CmoCh20G010290 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh20G010290
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionBTB/POZ domain-containing protein TNFAIP1 isoform 1
LocationCmo_Chr20: 8866663 .. 8869788 (+)
RNA-Seq ExpressionCmoCh20G010290
SyntenyCmoCh20G010290
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AGCATCTAACTTCAAAATGGTCGGCCAAACATCCCTATATTTCCCCCCCTTCCTCTATACTCACACCGGCACTCCCTCTATGCTATCTCCCTATACGCTACAACCGCGCCAGCAGCCACGACTATCCAGTCTTCTTCTGCTCGTTTCCAAACCCCGCCCACACTCTTTCTTCCGCAGGTACCGTTTTCTTTTTTCTTCTTCATTTTGATTTCTTCAGTTCCCCGTTCGAAAATAGGGTCAATTTGGATGGGTTTAAATTTATAATCTAAAATCCTTCAATTTCCGAGAGATTTTGGACGGATAATTTTTTAGACGAAACGGGATTTCAGATGAGATTCAATTTCGAATTTTATTTTTTCTGTTTAAGCCAACAACGATGAATGATTGTTCTGATTGAAATCTTCCCTAATTCGGGAGTTTCAACGAGGATGATTTCATTTTGATTACTCGAGATTTCTACTTACGCTTTCGATCTCTATAGGGGAGGAGCGACGAACGAGTAAGCATGGCGCTGTGTATCTCTATTCCTTCCTTCTTGGATTCTGTTACTGCTTCTTCGCTATCTCGCACGTATTTTAGCCTCAGACGGCGGCCTTCCAATTCCGTCCATTTTCTTAACTTGAACCTTCCCACCTGGCCACTGTGTATTTGCCGAGCTTCCAATTCTCAACCTGGACCGTCGCCCAAACAGTCTGCCTCCACCGCTTCTAAGAAGAGGAAGAAAAAGGGTAAGGGAGATACCAAGGTTTTCAATCCTAGAGACATTGAAGTTGGGGACGATTTTAGTGTCGATGAGGCTGGACCCTCGAGCTCTACTTCCAATTCCAGTTATTTGTCGTACCACCCGACGACGTTGCCGAAACCGCCAGCTGGGTTTGTGTTAGATGACCATGGAAAGGTCCTCATGGCTTCAAACAAGCGAATTGCTACCATGGTAAGGTTTATTTCTCAGTTCCCTCTTGGAGGATTTTTTTAAAAAAAAAATTGCAACTCAGTGCTCCCCTGTTCACCTGATCGCCGGGGCATTTTGATTTTCATTGTATGAATGAGAATTTCAGTTTGCATTGATAATGAATACATCTGTAATTTTTTTGGAGTGCTCTTCCTTGATTCTTTTCTTGTAATTATACTATTAGAACAACCTCAATTAGGCGGCCTATTGTTATTATTGGATAAGAAACCTGTACGTATATTAAGAGAATAGAAAAAAAAAAAAAAAAACAACCCAAATGGCAGGGGAAGAGATAACCCCCTCCCAAAAGAACTAATCAGTAATTTAATGAAAGCTTGTTTTCATCAAAGAAAGAAAAATTACATAATTACTAGATTATCTTTATTTGTTCGTCTGTTTGTGTGTGTGTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAAAAACAACCCAAATGGCAGGGGAAGAGATAACCCCCTCCCAAAAGAACTAATCAGTAATTTAATGAAAGCTTGTTTTCATCAAAGAAAGAAAAATTACATAATTACTAGATTATCTTTATTTGTTCGTCTGTTTGTGTGTGTGTGTTTTTTTTTTTTTTTTTGTATTTGTATTTGTGATCTGATTAAATTCTTACTTTTTTCTTTTTGACAGGTCGATCCTTTAAATAACTTGCCTTTAGAATGCGTTATAAGAAGAATTTTTAGAAGTTCAAAAGGGGATGAGTGCATGCTGCTTTGCCCTGTGGACACGTGAGTGTTGTTACTTTCATGTCATTATGCTATAGCATTGACACATTGAAAGTTTGACGTCTTTTCTAATTTGCCTCAAAATTGCTGCAGGCCTGTTCAAATATTGAAGAGCAAGAATATTGACGGATGGTCAGCTGTATGCTTTCTTTTCATATGGTTAAATTCCTCGCTAGTTTTAGTTTGTTCATGAACTTGAGTGCGGACGGTTTTACAATATTAATTCACGTCGTGAAGCCAGTATATTTCAAATTTCTGTATGCTGTGAAAATACAATTTCATGTTTGTATTGTTTGTCCCTTTTATTTTCTTTTTGCTAAATAATGTTATTATATTTTTCTTTCTTCTATGTCTCCTAAGAAGAATGCTTGTGCAAGCGCTCATTGTTTAGCAAGGAATCTATGAAGATTAGAACTTGAATCACATTTCTAACCTCCTTCAAATTGCTTTTGTAATTTCCTCTCGAGTATAAAGCACTGTGGTCAAATCTGACACTTAGAAAGTACGGTTTAGAAATGTGATTTAAAGTTGTGCTTAAATTCATATCACTAAAGGCTGACAGTCGCTTACTGAGGTTTACTAGTTTAGTTGGGCTATGGAGTTCCCATTATGTTGTGGGATGATTGTTGGACTGACAATAACCTTCATAATCAAGTTTGTCCTTAGGCTACACCTTGATAGATTCAAAAGAAAACAGAATGTTTGGACAAAAAACACATTGGGTTTGAACCTCAACTAAAGAGTACTTTTGTTGCGAAAGAATCAATGAAATGGCTTCAATACAAGATCGCTATTTATTTAGAGTATTCAAGGATATTTAGCTCATATATGTACTGGGACTCTCGTTTTTGTTTTTATGCGTAGTTTAGGATGTACTTTTATTATTCTGTAATCTAGAGTTTGTTTTTCAAGGGAAAAAAAATGTCTCCATGTTCTATGTCTCAGGTGAGTGATGATGAAGTTGAAACTATTCTCCCTGCTGCTGCTTATGCTCTTGCCAAAATACACATGCATTTGGTACACAGCGGGTACGATATATTTTATGCCTTCATTTAAATTTTATGAAAACAATTGCATACTATCTTGATACATCATATGATTTCGTGATATCTTGTTAGATTTTGCTATACAGCGAGGGGAGGATTTTGCTATTCAGAAGAGGACATCTTTGA

mRNA sequence

AGCATCTAACTTCAAAATGGTCGGCCAAACATCCCTATATTTCCCCCCCTTCCTCTATACTCACACCGGCACTCCCTCTATGCTATCTCCCTATACGCTACAACCGCGCCAGCAGCCACGACTATCCAGTCTTCTTCTGCTCGTTTCCAAACCCCGCCCACACTCTTTCTTCCGCAGGGGAGGAGCGACGAACGAGTAAGCATGGCGCTGTGTATCTCTATTCCTTCCTTCTTGGATTCTGTTACTGCTTCTTCGCTATCTCGCACGTATTTTAGCCTCAGACGGCGGCCTTCCAATTCCGTCCATTTTCTTAACTTGAACCTTCCCACCTGGCCACTGTGTATTTGCCGAGCTTCCAATTCTCAACCTGGACCGTCGCCCAAACAGTCTGCCTCCACCGCTTCTAAGAAGAGGAAGAAAAAGGGTAAGGGAGATACCAAGGTTTTCAATCCTAGAGACATTGAAGTTGGGGACGATTTTAGTGTCGATGAGGCTGGACCCTCGAGCTCTACTTCCAATTCCAGTTATTTGTCGTACCACCCGACGACGTTGCCGAAACCGCCAGCTGGGTTTGTGTTAGATGACCATGGAAAGGTCCTCATGGCTTCAAACAAGCGAATTGCTACCATGGTCGATCCTTTAAATAACTTGCCTTTAGAATGCGTTATAAGAAGAATTTTTAGAAGTTCAAAAGGGGATGAGTGCATGCTGCTTTGCCCTGTGGACACGCCTGTTCAAATATTGAAGAGCAAGAATATTGACGGATGGTCAGCTGTGAGTGATGATGAAGTTGAAACTATTCTCCCTGCTGCTGCTTATGCTCTTGCCAAAATACACATGCATTTGGTACACAGCGGCGAGGGGAGGATTTTGCTATTCAGAAGAGGACATCTTTGA

Coding sequence (CDS)

ATGGCGCTGTGTATCTCTATTCCTTCCTTCTTGGATTCTGTTACTGCTTCTTCGCTATCTCGCACGTATTTTAGCCTCAGACGGCGGCCTTCCAATTCCGTCCATTTTCTTAACTTGAACCTTCCCACCTGGCCACTGTGTATTTGCCGAGCTTCCAATTCTCAACCTGGACCGTCGCCCAAACAGTCTGCCTCCACCGCTTCTAAGAAGAGGAAGAAAAAGGGTAAGGGAGATACCAAGGTTTTCAATCCTAGAGACATTGAAGTTGGGGACGATTTTAGTGTCGATGAGGCTGGACCCTCGAGCTCTACTTCCAATTCCAGTTATTTGTCGTACCACCCGACGACGTTGCCGAAACCGCCAGCTGGGTTTGTGTTAGATGACCATGGAAAGGTCCTCATGGCTTCAAACAAGCGAATTGCTACCATGGTCGATCCTTTAAATAACTTGCCTTTAGAATGCGTTATAAGAAGAATTTTTAGAAGTTCAAAAGGGGATGAGTGCATGCTGCTTTGCCCTGTGGACACGCCTGTTCAAATATTGAAGAGCAAGAATATTGACGGATGGTCAGCTGTGAGTGATGATGAAGTTGAAACTATTCTCCCTGCTGCTGCTTATGCTCTTGCCAAAATACACATGCATTTGGTACACAGCGGCGAGGGGAGGATTTTGCTATTCAGAAGAGGACATCTTTGA

Protein sequence

MALCISIPSFLDSVTASSLSRTYFSLRRRPSNSVHFLNLNLPTWPLCICRASNSQPGPSPKQSASTASKKRKKKGKGDTKVFNPRDIEVGDDFSVDEAGPSSSTSNSSYLSYHPTTLPKPPAGFVLDDHGKVLMASNKRIATMVDPLNNLPLECVIRRIFRSSKGDECMLLCPVDTPVQILKSKNIDGWSAVSDDEVETILPAAAYALAKIHMHLVHSGEGRILLFRRGHL
Homology
[Close]
BLAST of CmoCh20G010290 vs. ExPASy TrEMBL
Match: A0A6J1EW11 (uncharacterized protein LOC111438664 OS=Cucurbita moschata OX=3662 GN=LOC111438664 PE=4 SV=1)

HSP 1 Score: 438.3 bits (1126), Expect = 1.9e-119
Identity = 219/219 (100.00%), Postives = 219/219 (100.00%), Query Frame = 0 

Query: 1   MALCISIPSFLDSVTASSLSRTYFSLRRRPSNSVHFLNLNLPTWPLCICRASNSQPGPSP 60
           MALCISIPSFLDSVTASSLSRTYFSLRRRPSNSVHFLNLNLPTWPLCICRASNSQPGPSP
Sbjct: 1   MALCISIPSFLDSVTASSLSRTYFSLRRRPSNSVHFLNLNLPTWPLCICRASNSQPGPSP 60

Query: 61  KQSASTASKKRKKKGKGDTKVFNPRDIEVGDDFSVDEAGPSSSTSNSSYLSYHPTTLPKP 120
           KQSASTASKKRKKKGKGDTKVFNPRDIEVGDDFSVDEAGPSSSTSNSSYLSYHPTTLPKP
Sbjct: 61  KQSASTASKKRKKKGKGDTKVFNPRDIEVGDDFSVDEAGPSSSTSNSSYLSYHPTTLPKP 120

Query: 121 PAGFVLDDHGKVLMASNKRIATMVDPLNNLPLECVIRRIFRSSKGDECMLLCPVDTPVQI 180
           PAGFVLDDHGKVLMASNKRIATMVDPLNNLPLECVIRRIFRSSKGDECMLLCPVDTPVQI
Sbjct: 121 PAGFVLDDHGKVLMASNKRIATMVDPLNNLPLECVIRRIFRSSKGDECMLLCPVDTPVQI 180

Query: 181 LKSKNIDGWSAVSDDEVETILPAAAYALAKIHMHLVHSG 220
           LKSKNIDGWSAVSDDEVETILPAAAYALAKIHMHLVHSG
Sbjct: 181 LKSKNIDGWSAVSDDEVETILPAAAYALAKIHMHLVHSG 219

[Close]
BLAST of CmoCh20G010290 vs. ExPASy TrEMBL
Match: A0A6J1I6V6 (uncharacterized protein LOC111471694 OS=Cucurbita maxima OX=3661 GN=LOC111471694 PE=4 SV=1)

HSP 1 Score: 431.8 bits (1109), Expect = 1.8e-117
Identity = 216/219 (98.63%), Postives = 218/219 (99.54%), Query Frame = 0 

Query: 1   MALCISIPSFLDSVTASSLSRTYFSLRRRPSNSVHFLNLNLPTWPLCICRASNSQPGPSP 60
           MALCISIPSFLDSVTASSLSRTYFSLRRRPSNSVHFLNL+LPTWPLCICRASNSQPGPSP
Sbjct: 1   MALCISIPSFLDSVTASSLSRTYFSLRRRPSNSVHFLNLSLPTWPLCICRASNSQPGPSP 60

Query: 61  KQSASTASKKRKKKGKGDTKVFNPRDIEVGDDFSVDEAGPSSSTSNSSYLSYHPTTLPKP 120
           KQSASTASKKRKKKGKGDTKVFN RDIEVGDDFSVDEAGPSSSTSNSSYLSYHPTTLPKP
Sbjct: 61  KQSASTASKKRKKKGKGDTKVFNHRDIEVGDDFSVDEAGPSSSTSNSSYLSYHPTTLPKP 120

Query: 121 PAGFVLDDHGKVLMASNKRIATMVDPLNNLPLECVIRRIFRSSKGDECMLLCPVDTPVQI 180
           PAGFVLDDHGKVLMASNKRIATM+DPLNNLPLECVIRRIFRSSKGDECMLLCPVDTPVQI
Sbjct: 121 PAGFVLDDHGKVLMASNKRIATMLDPLNNLPLECVIRRIFRSSKGDECMLLCPVDTPVQI 180

Query: 181 LKSKNIDGWSAVSDDEVETILPAAAYALAKIHMHLVHSG 220
           LKSKNIDGWSAVSDDEVETILPAAAYALAKIHMHLVHSG
Sbjct: 181 LKSKNIDGWSAVSDDEVETILPAAAYALAKIHMHLVHSG 219

[Close]
BLAST of CmoCh20G010290 vs. ExPASy TrEMBL
Match: A0A1S4E324 (uncharacterized protein LOC103499586 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499586 PE=4 SV=1)

HSP 1 Score: 382.1 bits (980), Expect = 1.6e-102
Identity = 192/220 (87.27%), Postives = 204/220 (92.73%), Query Frame = 0 

Query: 1   MALCISIPSFLDSVTASSLSRTYFSL-RRRPSNSVHFLNLNLPTWPLCICRASNSQPGPS 60
           MALCISIPSF DSVTA SLS+TYFSL RRRPSN +HFLNL+LP  P C+CRASNSQPGP 
Sbjct: 1   MALCISIPSFSDSVTAPSLSQTYFSLSRRRPSNFIHFLNLSLPNRPPCLCRASNSQPGPF 60

Query: 61  PKQSASTASKKRKKKGKGDTKVFNPRDIEVGDDFSVDEAGPSSSTSNSSYLSYHPTTLPK 120
           PKQSAS +SKKRKKK KGD+KVFNP + EV DDFS D+AGPSSSTS S+YLSYHP+TLPK
Sbjct: 61  PKQSASASSKKRKKKDKGDSKVFNPNNFEVVDDFSFDDAGPSSSTSTSTYLSYHPSTLPK 120

Query: 121 PPAGFVLDDHGKVLMASNKRIATMVDPLNNLPLECVIRRIFRSSKGDECMLLCPVDTPVQ 180
           PPAGFVLDDHGKVLMASNKRIATMVDPLNNLPLECVIRRIFRSSKGD+CMLLCPVDTPVQ
Sbjct: 121 PPAGFVLDDHGKVLMASNKRIATMVDPLNNLPLECVIRRIFRSSKGDDCMLLCPVDTPVQ 180

Query: 181 ILKSKNIDGWSAVSDDEVETILPAAAYALAKIHMHLVHSG 220
           ILKSKNIDGWSAVSDDEVE +LPAAAYALAKIHMHLVHSG
Sbjct: 181 ILKSKNIDGWSAVSDDEVEALLPAAAYALAKIHMHLVHSG 220

[Close]
BLAST of CmoCh20G010290 vs. ExPASy TrEMBL
Match: A0A1S4E3T2 (uncharacterized protein LOC103499586 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103499586 PE=4 SV=1)

HSP 1 Score: 382.1 bits (980), Expect = 1.6e-102
Identity = 192/220 (87.27%), Postives = 204/220 (92.73%), Query Frame = 0 

Query: 1   MALCISIPSFLDSVTASSLSRTYFSL-RRRPSNSVHFLNLNLPTWPLCICRASNSQPGPS 60
           MALCISIPSF DSVTA SLS+TYFSL RRRPSN +HFLNL+LP  P C+CRASNSQPGP 
Sbjct: 1   MALCISIPSFSDSVTAPSLSQTYFSLSRRRPSNFIHFLNLSLPNRPPCLCRASNSQPGPF 60

Query: 61  PKQSASTASKKRKKKGKGDTKVFNPRDIEVGDDFSVDEAGPSSSTSNSSYLSYHPTTLPK 120
           PKQSAS +SKKRKKK KGD+KVFNP + EV DDFS D+AGPSSSTS S+YLSYHP+TLPK
Sbjct: 61  PKQSASASSKKRKKKDKGDSKVFNPNNFEVVDDFSFDDAGPSSSTSTSTYLSYHPSTLPK 120

Query: 121 PPAGFVLDDHGKVLMASNKRIATMVDPLNNLPLECVIRRIFRSSKGDECMLLCPVDTPVQ 180
           PPAGFVLDDHGKVLMASNKRIATMVDPLNNLPLECVIRRIFRSSKGD+CMLLCPVDTPVQ
Sbjct: 121 PPAGFVLDDHGKVLMASNKRIATMVDPLNNLPLECVIRRIFRSSKGDDCMLLCPVDTPVQ 180

Query: 181 ILKSKNIDGWSAVSDDEVETILPAAAYALAKIHMHLVHSG 220
           ILKSKNIDGWSAVSDDEVE +LPAAAYALAKIHMHLVHSG
Sbjct: 181 ILKSKNIDGWSAVSDDEVEALLPAAAYALAKIHMHLVHSG 220

[Close]
BLAST of CmoCh20G010290 vs. ExPASy TrEMBL
Match: A0A6J1DU07 (uncharacterized protein LOC111024390 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111024390 PE=4 SV=1)

HSP 1 Score: 356.7 bits (914), Expect = 7.4e-95
Identity = 181/219 (82.65%), Postives = 194/219 (88.58%), Query Frame = 0 

Query: 3   LCISIPSFLDSVTASSLSRTYFSLRRR--PSNSVHFLNLNLPTWPLCICRASNSQPGPSP 62
           L ISIPS  DS  A SL  T+ SL+ R  PSNS+HFLN + PT   C+CRA+NSQPGP P
Sbjct: 4   LSISIPSLSDSTAAPSLFHTFSSLKWRPSPSNSIHFLNPSSPTLRPCLCRAANSQPGPLP 63

Query: 63  KQSASTASKKRKKKGKGDTKVFNPRDIEVGDDFSVDEAGPSSSTSNSSYLSYHPTTLPKP 122
           KQS+S A KKRKKKGKGDTKVFNP D+E  +DFSVDEAGPSSS+S+SSYLSYHPTTLPKP
Sbjct: 64  KQSSSAAPKKRKKKGKGDTKVFNPSDLEAVEDFSVDEAGPSSSSSDSSYLSYHPTTLPKP 123

Query: 123 PAGFVLDDHGKVLMASNKRIATMVDPLNNLPLECVIRRIFRSSKGDECMLLCPVDTPVQI 182
           PAGFVLDDHGKVLMAS KRIATMVDPLNNLPLECVIRR+FRSSKGDECMLLCP+DTPVQI
Sbjct: 124 PAGFVLDDHGKVLMASTKRIATMVDPLNNLPLECVIRRVFRSSKGDECMLLCPMDTPVQI 183

Query: 183 LKSKNIDGWSAVSDDEVETILPAAAYALAKIHMHLVHSG 220
           LKSKNIDGWSAVSDDEVE ILPAAAYALAKIHMHLVHSG
Sbjct: 184 LKSKNIDGWSAVSDDEVEAILPAAAYALAKIHMHLVHSG 222

[Close]
BLAST of CmoCh20G010290 vs. NCBI nr
Match: XP_022932311.1 (uncharacterized protein LOC111438664 [Cucurbita moschata])

HSP 1 Score: 438.3 bits (1126), Expect = 4.0e-119
Identity = 219/219 (100.00%), Postives = 219/219 (100.00%), Query Frame = 0 

Query: 1   MALCISIPSFLDSVTASSLSRTYFSLRRRPSNSVHFLNLNLPTWPLCICRASNSQPGPSP 60
           MALCISIPSFLDSVTASSLSRTYFSLRRRPSNSVHFLNLNLPTWPLCICRASNSQPGPSP
Sbjct: 1   MALCISIPSFLDSVTASSLSRTYFSLRRRPSNSVHFLNLNLPTWPLCICRASNSQPGPSP 60

Query: 61  KQSASTASKKRKKKGKGDTKVFNPRDIEVGDDFSVDEAGPSSSTSNSSYLSYHPTTLPKP 120
           KQSASTASKKRKKKGKGDTKVFNPRDIEVGDDFSVDEAGPSSSTSNSSYLSYHPTTLPKP
Sbjct: 61  KQSASTASKKRKKKGKGDTKVFNPRDIEVGDDFSVDEAGPSSSTSNSSYLSYHPTTLPKP 120

Query: 121 PAGFVLDDHGKVLMASNKRIATMVDPLNNLPLECVIRRIFRSSKGDECMLLCPVDTPVQI 180
           PAGFVLDDHGKVLMASNKRIATMVDPLNNLPLECVIRRIFRSSKGDECMLLCPVDTPVQI
Sbjct: 121 PAGFVLDDHGKVLMASNKRIATMVDPLNNLPLECVIRRIFRSSKGDECMLLCPVDTPVQI 180

Query: 181 LKSKNIDGWSAVSDDEVETILPAAAYALAKIHMHLVHSG 220
           LKSKNIDGWSAVSDDEVETILPAAAYALAKIHMHLVHSG
Sbjct: 181 LKSKNIDGWSAVSDDEVETILPAAAYALAKIHMHLVHSG 219

[Close]
BLAST of CmoCh20G010290 vs. NCBI nr
Match: KAG6571304.1 (hypothetical protein SDJN03_30219, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 436.4 bits (1121), Expect = 1.5e-118
Identity = 218/219 (99.54%), Postives = 219/219 (100.00%), Query Frame = 0 

Query: 1   MALCISIPSFLDSVTASSLSRTYFSLRRRPSNSVHFLNLNLPTWPLCICRASNSQPGPSP 60
           MALCISIPSFLDSVTASSLSRTYFSLRRRPSNSVHFLNL+LPTWPLCICRASNSQPGPSP
Sbjct: 68  MALCISIPSFLDSVTASSLSRTYFSLRRRPSNSVHFLNLSLPTWPLCICRASNSQPGPSP 127

Query: 61  KQSASTASKKRKKKGKGDTKVFNPRDIEVGDDFSVDEAGPSSSTSNSSYLSYHPTTLPKP 120
           KQSASTASKKRKKKGKGDTKVFNPRDIEVGDDFSVDEAGPSSSTSNSSYLSYHPTTLPKP
Sbjct: 128 KQSASTASKKRKKKGKGDTKVFNPRDIEVGDDFSVDEAGPSSSTSNSSYLSYHPTTLPKP 187

Query: 121 PAGFVLDDHGKVLMASNKRIATMVDPLNNLPLECVIRRIFRSSKGDECMLLCPVDTPVQI 180
           PAGFVLDDHGKVLMASNKRIATMVDPLNNLPLECVIRRIFRSSKGDECMLLCPVDTPVQI
Sbjct: 188 PAGFVLDDHGKVLMASNKRIATMVDPLNNLPLECVIRRIFRSSKGDECMLLCPVDTPVQI 247

Query: 181 LKSKNIDGWSAVSDDEVETILPAAAYALAKIHMHLVHSG 220
           LKSKNIDGWSAVSDDEVETILPAAAYALAKIHMHLVHSG
Sbjct: 248 LKSKNIDGWSAVSDDEVETILPAAAYALAKIHMHLVHSG 286

[Close]
BLAST of CmoCh20G010290 vs. NCBI nr
Match: XP_022973192.1 (uncharacterized protein LOC111471694 [Cucurbita maxima])

HSP 1 Score: 431.8 bits (1109), Expect = 3.7e-117
Identity = 216/219 (98.63%), Postives = 218/219 (99.54%), Query Frame = 0 

Query: 1   MALCISIPSFLDSVTASSLSRTYFSLRRRPSNSVHFLNLNLPTWPLCICRASNSQPGPSP 60
           MALCISIPSFLDSVTASSLSRTYFSLRRRPSNSVHFLNL+LPTWPLCICRASNSQPGPSP
Sbjct: 1   MALCISIPSFLDSVTASSLSRTYFSLRRRPSNSVHFLNLSLPTWPLCICRASNSQPGPSP 60

Query: 61  KQSASTASKKRKKKGKGDTKVFNPRDIEVGDDFSVDEAGPSSSTSNSSYLSYHPTTLPKP 120
           KQSASTASKKRKKKGKGDTKVFN RDIEVGDDFSVDEAGPSSSTSNSSYLSYHPTTLPKP
Sbjct: 61  KQSASTASKKRKKKGKGDTKVFNHRDIEVGDDFSVDEAGPSSSTSNSSYLSYHPTTLPKP 120

Query: 121 PAGFVLDDHGKVLMASNKRIATMVDPLNNLPLECVIRRIFRSSKGDECMLLCPVDTPVQI 180
           PAGFVLDDHGKVLMASNKRIATM+DPLNNLPLECVIRRIFRSSKGDECMLLCPVDTPVQI
Sbjct: 121 PAGFVLDDHGKVLMASNKRIATMLDPLNNLPLECVIRRIFRSSKGDECMLLCPVDTPVQI 180

Query: 181 LKSKNIDGWSAVSDDEVETILPAAAYALAKIHMHLVHSG 220
           LKSKNIDGWSAVSDDEVETILPAAAYALAKIHMHLVHSG
Sbjct: 181 LKSKNIDGWSAVSDDEVETILPAAAYALAKIHMHLVHSG 219

[Close]
BLAST of CmoCh20G010290 vs. NCBI nr
Match: XP_023512665.1 (uncharacterized protein LOC111777348 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 427.9 bits (1099), Expect = 5.4e-116
Identity = 215/219 (98.17%), Postives = 216/219 (98.63%), Query Frame = 0 

Query: 1   MALCISIPSFLDSVTASSLSRTYFSLRRRPSNSVHFLNLNLPTWPLCICRASNSQPGPSP 60
           MALCISIPSFLDSVTASSLSR YFSLRRRPSNSV FLNL+LPTWPLCICRASNSQPGPSP
Sbjct: 1   MALCISIPSFLDSVTASSLSRKYFSLRRRPSNSVRFLNLSLPTWPLCICRASNSQPGPSP 60

Query: 61  KQSASTASKKRKKKGKGDTKVFNPRDIEVGDDFSVDEAGPSSSTSNSSYLSYHPTTLPKP 120
           KQSASTASKKRKKKGKGDTKVFNPRDIEV DDFSVDEAGPSSSTSNSSYLSYHPTTLPKP
Sbjct: 61  KQSASTASKKRKKKGKGDTKVFNPRDIEVEDDFSVDEAGPSSSTSNSSYLSYHPTTLPKP 120

Query: 121 PAGFVLDDHGKVLMASNKRIATMVDPLNNLPLECVIRRIFRSSKGDECMLLCPVDTPVQI 180
           PAGFVLDDHGKVLMASNKRIATMVDPLNNLPLECVIRRIFRSSKGDECMLLCPVDTPVQI
Sbjct: 121 PAGFVLDDHGKVLMASNKRIATMVDPLNNLPLECVIRRIFRSSKGDECMLLCPVDTPVQI 180

Query: 181 LKSKNIDGWSAVSDDEVETILPAAAYALAKIHMHLVHSG 220
           LKSKNIDGWSAVSDDEVETILPAAAYALAKIHMHLVHSG
Sbjct: 181 LKSKNIDGWSAVSDDEVETILPAAAYALAKIHMHLVHSG 219

[Close]
BLAST of CmoCh20G010290 vs. NCBI nr
Match: XP_038900637.1 (uncharacterized protein LOC120087801 isoform X2 [Benincasa hispida])

HSP 1 Score: 388.7 bits (997), Expect = 3.6e-104
Identity = 195/221 (88.24%), Postives = 206/221 (93.21%), Query Frame = 0 

Query: 1   MALCISIPSFLDSVTASSLSRTYFSLRRRPSNSVHFLNLNLPTWPLCICRASNSQPGPSP 60
           MALCISIPSF DSVTA SLS+TYFSL RRPSNS+HFLNL LPT P C+CRASNSQPGP P
Sbjct: 1   MALCISIPSFSDSVTAPSLSQTYFSLTRRPSNSIHFLNLRLPTRPPCLCRASNSQPGPLP 60

Query: 61  KQSASTASKKRKKKGKGDTKVFNPRDIEVGDDFSVDEAGPSSS--TSNSSYLSYHPTTLP 120
           K S ST+SKKRKKKGKGDTKVFNP D+EV DDF+VDEAGPSSS  +S+SSYLSYHP+TLP
Sbjct: 61  KHSVSTSSKKRKKKGKGDTKVFNPTDVEVVDDFTVDEAGPSSSSASSSSSYLSYHPSTLP 120

Query: 121 KPPAGFVLDDHGKVLMASNKRIATMVDPLNNLPLECVIRRIFRSSKGDECMLLCPVDTPV 180
           KPPAGFVLDDHGKVLMASNKRIA MVDPLNNLPLECVIRRIFRSSKGDECMLLCPVDTPV
Sbjct: 121 KPPAGFVLDDHGKVLMASNKRIAIMVDPLNNLPLECVIRRIFRSSKGDECMLLCPVDTPV 180

Query: 181 QILKSKNIDGWSAVSDDEVETILPAAAYALAKIHMHLVHSG 220
           QILKSKN+DGWSAVSDDEVE ILPAA+YALAKIHMHLVHSG
Sbjct: 181 QILKSKNVDGWSAVSDDEVEAILPAASYALAKIHMHLVHSG 221

[Close]
BLAST of CmoCh20G010290 vs. TAIR 10
Match: AT4G33480.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3727 (InterPro:IPR022203); Has 348 Blast hits to 348 proteins in 78 species: Archae - 0; Bacteria - 101; Metazoa - 0; Fungi - 0; Plants - 183; Viruses - 0; Other Eukaryotes - 64 (source: NCBI BLink). )

HSP 1 Score: 201.4 bits (511), Expect = 7.6e-52
Identity = 111/181 (61.33%), Postives = 134/181 (74.03%), Query Frame = 0 

Query: 46  LCICRASNSQPGPSPKQSA-----STASKKRKKKGKGDTKV--FNPRDIEVGDDFSVDEA 105
           L I  A N Q G   K+++     S+ +KKRKKKGK    V  +  RD E  D F  D+ 
Sbjct: 48  LLITSALNPQTGQPTKKASTGSDKSSTNKKRKKKGKIAKPVEDWELRDSE--DAFEEDDD 107

Query: 106 GPSSSTSNSSYLSYHPTTLPKPPAGFVLDDHGKVLMASNKRIATMVDPLNNLPLECVIRR 165
              SS+S+S      P T+PKPPAGFV+++ G+VLMAS KRI T++DP NN PL+CVIRR
Sbjct: 108 ADYSSSSSSLATFNSPPTIPKPPAGFVINETGRVLMASKKRITTVIDPTNNSPLDCVIRR 167

Query: 166 IFRSSKGDECMLLCPVDTPVQILKSKNIDGWSAVSDDEVETILPAAAYALAKIHMHLVHS 220
           +F SSKG++CMLLCPVDTPVQILKS NIDGWSAVSD+EVE++LPAAAYALAKIHMHLVHS
Sbjct: 168 VFTSSKGEDCMLLCPVDTPVQILKSTNIDGWSAVSDEEVESLLPAAAYALAKIHMHLVHS 226

The following BLAST results are available for this feature:
BLAST of CmoCh20G010290 vs.
Match NameE-valueIdentityDescription
BLAST of CmoCh20G010290 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1EW111.9e-119100.00uncharacterized protein LOC111438664 OS=Cucurbita moschata OX=3662 GN=LOC1114386... [more]
A0A6J1I6V61.8e-11798.63uncharacterized protein LOC111471694 OS=Cucurbita maxima OX=3661 GN=LOC111471694... [more]
A0A1S4E3241.6e-10287.27uncharacterized protein LOC103499586 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A1S4E3T21.6e-10287.27uncharacterized protein LOC103499586 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A6J1DU077.4e-9582.65uncharacterized protein LOC111024390 isoform X2 OS=Momordica charantia OX=3673 G... [more]
BLAST of CmoCh20G010290 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022932311.14.0e-119100.00uncharacterized protein LOC111438664 [Cucurbita moschata][more]
KAG6571304.11.5e-11899.54hypothetical protein SDJN03_30219, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022973192.13.7e-11798.63uncharacterized protein LOC111471694 [Cucurbita maxima][more]
XP_023512665.15.4e-11698.17uncharacterized protein LOC111777348 [Cucurbita pepo subsp. pepo][more]
XP_038900637.13.6e-10488.24uncharacterized protein LOC120087801 isoform X2 [Benincasa hispida][more]
BLAST of CmoCh20G010290 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G33480.17.6e-5261.33unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 97..112
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 53..112
NoneNo IPR availablePANTHERPTHR36061FAMILY NOT NAMEDcoord: 44..219

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh20G010290.1CmoCh20G010290.1mRNA