
CmoCh20G009920 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTTCTTGCAAAGAGCAATGATGTCCAGCTTGGTACGATGGCTTCCATTTTTTACCGGATGGAATTTCTTTACTAGTTATTTCTTCTAATATCTTGAATTTCTGCACAGGGGACTTTAGACTTGCAAAACTACTCAATATAGAAGACCTTGCTTCATCATCATCGGTAAGGATGCAATCATTGTCTTGTCATAATTTCTTAGTAGAGATGATTTAAAGAAATTATGTGGGGATAATTTTCCTGAATGGATCTTCTTCTCCGCTTATGAGCAGGTTACTTTTCCTTTTCTTTTTATGTTTCTCCTTTTACTCTTTGTTGATCATTATTGTTGTGTTGTTCTATAATTTAGAATGATGATACCTGTGATGGAAGAATGATAAGTTACTTTTTGTTTGTTTTAACATTAATGGTAATTCTGGAAATATCGGAGATGATGTTACTCGATATGATAGCTTTCCAGTGTGATGCATGGACGCTCCTTCTTTTCTCCAGTTTAATAGACACATTGATGTACTTGGGTCAAGAACAACTGGATACCTTAAGCGCAATCTTTTCAATAACCAAAGTAGCCATCGGGCCTTTATCAAAGACACAAAGACAGCTATTAGTAAGAAGTTATAATTTGTGCCTATGATTTCATATTTTCCTGTTGCCTGACAAGTGGAGCATAAACTAAGCAAATACTTATTTTGCAGCAGAGGTTTTTAAACATGCAAACTATATTAAAGAAGATAGAGGCCAGCAGAAAGATGTCGGGTCAACTGCTGTCCTATTAGGGGATCGTCTCTTTGTTGCTAATGTTGAATAGTCCAGAATAGTTGTATCTAGAGTTGGTTCAGGTTGCCTATTATTTTTTTTTCTGTCAATAGATGATTTTGGGATAGAGGACTTGCACTTCAAAGTCGTGACATGATAACGGTTCCTTGAAAATCATTGCAAGTAGTGGAGAATATTTTATCTTGTATAGTTTGTATAACTTTATTTTAGGAAATGATGGAATACTACTCTTGTAATGGAAATAGATTATGAAATCTCAATTATGAACGGAAGTCATGG ATGTTTCTTGCAAAGAGCAATGATGTCCAGCTTGGGGACTTTAGACTTGCAAAACTACTCAATATAGAAGACCTTGCTTCATCATCATCGTTTAATAGACACATTGATGTACTTGGGTCAAGAACAACTGGATACCTTAAGCGCAATCTTTTCAATAACCAAAGTAGCCATCGGGCCTTTATCAAAGACACAAAGACAGCTATTACAGAGGTTTTTAAACATGCAAACTATATTAAAGAAGATAGAGGCCAGCAGAAAGATGTCGGGTCAACTGCTGTCCTATTAGGGGATCGTCTCTTTGTTGCTAATGTTGAATAGTCCAGAATAGTTGTATCTAGAGTTGGTTCAGGTTGCCTATTATTTTTTTTTCTGTCAATAGATGATTTTGGGATAGAGGACTTGCACTTCAAAGTCGTGACATGATAACGGTTCCTTGAAAATCATTGCAAGTAGTGGAGAATATTTTATCTTGTATAGTTTGTATAACTTTATTTTAGGAAATGATGGAATACTACTCTTGTAATGGAAATAGATTATGAAATCTCAATTATGAACGGAAGTCATGG ATGTTTCTTGCAAAGAGCAATGATGTCCAGCTTGGGGACTTTAGACTTGCAAAACTACTCAATATAGAAGACCTTGCTTCATCATCATCGTTTAATAGACACATTGATGTACTTGGGTCAAGAACAACTGGATACCTTAAGCGCAATCTTTTCAATAACCAAAGTAGCCATCGGGCCTTTATCAAAGACACAAAGACAGCTATTACAGAGGTTTTTAAACATGCAAACTATATTAAAGAAGATAGAGGCCAGCAGAAAGATGTCGGGTCAACTGCTGTCCTATTAGGGGATCGTCTCTTTGTTGCTAATGTTGAATAG MFLAKSNDVQLGDFRLAKLLNIEDLASSSSFNRHIDVLGSRTTGYLKRNLFNNQSSHRAFIKDTKTAITEVFKHANYIKEDRGQQKDVGSTAVLLGDRLFVANVE Homology
BLAST of CmoCh20G009920 vs. ExPASy Swiss-Prot
Match: Q8VZN9 (Probable protein phosphatase 2C 11 OS=Arabidopsis thaliana OX=3702 GN=At1g43900 PE=2 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 4.5e-12 Identity = 40/71 (56.34%), Postives = 47/71 (66.20%), Query Frame = 0
BLAST of CmoCh20G009920 vs. ExPASy Swiss-Prot
Match: Q8LAY8 (Probable protein phosphatase 2C 69 OS=Arabidopsis thaliana OX=3702 GN=At5g10740 PE=2 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 4.2e-10 Identity = 33/71 (46.48%), Postives = 47/71 (66.20%), Query Frame = 0
BLAST of CmoCh20G009920 vs. ExPASy Swiss-Prot
Match: Q4PSE8 (Probable protein phosphatase 2C 71 OS=Arabidopsis thaliana OX=3702 GN=At5g24940 PE=2 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 9.3e-10 Identity = 33/71 (46.48%), Postives = 46/71 (64.79%), Query Frame = 0
BLAST of CmoCh20G009920 vs. ExPASy Swiss-Prot
Match: Q94AT1 (Probable protein phosphatase 2C 76 OS=Arabidopsis thaliana OX=3702 GN=At5g53140 PE=2 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 2.3e-08 Identity = 31/71 (43.66%), Postives = 45/71 (63.38%), Query Frame = 0
BLAST of CmoCh20G009920 vs. ExPASy Swiss-Prot
Match: Q7XR06 (Probable protein phosphatase 2C 45 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0659500 PE=2 SV=2) HSP 1 Score: 59.3 bits (142), Expect = 3.0e-08 Identity = 31/70 (44.29%), Postives = 45/70 (64.29%), Query Frame = 0
BLAST of CmoCh20G009920 vs. ExPASy TrEMBL
Match: A0A6J1FXV2 (probable protein phosphatase 2C 11 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111448237 PE=4 SV=1) HSP 1 Score: 186.0 bits (471), Expect = 7.9e-44 Identity = 94/95 (98.95%), Postives = 94/95 (98.95%), Query Frame = 0
BLAST of CmoCh20G009920 vs. ExPASy TrEMBL
Match: A0A6J1FRU5 (probable protein phosphatase 2C 11 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111448237 PE=4 SV=1) HSP 1 Score: 177.9 bits (450), Expect = 2.1e-41 Identity = 92/95 (96.84%), Postives = 93/95 (97.89%), Query Frame = 0
BLAST of CmoCh20G009920 vs. ExPASy TrEMBL
Match: A0A6J1GLD9 (Protein-serine/threonine phosphatase OS=Cucurbita moschata OX=3662 GN=LOC111455391 PE=3 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 1.1e-16 Identity = 53/71 (74.65%), Postives = 56/71 (78.87%), Query Frame = 0
BLAST of CmoCh20G009920 vs. ExPASy TrEMBL
Match: A0A6J1JND0 (Protein-serine/threonine phosphatase OS=Cucurbita maxima OX=3661 GN=LOC111486875 PE=3 SV=1) HSP 1 Score: 94.7 bits (234), Expect = 2.4e-16 Identity = 52/71 (73.24%), Postives = 55/71 (77.46%), Query Frame = 0
BLAST of CmoCh20G009920 vs. ExPASy TrEMBL
Match: A0A6J1K3N7 (Protein-serine/threonine phosphatase OS=Cucurbita maxima OX=3661 GN=LOC111489768 PE=3 SV=1) HSP 1 Score: 93.6 bits (231), Expect = 5.3e-16 Identity = 52/71 (73.24%), Postives = 55/71 (77.46%), Query Frame = 0
BLAST of CmoCh20G009920 vs. NCBI nr
Match: XP_022943480.1 (probable protein phosphatase 2C 11 isoform X1 [Cucurbita moschata]) HSP 1 Score: 186.0 bits (471), Expect = 1.6e-43 Identity = 94/95 (98.95%), Postives = 94/95 (98.95%), Query Frame = 0
BLAST of CmoCh20G009920 vs. NCBI nr
Match: XP_022943481.1 (probable protein phosphatase 2C 11 isoform X2 [Cucurbita moschata]) HSP 1 Score: 177.9 bits (450), Expect = 4.4e-41 Identity = 92/95 (96.84%), Postives = 93/95 (97.89%), Query Frame = 0
BLAST of CmoCh20G009920 vs. NCBI nr
Match: KAG6592251.1 (putative protein phosphatase 2C 11, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 133.3 bits (334), Expect = 1.2e-27 Identity = 65/74 (87.84%), Postives = 70/74 (94.59%), Query Frame = 0
BLAST of CmoCh20G009920 vs. NCBI nr
Match: KAG6575272.1 (putative protein phosphatase 2C 11, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 118.6 bits (296), Expect = 3.2e-23 Identity = 59/65 (90.77%), Postives = 61/65 (93.85%), Query Frame = 0
BLAST of CmoCh20G009920 vs. NCBI nr
Match: XP_023528031.1 (probable protein phosphatase 2C 11 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 95.9 bits (237), Expect = 2.2e-16 Identity = 53/71 (74.65%), Postives = 56/71 (78.87%), Query Frame = 0
BLAST of CmoCh20G009920 vs. TAIR 10
Match: AT1G43900.1 (Protein phosphatase 2C family protein ) HSP 1 Score: 72.0 bits (175), Expect = 3.2e-13 Identity = 40/71 (56.34%), Postives = 47/71 (66.20%), Query Frame = 0
BLAST of CmoCh20G009920 vs. TAIR 10
Match: AT5G10740.1 (Protein phosphatase 2C family protein ) HSP 1 Score: 65.5 bits (158), Expect = 3.0e-11 Identity = 33/71 (46.48%), Postives = 47/71 (66.20%), Query Frame = 0
BLAST of CmoCh20G009920 vs. TAIR 10
Match: AT5G24940.1 (Protein phosphatase 2C family protein ) HSP 1 Score: 64.3 bits (155), Expect = 6.6e-11 Identity = 33/71 (46.48%), Postives = 46/71 (64.79%), Query Frame = 0
BLAST of CmoCh20G009920 vs. TAIR 10
Match: AT4G31750.1 (HOPW1-1-interacting 2 ) HSP 1 Score: 61.2 bits (147), Expect = 5.6e-10 Identity = 31/71 (43.66%), Postives = 44/71 (61.97%), Query Frame = 0
BLAST of CmoCh20G009920 vs. TAIR 10
Match: AT5G53140.1 (Protein phosphatase 2C family protein ) HSP 1 Score: 59.7 bits (143), Expect = 1.6e-09 Identity = 31/71 (43.66%), Postives = 45/71 (63.38%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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