CmoCh20G010730 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh20G010730
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Pentatricopeptide repeat-containing protein
Location	Cmo_Chr20: 9924630 .. 9928761 (+)
RNA-Seq Expression	CmoCh20G010730
Synteny	CmoCh20G010730

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTCAGAGCACTTCTCGTTTCTCTTTAATTCTCAGAAACTGTGCTCGTCTTAATGAAGTTGCTCAAGCAAAGCAAGCACACGCGCAAATCCTAATTCATGGTTTGATTCCACATTTAACTCTTGTGACAGATCTCCTTTTGGTGTATTGCAAATGTGGGGTTCTGCATGACGCCCGCAAGGTGTTTGACAAAATGACTCAGAGAAACATGCACTCCTGGAATATCTTGATTGCTTCTTATGTTCATAGTTCTTTACATTTTGATGCAATTAATGTGTTTAACGAGTTTAGGGGACTTGGTTTTCTGCCTGATCACTATACTTTGCCCCAGATGTTTAAGGTTAGTGTTGGTATAGGAGATGTTTATATGGGGAAGAGACTTCATTGTTGGACAATTAAGCTGGGGTTTGAAGGATATGTTGTGGTAGCCAGTACGGTTTTGGATTTCTATGCCAAATATGGGGTTGTGGGAGATGCTAAGAAGGTGTTTGATAATATGATTTTGAAAGATACAATTTCTTGGAACTCAATGATTTCTGGGTATGGGAGGGCTGGGCTTTATGGGGATGCATTGGATTGTTTCAAGCGCATGCTCTTTGAAGGAGTGAAGATGGATATCATGACAATTCCTAGCGTTTTGAATGCTTGTGGAGGGGAAGGAGATTTGAGAAAAGGCCAAGAAATTCATTGCTTAGTTTTGAAGAGTCAATTATTTGTTGCTGATGTTGCTATTGGGAACTCATTGATTGATATGTATGCAAAGTGTGGAAGCCTGTTTGATGCTGAAGAGGTCTTTAGGAATATGAGTAGCACGAATATTGTTACATGGACAACAATGATATCTTGTTATGGGGCTCATGGGAAAGGAGAGAAATCCTTGGCACTGTTTAACAAAATGAAGGATTGTGGAATCCAACCCAATTCTGTAACACTAACAGCCATTTTGGCTAGTTGCAGTCACGCAGGTTACATCAATGAAGGGTGGAGAATTTTCAAGTCTTTTGTTTCAGATTATGAGGTTGAACCGACGGTAGAACATTATGCTTGTGTTGTTGATCTTCTGAGTCGCTTTGGCTTTCTGCAGGAAGCGTTTATGTTGATAATAAATATGAAACACACAGCCGCAGCAAGCGTTTGGGGTGCTCTGCTTTCTGGTTGTATGATGCACAAGAACATTGAGATAGGAGAAATTGCAGCTAACCGGCTTTTCAAGTTGGAACCTAAGAATCCAAGCAATTTTATAGCCTTGATTGGTATATATGAATCTCTTGGAATGTCGCATGGCGTTTCGTTGACTAGAGGGAAGATGAGAGAGCTGGGTTTGACGAAACTCCCTGGTTGTAGCTGGATAACCATTGAAGGAGTTGTACATAAATTCTATGGAGGGGACAAGTCTCATCCTTTGGGGTTGAGAATATTTGAAACGTTGAGTGCAGTAAAACAAGCCAGTGTAAACTGTGAAACGACTTGAATTAACAGATCCTATTCAAGTAAGGTTGTAAACTGTGAAACGACTTGAAGTAAAGGAATAAAAGCTCAATGGTTATCACAAATTCTGCAGCAACCGGCCGGAACTCGAGTTGTTGGATGATTGGTTGATGTATCAATTGACAGTAACCACATTTTCTAGAGACCACTTGAAGGTGTGAGATACCATATCGGTTGGGAGGAGAATGAAATAATTTTATAAGGGTGTGGAAACTTCTCCCTAATAGACGCGTTTTAAAAACCTTGAGGGAGATGTTTTCATAGAGAGGACAATATCTGCTAACGGTGGGCTTGGATTGCTTGGACCGTTACAAATGGTATCATAGCCAGACACTGGACGATGTGCTAGCGATGAGGTTAAGTTCCGAAGGGAGTGGTCATGAGGCAGTGTGCCAGCAACGACACTAGGCCCTGAAGGGGGTGGATTGGGGTGTTCCACATCGATTGGAGAAAGGAATGAGTGCCAGCGAGGACGCTGAGCTCTGAAGGGGGGTGGATTGTGAGATCCCACATCAGTTAAGGAGAAGAACGAAATGTTCTTTATGAGGGTGTGGAAACCTCTCTCTAGTAGACGTGTTTTAAAAACCTTGAGGGAGAGGTTTTCATAGAGAGGACAATATCTGTTAACAGGGGGCTTGGGCCGTTACAAATGGTATCAGAGCTAGACACCAGGCGATGTGCTAGCGAGGAGGCTGAGCCCTGAAGGAGGTGGACATGAGGCGGTGTGCCAGCAAGAATGCTGGGATTGGAGAAGGGAATGAGTGCCAGTGAGGACGTTGTGGTTCAAAGGGGGTGGATTGTGAGATCCCACATCGGTTGGGGAGGAGAACGAAACATTCTTTGTAAGGGTGTGGAAGCTTTTCCTTAGTAGACGCGTTTTAAAAACTTTGAGGGAAAGATTTCCATAGAGAGGACAATATCTGCTAACGGTAGACTTTCTGTTACAGAAGGTTTCTTGATTGATTCAACATAGACGCCACTATGTTATATCTCCACACAACCTGTTGAGATTAGCAGTACAAGCGGTATTAAATCGAACCCAAGGTACGCATTTCAATCTTGTTGCAGCTGAGGTATTATTAAAAAATCTCAAGTACTGTCGATTAATATTACGAAATGCTCGTTCAATATTCATGGCTCTTTACTGACGATGAAAACTGTAGCTATTAGTTTTTTCATTACAGGACAAACACTACAAGAAATAAGCTTTTTCTTTGAATATTTCAGTCTCCTGCTAACTCTGAATCCCTTTCTCTTGCTTAAGTCTTCAACTTCAAAATCAGGTTCGAGTGCAGTTTAAAAGAAAAAATAATGTAATAGTGTAACCTTAGCAAGTTGAATCTAAGAACTTTCGAAAACACCCCGGATATGTAAACCCCAATATCCCAAATGCTAAAACTCTCGAATCAAGTTGATTTCATTCCAAATGATTGCAACTTTTAGGAATTTGATCTAACATGAAAAATAAGACTTTTAGATCTAAATATATCCAAGAATCTCAGAACAATAAGGAATCATTCCAAATAAGATTCGATCACCTTGTTGATCAAATATCTCAAGGCAAGAACGCTTATTTGAAATTCGAATCACTTCACAAGCAAGATAGATCAAGACAAGCTTGAATGACTCTAAGCATGTAATCTAAACTGCATAGAACTACAAAGAAATTTAGTCATTAACTTTTACTATATTGTTCAACATACATGGCTTTATATAGTCTCTTGAATGGCTTTCTTGAACACCTTTGACCTTTCATGAGGCATTTTAAGAGTTGTAACTTTCATGAGGCATTTTAAGAGTTGTAACTTTCATATTTTCTGATCATAAAAAATTCTAAAATGTATTAATGAAAATACCATCACTCTAGATTATCATCCACCCAAAATTTATGATAATTCAGAATAAATAAAGTTTGATTCTAATCTAATGTAGCTTGAATTGCAACTTAAATTTATCTCAGGGTAATTTGAACAATATTTTTGTCACATCTTTCTTAAAGTTCATATTACCTGATTGAAATGTCTTGGTTCATATTACAGGAGCGTGCAAGAGCATCTATATCTTCGACACCACGCCCATCATAAACACACCATGCACATCGTTAACCCACTTCAAACTCCGATACCAAGGTATTTGAGTTTGAGAAATTAGTTCAAAAGCCATCTATGCCAGCCAAATTATGTTTTGAGTTTGAGAAATTGTTTTGGCTAGGGACAGGGGGACTTGGATTTTCTTAGTTGGAAATTTGCTTCAACCCCAAGGTATTTCTTCAACTTCTTCAAGAACAAAAACTTACTTCTATCGATGATTCTGTTGCCAAAAACAAGTAGTCTCTTCTTCTTGCTTCTTGCCATTGTTCATCTGTTTAATCCATTAGATGTCAGGCTATTGCATGTTAGTTAGATTTGAAGTTTGAAAGTTTTTGGGATCTCTGTGGCACTTGGTTTGATGAACTTATGAGTAGAATTATCTGAAAAAATGGATCACAATGGCAAGCAGATAATAACTTGCAAGTCTTTGGTTGATGTCATTATAAAAACAAGTGATGAAAGTCATGTATTGTATAGAAGTTTGTGGTTGTAAACTTCCAATTGTTGATTGATTTTTTGTTTCTTGCGCTTTGTTATTTTAAACATCCAAAA

mRNA sequence

ATGTCTCAGAGCACTTCTCGTTTCTCTTTAATTCTCAGAAACTGTGCTCGTCTTAATGAAGTTGCTCAAGCAAAGCAAGCACACGCGCAAATCCTAATTCATGGTTTGATTCCACATTTAACTCTTGTGACAGATCTCCTTTTGGTGTATTGCAAATGTGGGGTTCTGCATGACGCCCGCAAGGTGTTTGACAAAATGACTCAGAGAAACATGCACTCCTGGAATATCTTGATTGCTTCTTATGTTCATAGTTCTTTACATTTTGATGCAATTAATGTGTTTAACGAGTTTAGGGGACTTGGTTTTCTGCCTGATCACTATACTTTGCCCCAGATGTTTAAGGTTAGTGTTGGTATAGGAGATGTTTATATGGGGAAGAGACTTCATTGTTGGACAATTAAGCTGGGGTTTGAAGGATATGTTGTGGTAGCCAGTACGGTTTTGGATTTCTATGCCAAATATGGGGTTGTGGGAGATGCTAAGAAGGTGTTTGATAATATGATTTTGAAAGATACAATTTCTTGGAACTCAATGATTTCTGGGTATGGGAGGGCTGGGCTTTATGGGGATGCATTGGATTGTTTCAAGCGCATGCTCTTTGAAGGAGTGAAGATGGATATCATGACAATTCCTAGCGTTTTGAATGCTTGTGGAGGGGAAGGAGATTTGAGAAAAGGCCAAGAAATTCATTGCTTAGTTTTGAAGAGTCAATTATTTGTTGCTGATGTTGCTATTGGGAACTCATTGATTGATATGTATGCAAAGTGTGGAAGCCTGTTTGATGCTGAAGAGGTCTTTAGGAATATGAGTAGCACGAATATTGTTACATGGACAACAATGATATCTTGTTATGGGGCTCATGGGAAAGGAGAGAAATCCTTGGCACTGTTTAACAAAATGAAGGATTGTGGAATCCAACCCAATTCTGTAACACTAACAGCCATTTTGGCTAGTTGCAGTCACGCAGGTTACATCAATGAAGGGTGGAGAATTTTCAAGTCTTTTGTTTCAGATTATGAGGTTGAACCGACGGTAGAACATTATGCTTGTGTTGTTGATCTTCTGAGTCGCTTTGGCTTTCTGCAGGAAGCGTTTATGTTGATAATAAATATGAAACACACAGCCGCAGCAAGCGTTTGGGGTGCTCTGCTTTCTGGTTGTATGATGCACAAGAACATTGAGATAGGAGAAATTGCAGCTAACCGGCTTTTCAAGTTGGAACCTAAGAATCCAAGCAATTTTATAGCCTTGATTGGTATATATGAATCTCTTGGAATGTCGCATGGCGTTTCGTTGACTAGAGGGAAGATGAGAGAGCTGGGTTTGACGAAACTCCCTGGTTGTAGCTGGATAACCATTGAAGGAGTTGTACATAAATTCTATGGAGGGGACAAGTCTCATCCTTTGGGGTTGAGAATATTTGAAACGTTGAGTGCAGTAAAACAAGCCAGTACGCCACTATGTTATATCTCCACACAACCTGTTGAGATTAGCAGTACAAGCGGTATTAAATCGAACCCAAGGAGCGTGCAAGAGCATCTATATCTTCGACACCACGCCCATCATAAACACACCATGCACATCGTTAACCCACTTCAAACTCCGATACCAAGGGACAGGGGGACTTGGATTTTCTTAGTTGGAAATTTGCTTCAACCCCAAGGTATTTCTTCAACTTCTTCAAGAACAAAAACTTACTTCTATCGATGATTCTGTTGCCAAAAACAAGTAGTCTCTTCTTCTTGCTTCTTGCCATTGTTCATCTGTTTAATCCATTAGATGTCAGGCTATTGCATGTTAGTTAGATTTGAAGTTTGAAAGTTTTTGGGATCTCTGTGGCACTTGGTTTGATGAACTTATGAGTAGAATTATCTGAAAAAATGGATCACAATGGCAAGCAGATAATAACTTGCAAGTCTTTGGTTGATGTCATTATAAAAACAAGTGATGAAAGTCATGTATTGTATAGAAGTTTGTGGTTGTAAACTTCCAATTGTTGATTGATTTTTTGTTTCTTGCGCTTTGTTATTTTAAACATCCAAAA

Coding sequence (CDS)

ATGTCTCAGAGCACTTCTCGTTTCTCTTTAATTCTCAGAAACTGTGCTCGTCTTAATGAAGTTGCTCAAGCAAAGCAAGCACACGCGCAAATCCTAATTCATGGTTTGATTCCACATTTAACTCTTGTGACAGATCTCCTTTTGGTGTATTGCAAATGTGGGGTTCTGCATGACGCCCGCAAGGTGTTTGACAAAATGACTCAGAGAAACATGCACTCCTGGAATATCTTGATTGCTTCTTATGTTCATAGTTCTTTACATTTTGATGCAATTAATGTGTTTAACGAGTTTAGGGGACTTGGTTTTCTGCCTGATCACTATACTTTGCCCCAGATGTTTAAGGTTAGTGTTGGTATAGGAGATGTTTATATGGGGAAGAGACTTCATTGTTGGACAATTAAGCTGGGGTTTGAAGGATATGTTGTGGTAGCCAGTACGGTTTTGGATTTCTATGCCAAATATGGGGTTGTGGGAGATGCTAAGAAGGTGTTTGATAATATGATTTTGAAAGATACAATTTCTTGGAACTCAATGATTTCTGGGTATGGGAGGGCTGGGCTTTATGGGGATGCATTGGATTGTTTCAAGCGCATGCTCTTTGAAGGAGTGAAGATGGATATCATGACAATTCCTAGCGTTTTGAATGCTTGTGGAGGGGAAGGAGATTTGAGAAAAGGCCAAGAAATTCATTGCTTAGTTTTGAAGAGTCAATTATTTGTTGCTGATGTTGCTATTGGGAACTCATTGATTGATATGTATGCAAAGTGTGGAAGCCTGTTTGATGCTGAAGAGGTCTTTAGGAATATGAGTAGCACGAATATTGTTACATGGACAACAATGATATCTTGTTATGGGGCTCATGGGAAAGGAGAGAAATCCTTGGCACTGTTTAACAAAATGAAGGATTGTGGAATCCAACCCAATTCTGTAACACTAACAGCCATTTTGGCTAGTTGCAGTCACGCAGGTTACATCAATGAAGGGTGGAGAATTTTCAAGTCTTTTGTTTCAGATTATGAGGTTGAACCGACGGTAGAACATTATGCTTGTGTTGTTGATCTTCTGAGTCGCTTTGGCTTTCTGCAGGAAGCGTTTATGTTGATAATAAATATGAAACACACAGCCGCAGCAAGCGTTTGGGGTGCTCTGCTTTCTGGTTGTATGATGCACAAGAACATTGAGATAGGAGAAATTGCAGCTAACCGGCTTTTCAAGTTGGAACCTAAGAATCCAAGCAATTTTATAGCCTTGATTGGTATATATGAATCTCTTGGAATGTCGCATGGCGTTTCGTTGACTAGAGGGAAGATGAGAGAGCTGGGTTTGACGAAACTCCCTGGTTGTAGCTGGATAACCATTGAAGGAGTTGTACATAAATTCTATGGAGGGGACAAGTCTCATCCTTTGGGGTTGAGAATATTTGAAACGTTGAGTGCAGTAAAACAAGCCAGTACGCCACTATGTTATATCTCCACACAACCTGTTGAGATTAGCAGTACAAGCGGTATTAAATCGAACCCAAGGAGCGTGCAAGAGCATCTATATCTTCGACACCACGCCCATCATAAACACACCATGCACATCGTTAACCCACTTCAAACTCCGATACCAAGGGACAGGGGGACTTGGATTTTCTTAGTTGGAAATTTGCTTCAACCCCAAGGTATTTCTTCAACTTCTTCAAGAACAAAAACTTACTTCTATCGATGA

Protein sequence

MSQSTSRFSLILRNCARLNEVAQAKQAHAQILIHGLIPHLTLVTDLLLVYCKCGVLHDARKVFDKMTQRNMHSWNILIASYVHSSLHFDAINVFNEFRGLGFLPDHYTLPQMFKVSVGIGDVYMGKRLHCWTIKLGFEGYVVVASTVLDFYAKYGVVGDAKKVFDNMILKDTISWNSMISGYGRAGLYGDALDCFKRMLFEGVKMDIMTIPSVLNACGGEGDLRKGQEIHCLVLKSQLFVADVAIGNSLIDMYAKCGSLFDAEEVFRNMSSTNIVTWTTMISCYGAHGKGEKSLALFNKMKDCGIQPNSVTLTAILASCSHAGYINEGWRIFKSFVSDYEVEPTVEHYACVVDLLSRFGFLQEAFMLIINMKHTAAASVWGALLSGCMMHKNIEIGEIAANRLFKLEPKNPSNFIALIGIYESLGMSHGVSLTRGKMRELGLTKLPGCSWITIEGVVHKFYGGDKSHPLGLRIFETLSAVKQASTPLCYISTQPVEISSTSGIKSNPRSVQEHLYLRHHAHHKHTMHIVNPLQTPIPRDRGTWIFLVGNLLQPQGISSTSSRTKTYFYR

Homology

[Close]

BLAST of CmoCh20G010730 vs. ExPASy Swiss-Prot
Match: Q9LIQ7 (Pentatricopeptide repeat-containing protein At3g24000, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H87 PE=3 SV=1)

HSP 1 Score: 340.1 bits (871), Expect = 4.8e-92
Identity = 165/461 (35.79%), Postives = 263/461 (57.05%), Query Frame = 0


Query: 8   FSLILRNCARLNEVAQAKQAHAQILIHGLIPHLTLVTDLLLVYCKCGVLHDARKVFDKMT 67
           ++ +L+ C     + Q +  HA IL       + +   LL +Y KCG L +ARKVF+KM 
Sbjct: 63  YNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMP 122

Query: 68  QRNMHSWNILIASYVHSSLHFDAINVFNEFRGLGFLPDHYTLPQMFKVSVGIGDVYMGKR 127
           QR+  +W  LI+ Y       DA+  FN+    G+ P+ +TL  + K +        G +
Sbjct: 123 QRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQ 182

Query: 128 LHCWTIKLGFEGYVVVASTVLDFYAKYGVVGDAKKVFDNMILKDTISWNSMISGYGRAGL 187
           LH + +K GF+  V V S +LD Y +YG++ DA+ VFD +  ++ +SWN++I+G+ R   
Sbjct: 183 LHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSG 242

Query: 188 YGDALDCFKRMLFEGVKMDIMTIPSVLNACGGEGDLRKGQEIHCLVLKSQLFVADVAIGN 247
              AL+ F+ ML +G +    +  S+  AC   G L +G+ +H  ++KS   +   A GN
Sbjct: 243 TEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFA-GN 302

Query: 248 SLIDMYAKCGSLFDAEEVFRNMSSTNIVTWTTMISCYGAHGKGEKSLALFNKMKDCGIQP 307
           +L+DMYAK GS+ DA ++F  ++  ++V+W ++++ Y  HG G++++  F +M+  GI+P
Sbjct: 303 TLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRP 362

Query: 308 NSVTLTAILASCSHAGYINEGWRIFKSFVSDYEVEPTVEHYACVVDLLSRFGFLQEAFML 367
           N ++  ++L +CSH+G ++EGW  ++    D  + P   HY  VVDLL R G L  A   
Sbjct: 363 NEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRF 422

Query: 368 IINMKHTAAASVWGALLSGCMMHKNIEIGEIAANRLFKLEPKNPSNFIALIGIYESLGMS 427
           I  M     A++W ALL+ C MHKN E+G  AA  +F+L+P +P   + L  IY S G  
Sbjct: 423 IEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRW 482

Query: 428 HGVSLTRGKMRELGLTKLPGCSWITIEGVVHKFYGGDKSHP 469
           +  +  R KM+E G+ K P CSW+ IE  +H F   D+ HP
Sbjct: 483 NDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHP 521

[Close]

BLAST of CmoCh20G010730 vs. ExPASy Swiss-Prot
Match: Q9LW32 (Pentatricopeptide repeat-containing protein At3g26782, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H34 PE=2 SV=1)

HSP 1 Score: 338.2 bits (866), Expect = 1.8e-91
Identity = 190/528 (35.98%), Postives = 298/528 (56.44%), Query Frame = 0


Query: 6   SRFSLILRNCARLNEVAQAKQAHAQILIHGLIPHLTLVTDLLLVYCKCGVLHDARKVFDK 65
           S F   ++ C+ L ++   KQ H Q  + G    + + + L+++Y  CG L DARKVFD+
Sbjct: 77  SSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDE 136

Query: 66  MTQRNMHSWNILIASYVHSSLHFDAINVFNEFRGLGFLPDHYTLPQMFKVSVGIGDVY-- 125
           + +RN+ SW  +I  Y  +    DA+++F +      + ++     MF  S+G+  V   
Sbjct: 137 IPKRNIVSWTSMIRGYDLNGNALDAVSLFKDL----LVDENDDDDAMFLDSMGLVSVISA 196

Query: 126 --------MGKRLHCWTIKLGFEGYVVVASTVLDFYAK--YGVVGDAKKVFDNMILKDTI 185
                   + + +H + IK GF+  V V +T+LD YAK   G V  A+K+FD ++ KD +
Sbjct: 197 CSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRV 256

Query: 186 SWNSMISGYGRAGLYGDALDCFKRML-FEGVKMDIMTIPSVLNACGGEGDLRKGQEIHCL 245
           S+NS++S Y ++G+  +A + F+R++  + V  + +T+ +VL A    G LR G+ IH  
Sbjct: 257 SYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQ 316

Query: 246 VLKSQLFVADVAIGNSLIDMYAKCGSLFDAEEVFRNMSSTNIVTWTTMISCYGAHGKGEK 305
           V++  L   DV +G S+IDMY KCG +  A + F  M + N+ +WT MI+ YG HG   K
Sbjct: 317 VIRMGL-EDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAK 376

Query: 306 SLALFNKMKDCGIQPNSVTLTAILASCSHAGYINEGWRIFKSFVSDYEVEPTVEHYACVV 365
           +L LF  M D G++PN +T  ++LA+CSHAG   EGWR F +    + VEP +EHY C+V
Sbjct: 377 ALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMV 436

Query: 366 DLLSRFGFLQEAFMLIINMKHTAAASVWGALLSGCMMHKNIEIGEIAANRLFKLEPKNPS 425
           DLL R GFLQ+A+ LI  MK    + +W +LL+ C +HKN+E+ EI+  RLF+L+  N  
Sbjct: 437 DLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCG 496

Query: 426 NFIALIGIYESLGMSHGVSLTRGKMRELGLTKLPGCSWITIEGVVHKFYGGDKSHPLGLR 485
            ++ L  IY   G    V   R  M+  GL K PG S + + G VH F  GD+ HP   +
Sbjct: 497 YYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREK 556

Query: 486 IFETLSAVKQASTPLCYISTQPVEISSTSGIKSNPRSVQEHLYLRHHA 521
           I+E L+ + +      Y       +S+TS +  +    ++ + LR H+
Sbjct: 557 IYEFLAELNRKLLEAGY-------VSNTSSVCHDVDEEEKEMTLRVHS 592

[Close]

BLAST of CmoCh20G010730 vs. ExPASy Swiss-Prot
Match: Q9LZ19 (Pentatricopeptide repeat-containing protein At5g04780, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H16 PE=2 SV=2)

HSP 1 Score: 336.7 bits (862), Expect = 5.3e-91
Identity = 168/467 (35.97%), Postives = 276/467 (59.10%), Query Frame = 0


Query: 11  ILRNCARLNEVAQAKQAHAQILIHGLIPHLTLVTDLLLVYCKCGVLHDARKVFDKMTQRN 70
           IL+ CAR   V +AK  H +I+   L   +TL+  L+  Y KCG +  AR+VFD M +R+
Sbjct: 67  ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 126

Query: 71  MHSWNILIASYVHSSLHFDAINVFNEFRGLGFLPDHYTLPQMFKVSVGIGDVYMGKRLHC 130
           + SWN +I  Y  + +  +A+++F E R  GF    +T+  +        D    K+LHC
Sbjct: 127 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHC 186

Query: 131 WTIKLGFEGYVVVASTVLDFYAKYGVVGDAKKVFDNMILKDTISWNSMISGYGRAGLYGD 190
            ++K   +  + V + +LD YAK G++ DA +VF++M  K +++W+SM++GY +   Y +
Sbjct: 187 LSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEE 246

Query: 191 ALDCFKRMLFEGVKMDIMTIPSVLNACGGEGDLRKGQEIHCLVLKSQLFVADVAIGNSLI 250
           AL  ++R     ++ +  T+ SV+ AC     L +G+++H ++ KS  F ++V + +S +
Sbjct: 247 ALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSG-FGSNVFVASSAV 306

Query: 251 DMYAKCGSLFDAEEVFRNMSSTNIVTWTTMISCYGAHGKGEKSLALFNKMKDCGIQPNSV 310
           DMYAKCGSL ++  +F  +   N+  W T+IS +  H + ++ + LF KM+  G+ PN V
Sbjct: 307 DMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEV 366

Query: 311 TLTAILASCSHAGYINEGWRIFKSFVSDYEVEPTVEHYACVVDLLSRFGFLQEAFMLIIN 370
           T +++L+ C H G + EG R FK   + Y + P V HY+C+VD+L R G L EA+ LI +
Sbjct: 367 TFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKS 426

Query: 371 MKHTAAASVWGALLSGCMMHKNIEIGEIAANRLFKLEPKNPSNFIALIGIYESLGMSHGV 430
           +     AS+WG+LL+ C ++KN+E+ E+AA +LF+LEP+N  N + L  IY +      +
Sbjct: 427 IPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEI 486

Query: 431 SLTRGKMRELGLTKLPGCSWITIEGVVHKFYGGDKSHPLGLRIFETL 478
           + +R  +R+  + K+ G SWI I+  VH F  G+  HP    I  TL
Sbjct: 487 AKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTL 532

[Close]

BLAST of CmoCh20G010730 vs. ExPASy Swiss-Prot
Match: Q9SN39 (Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DOT4 PE=2 SV=1)

HSP 1 Score: 332.8 bits (852), Expect = 7.6e-90
Identity = 167/426 (39.20%), Postives = 260/426 (61.03%), Query Frame = 0


Query: 46  LLLVYCKCGVLHDARKVFDKMTQRNMHSWNILIASYVHSSLHFDAINVFNEFRGLGFLPD 105
           LL +Y KCG L  A+ VF +M+ R++ S+  +IA Y    L  +A+ +F E    G  PD
Sbjct: 337 LLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPD 396

Query: 106 HYTLPQMFKVSVGIGDVYMGKRLHCWTIK--LGFEGYVVVASTVLDFYAKYGVVGDAKKV 165
            YT+  +         +  GKR+H W  +  LGF+  + V++ ++D YAK G + +A+ V
Sbjct: 397 VYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFD--IFVSNALMDMYAKCGSMQEAELV 456

Query: 166 FDNMILKDTISWNSMISGYGRAGLYGDALDCFKRMLFE-GVKMDIMTIPSVLNACGGEGD 225
           F  M +KD ISWN++I GY +     +AL  F  +L E     D  T+  VL AC     
Sbjct: 457 FSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSA 516

Query: 226 LRKGQEIHCLVLKSQLFVADVAIGNSLIDMYAKCGSLFDAEEVFRNMSSTNIVTWTTMIS 285
             KG+EIH  ++++  F +D  + NSL+DMYAKCG+L  A  +F +++S ++V+WT MI+
Sbjct: 517 FDKGREIHGYIMRNGYF-SDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIA 576

Query: 286 CYGAHGKGEKSLALFNKMKDCGIQPNSVTLTAILASCSHAGYINEGWRIFKSFVSDYEVE 345
            YG HG G++++ALFN+M+  GI+ + ++  ++L +CSH+G ++EGWR F     + ++E
Sbjct: 577 GYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIE 636

Query: 346 PTVEHYACVVDLLSRFGFLQEAFMLIINMKHTAAASVWGALLSGCMMHKNIEIGEIAANR 405
           PTVEHYAC+VD+L+R G L +A+  I NM     A++WGALL GC +H ++++ E  A +
Sbjct: 637 PTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEK 696

Query: 406 LFKLEPKNPSNFIALIGIYESLGMSHGVSLTRGKMRELGLTKLPGCSWITIEGVVHKFYG 465
           +F+LEP+N   ++ +  IY        V   R ++ + GL K PGCSWI I+G V+ F  
Sbjct: 697 VFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVA 756

Query: 466 GDKSHP 469
           GD S+P
Sbjct: 757 GDSSNP 759

[Close]

BLAST of CmoCh20G010730 vs. ExPASy Swiss-Prot
Match: Q9M1V3 (Pentatricopeptide repeat-containing protein At3g63370, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H83 PE=2 SV=2)

HSP 1 Score: 325.5 bits (833), Expect = 1.2e-87
Identity = 166/470 (35.32%), Postives = 262/470 (55.74%), Query Frame = 0


Query: 11  ILRNCARLNEVAQAKQAHAQILIHGLIPHLTLVTDLLLVYCKCGVLHDARKVFDKMTQRN 70
           I+    RL+ +    + HA ++ HG   +L +   L+ +Y KC +     + F +M  ++
Sbjct: 392 IIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKD 451

Query: 71  MHSWNILIASYVHSSLHFDAINVFNEFRGLGFLPDHYTLPQMFKVSVGIGDVYMGKRLHC 130
           + SW  +IA Y  +  H +A+ +F +        D   L  + + S  +  + + K +HC
Sbjct: 452 LISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHC 511

Query: 131 WTIKLGFEGYVVVASTVLDFYAKYGVVGDAKKVFDNMILKDTISWNSMISGYGRAGLYGD 190
             ++ G     V+ + ++D Y K   +G A +VF+++  KD +SW SMIS     G   +
Sbjct: 512 HILRKGLLD-TVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESE 571

Query: 191 ALDCFKRMLFEGVKMDIMTIPSVLNACGGEGDLRKGQEIHCLVLKSQLFVADVAIGNSLI 250
           A++ F+RM+  G+  D + +  +L+A      L KG+EIHC +L+   F  + +I  +++
Sbjct: 572 AVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKG-FCLEGSIAVAVV 631

Query: 251 DMYAKCGSLFDAEEVFRNMSSTNIVTWTTMISCYGAHGKGEKSLALFNKMKDCGIQPNSV 310
           DMYA CG L  A+ VF  +    ++ +T+MI+ YG HG G+ ++ LF+KM+   + P+ +
Sbjct: 632 DMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHI 691

Query: 311 TLTAILASCSHAGYINEGWRIFKSFVSDYEVEPTVEHYACVVDLLSRFGFLQEAFMLIIN 370
           +  A+L +CSHAG ++EG    K    +YE+EP  EHY C+VD+L R   + EAF  +  
Sbjct: 692 SFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKM 751

Query: 371 MKHTAAASVWGALLSGCMMHKNIEIGEIAANRLFKLEPKNPSNFIALIGIYESLGMSHGV 430
           MK    A VW ALL+ C  H   EIGEIAA RL +LEPKNP N + +  ++   G  + V
Sbjct: 752 MKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDV 811

Query: 431 SLTRGKMRELGLTKLPGCSWITIEGVVHKFYGGDKSHPLGLRIFETLSAV 481
              R KM+  G+ K PGCSWI ++G VHKF   DKSHP    I+E LS V
Sbjct: 812 EKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEV 859

[Close]

BLAST of CmoCh20G010730 vs. ExPASy TrEMBL
Match: A0A6J1EV55 (pentatricopeptide repeat-containing protein At3g24000, mitochondrial-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111438329 PE=4 SV=1)

HSP 1 Score: 996.1 bits (2574), Expect = 5.9e-287
Identity = 485/488 (99.39%), Postives = 485/488 (99.39%), Query Frame = 0


Query: 1   MSQSTSRFSLILRNCARLNEVAQAKQAHAQILIHGLIPHLTLVTDLLLVYCKCGVLHDAR 60
           MSQSTSRFSLILRNCARLNEVAQAKQAHAQILIHGLIPHLTLVTDLLLVYCKCGVLHDAR
Sbjct: 1   MSQSTSRFSLILRNCARLNEVAQAKQAHAQILIHGLIPHLTLVTDLLLVYCKCGVLHDAR 60

Query: 61  KVFDKMTQRNMHSWNILIASYVHSSLHFDAINVFNEFRGLGFLPDHYTLPQMFKVSVGIG 120
           KVFDKMTQRNMHSWNILIASYVHSSLHFDAINVFNEFRGLGFLPDHYTLPQMFKVSVGIG
Sbjct: 61  KVFDKMTQRNMHSWNILIASYVHSSLHFDAINVFNEFRGLGFLPDHYTLPQMFKVSVGIG 120

Query: 121 DVYMGKRLHCWTIKLGFEGYVVVASTVLDFYAKYGVVGDAKKVFDNMILKDTISWNSMIS 180
           DVYMGKRLHCWTIKLGFEGYVVVASTVLDFYAKYGVVGDAKKVFDNMILKDTISWNSMIS
Sbjct: 121 DVYMGKRLHCWTIKLGFEGYVVVASTVLDFYAKYGVVGDAKKVFDNMILKDTISWNSMIS 180

Query: 181 GYGRAGLYGDALDCFKRMLFEGVKMDIMTIPSVLNACGGEGDLRKGQEIHCLVLKSQLFV 240
           GYGRAGLYGDALDCFKRMLFEGVKMDIMTIPSVLNACGGEGDLRKGQEIHCLVLKSQLFV
Sbjct: 181 GYGRAGLYGDALDCFKRMLFEGVKMDIMTIPSVLNACGGEGDLRKGQEIHCLVLKSQLFV 240

Query: 241 ADVAIGNSLIDMYAKCGSLFDAEEVFRNMSSTNIVTWTTMISCYGAHGKGEKSLALFNKM 300
           ADVAIGNSLIDMYAKCGSLFDAEEVFRNMSSTNIVTWTTMISCYGAHGKGEKSLALFNKM
Sbjct: 241 ADVAIGNSLIDMYAKCGSLFDAEEVFRNMSSTNIVTWTTMISCYGAHGKGEKSLALFNKM 300

Query: 301 KDCGIQPNSVTLTAILASCSHAGYINEGWRIFKSFVSDYEVEPTVEHYACVVDLLSRFGF 360
           KDCGIQPNSVTLTAILASCSHAGYINEGWRIFKSFVSDYEVEPTVEHYACVVDLLSRFGF
Sbjct: 301 KDCGIQPNSVTLTAILASCSHAGYINEGWRIFKSFVSDYEVEPTVEHYACVVDLLSRFGF 360

Query: 361 LQEAFMLIINMKHTAAASVWGALLSGCMMHKNIEIGEIAANRLFKLEPKNPSNFIALIGI 420
           LQEAFMLIINMKHTAAASVWGALLSGCMMHKNIEIGEIAANRLFKLEPKNPSNFIALIGI
Sbjct: 361 LQEAFMLIINMKHTAAASVWGALLSGCMMHKNIEIGEIAANRLFKLEPKNPSNFIALIGI 420

Query: 421 YESLGMSHGVSLTRGKMRELGLTKLPGCSWITIEGVVHKFYGGDKSHPLGLRIFETLSAV 480
           YESLGMSHGVSLTRGKMRELGLTKLPGCSWITIEGVVHKFYGGDKSHPLGLRIFETLSAV
Sbjct: 421 YESLGMSHGVSLTRGKMRELGLTKLPGCSWITIEGVVHKFYGGDKSHPLGLRIFETLSAV 480

Query: 481 KQASTPLC 489
           KQAS   C
Sbjct: 481 KQASVNCC 488

[Close]

BLAST of CmoCh20G010730 vs. ExPASy TrEMBL
Match: A0A6J1F0Z8 (pentatricopeptide repeat-containing protein At3g24000, mitochondrial-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111438329 PE=4 SV=1)

HSP 1 Score: 994.2 bits (2569), Expect = 2.2e-286
Identity = 484/484 (100.00%), Postives = 484/484 (100.00%), Query Frame = 0


Query: 1   MSQSTSRFSLILRNCARLNEVAQAKQAHAQILIHGLIPHLTLVTDLLLVYCKCGVLHDAR 60
           MSQSTSRFSLILRNCARLNEVAQAKQAHAQILIHGLIPHLTLVTDLLLVYCKCGVLHDAR
Sbjct: 1   MSQSTSRFSLILRNCARLNEVAQAKQAHAQILIHGLIPHLTLVTDLLLVYCKCGVLHDAR 60

Query: 61  KVFDKMTQRNMHSWNILIASYVHSSLHFDAINVFNEFRGLGFLPDHYTLPQMFKVSVGIG 120
           KVFDKMTQRNMHSWNILIASYVHSSLHFDAINVFNEFRGLGFLPDHYTLPQMFKVSVGIG
Sbjct: 61  KVFDKMTQRNMHSWNILIASYVHSSLHFDAINVFNEFRGLGFLPDHYTLPQMFKVSVGIG 120

Query: 121 DVYMGKRLHCWTIKLGFEGYVVVASTVLDFYAKYGVVGDAKKVFDNMILKDTISWNSMIS 180
           DVYMGKRLHCWTIKLGFEGYVVVASTVLDFYAKYGVVGDAKKVFDNMILKDTISWNSMIS
Sbjct: 121 DVYMGKRLHCWTIKLGFEGYVVVASTVLDFYAKYGVVGDAKKVFDNMILKDTISWNSMIS 180

Query: 181 GYGRAGLYGDALDCFKRMLFEGVKMDIMTIPSVLNACGGEGDLRKGQEIHCLVLKSQLFV 240
           GYGRAGLYGDALDCFKRMLFEGVKMDIMTIPSVLNACGGEGDLRKGQEIHCLVLKSQLFV
Sbjct: 181 GYGRAGLYGDALDCFKRMLFEGVKMDIMTIPSVLNACGGEGDLRKGQEIHCLVLKSQLFV 240

Query: 241 ADVAIGNSLIDMYAKCGSLFDAEEVFRNMSSTNIVTWTTMISCYGAHGKGEKSLALFNKM 300
           ADVAIGNSLIDMYAKCGSLFDAEEVFRNMSSTNIVTWTTMISCYGAHGKGEKSLALFNKM
Sbjct: 241 ADVAIGNSLIDMYAKCGSLFDAEEVFRNMSSTNIVTWTTMISCYGAHGKGEKSLALFNKM 300

Query: 301 KDCGIQPNSVTLTAILASCSHAGYINEGWRIFKSFVSDYEVEPTVEHYACVVDLLSRFGF 360
           KDCGIQPNSVTLTAILASCSHAGYINEGWRIFKSFVSDYEVEPTVEHYACVVDLLSRFGF
Sbjct: 301 KDCGIQPNSVTLTAILASCSHAGYINEGWRIFKSFVSDYEVEPTVEHYACVVDLLSRFGF 360

Query: 361 LQEAFMLIINMKHTAAASVWGALLSGCMMHKNIEIGEIAANRLFKLEPKNPSNFIALIGI 420
           LQEAFMLIINMKHTAAASVWGALLSGCMMHKNIEIGEIAANRLFKLEPKNPSNFIALIGI
Sbjct: 361 LQEAFMLIINMKHTAAASVWGALLSGCMMHKNIEIGEIAANRLFKLEPKNPSNFIALIGI 420

Query: 421 YESLGMSHGVSLTRGKMRELGLTKLPGCSWITIEGVVHKFYGGDKSHPLGLRIFETLSAV 480
           YESLGMSHGVSLTRGKMRELGLTKLPGCSWITIEGVVHKFYGGDKSHPLGLRIFETLSAV
Sbjct: 421 YESLGMSHGVSLTRGKMRELGLTKLPGCSWITIEGVVHKFYGGDKSHPLGLRIFETLSAV 480

Query: 481 KQAS 485
           KQAS
Sbjct: 481 KQAS 484

[Close]

BLAST of CmoCh20G010730 vs. ExPASy TrEMBL
Match: A0A6J1I2G9 (pentatricopeptide repeat-containing protein At5g04780, mitochondrial-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111470305 PE=4 SV=1)

HSP 1 Score: 943.3 bits (2437), Expect = 4.6e-271
Identity = 458/484 (94.63%), Postives = 469/484 (96.90%), Query Frame = 0


Query: 1   MSQSTSRFSLILRNCARLNEVAQAKQAHAQILIHGLIPHLTLVTDLLLVYCKCGVLHDAR 60
           MSQSTSRFS ILRNCARLN VAQAKQAHAQI+IHGLIPHLTLVTD+LLVYCKCG++HDAR
Sbjct: 1   MSQSTSRFSFILRNCARLNAVAQAKQAHAQIVIHGLIPHLTLVTDILLVYCKCGLVHDAR 60

Query: 61  KVFDKMTQRNMHSWNILIASYVHSSLHFDAINVFNEFRGLGFLPDHYTLPQMFKVSVGIG 120
           KVFDKMT RNMHSWNILIASYVHSSLHFDAINV NEFRGLGFLPDHYTLPQMFKVSVGIG
Sbjct: 61  KVFDKMTHRNMHSWNILIASYVHSSLHFDAINVLNEFRGLGFLPDHYTLPQMFKVSVGIG 120

Query: 121 DVYMGKRLHCWTIKLGFEGYVVVASTVLDFYAKYGVVGDAKKVFDNMILKDTISWNSMIS 180
           DVYMGKRLHCWTIKLGFEGYVVVASTVLDFYAKYGVVGDAKKVFDNMILKDTISWNSMIS
Sbjct: 121 DVYMGKRLHCWTIKLGFEGYVVVASTVLDFYAKYGVVGDAKKVFDNMILKDTISWNSMIS 180

Query: 181 GYGRAGLYGDALDCFKRMLFEGVKMDIMTIPSVLNACGGEGDLRKGQEIHCLVLKSQLFV 240
           GYGRAGLYGDALDCFKRMLFEGVKMDIMTIPSVLNACGGEGDLRKG+EIHCLVLKSQLFV
Sbjct: 181 GYGRAGLYGDALDCFKRMLFEGVKMDIMTIPSVLNACGGEGDLRKGKEIHCLVLKSQLFV 240

Query: 241 ADVAIGNSLIDMYAKCGSLFDAEEVFRNMSSTNIVTWTTMISCYGAHGKGEKSLALFNKM 300
           ADVAIGNSLIDMYAKCGSLFDAE VFRNMSS NIVTWTTMISCYGAHGKGEKSLALFNKM
Sbjct: 241 ADVAIGNSLIDMYAKCGSLFDAENVFRNMSSVNIVTWTTMISCYGAHGKGEKSLALFNKM 300

Query: 301 KDCGIQPNSVTLTAILASCSHAGYINEGWRIFKSFVSDYEVEPTVEHYACVVDLLSRFGF 360
           KDCGIQPNSVTLTAILASCSHAGYI+EGWRIF S VSDYEVE TVEHYACVVDLLSRFGF
Sbjct: 301 KDCGIQPNSVTLTAILASCSHAGYISEGWRIFNSIVSDYEVELTVEHYACVVDLLSRFGF 360

Query: 361 LQEAFMLIINMKHTAAASVWGALLSGCMMHKNIEIGEIAANRLFKLEPKNPSNFIALIGI 420
           LQEAFMLI +MKHTAAAS+WGALLSGCMMHKN+EIGEIAAN+LFKLEP NPSNFIALIGI
Sbjct: 361 LQEAFMLIRSMKHTAAASIWGALLSGCMMHKNLEIGEIAANQLFKLEPTNPSNFIALIGI 420

Query: 421 YESLGMSHGVSLTRGKMRELGLTKLPGCSWITIEGVVHKFYGGDKSHPLGLRIFETLSAV 480
           YESLGM   VSLTR KMR+LGLTKLPGCSWITIEGVVHKFYGGDKSHPLGLRIFETLSAV
Sbjct: 421 YESLGMLDCVSLTREKMRDLGLTKLPGCSWITIEGVVHKFYGGDKSHPLGLRIFETLSAV 480

Query: 481 KQAS 485
           KQAS
Sbjct: 481 KQAS 484

[Close]

BLAST of CmoCh20G010730 vs. ExPASy TrEMBL
Match: A0A6J1EVE9 (pentatricopeptide repeat-containing protein At5g56310-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111438329 PE=4 SV=1)

HSP 1 Score: 868.2 bits (2242), Expect = 1.9e-248
Identity = 419/419 (100.00%), Postives = 419/419 (100.00%), Query Frame = 0


Query: 66  MTQRNMHSWNILIASYVHSSLHFDAINVFNEFRGLGFLPDHYTLPQMFKVSVGIGDVYMG 125
           MTQRNMHSWNILIASYVHSSLHFDAINVFNEFRGLGFLPDHYTLPQMFKVSVGIGDVYMG
Sbjct: 1   MTQRNMHSWNILIASYVHSSLHFDAINVFNEFRGLGFLPDHYTLPQMFKVSVGIGDVYMG 60

Query: 126 KRLHCWTIKLGFEGYVVVASTVLDFYAKYGVVGDAKKVFDNMILKDTISWNSMISGYGRA 185
           KRLHCWTIKLGFEGYVVVASTVLDFYAKYGVVGDAKKVFDNMILKDTISWNSMISGYGRA
Sbjct: 61  KRLHCWTIKLGFEGYVVVASTVLDFYAKYGVVGDAKKVFDNMILKDTISWNSMISGYGRA 120

Query: 186 GLYGDALDCFKRMLFEGVKMDIMTIPSVLNACGGEGDLRKGQEIHCLVLKSQLFVADVAI 245
           GLYGDALDCFKRMLFEGVKMDIMTIPSVLNACGGEGDLRKGQEIHCLVLKSQLFVADVAI
Sbjct: 121 GLYGDALDCFKRMLFEGVKMDIMTIPSVLNACGGEGDLRKGQEIHCLVLKSQLFVADVAI 180

Query: 246 GNSLIDMYAKCGSLFDAEEVFRNMSSTNIVTWTTMISCYGAHGKGEKSLALFNKMKDCGI 305
           GNSLIDMYAKCGSLFDAEEVFRNMSSTNIVTWTTMISCYGAHGKGEKSLALFNKMKDCGI
Sbjct: 181 GNSLIDMYAKCGSLFDAEEVFRNMSSTNIVTWTTMISCYGAHGKGEKSLALFNKMKDCGI 240

Query: 306 QPNSVTLTAILASCSHAGYINEGWRIFKSFVSDYEVEPTVEHYACVVDLLSRFGFLQEAF 365
           QPNSVTLTAILASCSHAGYINEGWRIFKSFVSDYEVEPTVEHYACVVDLLSRFGFLQEAF
Sbjct: 241 QPNSVTLTAILASCSHAGYINEGWRIFKSFVSDYEVEPTVEHYACVVDLLSRFGFLQEAF 300

Query: 366 MLIINMKHTAAASVWGALLSGCMMHKNIEIGEIAANRLFKLEPKNPSNFIALIGIYESLG 425
           MLIINMKHTAAASVWGALLSGCMMHKNIEIGEIAANRLFKLEPKNPSNFIALIGIYESLG
Sbjct: 301 MLIINMKHTAAASVWGALLSGCMMHKNIEIGEIAANRLFKLEPKNPSNFIALIGIYESLG 360

Query: 426 MSHGVSLTRGKMRELGLTKLPGCSWITIEGVVHKFYGGDKSHPLGLRIFETLSAVKQAS 485
           MSHGVSLTRGKMRELGLTKLPGCSWITIEGVVHKFYGGDKSHPLGLRIFETLSAVKQAS
Sbjct: 361 MSHGVSLTRGKMRELGLTKLPGCSWITIEGVVHKFYGGDKSHPLGLRIFETLSAVKQAS 419

[Close]

BLAST of CmoCh20G010730 vs. ExPASy TrEMBL
Match: A0A5D3BTE8 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold680G00690 PE=4 SV=1)

HSP 1 Score: 843.6 bits (2178), Expect = 4.9e-241
Identity = 400/484 (82.64%), Postives = 438/484 (90.50%), Query Frame = 0


Query: 1   MSQSTSRFSLILRNCARLNEVAQAKQAHAQILIHGLIPHLTLVTDLLLVYCKCGVLHDAR 60
           +S STSRFS +LR+CA    +AQAKQ HAQILIHG +PHLTL+TDLLLVYCKCG LHDAR
Sbjct: 3   LSHSTSRFSFLLRSCAHSYAIAQAKQTHAQILIHGFLPHLTLITDLLLVYCKCGFLHDAR 62

Query: 61  KVFDKMTQRNMHSWNILIASYVHSSLHFDAINVFNEFRGLGFLPDHYTLPQMFKVSVGIG 120
            VFDKMT RNMHSWNILIASYVH+SL+FDA+NVFNEFR  GFLPDHYTLPQMFK SVG G
Sbjct: 63  NVFDKMTHRNMHSWNILIASYVHNSLYFDALNVFNEFRDHGFLPDHYTLPQMFKASVGTG 122

Query: 121 DVYMGKRLHCWTIKLGFEGYVVVASTVLDFYAKYGVVGDAKKVFDNMILKDTISWNSMIS 180
           DVY+GKRLHCWTIKLGF GYVVV STVLDFYAKYG+VGDA+KVFD+MI KDT+SWNSMIS
Sbjct: 123 DVYLGKRLHCWTIKLGFVGYVVVDSTVLDFYAKYGIVGDARKVFDDMIFKDTVSWNSMIS 182

Query: 181 GYGRAGLYGDALDCFKRMLFEGVKMDIMTIPSVLNACGGEGDLRKGQEIHCLVLKSQLFV 240
           GYGRAG+Y DALDCFKRML EG  MD MTIPSVLNACGGEGDLRKG+EIHCLVLKS +  
Sbjct: 183 GYGRAGVYRDALDCFKRMLLEGANMDFMTIPSVLNACGGEGDLRKGKEIHCLVLKSPVLA 242

Query: 241 ADVAIGNSLIDMYAKCGSLFDAEEVFRNMSSTNIVTWTTMISCYGAHGKGEKSLALFNKM 300
           ADVA+GNSLIDMY+KCGSL ++E+VF NMS  NIVTWTTMISCYGAHGKGEKSL LFNKM
Sbjct: 243 ADVAVGNSLIDMYSKCGSLLNSEKVFWNMSRLNIVTWTTMISCYGAHGKGEKSLVLFNKM 302

Query: 301 KDCGIQPNSVTLTAILASCSHAGYINEGWRIFKSFVSDYEVEPTVEHYACVVDLLSRFGF 360
           KDCGIQPNSVTLTAILASCSHAGYINEGWRIF+S VSD +VEPTVEHYACVVDLLSRFGF
Sbjct: 303 KDCGIQPNSVTLTAILASCSHAGYINEGWRIFQSIVSDDKVEPTVEHYACVVDLLSRFGF 362

Query: 361 LQEAFMLIINMKHTAAASVWGALLSGCMMHKNIEIGEIAANRLFKLEPKNPSNFIALIGI 420
           L+EAF+LI NMK  AAAS+WGALLSGCM+H+N+E GEIAAN+LFKLEP NPSNFIALI I
Sbjct: 363 LKEAFLLIRNMKVKAAASIWGALLSGCMIHRNLEFGEIAANQLFKLEPTNPSNFIALISI 422

Query: 421 YESLGMSHGVSLTRGKMRELGLTKLPGCSWITIEGVVHKFYGGDKSHPLGLRIFETLSAV 480
           YESLGM HGVS+TR KMR LGLTK+PGCS ITI+GVVHKFYGG  SHPL LRIFETL++V
Sbjct: 423 YESLGMLHGVSVTREKMRGLGLTKVPGCSCITIDGVVHKFYGGGNSHPLALRIFETLNSV 482

Query: 481 KQAS 485
           +QA+
Sbjct: 483 RQAA 486

[Close]

BLAST of CmoCh20G010730 vs. TAIR 10
Match: AT3G24000.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 340.1 bits (871), Expect = 3.4e-93
Identity = 165/461 (35.79%), Postives = 263/461 (57.05%), Query Frame = 0


Query: 8   FSLILRNCARLNEVAQAKQAHAQILIHGLIPHLTLVTDLLLVYCKCGVLHDARKVFDKMT 67
           ++ +L+ C     + Q +  HA IL       + +   LL +Y KCG L +ARKVF+KM 
Sbjct: 63  YNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMP 122

Query: 68  QRNMHSWNILIASYVHSSLHFDAINVFNEFRGLGFLPDHYTLPQMFKVSVGIGDVYMGKR 127
           QR+  +W  LI+ Y       DA+  FN+    G+ P+ +TL  + K +        G +
Sbjct: 123 QRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQ 182

Query: 128 LHCWTIKLGFEGYVVVASTVLDFYAKYGVVGDAKKVFDNMILKDTISWNSMISGYGRAGL 187
           LH + +K GF+  V V S +LD Y +YG++ DA+ VFD +  ++ +SWN++I+G+ R   
Sbjct: 183 LHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSG 242

Query: 188 YGDALDCFKRMLFEGVKMDIMTIPSVLNACGGEGDLRKGQEIHCLVLKSQLFVADVAIGN 247
              AL+ F+ ML +G +    +  S+  AC   G L +G+ +H  ++KS   +   A GN
Sbjct: 243 TEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFA-GN 302

Query: 248 SLIDMYAKCGSLFDAEEVFRNMSSTNIVTWTTMISCYGAHGKGEKSLALFNKMKDCGIQP 307
           +L+DMYAK GS+ DA ++F  ++  ++V+W ++++ Y  HG G++++  F +M+  GI+P
Sbjct: 303 TLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRP 362

Query: 308 NSVTLTAILASCSHAGYINEGWRIFKSFVSDYEVEPTVEHYACVVDLLSRFGFLQEAFML 367
           N ++  ++L +CSH+G ++EGW  ++    D  + P   HY  VVDLL R G L  A   
Sbjct: 363 NEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRF 422

Query: 368 IINMKHTAAASVWGALLSGCMMHKNIEIGEIAANRLFKLEPKNPSNFIALIGIYESLGMS 427
           I  M     A++W ALL+ C MHKN E+G  AA  +F+L+P +P   + L  IY S G  
Sbjct: 423 IEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRW 482

Query: 428 HGVSLTRGKMRELGLTKLPGCSWITIEGVVHKFYGGDKSHP 469
           +  +  R KM+E G+ K P CSW+ IE  +H F   D+ HP
Sbjct: 483 NDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHP 521

[Close]

BLAST of CmoCh20G010730 vs. TAIR 10
Match: AT3G26782.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 338.2 bits (866), Expect = 1.3e-92
Identity = 190/528 (35.98%), Postives = 298/528 (56.44%), Query Frame = 0


Query: 6   SRFSLILRNCARLNEVAQAKQAHAQILIHGLIPHLTLVTDLLLVYCKCGVLHDARKVFDK 65
           S F   ++ C+ L ++   KQ H Q  + G    + + + L+++Y  CG L DARKVFD+
Sbjct: 77  SSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDE 136

Query: 66  MTQRNMHSWNILIASYVHSSLHFDAINVFNEFRGLGFLPDHYTLPQMFKVSVGIGDVY-- 125
           + +RN+ SW  +I  Y  +    DA+++F +      + ++     MF  S+G+  V   
Sbjct: 137 IPKRNIVSWTSMIRGYDLNGNALDAVSLFKDL----LVDENDDDDAMFLDSMGLVSVISA 196

Query: 126 --------MGKRLHCWTIKLGFEGYVVVASTVLDFYAK--YGVVGDAKKVFDNMILKDTI 185
                   + + +H + IK GF+  V V +T+LD YAK   G V  A+K+FD ++ KD +
Sbjct: 197 CSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRV 256

Query: 186 SWNSMISGYGRAGLYGDALDCFKRML-FEGVKMDIMTIPSVLNACGGEGDLRKGQEIHCL 245
           S+NS++S Y ++G+  +A + F+R++  + V  + +T+ +VL A    G LR G+ IH  
Sbjct: 257 SYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQ 316

Query: 246 VLKSQLFVADVAIGNSLIDMYAKCGSLFDAEEVFRNMSSTNIVTWTTMISCYGAHGKGEK 305
           V++  L   DV +G S+IDMY KCG +  A + F  M + N+ +WT MI+ YG HG   K
Sbjct: 317 VIRMGL-EDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAK 376

Query: 306 SLALFNKMKDCGIQPNSVTLTAILASCSHAGYINEGWRIFKSFVSDYEVEPTVEHYACVV 365
           +L LF  M D G++PN +T  ++LA+CSHAG   EGWR F +    + VEP +EHY C+V
Sbjct: 377 ALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMV 436

Query: 366 DLLSRFGFLQEAFMLIINMKHTAAASVWGALLSGCMMHKNIEIGEIAANRLFKLEPKNPS 425
           DLL R GFLQ+A+ LI  MK    + +W +LL+ C +HKN+E+ EI+  RLF+L+  N  
Sbjct: 437 DLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCG 496

Query: 426 NFIALIGIYESLGMSHGVSLTRGKMRELGLTKLPGCSWITIEGVVHKFYGGDKSHPLGLR 485
            ++ L  IY   G    V   R  M+  GL K PG S + + G VH F  GD+ HP   +
Sbjct: 497 YYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREK 556

Query: 486 IFETLSAVKQASTPLCYISTQPVEISSTSGIKSNPRSVQEHLYLRHHA 521
           I+E L+ + +      Y       +S+TS +  +    ++ + LR H+
Sbjct: 557 IYEFLAELNRKLLEAGY-------VSNTSSVCHDVDEEEKEMTLRVHS 592

[Close]

BLAST of CmoCh20G010730 vs. TAIR 10
Match: AT5G04780.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 336.7 bits (862), Expect = 3.8e-92
Identity = 168/467 (35.97%), Postives = 276/467 (59.10%), Query Frame = 0


Query: 11  ILRNCARLNEVAQAKQAHAQILIHGLIPHLTLVTDLLLVYCKCGVLHDARKVFDKMTQRN 70
           IL+ CAR   V +AK  H +I+   L   +TL+  L+  Y KCG +  AR+VFD M +R+
Sbjct: 67  ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 126

Query: 71  MHSWNILIASYVHSSLHFDAINVFNEFRGLGFLPDHYTLPQMFKVSVGIGDVYMGKRLHC 130
           + SWN +I  Y  + +  +A+++F E R  GF    +T+  +        D    K+LHC
Sbjct: 127 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHC 186

Query: 131 WTIKLGFEGYVVVASTVLDFYAKYGVVGDAKKVFDNMILKDTISWNSMISGYGRAGLYGD 190
            ++K   +  + V + +LD YAK G++ DA +VF++M  K +++W+SM++GY +   Y +
Sbjct: 187 LSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEE 246

Query: 191 ALDCFKRMLFEGVKMDIMTIPSVLNACGGEGDLRKGQEIHCLVLKSQLFVADVAIGNSLI 250
           AL  ++R     ++ +  T+ SV+ AC     L +G+++H ++ KS  F ++V + +S +
Sbjct: 247 ALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSG-FGSNVFVASSAV 306

Query: 251 DMYAKCGSLFDAEEVFRNMSSTNIVTWTTMISCYGAHGKGEKSLALFNKMKDCGIQPNSV 310
           DMYAKCGSL ++  +F  +   N+  W T+IS +  H + ++ + LF KM+  G+ PN V
Sbjct: 307 DMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEV 366

Query: 311 TLTAILASCSHAGYINEGWRIFKSFVSDYEVEPTVEHYACVVDLLSRFGFLQEAFMLIIN 370
           T +++L+ C H G + EG R FK   + Y + P V HY+C+VD+L R G L EA+ LI +
Sbjct: 367 TFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKS 426

Query: 371 MKHTAAASVWGALLSGCMMHKNIEIGEIAANRLFKLEPKNPSNFIALIGIYESLGMSHGV 430
           +     AS+WG+LL+ C ++KN+E+ E+AA +LF+LEP+N  N + L  IY +      +
Sbjct: 427 IPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEI 486

Query: 431 SLTRGKMRELGLTKLPGCSWITIEGVVHKFYGGDKSHPLGLRIFETL 478
           + +R  +R+  + K+ G SWI I+  VH F  G+  HP    I  TL
Sbjct: 487 AKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTL 532

[Close]

BLAST of CmoCh20G010730 vs. TAIR 10
Match: AT4G18750.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 332.8 bits (852), Expect = 5.4e-91
Identity = 167/426 (39.20%), Postives = 260/426 (61.03%), Query Frame = 0


Query: 46  LLLVYCKCGVLHDARKVFDKMTQRNMHSWNILIASYVHSSLHFDAINVFNEFRGLGFLPD 105
           LL +Y KCG L  A+ VF +M+ R++ S+  +IA Y    L  +A+ +F E    G  PD
Sbjct: 337 LLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPD 396

Query: 106 HYTLPQMFKVSVGIGDVYMGKRLHCWTIK--LGFEGYVVVASTVLDFYAKYGVVGDAKKV 165
            YT+  +         +  GKR+H W  +  LGF+  + V++ ++D YAK G + +A+ V
Sbjct: 397 VYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFD--IFVSNALMDMYAKCGSMQEAELV 456

Query: 166 FDNMILKDTISWNSMISGYGRAGLYGDALDCFKRMLFE-GVKMDIMTIPSVLNACGGEGD 225
           F  M +KD ISWN++I GY +     +AL  F  +L E     D  T+  VL AC     
Sbjct: 457 FSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSA 516

Query: 226 LRKGQEIHCLVLKSQLFVADVAIGNSLIDMYAKCGSLFDAEEVFRNMSSTNIVTWTTMIS 285
             KG+EIH  ++++  F +D  + NSL+DMYAKCG+L  A  +F +++S ++V+WT MI+
Sbjct: 517 FDKGREIHGYIMRNGYF-SDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIA 576

Query: 286 CYGAHGKGEKSLALFNKMKDCGIQPNSVTLTAILASCSHAGYINEGWRIFKSFVSDYEVE 345
            YG HG G++++ALFN+M+  GI+ + ++  ++L +CSH+G ++EGWR F     + ++E
Sbjct: 577 GYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIE 636

Query: 346 PTVEHYACVVDLLSRFGFLQEAFMLIINMKHTAAASVWGALLSGCMMHKNIEIGEIAANR 405
           PTVEHYAC+VD+L+R G L +A+  I NM     A++WGALL GC +H ++++ E  A +
Sbjct: 637 PTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEK 696

Query: 406 LFKLEPKNPSNFIALIGIYESLGMSHGVSLTRGKMRELGLTKLPGCSWITIEGVVHKFYG 465
           +F+LEP+N   ++ +  IY        V   R ++ + GL K PGCSWI I+G V+ F  
Sbjct: 697 VFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVA 756

Query: 466 GDKSHP 469
           GD S+P
Sbjct: 757 GDSSNP 759

[Close]

BLAST of CmoCh20G010730 vs. TAIR 10
Match: AT3G63370.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 325.5 bits (833), Expect = 8.6e-89
Identity = 166/470 (35.32%), Postives = 262/470 (55.74%), Query Frame = 0


Query: 11  ILRNCARLNEVAQAKQAHAQILIHGLIPHLTLVTDLLLVYCKCGVLHDARKVFDKMTQRN 70
           I+    RL+ +    + HA ++ HG   +L +   L+ +Y KC +     + F +M  ++
Sbjct: 392 IIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKD 451

Query: 71  MHSWNILIASYVHSSLHFDAINVFNEFRGLGFLPDHYTLPQMFKVSVGIGDVYMGKRLHC 130
           + SW  +IA Y  +  H +A+ +F +        D   L  + + S  +  + + K +HC
Sbjct: 452 LISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHC 511

Query: 131 WTIKLGFEGYVVVASTVLDFYAKYGVVGDAKKVFDNMILKDTISWNSMISGYGRAGLYGD 190
             ++ G     V+ + ++D Y K   +G A +VF+++  KD +SW SMIS     G   +
Sbjct: 512 HILRKGLLD-TVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESE 571

Query: 191 ALDCFKRMLFEGVKMDIMTIPSVLNACGGEGDLRKGQEIHCLVLKSQLFVADVAIGNSLI 250
           A++ F+RM+  G+  D + +  +L+A      L KG+EIHC +L+   F  + +I  +++
Sbjct: 572 AVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKG-FCLEGSIAVAVV 631

Query: 251 DMYAKCGSLFDAEEVFRNMSSTNIVTWTTMISCYGAHGKGEKSLALFNKMKDCGIQPNSV 310
           DMYA CG L  A+ VF  +    ++ +T+MI+ YG HG G+ ++ LF+KM+   + P+ +
Sbjct: 632 DMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHI 691

Query: 311 TLTAILASCSHAGYINEGWRIFKSFVSDYEVEPTVEHYACVVDLLSRFGFLQEAFMLIIN 370
           +  A+L +CSHAG ++EG    K    +YE+EP  EHY C+VD+L R   + EAF  +  
Sbjct: 692 SFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKM 751

Query: 371 MKHTAAASVWGALLSGCMMHKNIEIGEIAANRLFKLEPKNPSNFIALIGIYESLGMSHGV 430
           MK    A VW ALL+ C  H   EIGEIAA RL +LEPKNP N + +  ++   G  + V
Sbjct: 752 MKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDV 811

Query: 431 SLTRGKMRELGLTKLPGCSWITIEGVVHKFYGGDKSHPLGLRIFETLSAV 481
              R KM+  G+ K PGCSWI ++G VHKF   DKSHP    I+E LS V
Sbjct: 812 EKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEV 859

The following BLAST results are available for this feature:

BLAST of CmoCh20G010730 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LIQ7	4.8e-92	35.79	Pentatricopeptide repeat-containing protein At3g24000, mitochondrial OS=Arabidop...	[more]
Q9LW32	1.8e-91	35.98	Pentatricopeptide repeat-containing protein At3g26782, mitochondrial OS=Arabidop...	[more]
Q9LZ19	5.3e-91	35.97	Pentatricopeptide repeat-containing protein At5g04780, mitochondrial OS=Arabidop...	[more]
Q9SN39	7.6e-90	39.20	Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis t...	[more]
Q9M1V3	1.2e-87	35.32	Pentatricopeptide repeat-containing protein At3g63370, chloroplastic OS=Arabidop...	[more]

BLAST of CmoCh20G010730 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EV55	5.9e-287	99.39	pentatricopeptide repeat-containing protein At3g24000, mitochondrial-like isofor...	[more]
A0A6J1F0Z8	2.2e-286	100.00	pentatricopeptide repeat-containing protein At3g24000, mitochondrial-like isofor...	[more]
A0A6J1I2G9	4.6e-271	94.63	pentatricopeptide repeat-containing protein At5g04780, mitochondrial-like isofor...	[more]
A0A6J1EVE9	1.9e-248	100.00	pentatricopeptide repeat-containing protein At5g56310-like isoform X3 OS=Cucurbi...	[more]
A0A5D3BTE8	4.9e-241	82.64	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]

BLAST of CmoCh20G010730 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G24000.1	3.4e-93	35.79	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G26782.1	1.3e-92	35.98	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G04780.1	3.8e-92	35.97	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT4G18750.1	5.4e-91	39.20	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G63370.1	8.6e-89	35.32	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 46..70 e-value: 0.019 score: 15.2 coord: 247..271 e-value: 7.5E-4 score: 19.6 coord: 73..102 e-value: 0.0037 score: 17.4
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 173..206 e-value: 3.2E-9 score: 34.4 coord: 247..275 e-value: 4.5E-4 score: 18.2 coord: 275..308 e-value: 9.1E-10 score: 36.1 coord: 72..105 e-value: 3.7E-4 score: 18.5
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 273..319 e-value: 9.6E-13 score: 48.1 coord: 170..217 e-value: 7.9E-9 score: 35.6
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 70..104 score: 9.273317
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 273..307 score: 12.474017
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 171..205 score: 12.090371
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 247..423 e-value: 1.7E-33 score: 118.3
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 122..231 e-value: 9.3E-19 score: 69.5 coord: 2..121 e-value: 3.4E-17 score: 64.4
None	No IPR available	PANTHER	PTHR24015:SF1973	OS11G0213500 PROTEIN	coord: 3..488
None	No IPR available	PANTHER	PTHR24015	OS07G0578800 PROTEIN-RELATED	coord: 3..488

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh20G010730.1	CmoCh20G010730.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009451	RNA modification
cellular_component	GO:0043231	intracellular membrane-bounded organelle
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003723	RNA binding