CmoCh20G010720 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh20G010720
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Glyco_hydro_18 domain-containing protein
Location	Cmo_Chr20: 9921524 .. 9922333 (-)
RNA-Seq Expression	CmoCh20G010720
Synteny	CmoCh20G010720

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGGAGTACATCGGAGCAACAGGCATTCCAATCACCTTCGATAGCGTCCCGATCTTCGATGATATCGATTTCCATTTCATCCTCAGCTTCGCCATCGACGCAGATCCCTCCGGCAATCCTCAAAATGGGAAATTCTCCAACTATTGGGAGCCCTCACTAACCCCAGGATCAGTTGCAGCCATTAAAGCCGAACACCCGAACGTCAAAGCCCTAGCGAGCCTCTCGGGTTGGAGCCTCGGCGACACCGTCCTCCGATGGCAAAACCCTCGAAACCCTAATCTCTGGATCACCAATGCCTTCTCCACTCTCAAAGCTCTTATCATAAAATACCACCTCGACGGCATCGACATCGACTATGAGAACTTCCCAAAACACGGCTCAAACTTCGCCTTCTGCATCGGCGAGCTCATAACCCTACTTAAGAACCAAAGCGTCATCTCCGTAGCCACAATTGCGCCGTATTACTCGACGGTTACACCTTACTTGGAGCTCTTCCATGGCTATGGGGAGGTGATTGATTATGTCAACTACCAATTTTATACCGACAAAGTGAGAACGGCTAAGGCTTACTTGAAGAGATTTGAGGTTAGAGCTAAGGAGTTTGGAGAAGGGAAGTTGCTACCAAGCTATGAGGTGAATGGGAGAGGGATTCAAGGGGATGCCTTTTTTGAAGCTTTGAATTTGTTGGATGAAAATGGATTTGATATCAATGGAGTCATGATCTTCTCTGCGGATGCTTCCCTCTCCAATGGCTTCCATTTCGAAACGAGATCTCAACAGTTCTTGCTCAACTCGACCATCTCGTGA

mRNA sequence

ATGATGGAGTACATCGGAGCAACAGGCATTCCAATCACCTTCGATAGCGTCCCGATCTTCGATGATATCGATTTCCATTTCATCCTCAGCTTCGCCATCGACGCAGATCCCTCCGGCAATCCTCAAAATGGGAAATTCTCCAACTATTGGGAGCCCTCACTAACCCCAGGATCAGTTGCAGCCATTAAAGCCGAACACCCGAACGTCAAAGCCCTAGCGAGCCTCTCGGGTTGGAGCCTCGGCGACACCGTCCTCCGATGGCAAAACCCTCGAAACCCTAATCTCTGGATCACCAATGCCTTCTCCACTCTCAAAGCTCTTATCATAAAATACCACCTCGACGGCATCGACATCGACTATGAGAACTTCCCAAAACACGGCTCAAACTTCGCCTTCTGCATCGGCGAGCTCATAACCCTACTTAAGAACCAAAGCGTCATCTCCGTAGCCACAATTGCGCCGTATTACTCGACGGTTACACCTTACTTGGAGCTCTTCCATGGCTATGGGGAGGTGATTGATTATGTCAACTACCAATTTTATACCGACAAAGTGAGAACGGCTAAGGCTTACTTGAAGAGATTTGAGGTTAGAGCTAAGGAGTTTGGAGAAGGGAAGTTGCTACCAAGCTATGAGGTGAATGGGAGAGGGATTCAAGGGGATGCCTTTTTTGAAGCTTTGAATTTGTTGGATGAAAATGGATTTGATATCAATGGAGTCATGATCTTCTCTGCGGATGCTTCCCTCTCCAATGGCTTCCATTTCGAAACGAGATCTCAACAGTTCTTGCTCAACTCGACCATCTCGTGA

Coding sequence (CDS)

ATGATGGAGTACATCGGAGCAACAGGCATTCCAATCACCTTCGATAGCGTCCCGATCTTCGATGATATCGATTTCCATTTCATCCTCAGCTTCGCCATCGACGCAGATCCCTCCGGCAATCCTCAAAATGGGAAATTCTCCAACTATTGGGAGCCCTCACTAACCCCAGGATCAGTTGCAGCCATTAAAGCCGAACACCCGAACGTCAAAGCCCTAGCGAGCCTCTCGGGTTGGAGCCTCGGCGACACCGTCCTCCGATGGCAAAACCCTCGAAACCCTAATCTCTGGATCACCAATGCCTTCTCCACTCTCAAAGCTCTTATCATAAAATACCACCTCGACGGCATCGACATCGACTATGAGAACTTCCCAAAACACGGCTCAAACTTCGCCTTCTGCATCGGCGAGCTCATAACCCTACTTAAGAACCAAAGCGTCATCTCCGTAGCCACAATTGCGCCGTATTACTCGACGGTTACACCTTACTTGGAGCTCTTCCATGGCTATGGGGAGGTGATTGATTATGTCAACTACCAATTTTATACCGACAAAGTGAGAACGGCTAAGGCTTACTTGAAGAGATTTGAGGTTAGAGCTAAGGAGTTTGGAGAAGGGAAGTTGCTACCAAGCTATGAGGTGAATGGGAGAGGGATTCAAGGGGATGCCTTTTTTGAAGCTTTGAATTTGTTGGATGAAAATGGATTTGATATCAATGGAGTCATGATCTTCTCTGCGGATGCTTCCCTCTCCAATGGCTTCCATTTCGAAACGAGATCTCAACAGTTCTTGCTCAACTCGACCATCTCGTGA

Protein sequence

MMEYIGATGIPITFDSVPIFDDIDFHFILSFAIDADPSGNPQNGKFSNYWEPSLTPGSVAAIKAEHPNVKALASLSGWSLGDTVLRWQNPRNPNLWITNAFSTLKALIIKYHLDGIDIDYENFPKHGSNFAFCIGELITLLKNQSVISVATIAPYYSTVTPYLELFHGYGEVIDYVNYQFYTDKVRTAKAYLKRFEVRAKEFGEGKLLPSYEVNGRGIQGDAFFEALNLLDENGFDINGVMIFSADASLSNGFHFETRSQQFLLNSTIS

Homology

[Close]

BLAST of CmoCh20G010720 vs. ExPASy Swiss-Prot
Match: Q9SLP4 (Chitinase 1 OS=Tulipa saxatilis subsp. bakeri OX=110455 PE=1 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 7.6e-48
Identity = 112/271 (41.33%), Postives = 164/271 (60.52%), Query Frame = 0


Query: 3   EYIGATGIPITFDSVPIFDDIDFHFILSFAID--ADPSGNPQNGKFSNYWEP-SLTPGSV 62
           EYIG+    + F  VPI  D+DFHFIL+FAID  +  S  P NG F  +W+  +L+P  V
Sbjct: 31  EYIGSQFNDVKFSDVPINPDVDFHFILAFAIDYTSGSSPTPTNGNFKPFWDTNNLSPSQV 90

Query: 63  AAIKAEHPNVKALASLSGWSLGDTVLRWQNPRNPNLWITNAFSTLKALIIKYHLDGIDID 122
           AA+K  H NVK   SL G S+G   + + +P + + W+ NA S+L  +I +YHLDGIDID
Sbjct: 91  AAVKRTHSNVKVSLSLGGDSVGGKNV-FFSPSSVSSWVENAVSSLTRIIKQYHLDGIDID 150

Query: 123 YENFPKHGSNFAFCIGELITLLKNQSVISVATIAPY--YSTVTPYLELFHGYGEVIDYVN 182
           YE+F    + FA CIG+L+T LK   V+S  +IAP+      + Y  L+  YG  IDYVN
Sbjct: 151 YEHFKGDPNTFAECIGQLVTRLKKNEVVSFVSIAPFDDAQVQSHYQALWEKYGHQIDYVN 210

Query: 183 YQFYTDKVRTA-KAYLKRFEVRAKEFGEGKLLPSYEVNGRG--IQGDAFFEALNLLDENG 242
           +QFY    RT+ + +LK FE ++  +  GK+L S+  +  G     + FF A ++L + G
Sbjct: 211 FQFYAYSARTSVEQFLKYFEEQSSNYHGGKVLVSFSTDSSGGLKPDNGFFRACSILKKQG 270

Query: 243 FDINGVMIFSADASL--SNGFHFETRSQQFL 264
             ++G+ ++SAD SL  +N F +E ++Q  L
Sbjct: 271 -KLHGIFVWSADDSLMSNNVFRYEMQAQSML 299

[Close]

BLAST of CmoCh20G010720 vs. ExPASy Swiss-Prot
Match: Q7M443 (Chitinase 2 OS=Tulipa saxatilis subsp. bakeri OX=110455 PE=1 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 1.4e-46
Identity = 111/271 (40.96%), Postives = 164/271 (60.52%), Query Frame = 0


Query: 3   EYIGATGIPITFDSVPIFDDIDFHFILSFAID--ADPSGNPQNGKFSNYWEP-SLTPGSV 62
           EYIGA    + F  VPI  ++DFHFIL+FAID  +  S  P NG F+ +W+  +L+P  V
Sbjct: 5   EYIGAQFNDVKFSDVPINPNVDFHFILAFAIDYTSGSSPTPTNGNFNPFWDTNNLSPSQV 64

Query: 63  AAIKAEHPNVKALASLSGWSLGDTVLRWQNPRNPNLWITNAFSTLKALIIKYHLDGIDID 122
           AAIK  + NVK   SL G S+G   + + NP + + W+ NA S+L  +I +YHLDGIDID
Sbjct: 65  AAIKRTYNNVKVSVSLGGNSVGGERV-FFNPSSVSSWVDNAVSSLTKIIKQYHLDGIDID 124

Query: 123 YENFPKHGSNFAFCIGELITLLKNQSVISVATIAPY--YSTVTPYLELFHGYGEVIDYVN 182
           YE+F    + FA CIG+L+T LK   V+S  +IAP+      + Y  L+  YG  IDYVN
Sbjct: 125 YEHFKGDPNTFAECIGQLVTRLKKNGVVSFVSIAPFDDAQVQSHYQALWEKYGHQIDYVN 184

Query: 183 YQFYTDKVR-TAKAYLKRFEVRAKEFGEGKLLPSYEVNGRG--IQGDAFFEALNLLDENG 242
           +QFY    R + + +LK FE++   +  GK+L S+  +  G     + FF+A ++L + G
Sbjct: 185 FQFYVYSSRMSVEQFLKYFEMQRSNYPGGKVLVSFSTDNSGGLKPRNGFFDACSILKKQG 244

Query: 243 FDINGVMIFSADASLSNG--FHFETRSQQFL 264
             ++G+ ++SAD SL +   F +E ++Q  L
Sbjct: 245 -KLHGIFVWSADDSLMSNDVFKYEMQAQSLL 273

[Close]

BLAST of CmoCh20G010720 vs. ExPASy Swiss-Prot
Match: P39657 (RuBisCO-associated protein OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 3.3e-11
Identity = 44/135 (32.59%), Postives = 69/135 (51.11%), Query Frame = 0


Query: 24  DFHFILSFAIDADPSGNPQNGKFSNYWE-PSLTPGSVAAIKAEHP----NVKALASLSGW 83
           +F   LS A D D   N  NGKF  YW+   +TP  +   K ++      VK L S+ G 
Sbjct: 28  EFQVTLSLARDYD-GNNSTNGKFIPYWDTEKVTPEVIKKFKKKYEPTALRVKVLVSI-GN 87

Query: 84  SLGDTVLRWQNPRNPNLWITNAFSTLKALIIKYHLDGIDIDYENFPKHGSNFAFCIGELI 143
                     +  N   W++ A ++LK++I  Y+LDGID+ YE+   + ++F   +G L+
Sbjct: 88  KNKQFPFTIGSDSNSEAWVSEATASLKSIIKTYNLDGIDVSYEDIAANEADFVNSVGGLV 147

Query: 144 TLLKNQSVISVATIA 154
             LK   +I+VA+ A
Sbjct: 148 RNLKQNKLITVASFA 160

[Close]

BLAST of CmoCh20G010720 vs. ExPASy TrEMBL
Match: A0A6J1EV84 (chitinase 1-like OS=Cucurbita moschata OX=3662 GN=LOC111438357 PE=3 SV=1)

HSP 1 Score: 552.0 bits (1421), Expect = 1.4e-153
Identity = 269/269 (100.00%), Postives = 269/269 (100.00%), Query Frame = 0


Query: 1   MMEYIGATGIPITFDSVPIFDDIDFHFILSFAIDADPSGNPQNGKFSNYWEPSLTPGSVA 60
           MMEYIGATGIPITFDSVPIFDDIDFHFILSFAIDADPSGNPQNGKFSNYWEPSLTPGSVA
Sbjct: 1   MMEYIGATGIPITFDSVPIFDDIDFHFILSFAIDADPSGNPQNGKFSNYWEPSLTPGSVA 60

Query: 61  AIKAEHPNVKALASLSGWSLGDTVLRWQNPRNPNLWITNAFSTLKALIIKYHLDGIDIDY 120
           AIKAEHPNVKALASLSGWSLGDTVLRWQNPRNPNLWITNAFSTLKALIIKYHLDGIDIDY
Sbjct: 61  AIKAEHPNVKALASLSGWSLGDTVLRWQNPRNPNLWITNAFSTLKALIIKYHLDGIDIDY 120

Query: 121 ENFPKHGSNFAFCIGELITLLKNQSVISVATIAPYYSTVTPYLELFHGYGEVIDYVNYQF 180
           ENFPKHGSNFAFCIGELITLLKNQSVISVATIAPYYSTVTPYLELFHGYGEVIDYVNYQF
Sbjct: 121 ENFPKHGSNFAFCIGELITLLKNQSVISVATIAPYYSTVTPYLELFHGYGEVIDYVNYQF 180

Query: 181 YTDKVRTAKAYLKRFEVRAKEFGEGKLLPSYEVNGRGIQGDAFFEALNLLDENGFDINGV 240
           YTDKVRTAKAYLKRFEVRAKEFGEGKLLPSYEVNGRGIQGDAFFEALNLLDENGFDINGV
Sbjct: 181 YTDKVRTAKAYLKRFEVRAKEFGEGKLLPSYEVNGRGIQGDAFFEALNLLDENGFDINGV 240

Query: 241 MIFSADASLSNGFHFETRSQQFLLNSTIS 270
           MIFSADASLSNGFHFETRSQQFLLNSTIS
Sbjct: 241 MIFSADASLSNGFHFETRSQQFLLNSTIS 269

[Close]

BLAST of CmoCh20G010720 vs. ExPASy TrEMBL
Match: A0A6J1I699 (chitinase 1-like OS=Cucurbita maxima OX=3661 GN=LOC111470313 PE=3 SV=1)

HSP 1 Score: 543.9 bits (1400), Expect = 3.8e-151
Identity = 265/269 (98.51%), Postives = 266/269 (98.88%), Query Frame = 0


Query: 1   MMEYIGATGIPITFDSVPIFDDIDFHFILSFAIDADPSGNPQNGKFSNYWEPSLTPGSVA 60
           MMEYIGATGIPITFDSVPIFDDIDFHFILSFAIDADPSGNPQNGKFSNYWEPSLTP SVA
Sbjct: 1   MMEYIGATGIPITFDSVPIFDDIDFHFILSFAIDADPSGNPQNGKFSNYWEPSLTPESVA 60

Query: 61  AIKAEHPNVKALASLSGWSLGDTVLRWQNPRNPNLWITNAFSTLKALIIKYHLDGIDIDY 120
           AIKAEHPNVKALASLSGWSLGDTVLRWQNPRNPNLWITNAFSTLKALIIKYHLDGIDIDY
Sbjct: 61  AIKAEHPNVKALASLSGWSLGDTVLRWQNPRNPNLWITNAFSTLKALIIKYHLDGIDIDY 120

Query: 121 ENFPKHGSNFAFCIGELITLLKNQSVISVATIAPYYSTVTPYLELFHGYGEVIDYVNYQF 180
           ENFPKHGSNFAFCIGELITLLKNQSVISVATIAPYYSTVTPYLELFHGYGEVIDYVNYQF
Sbjct: 121 ENFPKHGSNFAFCIGELITLLKNQSVISVATIAPYYSTVTPYLELFHGYGEVIDYVNYQF 180

Query: 181 YTDKVRTAKAYLKRFEVRAKEFGEGKLLPSYEVNGRGIQGDAFFEALNLLDENGFDINGV 240
           YTDKVRTAKAYLKRFEVRAKEFG GKLLPSYEVNGRGIQGDAFFEALNLLDENGFDINGV
Sbjct: 181 YTDKVRTAKAYLKRFEVRAKEFGGGKLLPSYEVNGRGIQGDAFFEALNLLDENGFDINGV 240

Query: 241 MIFSADASLSNGFHFETRSQQFLLNSTIS 270
           MIFSADASLSNGFHFETRSQQFLLNS +S
Sbjct: 241 MIFSADASLSNGFHFETRSQQFLLNSNVS 269

[Close]

BLAST of CmoCh20G010720 vs. ExPASy TrEMBL
Match: A0A1S3CD03 (chitinase 2-like OS=Cucumis melo OX=3656 GN=LOC103499637 PE=3 SV=1)

HSP 1 Score: 488.8 bits (1257), Expect = 1.5e-134
Identity = 235/269 (87.36%), Postives = 253/269 (94.05%), Query Frame = 0


Query: 1   MMEYIGATGIPITFDSVPIFDDIDFHFILSFAIDADPSGNPQNGKFSNYWEPSLTPGSVA 60
           MMEYIGATGIP+TFD+VPIFDDIDFHFILSFAIDADPS NPQNGKFS YWEPSLTP SVA
Sbjct: 35  MMEYIGATGIPVTFDNVPIFDDIDFHFILSFAIDADPSANPQNGKFSPYWEPSLTPESVA 94

Query: 61  AIKAEHPNVKALASLSGWSLGDTVLRWQNPRNPNLWITNAFSTLKALIIKYHLDGIDIDY 120
           AIKA+HPNVKALASLSGWSL + VLRW+NP +PNLWI+NAFSTL+ L+ KYHLDGID+DY
Sbjct: 95  AIKAQHPNVKALASLSGWSLDNIVLRWRNPPDPNLWISNAFSTLQDLVNKYHLDGIDVDY 154

Query: 121 ENFPKHGSNFAFCIGELITLLKNQSVISVATIAPYYSTVTPYLELFHGYGEVIDYVNYQF 180
           ENFP+HGSNFAFCIGELITLLKNQSVISVATIAPYYSTV PYLELFHGYG+VID+VNYQF
Sbjct: 155 ENFPRHGSNFAFCIGELITLLKNQSVISVATIAPYYSTVLPYLELFHGYGKVIDFVNYQF 214

Query: 181 YTDKVRTAKAYLKRFEVRAKEFGEGKLLPSYEVNGRGIQGDAFFEALNLLDENGFDINGV 240
           YTDKV T +AYLKRFE+RAKEFG  KLLPSYEVNGRGIQGDAFFEAL+LLDENGFD+NGV
Sbjct: 215 YTDKVTTPEAYLKRFEIRAKEFGSAKLLPSYEVNGRGIQGDAFFEALSLLDENGFDVNGV 274

Query: 241 MIFSADASLSNGFHFETRSQQFLLNSTIS 270
           MIFSADASLSN F FET+SQQFLLNST S
Sbjct: 275 MIFSADASLSNDFLFETKSQQFLLNSTPS 303

[Close]

BLAST of CmoCh20G010720 vs. ExPASy TrEMBL
Match: A0A142BTQ6 (Chitinase 1 OS=Cucumis melo OX=3656 GN=cht1 PE=2 SV=1)

HSP 1 Score: 486.9 bits (1252), Expect = 5.5e-134
Identity = 234/268 (87.31%), Postives = 252/268 (94.03%), Query Frame = 0


Query: 2   MEYIGATGIPITFDSVPIFDDIDFHFILSFAIDADPSGNPQNGKFSNYWEPSLTPGSVAA 61
           MEYIGATGIP+TFD+VPIFDDIDFHFILSFAIDADPS NPQNGKFS YWEPSLTP SVAA
Sbjct: 1   MEYIGATGIPVTFDNVPIFDDIDFHFILSFAIDADPSANPQNGKFSPYWEPSLTPESVAA 60

Query: 62  IKAEHPNVKALASLSGWSLGDTVLRWQNPRNPNLWITNAFSTLKALIIKYHLDGIDIDYE 121
           IKA+HPNVKALASLSGWSL + VLRW+NP +PNLWI+NAFSTL+ L+ KYHLDGID+DYE
Sbjct: 61  IKAQHPNVKALASLSGWSLDNIVLRWRNPPDPNLWISNAFSTLQDLVNKYHLDGIDVDYE 120

Query: 122 NFPKHGSNFAFCIGELITLLKNQSVISVATIAPYYSTVTPYLELFHGYGEVIDYVNYQFY 181
           NFP+HGSNFAFCIGELITLLKNQSVISVATIAPYYSTV PYLELFHGYG+VID+VNYQFY
Sbjct: 121 NFPRHGSNFAFCIGELITLLKNQSVISVATIAPYYSTVLPYLELFHGYGKVIDFVNYQFY 180

Query: 182 TDKVRTAKAYLKRFEVRAKEFGEGKLLPSYEVNGRGIQGDAFFEALNLLDENGFDINGVM 241
           TDKV T +AYLKRFE+RAKEFG  KLLPSYEVNGRGIQGDAFFEAL+LLDENGFD+NGVM
Sbjct: 181 TDKVTTPEAYLKRFEIRAKEFGSAKLLPSYEVNGRGIQGDAFFEALSLLDENGFDVNGVM 240

Query: 242 IFSADASLSNGFHFETRSQQFLLNSTIS 270
           IFSADASLSN F FET+SQQFLLNST S
Sbjct: 241 IFSADASLSNDFLFETKSQQFLLNSTPS 268

[Close]

BLAST of CmoCh20G010720 vs. ExPASy TrEMBL
Match: A0A5D3BSJ5 (Chitinase 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold680G00670 PE=3 SV=1)

HSP 1 Score: 486.9 bits (1252), Expect = 5.5e-134
Identity = 234/268 (87.31%), Postives = 252/268 (94.03%), Query Frame = 0


Query: 2   MEYIGATGIPITFDSVPIFDDIDFHFILSFAIDADPSGNPQNGKFSNYWEPSLTPGSVAA 61
           MEYIGATGIP+TFD+VPIFDDIDFHFILSFAIDADPS NPQNGKFS YWEPSLTP SVAA
Sbjct: 1   MEYIGATGIPVTFDNVPIFDDIDFHFILSFAIDADPSANPQNGKFSPYWEPSLTPESVAA 60

Query: 62  IKAEHPNVKALASLSGWSLGDTVLRWQNPRNPNLWITNAFSTLKALIIKYHLDGIDIDYE 121
           IKA+HPNVKALASLSGWSL + VLRW+NP +PNLWI+NAFSTL+ L+ KYHLDGID+DYE
Sbjct: 61  IKAQHPNVKALASLSGWSLDNIVLRWRNPPDPNLWISNAFSTLQDLVNKYHLDGIDVDYE 120

Query: 122 NFPKHGSNFAFCIGELITLLKNQSVISVATIAPYYSTVTPYLELFHGYGEVIDYVNYQFY 181
           NFP+HGSNFAFCIGELITLLKNQSVISVATIAPYYSTV PYLELFHGYG+VID+VNYQFY
Sbjct: 121 NFPRHGSNFAFCIGELITLLKNQSVISVATIAPYYSTVLPYLELFHGYGKVIDFVNYQFY 180

Query: 182 TDKVRTAKAYLKRFEVRAKEFGEGKLLPSYEVNGRGIQGDAFFEALNLLDENGFDINGVM 241
           TDKV T +AYLKRFE+RAKEFG  KLLPSYEVNGRGIQGDAFFEAL+LLDENGFD+NGVM
Sbjct: 181 TDKVTTPEAYLKRFEIRAKEFGSAKLLPSYEVNGRGIQGDAFFEALSLLDENGFDVNGVM 240

Query: 242 IFSADASLSNGFHFETRSQQFLLNSTIS 270
           IFSADASLSN F FET+SQQFLLNST S
Sbjct: 241 IFSADASLSNDFLFETKSQQFLLNSTPS 268

The following BLAST results are available for this feature:

BLAST of CmoCh20G010720 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SLP4	7.6e-48	41.33	Chitinase 1 OS=Tulipa saxatilis subsp. bakeri OX=110455 PE=1 SV=1	[more]
Q7M443	1.4e-46	40.96	Chitinase 2 OS=Tulipa saxatilis subsp. bakeri OX=110455 PE=1 SV=1	[more]
P39657	3.3e-11	32.59	RuBisCO-associated protein OS=Glycine max OX=3847 PE=2 SV=1	[more]

BLAST of CmoCh20G010720 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EV84	1.4e-153	100.00	chitinase 1-like OS=Cucurbita moschata OX=3662 GN=LOC111438357 PE=3 SV=1	[more]
A0A6J1I699	3.8e-151	98.51	chitinase 1-like OS=Cucurbita maxima OX=3661 GN=LOC111470313 PE=3 SV=1	[more]
A0A1S3CD03	1.5e-134	87.36	chitinase 2-like OS=Cucumis melo OX=3656 GN=LOC103499637 PE=3 SV=1	[more]
A0A142BTQ6	5.5e-134	87.31	Chitinase 1 OS=Cucumis melo OX=3656 GN=cht1 PE=2 SV=1	[more]
A0A5D3BSJ5	5.5e-134	87.31	Chitinase 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold680G006...	[more]

BLAST of CmoCh20G010720 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000677	Chitinase-like	PRINTS	PR00551	2SGLOBULIN	coord: 59..77 score: 40.79 coord: 17..36 score: 37.5
IPR001223	Glycoside hydrolase family 18, catalytic domain	PFAM	PF00704	Glyco_hydro_18	coord: 27..181 e-value: 1.8E-13 score: 50.9
IPR001223	Glycoside hydrolase family 18, catalytic domain	PROSITE	PS51910	GH18_2	coord: 1..269 score: 20.675575
None	No IPR available	GENE3D	3.20.20.80	Glycosidases	coord: 1..266 e-value: 1.3E-61 score: 210.6
None	No IPR available	PANTHER	PTHR46476:SF9	CHITINASE 2-LIKE	coord: 1..267
None	No IPR available	PANTHER	PTHR46476	CHITINASE 2-LIKE	coord: 1..267
IPR001579	Glycosyl hydrolases family 18 (GH18) active site	PROSITE	PS01095	GH18_1	coord: 113..121
IPR017853	Glycoside hydrolase superfamily	SUPERFAMILY	51445	(Trans)glycosidases	coord: 16..260

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh20G010720.1	CmoCh20G010720.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
molecular_function	GO:0004568	chitinase activity
molecular_function	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds