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CmoCh20G010070 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTCAATCCAGTGTCGTTTTGAGTTGGTGTTCTGTTTTTAGGCAAAAATCTGAAGATCTACTTGTTCCATGATCCATTTGTAAGGCCCCCAACATTCTCGGAACCAGAAAAACAGCAAGAAATTTCTGAGCATTCAAAATTCTCCTCTCTCTCTCTCTCTCGTAGATCTCCCATGGCGGACGAATCTTACTGTAAACACAATTTGAAGATGGCAATGTTAAACCATGAACACACATTTCGTCACCAAGTACCTTTTCTTCTTCTTCTTCCTCTTTCTCCACTTCCCTTTGTCTCGTCTTTCCTTTTGTTTAACAGCGGCCAGAGGCTTTTTTTGTTGCAGGTTTATGAGCTCCACCGATTGTACAGAATTCAGAAGGTTTTGATGAAGAACATAGCTGAAAACAGGGGAAAAACAGAGGAGGAAGAAGAAGAAGAAGGTGAAGAGATTGAGTTTATTCAGGAAAGTGAGATTGAATTGACATTGGGGCCTTCCAGTTATAGTAATCAAGTTGGAGGGAGGAGAAGGAGGAGAAAGAAATTGGGTGAATTAATGAAAGGAGGTTCCGATTCTTCCTCCTCCTCGACCACTGGATCTGCGCCTAAAGGTGGAATTCTTTATCGAGATGGCGAGTTTCTGGGATTTCTCGAGCTTCAAGATGAAACCCGGCTTGCTCAACACCATCCAAATCCATGGCTTTGTCAAGTTGTAAGCCTTAATCTCACTTGATTTTCATTTTTTATGTTTATTGATTGATTTTGTTTTTCTAGTTTTTATAATTCCCTTGTCATTGGCTGATTGAGAGCCTTATCTGTGTACAAGTTTATAACCGAGTTAATATCATTATCACCCGCCC ATTCAATCCAGTGTCGTTTTGAGTTGGTGTTCTGTTTTTAGGCAAAAATCTGAAGATCTACTTGTTCCATGATCCATTTGTAAGGCCCCCAACATTCTCGGAACCAGAAAAACAGCAAGAAATTTCTGAGCATTCAAAATTCTCCTCTCTCTCTCTCTCTCGTAGATCTCCCATGGCGGACGAATCTTACTGTAAACACAATTTGAAGATGGCAATGTTAAACCATGAACACACATTTCGTCACCAAGTTTATGAGCTCCACCGATTGTACAGAATTCAGAAGGTTTTGATGAAGAACATAGCTGAAAACAGGGGAAAAACAGAGGAGGAAGAAGAAGAAGAAGGTGAAGAGATTGAGTTTATTCAGGAAAGTGAGATTGAATTGACATTGGGGCCTTCCAGTTATAGTAATCAAGTTGGAGGGAGGAGAAGGAGGAGAAAGAAATTGGGTGAATTAATGAAAGGAGGTTCCGATTCTTCCTCCTCCTCGACCACTGGATCTGCGCCTAAAGGTGGAATTCTTTATCGAGATGGCGAGTTTCTGGGATTTCTCGAGCTTCAAGATGAAACCCGGCTTGCTCAACACCATCCAAATCCATGGCTTTGTCAAGTTGTAAGCCTTAATCTCACTTGATTTTCATTTTTTATGTTTATTGATTGATTTTGTTTTTCTAGTTTTTATAATTCCCTTGTCATTGGCTGATTGAGAGCCTTATCTGTGTACAAGTTTATAACCGAGTTAATATCATTATCACCCGCCC ATGGCGGACGAATCTTACTGTAAACACAATTTGAAGATGGCAATGTTAAACCATGAACACACATTTCGTCACCAAGTTTATGAGCTCCACCGATTGTACAGAATTCAGAAGGTTTTGATGAAGAACATAGCTGAAAACAGGGGAAAAACAGAGGAGGAAGAAGAAGAAGAAGGTGAAGAGATTGAGTTTATTCAGGAAAGTGAGATTGAATTGACATTGGGGCCTTCCAGTTATAGTAATCAAGTTGGAGGGAGGAGAAGGAGGAGAAAGAAATTGGGTGAATTAATGAAAGGAGGTTCCGATTCTTCCTCCTCCTCGACCACTGGATCTGCGCCTAAAGGTGGAATTCTTTATCGAGATGGCGAGTTTCTGGGATTTCTCGAGCTTCAAGATGAAACCCGGCTTGCTCAACACCATCCAAATCCATGGCTTTGTCAAGTTGTAAGCCTTAATCTCACTTGA MADESYCKHNLKMAMLNHEHTFRHQVYELHRLYRIQKVLMKNIAENRGKTEEEEEEEGEEIEFIQESEIELTLGPSSYSNQVGGRRRRRKKLGELMKGGSDSSSSSTTGSAPKGGILYRDGEFLGFLELQDETRLAQHHPNPWLCQVVSLNLT Homology
BLAST of CmoCh20G010070 vs. ExPASy TrEMBL
Match: A0A6J1EXP9 (uncharacterized protein LOC111439473 OS=Cucurbita moschata OX=3662 GN=LOC111439473 PE=4 SV=1) HSP 1 Score: 303.5 bits (776), Expect = 4.9e-79 Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 0
BLAST of CmoCh20G010070 vs. ExPASy TrEMBL
Match: A0A6J1J5Z3 (uncharacterized protein LOC111483758 OS=Cucurbita maxima OX=3661 GN=LOC111483758 PE=4 SV=1) HSP 1 Score: 292.7 bits (748), Expect = 8.7e-76 Identity = 147/153 (96.08%), Postives = 150/153 (98.04%), Query Frame = 0
BLAST of CmoCh20G010070 vs. ExPASy TrEMBL
Match: A0A1S3C5U9 (uncharacterized protein LOC103497380 OS=Cucumis melo OX=3656 GN=LOC103497380 PE=4 SV=1) HSP 1 Score: 192.6 bits (488), Expect = 1.2e-45 Identity = 115/174 (66.09%), Postives = 130/174 (74.71%), Query Frame = 0
BLAST of CmoCh20G010070 vs. ExPASy TrEMBL
Match: A0A0A0LJL7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G277640 PE=4 SV=1) HSP 1 Score: 190.3 bits (482), Expect = 6.1e-45 Identity = 114/174 (65.52%), Postives = 129/174 (74.14%), Query Frame = 0
BLAST of CmoCh20G010070 vs. ExPASy TrEMBL
Match: A0A6J1G6V7 (uncharacterized protein LOC111451410 OS=Cucurbita moschata OX=3662 GN=LOC111451410 PE=4 SV=1) HSP 1 Score: 183.7 bits (465), Expect = 5.7e-43 Identity = 104/163 (63.80%), Postives = 120/163 (73.62%), Query Frame = 0
BLAST of CmoCh20G010070 vs. TAIR 10
Match: AT5G67390.1 (unknown protein; BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF863) (TAIR:AT1G69360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 84.3 bits (207), Expect = 9.0e-17 Identity = 65/176 (36.93%), Postives = 87/176 (49.43%), Query Frame = 0
BLAST of CmoCh20G010070 vs. TAIR 10
Match: AT5G67390.2 (unknown protein; BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF863) (TAIR:AT1G69360.1); Has 186 Blast hits to 186 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 170; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). ) HSP 1 Score: 84.3 bits (207), Expect = 9.0e-17 Identity = 65/176 (36.93%), Postives = 87/176 (49.43%), Query Frame = 0
BLAST of CmoCh20G010070 vs. TAIR 10
Match: AT1G69360.1 (Plant protein of unknown function (DUF863) ) HSP 1 Score: 47.8 bits (112), Expect = 9.4e-06 Identity = 27/46 (58.70%), Postives = 32/46 (69.57%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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