QLSAPGMPQQNGVSERRNRTLLDMVRSMMSFAQLPDPFWGYAVKTATYILNMVPTKSVSE 660
            QLSAPG PQQNGVSERRNRTLLDMVRSMMS+A LP+ FWGYAV+TA YILN VP+KSVSE
Sbjct: 601  QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE 660

Query: 661  TPYELWKGRK-------------------------------------------------- 720
            TP +LW GRK                                                  
Sbjct: 661  TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN 720

Query: 721  ------------------------------------------------------------ 780
                                                                        
Sbjct: 721  KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT 780

Query: 781  --------------------------ETQVIIPDDGVEDPLTYKQAMNDEDRDQWIKAMN 840
                                      ET  +I D  +EDPLT+K+AM D D+D+WIKAMN
Sbjct: 781  HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN 840

Query: 841  LEMESMYFNSVWELVNQPDGVKPIGCKWIYKRKRDQTGKVQTFKARLVAKDYTQREGVDY 900
            LE+ESMYFNSVW+LV+QPDGVKPIGCKWIYKRKR   GKVQTFKARLVAK YTQ EGVDY
Sbjct: 841  LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY 900

Query: 901  EETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMAQPEGFIEQDHEQ 960
            EETFSPVAMLKSIRILLSIA ++DYEIWQMDVKTAFLNGNLEE+IYM QPEGFI    EQ
Sbjct: 901  EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ 960

Query: 961  RVCKLKRSIYGLKQASRSWNIKFDTAIKSYGFKQNVDEPCVYKRIVNSTVAFLVLYVDDI 988
            ++CKL RSIYGLKQASRSWNI+FDTAIKSYGF Q VDEPCVYKRI+N +VAFLVLYVDDI
Sbjct: 961  KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI 1020

BLAST of CmoCh20G011630 vs. ExPASy TrEMBL
Match: A0A5A7TZD7 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold264G001300 PE=4 SV=1)

HSP 1 Score: 1408.3 bits (3644), Expect = 0.0e+00
Identity = 770/1339 (57.51%), Postives = 865/1339 (64.60%), Query Frame = 0

Query: 1    MTNSIVQLLASEKLNGDNYTTWKSNLNTILVIDDLKFVLTKECPPNPNSNANRTARDAYD 60
            MT++ + +LA++KLNG+NY +WK N NT+L+IDDL+FVL +ECP  P +NA RT R+ Y+
Sbjct: 1    MTSATLNMLAADKLNGNNYASWK-NTNTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 61   RWIKANDKARVYILASISDVLAKKHDVMGTAKEIMESLKGMFGQPYFSLRHEAIKYIYNC 120
            RW KAN+KAR YILAS+S+VLAKKH+ M TA+EIM+SL+ MFGQ  + ++H+A+KYIYN 
Sbjct: 61   RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 121  RMKEGTSVREHVLDMMVHFNVAEENEAVIDEKSQVSFIMMSLPKSFFQFRTNVVMNKIEY 180
            RM EG SVREHVL+MMVHFNVAE N AVIDE SQVSFI+ SLP+SF QFR+N VMNKI Y
Sbjct: 121  RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 181  NLTALLNELQTYQSLLTNKGQTGEANVAIS-KKLLRGSSSKNKSGPSTSKGVLMKKK--G 240
             LT LLNELQT++SL+  KGQ GEANVA S +K  RGS+S  KS PS+S     KKK  G
Sbjct: 181  TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 240

Query: 241  KG-KNKIPTNRKNKVQKADKGKCFHCNENGHWKRNCPKYLVEKKAEK------------- 300
            +G K  +   +  K  KA KG CFHCN+ GHWKRNCPKYL EKK  K             
Sbjct: 241  QGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL 300

Query: 301  ------------------------------------------------------------ 360
                                                                        
Sbjct: 301  VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK 360

Query: 361  ------------------------------------------------------------ 420
                                                                        
Sbjct: 361  SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR 420

Query: 421  ------------------------------------------------------------ 480
                                                                        
Sbjct: 421  SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE 480

Query: 481  -------------------TQQGYRTKETLELVHTDLCGPMNVKARGGYEYFISFIDDYS 540
                               T +G+R KE LELVH+DLCGPMNVKARGG+EYFI+F DDYS
Sbjct: 481  NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS 540

Query: 541  RYGYLYLMHHKSEALEKFREYKTEVQNLLGKTIKTLRSDRGGEYMDLRFQDYMIEHGIRS 600
            RYGY+YLM HKSEALEKF+EYK EV+N L KTIKT RSDRGGEYMDL+FQ+Y++E GI S
Sbjct: 541  RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS 600

Query: 601  QLSAPGMPQQNGVSERRNRTLLDMVRSMMSFAQLPDPFWGYAVKTATYILNMVPTKSVSE 660
            QLSAPG PQQNGVSERRNRTLLDMVRSMMS+A LP+ FWGYAV+TA YILN VP+KSVSE
Sbjct: 601  QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE 660

Query: 661  TPYELWKGRK-------------------------------------------------- 720
            TP +LW GRK                                                  
Sbjct: 661  TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN 720

Query: 721  ------------------------------------------------------------ 780
                                                                        
Sbjct: 721  KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT 780

Query: 781  --------------------------ETQVIIPDDGVEDPLTYKQAMNDEDRDQWIKAMN 840
                                      ET  +I D  +EDPLT+K+AM D D+D+WIKAMN
Sbjct: 781  HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN 840

Query: 841  LEMESMYFNSVWELVNQPDGVKPIGCKWIYKRKRDQTGKVQTFKARLVAKDYTQREGVDY 900
            LE+ESMYFNSVW+LV+QPDGVKPIGCKWIYKRKR   GKVQTFKARLVAK YTQ EGVDY
Sbjct: 841  LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY 900

Query: 901  EETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMAQPEGFIEQDHEQ 960
            EETFSPVAMLKSIRILLSIA ++DYEIWQMDVKTAFLNGNLEE+IYM QPEGFI    EQ
Sbjct: 901  EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ 960

Query: 961  RVCKLKRSIYGLKQASRSWNIKFDTAIKSYGFKQNVDEPCVYKRIVNSTVAFLVLYVDDI 988
            ++CKL RSIYGLKQASRSWNI+FDTAIKSYGF Q VDEPCVYKRI+N +VAFLVLYVDDI
Sbjct: 961  KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI 1020

BLAST of CmoCh20G011630 vs. NCBI nr
Match: KAA0026233.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1473.8 bits (3814), Expect = 0.0e+00
Identity = 761/1136 (66.99%), Postives = 862/1136 (75.88%), Query Frame = 0

Query: 1    MTNSIVQLLASEKLNGDNYTTWKSNLNTILVIDDLKFVLTKECPPNPNSNANRTARDAYD 60
            ++++ + +LA++KLNG+NY +WK+ +N +L+IDDL+FVL ++CP  P +NA RT R+ Y+
Sbjct: 63   LSSATLNMLAADKLNGNNYASWKNTINIVLIIDDLRFVLVEDCPQVPAANATRTVREPYE 122

Query: 61   RWIKANDKARVYILASISDVLAKKHDVMGTAKEIMESLKGMFGQPYFSLRHEAIKYIYNC 120
            RW KAN+KAR YILAS+S+VLAKKH+ M TA+EIM+SL+ MFGQ  + ++H+A+KYIYN 
Sbjct: 123  RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 182

Query: 121  RMKEGTSVREHVLDMMVHFNVAEENEAVIDEKSQVSFIMMSLPKSFFQFRTNVVMNKIEY 180
            RM EG SVREHVL+MMVHFNVA  NEAVIDE SQVSFI+ SLP+SF QFR+N VMNKI Y
Sbjct: 183  RMNEGASVREHVLNMMVHFNVAVMNEAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 242

Query: 181  NLTALLNELQTYQSLLTNKGQTGEANVAIS-KKLLRGSSSKNKSGPSTSKGVLMKKK--G 240
             LT LLNELQT++SL+  KGQ GEANVA S +K  RGS+S  KS PS+S     KKK  G
Sbjct: 243  TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 302

Query: 241  KG-KNKIPTNRKNKVQKADKGKCFHCNENGHWKRNCPKYLVEKKAEK---------TQQG 300
            +G K  +   +  K  KA KG CF CN+ GHWKRNCPKYL +KK  K         T +G
Sbjct: 303  QGNKANLAAAKTTKKAKAAKGICFLCNQEGHWKRNCPKYLAKKKKAKQGKMTKRPFTGKG 362

Query: 301  YRTKETLELVHTDLCGPMNVKARGGYEYFISFIDDYSRYGYLYLMHHKSEALEKFREYKT 360
            +R KE LELVH+DLCGPMNVKARGG+EYFI+F DDYSRYGY+YLM HKSEALEKF+EYK 
Sbjct: 363  HRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKA 422

Query: 361  EVQNLLGKTIKTLRSDRGGEYMDLRFQDYMIEHGIRSQLSAPGMPQQNGVSERRNRTLLD 420
            EV+N L KTIKT RSDRGGEYMDL+FQ+Y++E GI SQLSAP  PQQNGVSERRNRTLLD
Sbjct: 423  EVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPDTPQQNGVSERRNRTLLD 482

Query: 421  MVRSMMSFAQLPDPFWGYAVKTATYILNMVPTKSVSETPYELWKGRK------------- 480
            MVRSMMS+A LP+ FWGYAV+TA YILN VP+KSVSETP +LW G K             
Sbjct: 483  MVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGHKGSLRHFRIWGCPA 542

Query: 481  ------------------------------------------------------------ 540
                                                                        
Sbjct: 543  HVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRS 602

Query: 541  ------------------------------------------------------------ 600
                                                                        
Sbjct: 603  KIVLNELSKETTEPSTRVVEEPSALIRVVHVRSSTRTHQPQSLREPRRSGRVTNLPIRYM 662

Query: 601  ---ETQVIIPDDGVEDPLTYKQAMNDEDRDQWIKAMNLEMESMYFNSVWELVNQPDGVKP 660
               ET  +I D  +EDPLT+K+AM D D+D+WIKAMNLE+ESMYFNSVW+LV+QPDGVKP
Sbjct: 663  SLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKP 722

Query: 661  IGCKWIYKRKRDQTGKVQTFKARLVAKDYTQREGVDYEETFSPVAMLKSIRILLSIATFY 720
            IGCKWIYKRKR   GKVQTFKARLVAK YTQ EGVDYEETFSPVAMLKSIRILLSIA ++
Sbjct: 723  IGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYF 782

Query: 721  DYEIWQMDVKTAFLNGNLEESIYMAQPEGFIEQDHEQRVCKLKRSIYGLKQASRSWNIKF 780
            DYEIWQMDVKTAFLNGNLEE+IYM QPEGFI    EQ++CKL RSIYGLKQASRSWNI+F
Sbjct: 783  DYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRF 842

Query: 781  DTAIKSYGFKQNVDEPCVYKRIVNSTVAFLVLYVDDILLIGNDVGILTDIKHWLATQFQM 840
            DTAIKSYGF Q VDEPCVYKRI+N +VAFLVLYVDDILLIGND+G+LTDIK WLATQFQM
Sbjct: 843  DTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDIKQWLATQFQM 902

Query: 841  KDLGEAQFVLGIQIVRNRKNKTLALSQASNIDKMLIRYKMQDSKKGLLPFRHGVHLSKEQ 900
            KDLGEAQFVLGIQI R+RKNK LALSQAS IDK++++Y MQ+SK+GLLPFRHGV LSKEQ
Sbjct: 903  KDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQ 962

Query: 901  SPKTPQEVEDMKHIPYASAVGSLMYAMLCTRPDICYVVGIVSRYQSNPGRAHWTAVKNIL 960
             PKTPQ+VE+M+HIPYASAVGSLMYAMLCTRPDICY VGIVSRYQSNPG AHWTAVK IL
Sbjct: 963  CPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTIL 1022

Query: 961  KYLRRTRDYMLMYGAKDLILTGYTDSDFQTDVDSRKSTSRSVFTLNGGAIIWRSIKQGCI 988
            KYLRRTRDY L+YG+KDLILTGYTDSDFQTD DSRKSTS SVFTLNGGA++WRSIKQGCI
Sbjct: 1023 KYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCI 1082

BLAST of CmoCh20G011630 vs. NCBI nr
Match: ADJ18449.1 (gag/pol protein, partial [Bryonia dioica])

HSP 1 Score: 1450.6 bits (3754), Expect = 0.0e+00
Identity = 788/1298 (60.71%), Postives = 869/1298 (66.95%), Query Frame = 0

Query: 1    MTNSIVQLLASEKLNGDNYTTWKSNLNTILVIDDLKFVLTKECPPNPNSNANRTARDAYD 60
            M  SIVQLLASEKLNGDNY+ WKSNLNTILV+DDL+FVLT+ECP  P  NANRT R+AYD
Sbjct: 1    MNTSIVQLLASEKLNGDNYSAWKSNLNTILVVDDLRFVLTEECPQAPALNANRTVREAYD 60

Query: 61   RWIKANDKARVYILASISDVLAKKHDVMGTAKEIMESLKGMFGQPYFSLRHEAIKYIYNC 120
            RW+KANDKARVYILAS++DVLAKKHD + TAK IM+SL+ MFGQP +SLRHEAIK+IY  
Sbjct: 61   RWVKANDKARVYILASMTDVLAKKHDSIATAKGIMDSLREMFGQPSWSLRHEAIKHIYTK 120

Query: 121  RMKEGTSVREHVLDMMVHFNVAEENEAVIDEKSQVSFIMMSLPKSFFQFRTNVVMNKIEY 180
            RMKEGTSVREHVLDMM+HFN+AE N   IDE +QVSFI+ SLPKSF  F+TN  +NKIE+
Sbjct: 121  RMKEGTSVREHVLDMMMHFNIAEVNGGPIDEANQVSFILQSLPKSFVPFQTNASLNKIEF 180

Query: 181  NLTALLNELQTYQSLLTNKGQTGEANVAISK-KLLRGSSSKNKSGPSTSKGVLMKKKGKG 240
            NLT LLNELQ +Q+L  +KG+  EANVA++K K +RGSSSKNK GPS ++   MKKKGKG
Sbjct: 181  NLTTLLNELQRFQNLTLSKGKEVEANVAVTKRKFIRGSSSKNKVGPSKAQ---MKKKGKG 240

Query: 241  KNKIPTNRKNKVQKADKGKCFHCNENGHWKRNCPKYLVEKKAEKTQQG------------ 300
              K P   K K + ADKGKCFHCN++GHWKRNCPKYL EKKAEK  QG            
Sbjct: 241  --KAPNTSKVK-KNADKGKCFHCNQDGHWKRNCPKYLAEKKAEKATQGKYDLLVVETCLV 300

Query: 301  ------------------------------------------------------------ 360
                                                                        
Sbjct: 301  ECDASTWILDSGATNHICFSFQETSSWKKLKEGEITLKVGTGEVVSAEAVGDLTLFFQDR 360

Query: 361  ------------------------------------------------------------ 420
                                                                        
Sbjct: 361  YLILKDVLYVPLMKRNLISIACILEHIYTISFEVNEVFILCKGIQICSAIRENNLYKLRP 420

Query: 421  -----------YRTKET------------------------------------------- 480
                       +RT ET                                           
Sbjct: 421  TRANVVLNTEMFRTLETQNKKQKVSSNAYLWHLRLGHINLNRIERLVKSGILNQLEDNSL 480

Query: 481  --------------------------LELVHTDLCGPMNVKARGGYEYFISFIDDYSRYG 540
                                      LELVH+DLCGPMNVKARGGYEYFISFIDD+SRYG
Sbjct: 481  PPCESCLEGKMTKRSFTGKGLRAKVPLELVHSDLCGPMNVKARGGYEYFISFIDDFSRYG 540

Query: 541  YLYLMHHKSEALEKFREYKTEVQNLLGKTIKTLRSDRGGEYMDLRFQDYMIEHGIRSQLS 600
            ++YL+HHKSE+ EKF+EYK EV+N +GKTIKTLRSDRGGEYMD +FQDY+IE GI+SQLS
Sbjct: 541  HVYLLHHKSESFEKFKEYKAEVENEIGKTIKTLRSDRGGEYMDSKFQDYLIEFGIQSQLS 600

Query: 601  APGMPQQNGVSERRNRTLLDMVRSMMSFAQLPDPFWGYAVKTATYILNMVPTKSVSETPY 660
            AP  PQQNGVSERRNRTLLDMVRSMMS+AQLPD FWGYA++TA +ILN VP+KSV ETPY
Sbjct: 601  APSTPQQNGVSERRNRTLLDMVRSMMSYAQLPDSFWGYALETAIHILNNVPSKSVLETPY 660

Query: 661  ELWKGRK----------------------------------------------------- 720
            ELWKGRK                                                     
Sbjct: 661  ELWKGRKSSLRYFRIWGCPAHVLVQNPKKLEPRSKLCLFVGYPKESRGGLFYHPQENKVF 720

Query: 721  ------------------------------------------------------------ 780
                                                                        
Sbjct: 721  VSTNATFLEEDHXRNHQPRSKIVLKEMFKNATDKPSSSTKVVDKANISDQSHTSQELRVP 780

Query: 781  -----------------ETQVIIPDDGVEDPLTYKQAMNDEDRDQWIKAMNLEMESMYFN 840
                             ETQ+IIPDDGVEDPLTYKQAMND DRDQWIKAMNLEMESMYFN
Sbjct: 781  RRSGRVVHQPNRYLGLVETQIIIPDDGVEDPLTYKQAMNDVDRDQWIKAMNLEMESMYFN 840

Query: 841  SVWELVNQPDGVKPIGCKWIYKRKRDQTGKVQTFKARLVAKDYTQREGVDYEETFSPVAM 900
            SVW LV+ P  VKPIGCKWIYKRKRDQ GKVQTFKARLVAK YTQ+EGVDYEETFSPVAM
Sbjct: 841  SVWTLVDLPSDVKPIGCKWIYKRKRDQAGKVQTFKARLVAKGYTQKEGVDYEETFSPVAM 900

Query: 901  LKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMAQPEGFIEQDHEQRVCKLKRSI 956
            LKSIRILLSIATFY+YEIWQMDVKTAFLNGNLEESIYM QPEGFI QD EQ+VCKL++SI
Sbjct: 901  LKSIRILLSIATFYNYEIWQMDVKTAFLNGNLEESIYMVQPEGFIAQDQEQKVCKLQKSI 960

BLAST of CmoCh20G011630 vs. NCBI nr
Match: KAA0035879.1 (gag/pol protein [Cucumis melo var. makuwa] >KAA0044276.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0051221.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0051893.1 gag/pol protein [Cucumis melo var. makuwa] >TYK00551.1 gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1412.1 bits (3654), Expect = 0.0e+00
Identity = 769/1339 (57.43%), Postives = 866/1339 (64.68%), Query Frame = 0

Query: 1    MTNSIVQLLASEKLNGDNYTTWKSNLNTILVIDDLKFVLTKECPPNPNSNANRTARDAYD 60
            MT++ + +LA++KLNG+NY +WK+ +NT+L+IDDL+FVL +ECP  P +NA RT R+ Y+
Sbjct: 1    MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 61   RWIKANDKARVYILASISDVLAKKHDVMGTAKEIMESLKGMFGQPYFSLRHEAIKYIYNC 120
            RW KAN+KAR YILAS+S+VLAKKH+ M TA+EIM+SL+ MFGQ  + ++H+A+KYIYN 
Sbjct: 61   RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 121  RMKEGTSVREHVLDMMVHFNVAEENEAVIDEKSQVSFIMMSLPKSFFQFRTNVVMNKIEY 180
            RM EG SVREHVL+MMVHFNVAE N AVIDE SQVSFI+ SLP+SF QFR+N VMNKI Y
Sbjct: 121  RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 181  NLTALLNELQTYQSLLTNKGQTGEANVAIS-KKLLRGSSSKNKSGPSTSKGVLMKKK--G 240
             LT LLNELQT++SL+  KGQ GEANVA S +K  RGS+S  KS PS+S     KKK  G
Sbjct: 181  TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 240

Query: 241  KG-KNKIPTNRKNKVQKADKGKCFHCNENGHWKRNCPKYLVEKKAEK------------- 300
            +G K  +   +  K  KA KG CFHCN+ GHWKRNCPKYL EKK  K             
Sbjct: 241  QGNKANLAAAKTTKKTKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL 300

Query: 301  ------------------------------------------------------------ 360
                                                                        
Sbjct: 301  VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK 360

Query: 361  ------------------------------------------------------------ 420
                                                                        
Sbjct: 361  SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR 420

Query: 421  ------------------------------------------------------------ 480
                                                                        
Sbjct: 421  SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE 480

Query: 481  -------------------TQQGYRTKETLELVHTDLCGPMNVKARGGYEYFISFIDDYS 540
                               T +G+R KE LELVH+DLCGPMNVKARGG+EYFI+F DDYS
Sbjct: 481  NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS 540

Query: 541  RYGYLYLMHHKSEALEKFREYKTEVQNLLGKTIKTLRSDRGGEYMDLRFQDYMIEHGIRS 600
            RYGY+YLM HKSEALEKF+EYK EV+N L KTIKT RSDRGGEYMDL+FQ+Y++E GI S
Sbjct: 541  RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS 600

Query: 601  QLSAPGMPQQNGVSERRNRTLLDMVRSMMSFAQLPDPFWGYAVKTATYILNMVPTKSVSE 660
            QLSAPG PQQNGVSERRNRTLLDMVRSMMS+A LP+ FWGYAV+TA YILN VP+KSVSE
Sbjct: 601  QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE 660

Query: 661  TPYELWKGRK-------------------------------------------------- 720
            TP +LW GRK                                                  
Sbjct: 661  TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN 720

Query: 721  ------------------------------------------------------------ 780
                                                                        
Sbjct: 721  KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT 780

Query: 781  --------------------------ETQVIIPDDGVEDPLTYKQAMNDEDRDQWIKAMN 840
                                      ET  +I D  +EDPLT+K+AM D D+D+WIKAMN
Sbjct: 781  HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN 840

Query: 841  LEMESMYFNSVWELVNQPDGVKPIGCKWIYKRKRDQTGKVQTFKARLVAKDYTQREGVDY 900
            LE+ESMYFNSVW+LV+QPDGVKPIGCKWIYKRKR   GKVQTFKARLVAK YTQ EGVDY
Sbjct: 841  LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY 900

Query: 901  EETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMAQPEGFIEQDHEQ 960
            EETFSPVAMLKSIRILLSIA ++DYEIWQMDVKTAFLNGNLEE+IYM QPEGFI    EQ
Sbjct: 901  EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ 960

Query: 961  RVCKLKRSIYGLKQASRSWNIKFDTAIKSYGFKQNVDEPCVYKRIVNSTVAFLVLYVDDI 988
            ++CKL RSIYGLKQASRSWNI+FDTAIKSYGF Q VDEPCVYKRI+N +VAFLVLYVDDI
Sbjct: 961  KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI 1020

BLAST of CmoCh20G011630 vs. NCBI nr
Match: KAA0031826.1 (gag/pol protein [Cucumis melo var. makuwa] >KAA0032384.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0039313.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0043789.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0048789.1 gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1412.1 bits (3654), Expect = 0.0e+00
Identity = 769/1339 (57.43%), Postives = 866/1339 (64.68%), Query Frame = 0

Query: 1    MTNSIVQLLASEKLNGDNYTTWKSNLNTILVIDDLKFVLTKECPPNPNSNANRTARDAYD 60
            MT++ + +LA++KLNG+NY +WK+ +NT+L+IDDL+FVL +ECP  P +NA RT R+ Y+
Sbjct: 1    MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 61   RWIKANDKARVYILASISDVLAKKHDVMGTAKEIMESLKGMFGQPYFSLRHEAIKYIYNC 120
            RW KAN+KAR YILAS+S+VLAKKH+ M TA+EIM+SL+ MFGQ  + ++H+A+KYIYN 
Sbjct: 61   RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 121  RMKEGTSVREHVLDMMVHFNVAEENEAVIDEKSQVSFIMMSLPKSFFQFRTNVVMNKIEY 180
            RM EG SVREHVL+MMVHFNVAE N AVIDE SQVSFI+ SLP+SF QFR+N VMNKI Y
Sbjct: 121  RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 181  NLTALLNELQTYQSLLTNKGQTGEANVAIS-KKLLRGSSSKNKSGPSTSKGVLMKKK--G 240
             LT LLNELQT++SL+  KGQ GEANVA S +K  RGS+S  KS PS+S     KKK  G
Sbjct: 181  TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 240

Query: 241  KG-KNKIPTNRKNKVQKADKGKCFHCNENGHWKRNCPKYLVEKKAEK------------- 300
            +G K  +   +  K  KA KG CFHCN+ GHWKRNCPKYL EKK  K             
Sbjct: 241  QGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL 300

Query: 301  ------------------------------------------------------------ 360
                                                                        
Sbjct: 301  VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK 360

Query: 361  ------------------------------------------------------------ 420
                                                                        
Sbjct: 361  SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR 420

Query: 421  ------------------------------------------------------------ 480
                                                                        
Sbjct: 421  SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE 480

Query: 481  -------------------TQQGYRTKETLELVHTDLCGPMNVKARGGYEYFISFIDDYS 540
                               T +G+R KE LELVH+DLCGPMNVKARGG+EYFI+F DDYS
Sbjct: 481  NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS 540

Query: 541  RYGYLYLMHHKSEALEKFREYKTEVQNLLGKTIKTLRSDRGGEYMDLRFQDYMIEHGIRS 600
            RYGY+YLM HKSEALEKF+EYK EV+N L KTIKT RSDRGGEYMDL+FQ+Y++E GI S
Sbjct: 541  RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS 600

Query: 601  QLSAPGMPQQNGVSERRNRTLLDMVRSMMSFAQLPDPFWGYAVKTATYILNMVPTKSVSE 660
            QLSAPG PQQNGVSERRNRTLLDMVRSMMS+A LP+ FWGYAV+TA YILN VP+KSVSE
Sbjct: 601  QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE 660

Query: 661  TPYELWKGRK-------------------------------------------------- 720
            TP +LW GRK                                                  
Sbjct: 661  TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN 720

Query: 721  ------------------------------------------------------------ 780
                                                                        
Sbjct: 721  KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT 780

Query: 781  --------------------------ETQVIIPDDGVEDPLTYKQAMNDEDRDQWIKAMN 840
                                      ET  +I D  +EDPLT+K+AM D D+D+WIKAMN
Sbjct: 781  HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN 840

Query: 841  LEMESMYFNSVWELVNQPDGVKPIGCKWIYKRKRDQTGKVQTFKARLVAKDYTQREGVDY 900
            LE+ESMYFNSVW+LV+QPDGVKPIGCKWIYKRKR   GKVQTFKARLVAK YTQ EGVDY
Sbjct: 841  LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY 900

Query: 901  EETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMAQPEGFIEQDHEQ 960
            EETFSPVAMLKSIRILLSIA ++DYEIWQMDVKTAFLNGNLEE+IYM QPEGFI    EQ
Sbjct: 901  EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ 960

Query: 961  RVCKLKRSIYGLKQASRSWNIKFDTAIKSYGFKQNVDEPCVYKRIVNSTVAFLVLYVDDI 988
            ++CKL RSIYGLKQASRSWNI+FDTAIKSYGF Q VDEPCVYKRI+N +VAFLVLYVDDI
Sbjct: 961  KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI 1020

BLAST of CmoCh20G011630 vs. NCBI nr
Match: KAA0048404.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1408.3 bits (3644), Expect = 0.0e+00
Identity = 770/1339 (57.51%), Postives = 865/1339 (64.60%), Query Frame = 0

Query: 1    MTNSIVQLLASEKLNGDNYTTWKSNLNTILVIDDLKFVLTKECPPNPNSNANRTARDAYD 60
            MT++ + +LA++KLNG+NY +WK N NT+L+IDDL+FVL +ECP  P +NA RT R+ Y+
Sbjct: 1    MTSATLNMLAADKLNGNNYASWK-NTNTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 61   RWIKANDKARVYILASISDVLAKKHDVMGTAKEIMESLKGMFGQPYFSLRHEAIKYIYNC 120
            RW KAN+KAR YILAS+S+VLAKKH+ M TA+EIM+SL+ MFGQ  + ++H+A+KYIYN 
Sbjct: 61   RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 121  RMKEGTSVREHVLDMMVHFNVAEENEAVIDEKSQVSFIMMSLPKSFFQFRTNVVMNKIEY 180
            RM EG SVREHVL+MMVHFNVAE N AVIDE SQVSFI+ SLP+SF QFR+N VMNKI Y
Sbjct: 121  RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 181  NLTALLNELQTYQSLLTNKGQTGEANVAIS-KKLLRGSSSKNKSGPSTSKGVLMKKK--G 240
             LT LLNELQT++SL+  KGQ GEANVA S +K  RGS+S  KS PS+S     KKK  G
Sbjct: 181  TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 240

Query: 241  KG-KNKIPTNRKNKVQKADKGKCFHCNENGHWKRNCPKYLVEKKAEK------------- 300
            +G K  +   +  K  KA KG CFHCN+ GHWKRNCPKYL EKK  K             
Sbjct: 241  QGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL 300

Query: 301  ------------------------------------------------------------ 360
                                                                        
Sbjct: 301  VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK 360

Query: 361  ------------------------------------------------------------ 420
                                                                        
Sbjct: 361  SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR 420

Query: 421  ------------------------------------------------------------ 480
                                                                        
Sbjct: 421  SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE 480

Query: 481  -------------------TQQGYRTKETLELVHTDLCGPMNVKARGGYEYFISFIDDYS 540
                               T +G+R KE LELVH+DLCGPMNVKARGG+EYFI+F DDYS
Sbjct: 481  NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS 540

Query: 541  RYGYLYLMHHKSEALEKFREYKTEVQNLLGKTIKTLRSDRGGEYMDLRFQDYMIEHGIRS 600
            RYGY+YLM HKSEALEKF+EYK EV+N L KTIKT RSDRGGEYMDL+FQ+Y++E GI S
Sbjct: 541  RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS 600

Query: 601  QLSAPGMPQQNGVSERRNRTLLDMVRSMMSFAQLPDPFWGYAVKTATYILNMVPTKSVSE 660
            QLSAPG PQQNGVSERRNRTLLDMVRSMMS+A LP+ FWGYAV+TA YILN VP+KSVSE
Sbjct: 601  QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE 660

Query: 661  TPYELWKGRK-------------------------------------------------- 720
            TP +LW GRK                                                  
Sbjct: 661  TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN 720

Query: 721  ------------------------------------------------------------ 780
                                                                        
Sbjct: 721  KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT 780

Query: 781  --------------------------ETQVIIPDDGVEDPLTYKQAMNDEDRDQWIKAMN 840
                                      ET  +I D  +EDPLT+K+AM D D+D+WIKAMN
Sbjct: 781  HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN 840

Query: 841  LEMESMYFNSVWELVNQPDGVKPIGCKWIYKRKRDQTGKVQTFKARLVAKDYTQREGVDY 900
            LE+ESMYFNSVW+LV+QPDGVKPIGCKWIYKRKR   GKVQTFKARLVAK YTQ EGVDY
Sbjct: 841  LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY 900

Query: 901  EETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMAQPEGFIEQDHEQ 960
            EETFSPVAMLKSIRILLSIA ++DYEIWQMDVKTAFLNGNLEE+IYM QPEGFI    EQ
Sbjct: 901  EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ 960

Query: 961  RVCKLKRSIYGLKQASRSWNIKFDTAIKSYGFKQNVDEPCVYKRIVNSTVAFLVLYVDDI 988
            ++CKL RSIYGLKQASRSWNI+FDTAIKSYGF Q VDEPCVYKRI+N +VAFLVLYVDDI
Sbjct: 961  KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI 1020

BLAST of CmoCh20G011630 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 292.4 bits (747), Expect = 1.4e-78
Identity = 169/484 (34.92%), Postives = 270/484 (55.79%), Query Frame = 0

Query: 466 EDPLTYKQAMNDEDRDQWIKAMNLEMESMYFNSVWELVNQPDGVKPIGCKWIYKRKRDQT 525
           ++P TY +A   ++   W  AM+ E+ +M     WE+   P   KPIGCKW+YK K +  
Sbjct: 84  KEPSTYNEA---KEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSD 143

Query: 526 GKVQTFKARLVAKDYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFL 585
           G ++ +KARLVAK YTQ+EG+D+ ETFSPV  L S++++L+I+  Y++ + Q+D+  AFL
Sbjct: 144 GTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFL 203

Query: 586 NGNLEESIYMAQPEGFIEQDHE----QRVCKLKRSIYGLKQASRSWNIKFDTAIKSYGFK 645
           NG+L+E IYM  P G+  +  +      VC LK+SIYGLKQASR W +KF   +  +GF 
Sbjct: 204 NGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFV 263

Query: 646 QNVDEPCVYKRIVNSTVAFLVLYVDDILLIGNDVGILTDIKHWLATQFQMKDLGEAQFVL 705
           Q+  +   + +I  +    +++YVDDI++  N+   + ++K  L + F+++DLG  ++ L
Sbjct: 264 QSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFL 323

Query: 706 GIQIVRNRKNKTLALSQASNIDKMLIRYKMQDSKKGLLPFRHGVHLSKEQSPKTPQEVED 765
           G++I R+     + + Q      +L    +   K   +P    V  S         +  D
Sbjct: 324 GLEIARSAAG--INICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSG----GDFVD 383

Query: 766 MKHIPYASAVGSLMYAMLCTRPDICYVVGIVSRYQSNPGRAHWTAVKNILKYLRRTRDYM 825
            K   Y   +G LMY  + TR DI + V  +S++   P  AH  AV  IL Y++ T    
Sbjct: 384 AK--AYRRLIGRLMYLQI-TRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQG 443

Query: 826 LMYGAK-DLILTGYTDSDFQTDVDSRKSTSRSVFTLNGGAIIWRSIKQGCIADSTMEAEY 885
           L Y ++ ++ L  ++D+ FQ+  D+R+ST+     L    I W+S KQ  ++ S+ EAEY
Sbjct: 444 LFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEY 503

Query: 886 VAACEAAKESVWLRKFLTDLEVVPNMHLPVTLYCDNSGAVANSKEPRSHKRGKHIERKYH 945
            A   A  E +WL +F  +L++   +  P  L+CDN+ A+  +     H+R KHIE   H
Sbjct: 504 RALSFATDEMMWLAQFFRELQL--PLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCH 553

BLAST of CmoCh20G011630 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 96.7 bits (239), Expect = 1.1e-19
Identity = 75/234 (32.05%), Postives = 115/234 (49.15%), Query Frame = 0

Query: 660 FLVLYVDDILLIGNDVGILTDIKHWLATQFQMKDLGEAQFVLGIQIVRNRKNKTLALSQA 719
           +L+LYVDDILL G+   +L  +   L++ F MKDLG   + LGIQI  +     L LSQ 
Sbjct: 2   YLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSG--LFLSQT 61

Query: 720 SNIDKMLIRYKMQDSKKGLLPFRHGVHLSKEQSPKTPQEVEDMKHIPYASAVGSLMYAML 779
              +++L    M D K    P    ++ S   + K P   +      + S VG+L Y  L
Sbjct: 62  KYAEQILNNAGMLDCKPMSTPLPLKLN-SSVSTAKYPDPSD------FRSIVGALQYLTL 121

Query: 780 CTRPDICYVVGIVSRYQSNPGRAHWTAVKNILKYLRRTRDY-MLMYGAKDLILTGYTDSD 839
            TRPDI Y V IV +    P  A +  +K +L+Y++ T  + + ++    L +  + DSD
Sbjct: 122 -TRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSD 181

Query: 840 FQTDVDSRKSTSRSVFTLNGGAIIWRSIKQGCIADSTMEAEYVAACEAAKESVW 893
           +     +R+ST+     L    I W + +Q  ++ S+ E EY A    A E  W
Sbjct: 182 WAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

BLAST of CmoCh20G011630 vs. TAIR 10
Match: ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )

HSP 1 Score: 77.8 bits (190), Expect = 5.4e-14
Identity = 35/86 (40.70%), Postives = 52/86 (60.47%), Query Frame = 0

Query: 483 WIKAMNLEMESMYFNSVWELVNQPDGVKPIGCKWIYKRKRDQTGKVQTFKARLVAKDYTQ 542
           W +AM  E++++  N  W LV  P     +GCKW++K K    G +   KARLVAK + Q
Sbjct: 40  WCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQ 99

Query: 543 REGVDYEETFSPVAMLKSIRILLSIA 569
            EG+ + ET+SPV    +IR +L++A
Sbjct: 100 EEGIYFVETYSPVVRTATIRTILNVA 125

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
P109789.3e-16038.11Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... [more]
P041466.3e-10026.89Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3[more]
Q9ZT941.4e-8635.96Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... [more]
Q94HW22.2e-8436.35Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... [more]
P256001.9e-3533.12Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain AT... [more]
Match NameE-valueIdentityDescription
A0A5A7SNP80.0e+0066.99Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19G00216... [more]
E2GK510.0e+0060.71Gag/pol protein (Fragment) OS=Bryonia dioica OX=3652 PE=4 SV=1[more]
A0A5A7SMH80.0e+0057.43Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G0025... [more]
A0A5D3CPJ60.0e+0057.43Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G0004... [more]
A0A5A7TZD70.0e+0057.51Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold264G0013... [more]
Match NameE-valueIdentityDescription
KAA0026233.10.0e+0066.99gag/pol protein [Cucumis melo var. makuwa][more]
ADJ18449.10.0e+0060.71gag/pol protein, partial [Bryonia dioica][more]
KAA0035879.10.0e+0057.43gag/pol protein [Cucumis melo var. makuwa] >KAA0044276.1 gag/pol protein [Cucumi... [more]
KAA0031826.10.0e+0057.43gag/pol protein [Cucumis melo var. makuwa] >KAA0032384.1 gag/pol protein [Cucumi... [more]
KAA0048404.10.0e+0057.51gag/pol protein [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
AT4G23160.11.4e-7834.92cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [more]
ATMG00810.11.1e-1932.05DNA/RNA polymerases superfamily protein [more]
ATMG00820.15.4e-1440.70Reverse transcriptase (RNA-dependent DNA polymerase) [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 335..355
NoneNo IPR availableGENE3D4.10.60.10coord: 232..286
e-value: 9.0E-8
score: 33.9
NoneNo IPR availablePFAMPF14223Retrotran_gag_2coord: 62..192
e-value: 8.4E-16
score: 58.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 213..250
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 213..228
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 233..247
NoneNo IPR availablePANTHERPTHR45895FAMILY NOT NAMEDcoord: 466..824
coord: 270..451
NoneNo IPR availableCDDcd09272RNase_HI_RT_Ty1coord: 832..973
e-value: 1.21032E-63
score: 209.247
IPR001878Zinc finger, CCHC-typeSMARTSM00343c2hcfinal6coord: 258..274
e-value: 0.0026
score: 27.0
IPR001878Zinc finger, CCHC-typePFAMPF00098zf-CCHCcoord: 257..274
e-value: 7.8E-5
score: 22.6
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 258..274
score: 9.949409
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 497..740
e-value: 1.5E-70
score: 237.5
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 287..485
e-value: 5.4E-38
score: 132.3
IPR001584Integrase, catalytic corePFAMPF00665rvecoord: 294..392
e-value: 2.5E-11
score: 43.8
IPR001584Integrase, catalytic corePROSITEPS50994INTEGRASEcoord: 288..454
score: 22.898588
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 289..448
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 497..940
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 247..275

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh20G011630.1CmoCh20G011630.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding