CmoCh20G009770 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh20G009770
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like
Location	Cmo_Chr20: 5430141 .. 5439109 (-)
RNA-Seq Expression	CmoCh20G009770
Synteny	CmoCh20G009770

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTATGTGAAAACCCTTATCCAAATCCGTAAGGATTTCTTCTGCTGCGTAAAACTGAAGGGCAAATATTCGACCAAGCCGGCGGCGGCGATGGGCTACGCAGCCATCGTCATCGTTAGGTTATGAGATCCCCTTCCAATTCTCACCTCCATCTCAAATCTATATTGTCACTCCGTAAGTCATTCATGGCTTCCTCTTTCACACAAACCGACTTCCCTCAAGACCTCGACGACCTTCTCTGCTCCGATCCACACACACAGCCACAAGATGAATGCTCCTCTCTTACCAAATCCAATGACTCAACACTTCTCTTGGGGTCTCCGAGTGGATATTTGAGTGGCGAGTCGCGCATTGAGCGAGCCTGGGCTCACTGGTCCAAGCTCGGTCGTCCGAAGTTGATTGTAGCTCCGATGGTTGATAATTCGGAGCTTCCGTTCCGTTTGCTCTGCAGGAAATATGGTGCCGAGGCGGCGTATACACCTATGCTGCATTCACGGATCTTTACTGAGAACGAGAAGTATCGTAACATGGAATTCACAACTTGTCAGGTATGTTAAACGTTATAAGTCATTCTTTTGTGTTAACAACTTGAGTTTTCTGTTTAAGGATATAATATTGTCTGTATTTCTGTAAGTCTATTCTTCATTGTTCTTAAACTGTGGAATGATTCGTAGGAGGACCGTCCATTATTTGTTCAATTTTGTGCCAATGATCCCGATGTTTTGCTGGAAGCTGCTAGAAGAGTGGAGCCATATTGTGATTATGTCGATCTTAACCTCGGGTAATCTCTATTAGTCTAATTCGTATTCGAAGGGTAATTTGTACGAATATTTTCATTCCATATGTTCTTATATTCCAAATGCTGACCTCTTATACTTCTTGTGGGTTGGTGGAGTAAGGATTTGTCTTCCAAAAGAGTTCTTTGAATAAGAAACAATTTCATTGATGGTATGAAATTACGAAAGAAATAGCCTCCTTCTCTGATTAGCTATACTAATGAAAAAGAGGACGCATTTACACCAAGTTGCAACCAAACTAACTATAGCCTCGAAAAATCTAAGTTATGTGGGTTCCTTATCGTGAAAGATTCTTCTATTACGTTCTTGCCAAATGGTCAATAAATGTTCCAGATTGGTCAGTAATATGTGGGGAGGTTTGATAGGGTTGCTTATACGAGCGTAAGTCTAACCCCTTGAGATGCGTTTGTTGGTCCAGATTGGTGGACGTTGATGGGGGACGTTCCGAGGGTGAAGCCTTTAATGGCACTTATTTATTCAACATGAATAAAAAATCTACTAAAACAATCAACCATCCTAATGAAAAGAAAATGGGGAAAGTCGGTCACCTTGGCGATGACCTCCAGTAGCAAGAATCTCTCCTCTTGCTTCGCTGATAATGATAATTGGAAAATTAGGAAAGCAGATGCGACCTGTAATCCATTTACTCCATGTGTGGCTGGAGCTTTTTGCCAATAGGATCTCGTCTAAAAAAATCCCAGCCCACCTTGTTCAAAGCTTTCTCAATGCCTAGCTTAAGAACTGCCTCTTTTTTCATTCTCCTTTTCCACCCATCAATAAATTCATTTGCAATAAGGTTGTCTCAAGGATATGTCTACCACCTACAAAATTCGATTGGTATTCGGTGATAGTATGGGGAAGAACCTTCTTGAGAGACTCAGATAGAACTCAAGCAATGATCTTATACATACAAGAAATAAGGCTAGTTGGGTGAAACTAGCCAACAGTTTGGGCATTTGTTTTCTTGGGGATGAGGCATATGTAAGCCTCATTCAAGCTAGCATTGTAATCCCATTCTTGAAAATATCATGGAACACTGTTCCAAGACTTCTTCTAGAATTCAACTGTAAAACCATCCAGCCTCATTAGCACTCAATTCTTTCACAGAAGACCAAATTTCTTCTTTTGTAAAGGCCATCTCCAATTCCAATGCTTGTTGAGTGGTAATAGGGTCCCAATAAATAGGAGATGGAAAAAACTGGCACCCTTCTTTTTGGTAAAAAAGTCCACATAAAATATAAGAAATGCTTCTTCAATCTCCGTTTCAGTGACACTGTAACCATCCTTGGAAAGAATCTTTAAGATACATATATATTTTTTTTACTTCTTGAGGTCACATCCAATGAAAGAAGCTTGTGTTGATATCTCCTTCATTCAACTATTTCAATTTACAGCTTTGTCTCCACATGTTTTCTTCTTGGATAGCCAAGGATAAAAGCTAGGTTTTGATAGAAGTCTTCTGGGTGATTTGGATATGATGGATTTCCCCTGTTTCTTCAATGGAGTCCAAAACTAAGAACTCCATGGCAGGATTTCCTTCTAAATTTTGATGCTGCTAGAGGTTTCCTTGTTCCATGTTTTTTAACTGATTTGAGGCCCTCAAGTTTTGAATAAAGTCATGATCATCTGGCCAACCTCTCAAAAAATGTATTCAGCCACCAATATTCAACCTTAGAAAGAAAGCTTTGATGTTGCGTCCACATATTTTGGAATCTAAAATGAGTATGGCCTCATTTATCCACCCCAAAAGAAAGTTGAACGGGATAATGATTGAAACAATTCTTTCTGGTCTTTTAACCGTTGCAGTAGGGAATCTGTTAAGTGGTCGATGACAAGGAATATGTCAATAAGAGTGAGAGTGGGAGATTCCCTAAGATCTAAGCATGTGTACAGCCCATTTGTCATTGGAATCTCAGTAAGGGCCGCATGCTTTGCCTTGCGGTTCTTCAAGCATTATAATTTGCTTTTGAAGCGCATATTGTTCAAATACCCTCCCAAAAGCCATGATTCAGTGCGTTAAAAGGTCTAGTACCATAATTCCTCAGGCATAAATTCCCCATGAGTCAGTGTTCGATTTCCACAAACTAGTAATCGATGCTTGTTTTGTGAGGGAGAGATGGAAAAGAACAGGATATTTAGTTTGGACATTTTGGGTTCTCAACCAATTATCCTTCCAGAATAATGTTGTTTCCATTGCCAACCTCAGTAGTAATGTGGTTGTACACTGCTGTAATTTTCGAGTAACGACCTAGCTTTCTACTGACCTAGAGTCGTTGTCATATGCATGACGTAACTTTTTTATGCGGAATGATTCATTTCAACAACTTCATAAAACGACGTCAGTGACTTGAACCTTTAAGAAAAGGGTCTTATAACAATACAAATGAAATATTCAAAATAAATTAAAATAAACTAATGAAAATATTAAAATAACAATGCTCTATCCCACCTAAGATCTATGAAAATAAATGCAACTATCCTATGCAAGTTCATTAGTCTTTGGTGCGATGCTGTCATCACCCGTACATGGCTTGAGAAATATTCAGCAAGTGACCCTACTATTAGGAATGCAAACCCATGCAATCATTAATAAGGACCTATCATTTAGAACCATAGTCTCTTTGGGAGTTTCTAGTTCGAACAAACTGAATATGTAGTACTTCCCTACACACGACCCACATGTGCGAACGTGGGCCCACCAGGCGGGCTCACACACCCGTTGGGCCTGCATGGTCAGGCTAGTTGGCTATAGCGGACATTTGGAGGTACGACGACGTCGTGTATCATGCCAAGCACGATACTCATCATCTTCATAGTGTACACGTCCATACTCATCATAAATTGGGAACTATCTCGATGTAAATGGACATACAACATGAGGATATTTAATCATCTTAATCATTCATGCAGCACAACTCCCGCACATTCTTCACATATTACCCTAGGTAACATGCATGCATAAGGTTTCATACATTCATCATTCATAACATTACTTGGGAGTTTTGCATCAGAAAATTATTCATTGTCATACATGTCGTAGCATGTCATATCATAGTGCAACATGACTTCTCATATATGCATATCATCGTAACATAAGATATCATCATAATATATTATATCGTCATACATTTCATGTCATCGTAACATATTACATCATTGTTATAATGTTTCATAACATCATGGCATATCACATCATCATAACATATTACATCATCATAACATATCATAGCATCATAGCATATCATATCATCATACCACATCATATCAACAAACATGACACATGCAGGGGCTACTGGGCACATGTCATCATTAAGACAAGTCTTCCGACCGAGTTGATAGTAGGGCCACTTGGTTGCTCTAGGTTGAAACTACTATGACCCCTTGATTCTAGTTTAACGCTGCTCTCTGAAATGTAATTCTGCCTGAGGAGTCCCACAATAATAAATTAGAATTCTATTGTGTGAATTGTCTCACCTAATCTTGCATAAAATAATTTAAACCAGCTAAACCTAATTTATAATTTAAACTTATTCCTAATAATTTAAACTTATTCCTAATTTAGTAGTCAAACTAACTTTAAATGTTTCTAAAGAGTTGAAACTAATAGAAAAGTGTTCGAGCATATCAAACCCAAGCCAGATCAGTTAAAACGTTGGCATGTAGCCGTCAGATAATGTATTCTCCGATTGGCTTCGAACCGTTAAAGTGGGATGAAGGGGAGTCAAGGACCTTCTTTTTATGGTAGAGTCTAACTCCCCACTTTTCAACATAAGCAATGTGGGAGAACTTCCTTTTTTTTTTTTTTCTTGGGTTATTAAATCATACACATTTAAAATACTACATCATAACATATGCGACGTATCCATGCTTCACAAATACTTGGATGACTCGACTCACGTCGTAGATTACAAGGTCTTACAAATAGACGATAGCCTAAGATACGAGAAAAAACCAATAAGAATTTTATCTCGGGAAGTGAAGGTCTTCTGTACTAGGAATATGGTCTTTACAAAACCATTAAGCAGGAGAAACTATATGAGCACATAAGGGAGAGATGAGGGAGAAATACCCCGAGTAATTCCTAAATCGAGGCACTTTTGAGGACGAAAGTTTGTTTTAGATGTGTATGATATAATAACAAAAAAAAAAAAAAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAAAAAAAAAAAAAAAAAAAAGGAAGAAGAAGAAGAAGAAGAAGTTGTCCCACGTTGCTTAAGTTGAAAAGTTGGGGAGTTAGGCGAAGGTCCCTTACTTCCTTTCATCTCACTTGAACGATTCGAAGTCAGTCAGAGAATACATTTTCTGACAGCTTCAAGCTAGCATTTTGGCTAATTTGGCTTGGGTTTGATACGCTAAGATCCTTTCCTACTAGTTTCAACTCTTCGGAAGTGTTTAAGGTTAGTATGACTATCTTTTAGTTAGTTAAAATTTTTTGAGTTAAGTTTAAATTATTTTATACAAAATTTGGTTCAGCTAGTCTAAATTATTAGGGGTAAGTTTAAATTGTTTCATGCAAAATTAGGTGAACCAATTCTCATCTTAAAATTCTATTTTATGATTGTGAGAATCCTTCGGTAGAATTACATTTTAGAGAGTATCGGTAGAATTACATTTTAGAGAGTAGAATCCTTCGGTAGAATTACATTATAGAGAACAGAATCCTTAGGTAGTTACATTTTAGAGAGAAGAATCCTCAGGTAGAATTACATTTTAGAAAGCAGAATCCTCAAGTAGAATTACATTTTAGAGAGTAAAATCCTAGGCCAATCAAGTAAGTGGCCCTGCTATTAGCTTGATCGGAAGATTTGTATTGTGTATGATGACACGTGCCCAGTGGCCCATGCACATGTCATATATGTTGATATATTATGATGATTTGAAGTGTTATGGTATGTTATGACGATGATGTAACACTATGATGACATGAGATGTATGAGGATATGACATAGTATGATGATATCTCATATTACGATGATATGCATGTATAAGATGCCATGTTGCACTATGATAGGACATGTCTGGCAATGAAGAGTTTTCCAGTACCCTTGAGTAATGTTATGAAGCTTATGCATGCATATTTCCTAAGGTAATATGTGAGGTTATGCTGCATGAATGATTAAGATGAAAAGTACAAGGACTTCATGCATATTGTATGTCTATTTACATCGGGATACTTCTCCTTTTATGATAAGTACAAACACGTATACTATGATGATGACGACTATTATACTTGGCATGATACATGATGTCGTCGTACTTCTGGATGTCTGGCTACAACTATCTATCCCGACCATGCAGGCCCAGGGGGTGTGCGAGCCCACCTGGTGGGCTCACGTTCGCATATGTGAGTCATGTGTAAGGAAGTACTACAAATCCAATTTATTCGGACTGGAGGCTACTTAAGAGACTATGGTTTTAAATGATAAGTCTCTATTCATTAATATTTTAAGAAATACTCAAGTCATGTGCTACTATTATATTTTAGGTAAATGCAAAGGCGCACAAAAAACCATGAAACTTGCGTAAGGTAGTTGCATTTATTTTCGTAGATCTTAGGTTCGTACCGGGCATTGTTATTTTTATATTTTCCTTGGCTTATTTTAATTTACTTTGAATATTTTCTTTGTATTGTTTTAAAACCATTTTCTTAAACATACAAGTCCATGACATTGTTTTATGAATTCGTTTTAAATGAATATTTTTGTATATAGGAGTTACGTCATGCATATGGTAACGACTCTAAGTCTTTAGAAAACTAGTGTCGCTACATTTTCAATAGACTTTGGTGGACTTCTTGAGGAGAATAATGATTTCCTACCCGTTTTTTAGTTGAAATGAGTAGTTCCATTTTTTGGAGCAATAACACTCTTCTCCAAAGGGCCTCCTTCTCACGATAAGAACGGCAAATCCACTTTGCTAGGAGGTAGATGTTTTTCCTTATCAGATCATATATCCTCAGGCCTCCTTCAATAGGCTTTTCTAAAGATCATTTAACAATACCTTTCTTGTCAGTATTGTGTTTCTCAGAAATATTAACGGCTATAATTGGGCTATTTTGAAACGATGATGGTTCAGAGGCAGAACAGATTGGGTAATGTTTGGTTTGTGGGGCTTTTGGTTTGGTTTAGAAAGGTAACACCACTAATTTTCTTTTGCCTTAGACTTATATGTTTAAAACAAGAAATAGAAATAACGTCGTCAAAATAAAAACCTTAACATAATGTTTGAGTACGAAAATGAAAAACCACCTATAAAACTACAAACTGAAAACATTGCATACTACTATCGTATCTTAGCTTTCATGGCCATTCCAACATTCTTCGTCATCCATGTAGAGGCGCTTTACCTCTACCTGAAATGTAAGAGTAGCACATGGCTTGAATATTTTAAGAAATGCTTAGTAAGTAACCTCATTGTTGTGGTTGGGTAATGCAAGCGCACACATACATGATGAAATCTCTCTCTTAAAACAACGTAGCATAGCCTTAAGCTCTTTCCAATTTCGGGCAGGGTTGGATGTATGAGACTTCCCCACACATGGCCCGACATTGCCCGGAATTAGAAAGAGTTCAAGGTCATGCTATATTGTTTTAAAGGATAGGTCCCATCATGTATGTGTGTGCTAGATCCAACCCCAACCAAATATTCAAACTATGTGCTACTCTTACATTTCAGTAAAGCGTCCCTTCCCATTAGTATTTATTCTTTGTATTTATTTTCTGCATTGTTCTCCATTTCAGTTGTGTTTCTGAACTTCATTTGAGTGCTCTATTAATTTCATGCAGTTGTCCTCAGCGTATTGCAAGGCGAGGAAATTATGGGGCTTTTTTGATGGACAACTTACCTCTTGTAAAAGCAATAGTAGAGAAAGTGGCTTCCAATCTTCAGGTTCCTGTATCATGCAAAATCCGAGTCTTCCCAAATTTACAGGATACAATTAATTATGCAAGAATGTTAGAGGATGCTGGCTGCTCTCTTTTAGCTGTCCATGGCCGCACAAGAGATGAAAAAGATGGCAAGAAATTCCGAGCTAATTGGAGCGCCATTAGTGCTGTTAAAAACGCTCTACGAATCCCGGTTCTTGCCAATGGGAACATAAGGCACATGGAAGATGTTCACAACTGCTTGCAAGAGACTGGAGTTGAGGGCGTGCTTTCAGCCGAAACCCTTCTGGAGAATCCTGCACTTTTTGCTGGGTTTCGAACCGCGCAATGGACAGCAGGCTGTGAAGAAAGTAGCAGGGATGGAAACCTGGATCAAGCTGATCTACTGGTGGACTACTTGAAGCTTTGTGAAAAATACCCTGTCCCGTGGCGAATGATCCGTTCACACGTACACAAGTTGTTGGGAGATTGGTTCAAGATTCATCCACACATTAGAGAAGATTTCAATGCACAATCCAAGCTCACCTTTGAATTTCTTTACAACATGGTGGAGCAGCTGAGAGAGTTGCAGGTAAAAATTCCTCTTTATATTAAGGATTCTCCTGCATCTGCTATTTCATCCATTGGTTGACTGCTTCACTGATCATTGATTGATTGATAGGCTTACTGGTCTTAACTTAAAAATTCTTTGCGAAAATTAGATTCAATCTGTTGTTGTACCATTGATATTCACATAAAATTGTTCTTCATTCAGCTTGGACACAGCGATGAAAGAAAAGATTTTGTAGTTAATTGTTGTGAATTGTAGCCTGAATTTATTTGATTAGGGAAGAGATGGAGAGTTTACGTTACCTTTTGGCTTTGAATTGTGAGTAGTGATTTTAACTATGCAAAATGCATGTGTTGAGACTCAAAGTCACCCACTTATTTCATCTTATTGTTTGAACATTGTTTCGTTGCCATGATAGCTTGATTTGATATGAG

mRNA sequence

ATTTATGTGAAAACCCTTATCCAAATCCGTAAGGATTTCTTCTGCTGCGTAAAACTGAAGGGCAAATATTCGACCAAGCCGGCGGCGGCGATGGGCTACGCAGCCATCGTCATCGTTAGGTTATGAGATCCCCTTCCAATTCTCACCTCCATCTCAAATCTATATTGTCACTCCGTAAGTCATTCATGGCTTCCTCTTTCACACAAACCGACTTCCCTCAAGACCTCGACGACCTTCTCTGCTCCGATCCACACACACAGCCACAAGATGAATGCTCCTCTCTTACCAAATCCAATGACTCAACACTTCTCTTGGGGTCTCCGAGTGGATATTTGAGTGGCGAGTCGCGCATTGAGCGAGCCTGGGCTCACTGGTCCAAGCTCGGTCGTCCGAAGTTGATTGTAGCTCCGATGGTTGATAATTCGGAGCTTCCGTTCCGTTTGCTCTGCAGGAAATATGGTGCCGAGGCGGCGTATACACCTATGCTGCATTCACGGATCTTTACTGAGAACGAGAAGTATCGTAACATGGAATTCACAACTTGTCAGGAGGACCGTCCATTATTTGTTCAATTTTGTGCCAATGATCCCGATGTTTTGCTGGAAGCTGCTAGAAGAGTGGAGCCATATTGTGATTATGTCGATCTTAACCTCGGTTGTCCTCAGCGTATTGCAAGGCGAGGAAATTATGGGGCTTTTTTGATGGACAACTTACCTCTTGTAAAAGCAATAGTAGAGAAAGTGGCTTCCAATCTTCAGGTTCCTGTATCATGCAAAATCCGAGTCTTCCCAAATTTACAGGATACAATTAATTATGCAAGAATGTTAGAGGATGCTGGCTGCTCTCTTTTAGCTGTCCATGGCCGCACAAGAGATGAAAAAGATGGCAAGAAATTCCGAGCTAATTGGAGCGCCATTAGTGCTGTTAAAAACGCTCTACGAATCCCGGTTCTTGCCAATGGGAACATAAGGCACATGGAAGATGTTCACAACTGCTTGCAAGAGACTGGAGTTGAGGGCGTGCTTTCAGCCGAAACCCTTCTGGAGAATCCTGCACTTTTTGCTGGGTTTCGAACCGCGCAATGGACAGCAGGCTGTGAAGAAAGTAGCAGGGATGGAAACCTGGATCAAGCTGATCTACTGGTGGACTACTTGAAGCTTTGTGAAAAATACCCTGTCCCGTGGCGAATGATCCGTTCACACGTACACAAGTTGTTGGGAGATTGGTTCAAGATTCATCCACACATTAGAGAAGATTTCAATGCACAATCCAAGCTCACCTTTGAATTTCTTTACAACATGGTGGAGCAGCTGAGAGAGTTGCAGGTAAAAATTCCTCTTTATATTAAGGATTCTCCTGCATCTGCTATTTCATCCATTGGTTGACTGCTTCACTGATCATTGATTGATTGATAGGCTTACTGGTCTTAACTTAAAAATTCTTTGCGAAAATTAGATTCAATCTGTTGTTGTACCATTGATATTCACATAAAATTGTTCTTCATTCAGCTTGGACACAGCGATGAAAGAAAAGATTTTGTAGTTAATTGTTGTGAATTGTAGCCTGAATTTATTTGATTAGGGAAGAGATGGAGAGTTTACGTTACCTTTTGGCTTTGAATTGTGAGTAGTGATTTTAACTATGCAAAATGCATGTGTTGAGACTCAAAGTCACCCACTTATTTCATCTTATTGTTTGAACATTGTTTCGTTGCCATGATAGCTTGATTTGATATGAG

Coding sequence (CDS)

ATGAGATCCCCTTCCAATTCTCACCTCCATCTCAAATCTATATTGTCACTCCGTAAGTCATTCATGGCTTCCTCTTTCACACAAACCGACTTCCCTCAAGACCTCGACGACCTTCTCTGCTCCGATCCACACACACAGCCACAAGATGAATGCTCCTCTCTTACCAAATCCAATGACTCAACACTTCTCTTGGGGTCTCCGAGTGGATATTTGAGTGGCGAGTCGCGCATTGAGCGAGCCTGGGCTCACTGGTCCAAGCTCGGTCGTCCGAAGTTGATTGTAGCTCCGATGGTTGATAATTCGGAGCTTCCGTTCCGTTTGCTCTGCAGGAAATATGGTGCCGAGGCGGCGTATACACCTATGCTGCATTCACGGATCTTTACTGAGAACGAGAAGTATCGTAACATGGAATTCACAACTTGTCAGGAGGACCGTCCATTATTTGTTCAATTTTGTGCCAATGATCCCGATGTTTTGCTGGAAGCTGCTAGAAGAGTGGAGCCATATTGTGATTATGTCGATCTTAACCTCGGTTGTCCTCAGCGTATTGCAAGGCGAGGAAATTATGGGGCTTTTTTGATGGACAACTTACCTCTTGTAAAAGCAATAGTAGAGAAAGTGGCTTCCAATCTTCAGGTTCCTGTATCATGCAAAATCCGAGTCTTCCCAAATTTACAGGATACAATTAATTATGCAAGAATGTTAGAGGATGCTGGCTGCTCTCTTTTAGCTGTCCATGGCCGCACAAGAGATGAAAAAGATGGCAAGAAATTCCGAGCTAATTGGAGCGCCATTAGTGCTGTTAAAAACGCTCTACGAATCCCGGTTCTTGCCAATGGGAACATAAGGCACATGGAAGATGTTCACAACTGCTTGCAAGAGACTGGAGTTGAGGGCGTGCTTTCAGCCGAAACCCTTCTGGAGAATCCTGCACTTTTTGCTGGGTTTCGAACCGCGCAATGGACAGCAGGCTGTGAAGAAAGTAGCAGGGATGGAAACCTGGATCAAGCTGATCTACTGGTGGACTACTTGAAGCTTTGTGAAAAATACCCTGTCCCGTGGCGAATGATCCGTTCACACGTACACAAGTTGTTGGGAGATTGGTTCAAGATTCATCCACACATTAGAGAAGATTTCAATGCACAATCCAAGCTCACCTTTGAATTTCTTTACAACATGGTGGAGCAGCTGAGAGAGTTGCAGGTAAAAATTCCTCTTTATATTAAGGATTCTCCTGCATCTGCTATTTCATCCATTGGTTGA

Protein sequence

MRSPSNSHLHLKSILSLRKSFMASSFTQTDFPQDLDDLLCSDPHTQPQDECSSLTKSNDSTLLLGSPSGYLSGESRIERAWAHWSKLGRPKLIVAPMVDNSELPFRLLCRKYGAEAAYTPMLHSRIFTENEKYRNMEFTTCQEDRPLFVQFCANDPDVLLEAARRVEPYCDYVDLNLGCPQRIARRGNYGAFLMDNLPLVKAIVEKVASNLQVPVSCKIRVFPNLQDTINYARMLEDAGCSLLAVHGRTRDEKDGKKFRANWSAISAVKNALRIPVLANGNIRHMEDVHNCLQETGVEGVLSAETLLENPALFAGFRTAQWTAGCEESSRDGNLDQADLLVDYLKLCEKYPVPWRMIRSHVHKLLGDWFKIHPHIREDFNAQSKLTFEFLYNMVEQLRELQVKIPLYIKDSPASAISSIG

Homology

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BLAST of CmoCh20G009770 vs. ExPASy Swiss-Prot
Match: Q8K582 (tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like OS=Rattus norvegicus OX=10116 GN=Dus1l PE=2 SV=1)

HSP 1 Score: 296.6 bits (758), Expect = 4.5e-79
Identity = 143/298 (47.99%), Postives = 194/298 (65.10%), Query Frame = 0


Query: 84  WSK-LGRPKLIVAPMVDNSELPFRLLCRKYGAEAAYTPMLHSRIFTENEKYR--NMEFTT 143
           WS+ LG  + +VAPMVD SEL +RLL R++GA+  YTPMLH+++F  +  YR  N+    
Sbjct: 10  WSRALGGARHVVAPMVDQSELAWRLLSRRHGAQLCYTPMLHAQVFVRDANYRKENLYCDV 69

Query: 144 CQEDRPLFVQFCANDPDVLLEAARRVEPYCDYVDLNLGCPQRIARRGNYGAFLMDNLPLV 203
           C EDRPL VQFCANDP+V ++AA   + YCD +DLNLGCPQ IA+RG YGAFL +   L+
Sbjct: 70  CPEDRPLIVQFCANDPEVFVQAALLAQDYCDAIDLNLGCPQMIAKRGRYGAFLQEEWDLL 129

Query: 204 KAIVEKVASNLQVPVSCKIRVFPNLQDTINYARMLEDAGCSLLAVHGRTRDEKDGKKFRA 263
           + ++      L VPV+CKIRVFP +  T+ YA+MLE AGC LL VHGRT+++K      A
Sbjct: 130 QRMILLAHERLSVPVTCKIRVFPEIDKTVRYAQMLEKAGCQLLTVHGRTKEQKGPMAGTA 189

Query: 264 NWSAISAVKNALRIPVLANGNIRHMEDVHNCLQETGVEGVLSAETLLENPALFAGFRTAQ 323
           +W  I AV+ A+ IPV ANGNIR ++DV  C+Q+TGV+GV+SAE  L NPALF G   A 
Sbjct: 190 SWEHIKAVRKAVGIPVFANGNIRCLQDVERCIQDTGVQGVMSAEGNLHNPALFEGRSPAV 249

Query: 324 WTAGCEESSRDGNLDQADLLVDYLKLCEKYPVPWRMIRSHVHKLLGDWFKIHPHIRED 379
           W                +L  +YL +  ++P P   +R+H+ KL     ++H  +RE+
Sbjct: 250 W----------------ELADEYLDIVRQHPCPLSYVRAHLFKLWHHTLQVHQQLREE 291

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BLAST of CmoCh20G009770 vs. ExPASy Swiss-Prot
Match: Q8C2P3 (tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like OS=Mus musculus OX=10090 GN=Dus1l PE=2 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 7.6e-79
Identity = 142/298 (47.65%), Postives = 195/298 (65.44%), Query Frame = 0


Query: 84  WSK-LGRPKLIVAPMVDNSELPFRLLCRKYGAEAAYTPMLHSRIFTENEKYR--NMEFTT 143
           WS+ LG  + +VAPMVD SEL +RLL R++GA+  YTPMLH+++F  +  YR  N+    
Sbjct: 10  WSRTLGGARHVVAPMVDQSELAWRLLSRRHGAQLCYTPMLHAQVFVRDANYRKENLYCDV 69

Query: 144 CQEDRPLFVQFCANDPDVLLEAARRVEPYCDYVDLNLGCPQRIARRGNYGAFLMDNLPLV 203
           C EDRPL VQFCANDP+V ++AA   + YCD +DLNLGCPQ IA+RG+YGAFL +   L+
Sbjct: 70  CPEDRPLIVQFCANDPEVFVQAALLAQDYCDAIDLNLGCPQMIAKRGHYGAFLQEEWDLL 129

Query: 204 KAIVEKVASNLQVPVSCKIRVFPNLQDTINYARMLEDAGCSLLAVHGRTRDEKDGKKFRA 263
           + ++      L VPV+CKIRVFP +  T+ YA+MLE AGC LL VHGRT+++K      A
Sbjct: 130 QRMILLAHERLSVPVTCKIRVFPEIDKTVRYAQMLEKAGCQLLTVHGRTKEQKGPMAGTA 189

Query: 264 NWSAISAVKNALRIPVLANGNIRHMEDVHNCLQETGVEGVLSAETLLENPALFAGFRTAQ 323
           +W  I AV+ A+ IPV ANGNI+ ++DV  C+Q+TGV+GV+SAE  L NPALF G   A 
Sbjct: 190 SWEHIKAVRKAVGIPVFANGNIQCLQDVERCIQDTGVQGVMSAEGNLHNPALFEGRSPAV 249

Query: 324 WTAGCEESSRDGNLDQADLLVDYLKLCEKYPVPWRMIRSHVHKLLGDWFKIHPHIRED 379
           W                +L  +YL +  ++P P   +R+H+ KL     ++H  +RE+
Sbjct: 250 W----------------ELAEEYLDIVRQHPCPLSYVRAHLFKLWHHTLQVHQQLREE 291

[Close]

BLAST of CmoCh20G009770 vs. ExPASy Swiss-Prot
Match: Q6P1R4 (tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like OS=Homo sapiens OX=9606 GN=DUS1L PE=1 SV=1)

HSP 1 Score: 293.9 bits (751), Expect = 2.9e-78
Identity = 142/298 (47.65%), Postives = 194/298 (65.10%), Query Frame = 0


Query: 84  WSK-LGRPKLIVAPMVDNSELPFRLLCRKYGAEAAYTPMLHSRIFTENEKYR--NMEFTT 143
           WS+ L   + +VAPMVD SEL +RLL R++GA+  YTPMLH+++F  +  YR  N+    
Sbjct: 10  WSRTLRGARHVVAPMVDQSELAWRLLSRRHGAQLCYTPMLHAQVFVRDANYRKENLYCEV 69

Query: 144 CQEDRPLFVQFCANDPDVLLEAARRVEPYCDYVDLNLGCPQRIARRGNYGAFLMDNLPLV 203
           C EDRPL VQFCANDP+V ++AA   + YCD +DLNLGCPQ IA+RG+YGAFL D   L+
Sbjct: 70  CPEDRPLIVQFCANDPEVFVQAALLAQDYCDAIDLNLGCPQMIAKRGHYGAFLQDEWDLL 129

Query: 204 KAIVEKVASNLQVPVSCKIRVFPNLQDTINYARMLEDAGCSLLAVHGRTRDEKDGKKFRA 263
           + ++      L VPV+CKIRVFP +  T+ YA+MLE AGC LL VHGRT+++K      A
Sbjct: 130 QRMILLAHEKLSVPVTCKIRVFPEIDKTVRYAQMLEKAGCQLLTVHGRTKEQKGPLSGAA 189

Query: 264 NWSAISAVKNALRIPVLANGNIRHMEDVHNCLQETGVEGVLSAETLLENPALFAGFRTAQ 323
           +W  I AV+ A+ IPV ANGNI+ ++DV  CL++TGV+GV+SAE  L NPALF G   A 
Sbjct: 190 SWEHIKAVRKAVAIPVFANGNIQCLQDVERCLRDTGVQGVMSAEGNLHNPALFEGRSPAV 249

Query: 324 WTAGCEESSRDGNLDQADLLVDYLKLCEKYPVPWRMIRSHVHKLLGDWFKIHPHIRED 379
           W                +L  +YL +  ++P P   +R+H+ KL     ++H  +RE+
Sbjct: 250 W----------------ELAEEYLDIVREHPCPLSYVRAHLFKLWHHTLQVHQELREE 291

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BLAST of CmoCh20G009770 vs. ExPASy Swiss-Prot
Match: Q9HGN6 (tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)] OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=dus1 PE=3 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 5.5e-69
Identity = 132/302 (43.71%), Postives = 194/302 (64.24%), Query Frame = 0


Query: 84  WSKLGRPKLIVAPMVDNSELPFRLLCRKYGAEAAYTPMLHSRIFTENEKYRNMEFT--TC 143
           ++K+GRPK I+APMVD SELP+R+L R+ GA+  Y+PM HSR+F E+E YRN  F+  T 
Sbjct: 12  YNKIGRPKRILAPMVDQSELPWRILARRSGADLCYSPMFHSRLFGESEDYRNKVFSTRTI 71

Query: 144 QEDRPLFVQFCANDPDVLLEAARRVEPYCDYVDLNLGCPQRIARRGNYGAFLMDNLPLVK 203
            E+RPL +QFC NDP+++L+AA+   PYCD VD+NLGCPQ IA++G YG+FL +N  L++
Sbjct: 72  PEERPLIIQFCGNDPEIMLKAAKIAAPYCDAVDVNLGCPQGIAKKGKYGSFLQENWNLIE 131

Query: 204 AIVEKVASNLQVPVSCKIRVFPNLQDTINYARMLEDAGCSLLAVHGRTRDEKDGKKFRAN 263
           +I+ K+ + L +PV+ KIR+FP+ Q T++YA+M+  AG S+LAVHGR R++K      A+
Sbjct: 132 SIITKLHTELSIPVTAKIRIFPDPQKTLDYAKMILKAGASILAVHGRLREQKGHFTGIAD 191

Query: 264 WSAISAVKNAL--RIPVLANGNIRHMEDVHNCLQETGVEGVLSAETLLENPALFAGFRTA 323
           W  I  ++  L     + ANGNI H +D+  C++ TGV+GVLSAE  L NP +F    + 
Sbjct: 192 WEQIQMLRKNLPSETVLFANGNILHAQDIDRCIKYTGVDGVLSAEGSLYNPRIFLPPSSP 251

Query: 324 QWTAGCEESSRDGNLDQADLLVDYLKLCEKYPV-----PWRMIRSHVHKLLGDWFKIHPH 377
             T           +D  D+  +YL +  ++ +         I+ H+ KL+     IH  
Sbjct: 252 LMTL-------YPRID--DMCEEYLNIIREFKLESDYSSLSAIKGHLFKLMRPLLSIHTD 304

[Close]

BLAST of CmoCh20G009770 vs. ExPASy Swiss-Prot
Match: P53759 (tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)] OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=DUS1 PE=1 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 1.8e-64
Identity = 136/343 (39.65%), Postives = 201/343 (58.60%), Query Frame = 0


Query: 84  WSKLGRPKLIVAPMVDNSELPFRLLCRKYGAEAAYTPMLHSRIFTENEKYRNMEFTT--- 143
           + K+GRP  IVAPMVD SEL +R+L R+YGA  AYTPMLH+++F  ++KYR   +++   
Sbjct: 23  FDKIGRPTRIVAPMVDQSELAWRILSRRYGATLAYTPMLHAKLFATSKKYREDNWSSLDG 82

Query: 144 CQEDRPLFVQFCANDPDVLLEAARRVEPYCDYVDLNLGCPQRIARRGNYGAFLMDNLPLV 203
              DRPL VQFCANDP+ LL AA+ VE  CD VDLNLGCPQ IA++G+YG+FLM+   L+
Sbjct: 83  SSVDRPLVVQFCANDPEYLLAAAKLVEDKCDAVDLNLGCPQGIAKKGHYGSFLMEEWDLI 142

Query: 204 KAIVEKVASNLQVPVSCKIRVFPNLQDTINYARMLEDAGCSLLAVHGRTRDEKDGKKFRA 263
             ++  +  NL+VPV+ KIR+F + + ++NYA+M+ DAG   L VHGR R++K  K   A
Sbjct: 143 HNLINTLHKNLKVPVTAKIRIFDDCEKSLNYAKMVLDAGAQFLTVHGRVREQKGQKTGLA 202

Query: 264 NWSAISAVKNAL--RIPVLANGNIRHMEDVHNCLQETGVEGVLSAETLLENPALFAGFRT 323
           NW  I  +++ L       ANGNI + ED+  C++  G + V+SAE  L NP +F   +T
Sbjct: 203 NWETIKYLRDNLPKETVFFANGNILYPEDISRCMEHIGADAVMSAEGNLYNPGVFNVGQT 262

Query: 324 AQWTAGCEESSRDGNLDQADLLV----DYLKLCEKYPVPWRMIRSHVHKLLGDWFKIHPH 383
                     +++    + D ++      +K C++       ++SH  K+L  +   H  
Sbjct: 263 ---------KNKEKIFPRVDKIIREYFQIVKECQESKASKTAMKSHFFKILRPFLPHHTD 322

Query: 384 IREDF-NAQSKLTFEFLYNMVEQLRELQVKIPLYIKDSPASAI 417
           IR       +K T+E      EQ+ +   K+   I + P  AI
Sbjct: 323 IRSTLATMNAKATWE---EWEEQVVKPVEKVVQEIFEQPDIAI 353

[Close]

BLAST of CmoCh20G009770 vs. ExPASy TrEMBL
Match: A0A6J1FWR0 (tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like OS=Cucurbita moschata OX=3662 GN=LOC111448913 PE=4 SV=1)

HSP 1 Score: 864.8 bits (2233), Expect = 1.5e-247
Identity = 420/420 (100.00%), Postives = 420/420 (100.00%), Query Frame = 0


Query: 1   MRSPSNSHLHLKSILSLRKSFMASSFTQTDFPQDLDDLLCSDPHTQPQDECSSLTKSNDS 60
           MRSPSNSHLHLKSILSLRKSFMASSFTQTDFPQDLDDLLCSDPHTQPQDECSSLTKSNDS
Sbjct: 1   MRSPSNSHLHLKSILSLRKSFMASSFTQTDFPQDLDDLLCSDPHTQPQDECSSLTKSNDS 60

Query: 61  TLLLGSPSGYLSGESRIERAWAHWSKLGRPKLIVAPMVDNSELPFRLLCRKYGAEAAYTP 120
           TLLLGSPSGYLSGESRIERAWAHWSKLGRPKLIVAPMVDNSELPFRLLCRKYGAEAAYTP
Sbjct: 61  TLLLGSPSGYLSGESRIERAWAHWSKLGRPKLIVAPMVDNSELPFRLLCRKYGAEAAYTP 120

Query: 121 MLHSRIFTENEKYRNMEFTTCQEDRPLFVQFCANDPDVLLEAARRVEPYCDYVDLNLGCP 180
           MLHSRIFTENEKYRNMEFTTCQEDRPLFVQFCANDPDVLLEAARRVEPYCDYVDLNLGCP
Sbjct: 121 MLHSRIFTENEKYRNMEFTTCQEDRPLFVQFCANDPDVLLEAARRVEPYCDYVDLNLGCP 180

Query: 181 QRIARRGNYGAFLMDNLPLVKAIVEKVASNLQVPVSCKIRVFPNLQDTINYARMLEDAGC 240
           QRIARRGNYGAFLMDNLPLVKAIVEKVASNLQVPVSCKIRVFPNLQDTINYARMLEDAGC
Sbjct: 181 QRIARRGNYGAFLMDNLPLVKAIVEKVASNLQVPVSCKIRVFPNLQDTINYARMLEDAGC 240

Query: 241 SLLAVHGRTRDEKDGKKFRANWSAISAVKNALRIPVLANGNIRHMEDVHNCLQETGVEGV 300
           SLLAVHGRTRDEKDGKKFRANWSAISAVKNALRIPVLANGNIRHMEDVHNCLQETGVEGV
Sbjct: 241 SLLAVHGRTRDEKDGKKFRANWSAISAVKNALRIPVLANGNIRHMEDVHNCLQETGVEGV 300

Query: 301 LSAETLLENPALFAGFRTAQWTAGCEESSRDGNLDQADLLVDYLKLCEKYPVPWRMIRSH 360
           LSAETLLENPALFAGFRTAQWTAGCEESSRDGNLDQADLLVDYLKLCEKYPVPWRMIRSH
Sbjct: 301 LSAETLLENPALFAGFRTAQWTAGCEESSRDGNLDQADLLVDYLKLCEKYPVPWRMIRSH 360

Query: 361 VHKLLGDWFKIHPHIREDFNAQSKLTFEFLYNMVEQLRELQVKIPLYIKDSPASAISSIG 420
           VHKLLGDWFKIHPHIREDFNAQSKLTFEFLYNMVEQLRELQVKIPLYIKDSPASAISSIG
Sbjct: 361 VHKLLGDWFKIHPHIREDFNAQSKLTFEFLYNMVEQLRELQVKIPLYIKDSPASAISSIG 420

[Close]

BLAST of CmoCh20G009770 vs. ExPASy TrEMBL
Match: A0A6J1JGU3 (tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like OS=Cucurbita maxima OX=3661 GN=LOC111484251 PE=4 SV=1)

HSP 1 Score: 849.0 bits (2192), Expect = 8.6e-243
Identity = 413/420 (98.33%), Postives = 416/420 (99.05%), Query Frame = 0


Query: 1   MRSPSNSHLHLKSILSLRKSFMASSFTQTDFPQDLDDLLCSDPHTQPQDECSSLTKSNDS 60
           MRSPSNSHLHLKSILSLRKSFMASS  QTDFPQDLDDLLCSDPHTQ QDECSSLTKSNDS
Sbjct: 1   MRSPSNSHLHLKSILSLRKSFMASSCAQTDFPQDLDDLLCSDPHTQRQDECSSLTKSNDS 60

Query: 61  TLLLGSPSGYLSGESRIERAWAHWSKLGRPKLIVAPMVDNSELPFRLLCRKYGAEAAYTP 120
           TLLLGSPSGYL+GESRIERAWAHWSKLGRPKLIVAPMVDNSELPFRLLCRKYGAEAAYTP
Sbjct: 61  TLLLGSPSGYLNGESRIERAWAHWSKLGRPKLIVAPMVDNSELPFRLLCRKYGAEAAYTP 120

Query: 121 MLHSRIFTENEKYRNMEFTTCQEDRPLFVQFCANDPDVLLEAARRVEPYCDYVDLNLGCP 180
           MLHSRIFTENEKYRNMEFTTCQEDRPLFVQFCANDPDVLLEAARRVEPYCDYVDLNLGCP
Sbjct: 121 MLHSRIFTENEKYRNMEFTTCQEDRPLFVQFCANDPDVLLEAARRVEPYCDYVDLNLGCP 180

Query: 181 QRIARRGNYGAFLMDNLPLVKAIVEKVASNLQVPVSCKIRVFPNLQDTINYARMLEDAGC 240
           QRIARRGNYGAFLMDNLPLVKAIVEKVASNLQVPVSCKIRVFPNLQDTINYARMLEDAGC
Sbjct: 181 QRIARRGNYGAFLMDNLPLVKAIVEKVASNLQVPVSCKIRVFPNLQDTINYARMLEDAGC 240

Query: 241 SLLAVHGRTRDEKDGKKFRANWSAISAVKNALRIPVLANGNIRHMEDVHNCLQETGVEGV 300
           SLLAVHGRTRDEKDGKKFRANWSAI AVKNALRIPVLANGNIRHMEDV+NCLQETGVEGV
Sbjct: 241 SLLAVHGRTRDEKDGKKFRANWSAIRAVKNALRIPVLANGNIRHMEDVNNCLQETGVEGV 300

Query: 301 LSAETLLENPALFAGFRTAQWTAGCEESSRDGNLDQADLLVDYLKLCEKYPVPWRMIRSH 360
           LSAETLLENPALFAGFRTAQWTAGCEESSRDGNLDQADLLVDYLKLCEKYPVPWRMIRSH
Sbjct: 301 LSAETLLENPALFAGFRTAQWTAGCEESSRDGNLDQADLLVDYLKLCEKYPVPWRMIRSH 360

Query: 361 VHKLLGDWFKIHPHIREDFNAQSKLTFEFLYNMVEQLRELQVKIPLYIKDSPASAISSIG 420
           VHKLLGDWFKIHPHIREDFNAQSKLTFEFLYNMVE+LRELQVKIPLYIKDSPASAISSIG
Sbjct: 361 VHKLLGDWFKIHPHIREDFNAQSKLTFEFLYNMVERLRELQVKIPLYIKDSPASAISSIG 420

[Close]

BLAST of CmoCh20G009770 vs. ExPASy TrEMBL
Match: A0A1S3CHU6 (tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like OS=Cucumis melo OX=3656 GN=LOC103501114 PE=4 SV=1)

HSP 1 Score: 782.3 bits (2019), Expect = 9.9e-223
Identity = 387/424 (91.27%), Postives = 401/424 (94.58%), Query Frame = 0


Query: 1   MRSPSNSHLHLKSILSLRKSFMASSFTQT---DF-PQDLDDLLCSDPHTQPQDECSSLT- 60
           MRS SNSHL+LK+I SLR SFMASSFTQT   D  PQDLDDLLCS P  Q QDE SSLT 
Sbjct: 1   MRSLSNSHLYLKTIFSLRNSFMASSFTQTLKPDLPPQDLDDLLCSHPQKQRQDESSSLTG 60

Query: 61  -KSNDSTLLLGSPSGYLSGESRIERAWAHWSKLGRPKLIVAPMVDNSELPFRLLCRKYGA 120
             SNDS LLLGSP+GYLSGESRIERAWAHW+KLGRPKLIVAPMVDNSELPFRLLCRKYGA
Sbjct: 61  SNSNDSKLLLGSPTGYLSGESRIERAWAHWTKLGRPKLIVAPMVDNSELPFRLLCRKYGA 120

Query: 121 EAAYTPMLHSRIFTENEKYRNMEFTTCQEDRPLFVQFCANDPDVLLEAARRVEPYCDYVD 180
           +AAYTPMLHSRIFTENEKYRNMEFTTCQEDRPLFVQFCANDPDVLLEAARRVEPYCDYVD
Sbjct: 121 DAAYTPMLHSRIFTENEKYRNMEFTTCQEDRPLFVQFCANDPDVLLEAARRVEPYCDYVD 180

Query: 181 LNLGCPQRIARRGNYGAFLMDNLPLVKAIVEKVASNLQVPVSCKIRVFPNLQDTINYARM 240
           LNLGCPQRIARRGNYGAFLMDNLPLVKAIVEK+ASNLQVPVSCKIR+FPNLQDTINYARM
Sbjct: 181 LNLGCPQRIARRGNYGAFLMDNLPLVKAIVEKLASNLQVPVSCKIRIFPNLQDTINYARM 240

Query: 241 LEDAGCSLLAVHGRTRDEKDGKKFRANWSAISAVKNALRIPVLANGNIRHMEDVHNCLQE 300
           LEDAGCSLLAVHGRTRDEKDGKKFRANWSAISAVKNA+RIPVLANGNIRHMEDV+NCLQE
Sbjct: 241 LEDAGCSLLAVHGRTRDEKDGKKFRANWSAISAVKNAVRIPVLANGNIRHMEDVNNCLQE 300

Query: 301 TGVEGVLSAETLLENPALFAGFRTAQWTAGCEESSRDGNLDQADLLVDYLKLCEKYPVPW 360
           TGVEGVLSAETLLENPALFAGFRTA+W  G EE++RDGNLDQADLLVDYLKLCEKYPVPW
Sbjct: 301 TGVEGVLSAETLLENPALFAGFRTAEWIEGQEENTRDGNLDQADLLVDYLKLCEKYPVPW 360

Query: 361 RMIRSHVHKLLGDWFKIHPHIREDFNAQSKLTFEFLYNMVEQLRELQVKIPLYIKDSPAS 419
           RMIRSHVHKLLGDWFKIHPHIREDFNAQSKLTFEFLYNMVE+LRELQVK+PLYIKDS   
Sbjct: 361 RMIRSHVHKLLGDWFKIHPHIREDFNAQSKLTFEFLYNMVERLRELQVKMPLYIKDSHVP 420

[Close]

BLAST of CmoCh20G009770 vs. ExPASy TrEMBL
Match: A0A0A0LTG2 (Dus domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G428390 PE=4 SV=1)

HSP 1 Score: 771.5 bits (1991), Expect = 1.7e-219
Identity = 384/424 (90.57%), Postives = 396/424 (93.40%), Query Frame = 0


Query: 1   MRSPSNSHLHLKSILSLRKSFMASSFTQT---DF-PQDLDDLLCSDPHTQPQDECSSLTK 60
           MRS SNSHLHLK I SL  S MASS  QT   D  PQDLDDLLCS  H QPQ E SSLT 
Sbjct: 1   MRSLSNSHLHLKYIFSLPNSLMASSLIQTLKPDLAPQDLDDLLCSPSHKQPQHESSSLTN 60

Query: 61  --SNDSTLLLGSPSGYLSGESRIERAWAHWSKLGRPKLIVAPMVDNSELPFRLLCRKYGA 120
             SNDST LLGSP+GYLS ESRIERAWAHW+KLGRPKLIVAPMVDNSELPFRLLCRKYGA
Sbjct: 61  STSNDSTPLLGSPTGYLSRESRIERAWAHWTKLGRPKLIVAPMVDNSELPFRLLCRKYGA 120

Query: 121 EAAYTPMLHSRIFTENEKYRNMEFTTCQEDRPLFVQFCANDPDVLLEAARRVEPYCDYVD 180
           EAAYTPMLHSRIFTENEKYRNMEFTTCQEDRPLFVQFCANDPDVLLEAARRVEPYCDYVD
Sbjct: 121 EAAYTPMLHSRIFTENEKYRNMEFTTCQEDRPLFVQFCANDPDVLLEAARRVEPYCDYVD 180

Query: 181 LNLGCPQRIARRGNYGAFLMDNLPLVKAIVEKVASNLQVPVSCKIRVFPNLQDTINYARM 240
           LNLGCPQRIARRGNYGAFLMDNLPLVKAIVEK+ASNLQVPVSCKIR+FPNLQDTINYARM
Sbjct: 181 LNLGCPQRIARRGNYGAFLMDNLPLVKAIVEKLASNLQVPVSCKIRIFPNLQDTINYARM 240

Query: 241 LEDAGCSLLAVHGRTRDEKDGKKFRANWSAISAVKNALRIPVLANGNIRHMEDVHNCLQE 300
           LEDAGCSLLAVHGRTRDEKDGKKFRANWSAISAVKNA+RIPVLANGNIRHMEDV++CLQE
Sbjct: 241 LEDAGCSLLAVHGRTRDEKDGKKFRANWSAISAVKNAVRIPVLANGNIRHMEDVNDCLQE 300

Query: 301 TGVEGVLSAETLLENPALFAGFRTAQWTAGCEESSRDGNLDQADLLVDYLKLCEKYPVPW 360
           TGVEGVLSAETLLENPALFAGFRTA+W  G EE++RDGNLDQADLLVDYLKLCEKYPVPW
Sbjct: 301 TGVEGVLSAETLLENPALFAGFRTAEWIEGHEENTRDGNLDQADLLVDYLKLCEKYPVPW 360

Query: 361 RMIRSHVHKLLGDWFKIHPHIREDFNAQSKLTFEFLYNMVEQLRELQVKIPLYIKDSPAS 419
           RMIRSHVHKLLGDWFKIHPHIREDFNAQSKLTFEFLYNMVE+LRELQVK+PLYIKDS A 
Sbjct: 361 RMIRSHVHKLLGDWFKIHPHIREDFNAQSKLTFEFLYNMVERLRELQVKMPLYIKDSHAL 420

[Close]

BLAST of CmoCh20G009770 vs. ExPASy TrEMBL
Match: A0A6J1D4R6 (tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like OS=Momordica charantia OX=3673 GN=LOC111017278 PE=4 SV=1)

HSP 1 Score: 766.1 bits (1977), Expect = 7.4e-218
Identity = 367/423 (86.76%), Postives = 399/423 (94.33%), Query Frame = 0


Query: 1   MRSPSNSHLHLKSILSLRKSFMASSFTQT---DFPQDLDDLLCSDPHTQPQDECSSLTKS 60
           MRS + SHLHLKS+ SL  S MASSF+QT   D P+ LDDLLCS+   Q ++ECSS+TKS
Sbjct: 1   MRSLAISHLHLKSVFSLHSSLMASSFSQTIKPDLPEHLDDLLCSNQQQQQREECSSVTKS 60

Query: 61  NDSTLLLGSPSGYLSGESRIERAWAHWSKLGRPKLIVAPMVDNSELPFRLLCRKYGAEAA 120
           ++ +LLLGSP+GYLSG+SRIERAWAHWSKLGRPKLIVAPMVDNSELPFRLLCRKYGAEAA
Sbjct: 61  DEPSLLLGSPNGYLSGDSRIERAWAHWSKLGRPKLIVAPMVDNSELPFRLLCRKYGAEAA 120

Query: 121 YTPMLHSRIFTENEKYRNMEFTTCQEDRPLFVQFCANDPDVLLEAARRVEPYCDYVDLNL 180
           YTPMLHSRIFTENEKYRNMEFTTCQEDRPLFVQFCANDPDVLLEAARRVEPYCDYVDLNL
Sbjct: 121 YTPMLHSRIFTENEKYRNMEFTTCQEDRPLFVQFCANDPDVLLEAARRVEPYCDYVDLNL 180

Query: 181 GCPQRIARRGNYGAFLMDNLPLVKAIVEKVASNLQVPVSCKIRVFPNLQDTINYARMLED 240
           GCPQRIARRGNYGAFLMDNLPLVKAIV+K++SNLQVPVSCKIR+FPNLQDT+NYARMLED
Sbjct: 181 GCPQRIARRGNYGAFLMDNLPLVKAIVQKLSSNLQVPVSCKIRIFPNLQDTLNYARMLED 240

Query: 241 AGCSLLAVHGRTRDEKDGKKFRANWSAISAVKNALRIPVLANGNIRHMEDVHNCLQETGV 300
           AGCSLLAVHGRTRDEKDGKKFRANWSAISAVKNA++IPVLANGNIRHMEDV+NCLQETGV
Sbjct: 241 AGCSLLAVHGRTRDEKDGKKFRANWSAISAVKNAVQIPVLANGNIRHMEDVNNCLQETGV 300

Query: 301 EGVLSAETLLENPALFAGFRTAQWTAGCEESSRDGNLDQADLLVDYLKLCEKYPVPWRMI 360
           EGVLSAETLLENPALFAGFRTA+W  GC+E+ RDGNLDQA LLV+YLKLCE+YPVPWR+I
Sbjct: 301 EGVLSAETLLENPALFAGFRTAEWVEGCDENCRDGNLDQAALLVEYLKLCEQYPVPWRII 360

Query: 361 RSHVHKLLGDWFKIHPHIREDFNAQSKLTFEFLYNMVEQLRELQVKIPLYIKDSPASAIS 420
           RSHVHK+LGDWFKIHPH+REDFNAQ KLTFEFLY MV++LRELQVKIPLY+KDSPAS IS
Sbjct: 361 RSHVHKMLGDWFKIHPHVREDFNAQFKLTFEFLYIMVDRLRELQVKIPLYLKDSPASEIS 420

[Close]

BLAST of CmoCh20G009770 vs. NCBI nr
Match: XP_022944464.1 (tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like [Cucurbita moschata])

HSP 1 Score: 864.8 bits (2233), Expect = 3.1e-247
Identity = 420/420 (100.00%), Postives = 420/420 (100.00%), Query Frame = 0


Query: 1   MRSPSNSHLHLKSILSLRKSFMASSFTQTDFPQDLDDLLCSDPHTQPQDECSSLTKSNDS 60
           MRSPSNSHLHLKSILSLRKSFMASSFTQTDFPQDLDDLLCSDPHTQPQDECSSLTKSNDS
Sbjct: 1   MRSPSNSHLHLKSILSLRKSFMASSFTQTDFPQDLDDLLCSDPHTQPQDECSSLTKSNDS 60

Query: 61  TLLLGSPSGYLSGESRIERAWAHWSKLGRPKLIVAPMVDNSELPFRLLCRKYGAEAAYTP 120
           TLLLGSPSGYLSGESRIERAWAHWSKLGRPKLIVAPMVDNSELPFRLLCRKYGAEAAYTP
Sbjct: 61  TLLLGSPSGYLSGESRIERAWAHWSKLGRPKLIVAPMVDNSELPFRLLCRKYGAEAAYTP 120

Query: 121 MLHSRIFTENEKYRNMEFTTCQEDRPLFVQFCANDPDVLLEAARRVEPYCDYVDLNLGCP 180
           MLHSRIFTENEKYRNMEFTTCQEDRPLFVQFCANDPDVLLEAARRVEPYCDYVDLNLGCP
Sbjct: 121 MLHSRIFTENEKYRNMEFTTCQEDRPLFVQFCANDPDVLLEAARRVEPYCDYVDLNLGCP 180

Query: 181 QRIARRGNYGAFLMDNLPLVKAIVEKVASNLQVPVSCKIRVFPNLQDTINYARMLEDAGC 240
           QRIARRGNYGAFLMDNLPLVKAIVEKVASNLQVPVSCKIRVFPNLQDTINYARMLEDAGC
Sbjct: 181 QRIARRGNYGAFLMDNLPLVKAIVEKVASNLQVPVSCKIRVFPNLQDTINYARMLEDAGC 240

Query: 241 SLLAVHGRTRDEKDGKKFRANWSAISAVKNALRIPVLANGNIRHMEDVHNCLQETGVEGV 300
           SLLAVHGRTRDEKDGKKFRANWSAISAVKNALRIPVLANGNIRHMEDVHNCLQETGVEGV
Sbjct: 241 SLLAVHGRTRDEKDGKKFRANWSAISAVKNALRIPVLANGNIRHMEDVHNCLQETGVEGV 300

Query: 301 LSAETLLENPALFAGFRTAQWTAGCEESSRDGNLDQADLLVDYLKLCEKYPVPWRMIRSH 360
           LSAETLLENPALFAGFRTAQWTAGCEESSRDGNLDQADLLVDYLKLCEKYPVPWRMIRSH
Sbjct: 301 LSAETLLENPALFAGFRTAQWTAGCEESSRDGNLDQADLLVDYLKLCEKYPVPWRMIRSH 360

Query: 361 VHKLLGDWFKIHPHIREDFNAQSKLTFEFLYNMVEQLRELQVKIPLYIKDSPASAISSIG 420
           VHKLLGDWFKIHPHIREDFNAQSKLTFEFLYNMVEQLRELQVKIPLYIKDSPASAISSIG
Sbjct: 361 VHKLLGDWFKIHPHIREDFNAQSKLTFEFLYNMVEQLRELQVKIPLYIKDSPASAISSIG 420

[Close]

BLAST of CmoCh20G009770 vs. NCBI nr
Match: KAG7011024.1 (tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 860.9 bits (2223), Expect = 4.5e-246
Identity = 418/420 (99.52%), Postives = 419/420 (99.76%), Query Frame = 0


Query: 1   MRSPSNSHLHLKSILSLRKSFMASSFTQTDFPQDLDDLLCSDPHTQPQDECSSLTKSNDS 60
           MRSPSNSHLHLKSILSLRKSFMASSFTQTDFPQDLDDLLCSDPHTQPQDECSSLTKSNDS
Sbjct: 1   MRSPSNSHLHLKSILSLRKSFMASSFTQTDFPQDLDDLLCSDPHTQPQDECSSLTKSNDS 60

Query: 61  TLLLGSPSGYLSGESRIERAWAHWSKLGRPKLIVAPMVDNSELPFRLLCRKYGAEAAYTP 120
           TLLLGSPSGYLSGESRIERAWAHWSKLGRPKLIVAPMVDNSELPFRLLCRKYGAEAAYTP
Sbjct: 61  TLLLGSPSGYLSGESRIERAWAHWSKLGRPKLIVAPMVDNSELPFRLLCRKYGAEAAYTP 120

Query: 121 MLHSRIFTENEKYRNMEFTTCQEDRPLFVQFCANDPDVLLEAARRVEPYCDYVDLNLGCP 180
           MLHSRIFTENEKYRNMEFTTCQEDRPLFVQFCANDPDVLLEAARRVEPYCDYVDLNLGCP
Sbjct: 121 MLHSRIFTENEKYRNMEFTTCQEDRPLFVQFCANDPDVLLEAARRVEPYCDYVDLNLGCP 180

Query: 181 QRIARRGNYGAFLMDNLPLVKAIVEKVASNLQVPVSCKIRVFPNLQDTINYARMLEDAGC 240
           QRIARRGNYGAFLMDNLPLVKAIVEKVASNLQVPVSCKIRVFPNLQDTI YARMLEDAGC
Sbjct: 181 QRIARRGNYGAFLMDNLPLVKAIVEKVASNLQVPVSCKIRVFPNLQDTITYARMLEDAGC 240

Query: 241 SLLAVHGRTRDEKDGKKFRANWSAISAVKNALRIPVLANGNIRHMEDVHNCLQETGVEGV 300
           SLLAVHGRTRDEKDGKKFRANWSAISAVKNALRIPVLANGNIRHMEDVHNCLQETGVEGV
Sbjct: 241 SLLAVHGRTRDEKDGKKFRANWSAISAVKNALRIPVLANGNIRHMEDVHNCLQETGVEGV 300

Query: 301 LSAETLLENPALFAGFRTAQWTAGCEESSRDGNLDQADLLVDYLKLCEKYPVPWRMIRSH 360
           LSAETLLENPALFAGFRTAQWTAGCEESSRDGNLDQADLLVDYLKLCEKYPVPWRMIRSH
Sbjct: 301 LSAETLLENPALFAGFRTAQWTAGCEESSRDGNLDQADLLVDYLKLCEKYPVPWRMIRSH 360

Query: 361 VHKLLGDWFKIHPHIREDFNAQSKLTFEFLYNMVEQLRELQVKIPLYIKDSPASAISSIG 420
           VHKLLGDWFKIHPHIREDFNAQSKLTFEFLYNMVE+LRELQVKIPLYIKDSPASAISSIG
Sbjct: 361 VHKLLGDWFKIHPHIREDFNAQSKLTFEFLYNMVERLRELQVKIPLYIKDSPASAISSIG 420

[Close]

BLAST of CmoCh20G009770 vs. NCBI nr
Match: XP_023512932.1 (tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 852.0 bits (2200), Expect = 2.1e-243
Identity = 415/420 (98.81%), Postives = 416/420 (99.05%), Query Frame = 0


Query: 1   MRSPSNSHLHLKSILSLRKSFMASSFTQTDFPQDLDDLLCSDPHTQPQDECSSLTKSNDS 60
           MRSPSNSHLHLKSILSLRKSFMASS  QTD PQDLDDLLCSDPHTQ QDECSSLTKSNDS
Sbjct: 1   MRSPSNSHLHLKSILSLRKSFMASSRAQTDLPQDLDDLLCSDPHTQRQDECSSLTKSNDS 60

Query: 61  TLLLGSPSGYLSGESRIERAWAHWSKLGRPKLIVAPMVDNSELPFRLLCRKYGAEAAYTP 120
           TLLLGSPSGYLSGESRIERAWAHWSKLGRPKLIVAPMVDNSELPFRLLCRKYGAEAAYTP
Sbjct: 61  TLLLGSPSGYLSGESRIERAWAHWSKLGRPKLIVAPMVDNSELPFRLLCRKYGAEAAYTP 120

Query: 121 MLHSRIFTENEKYRNMEFTTCQEDRPLFVQFCANDPDVLLEAARRVEPYCDYVDLNLGCP 180
           MLHSRIFTENEKYRNMEFTTCQEDRPLFVQFCANDPDVLLEAARRVEPYCDYVDLNLGCP
Sbjct: 121 MLHSRIFTENEKYRNMEFTTCQEDRPLFVQFCANDPDVLLEAARRVEPYCDYVDLNLGCP 180

Query: 181 QRIARRGNYGAFLMDNLPLVKAIVEKVASNLQVPVSCKIRVFPNLQDTINYARMLEDAGC 240
           QRIARRGNYGAFLMDNLPLVKAIVEKVASNLQVPVSCKIRVFPNLQDTINYARMLEDAGC
Sbjct: 181 QRIARRGNYGAFLMDNLPLVKAIVEKVASNLQVPVSCKIRVFPNLQDTINYARMLEDAGC 240

Query: 241 SLLAVHGRTRDEKDGKKFRANWSAISAVKNALRIPVLANGNIRHMEDVHNCLQETGVEGV 300
           SLLAVHGRTRDEKDGKKFRANWSAISAVKNALRIPVLANGNIRHMEDVHNCLQETGVEGV
Sbjct: 241 SLLAVHGRTRDEKDGKKFRANWSAISAVKNALRIPVLANGNIRHMEDVHNCLQETGVEGV 300

Query: 301 LSAETLLENPALFAGFRTAQWTAGCEESSRDGNLDQADLLVDYLKLCEKYPVPWRMIRSH 360
           LSAETLLENPALFAGFRTAQWTAGCEESSRDGNLDQADLLVDYLKLCEKYPVPWRMIRSH
Sbjct: 301 LSAETLLENPALFAGFRTAQWTAGCEESSRDGNLDQADLLVDYLKLCEKYPVPWRMIRSH 360

Query: 361 VHKLLGDWFKIHPHIREDFNAQSKLTFEFLYNMVEQLRELQVKIPLYIKDSPASAISSIG 420
           VHKLLGDWFKIHPHIREDFNAQSKLTFEFLYNMVE+LRELQVKIPLYIKDSPASAISSIG
Sbjct: 361 VHKLLGDWFKIHPHIREDFNAQSKLTFEFLYNMVERLRELQVKIPLYIKDSPASAISSIG 420

[Close]

BLAST of CmoCh20G009770 vs. NCBI nr
Match: XP_022986543.1 (tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like [Cucurbita maxima])

HSP 1 Score: 849.0 bits (2192), Expect = 1.8e-242
Identity = 413/420 (98.33%), Postives = 416/420 (99.05%), Query Frame = 0


Query: 1   MRSPSNSHLHLKSILSLRKSFMASSFTQTDFPQDLDDLLCSDPHTQPQDECSSLTKSNDS 60
           MRSPSNSHLHLKSILSLRKSFMASS  QTDFPQDLDDLLCSDPHTQ QDECSSLTKSNDS
Sbjct: 1   MRSPSNSHLHLKSILSLRKSFMASSCAQTDFPQDLDDLLCSDPHTQRQDECSSLTKSNDS 60

Query: 61  TLLLGSPSGYLSGESRIERAWAHWSKLGRPKLIVAPMVDNSELPFRLLCRKYGAEAAYTP 120
           TLLLGSPSGYL+GESRIERAWAHWSKLGRPKLIVAPMVDNSELPFRLLCRKYGAEAAYTP
Sbjct: 61  TLLLGSPSGYLNGESRIERAWAHWSKLGRPKLIVAPMVDNSELPFRLLCRKYGAEAAYTP 120

Query: 121 MLHSRIFTENEKYRNMEFTTCQEDRPLFVQFCANDPDVLLEAARRVEPYCDYVDLNLGCP 180
           MLHSRIFTENEKYRNMEFTTCQEDRPLFVQFCANDPDVLLEAARRVEPYCDYVDLNLGCP
Sbjct: 121 MLHSRIFTENEKYRNMEFTTCQEDRPLFVQFCANDPDVLLEAARRVEPYCDYVDLNLGCP 180

Query: 181 QRIARRGNYGAFLMDNLPLVKAIVEKVASNLQVPVSCKIRVFPNLQDTINYARMLEDAGC 240
           QRIARRGNYGAFLMDNLPLVKAIVEKVASNLQVPVSCKIRVFPNLQDTINYARMLEDAGC
Sbjct: 181 QRIARRGNYGAFLMDNLPLVKAIVEKVASNLQVPVSCKIRVFPNLQDTINYARMLEDAGC 240

Query: 241 SLLAVHGRTRDEKDGKKFRANWSAISAVKNALRIPVLANGNIRHMEDVHNCLQETGVEGV 300
           SLLAVHGRTRDEKDGKKFRANWSAI AVKNALRIPVLANGNIRHMEDV+NCLQETGVEGV
Sbjct: 241 SLLAVHGRTRDEKDGKKFRANWSAIRAVKNALRIPVLANGNIRHMEDVNNCLQETGVEGV 300

Query: 301 LSAETLLENPALFAGFRTAQWTAGCEESSRDGNLDQADLLVDYLKLCEKYPVPWRMIRSH 360
           LSAETLLENPALFAGFRTAQWTAGCEESSRDGNLDQADLLVDYLKLCEKYPVPWRMIRSH
Sbjct: 301 LSAETLLENPALFAGFRTAQWTAGCEESSRDGNLDQADLLVDYLKLCEKYPVPWRMIRSH 360

Query: 361 VHKLLGDWFKIHPHIREDFNAQSKLTFEFLYNMVEQLRELQVKIPLYIKDSPASAISSIG 420
           VHKLLGDWFKIHPHIREDFNAQSKLTFEFLYNMVE+LRELQVKIPLYIKDSPASAISSIG
Sbjct: 361 VHKLLGDWFKIHPHIREDFNAQSKLTFEFLYNMVERLRELQVKIPLYIKDSPASAISSIG 420

[Close]

BLAST of CmoCh20G009770 vs. NCBI nr
Match: KAG6571229.1 (tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 822.4 bits (2123), Expect = 1.8e-234
Identity = 397/399 (99.50%), Postives = 398/399 (99.75%), Query Frame = 0


Query: 22  MASSFTQTDFPQDLDDLLCSDPHTQPQDECSSLTKSNDSTLLLGSPSGYLSGESRIERAW 81
           MASSFTQTDFPQDLDDLLCSDPHTQPQDECSSLTKSNDSTLLLGSPSGYLSGESRIERAW
Sbjct: 1   MASSFTQTDFPQDLDDLLCSDPHTQPQDECSSLTKSNDSTLLLGSPSGYLSGESRIERAW 60

Query: 82  AHWSKLGRPKLIVAPMVDNSELPFRLLCRKYGAEAAYTPMLHSRIFTENEKYRNMEFTTC 141
           AHWSKLGRPKLIVAPMVDNSELPFRLLCRKYGAEAAYTPMLHSRIFTENEKYRNMEFTTC
Sbjct: 61  AHWSKLGRPKLIVAPMVDNSELPFRLLCRKYGAEAAYTPMLHSRIFTENEKYRNMEFTTC 120

Query: 142 QEDRPLFVQFCANDPDVLLEAARRVEPYCDYVDLNLGCPQRIARRGNYGAFLMDNLPLVK 201
           QEDRPLFVQFCANDPDVLLEAARRVEPYCDYVDLNLGCPQRIARRGNYGAFLMDNLPLVK
Sbjct: 121 QEDRPLFVQFCANDPDVLLEAARRVEPYCDYVDLNLGCPQRIARRGNYGAFLMDNLPLVK 180

Query: 202 AIVEKVASNLQVPVSCKIRVFPNLQDTINYARMLEDAGCSLLAVHGRTRDEKDGKKFRAN 261
           AIVEKVASNLQVPVSCKIRVFPNLQDTI YARMLEDAGCSLLAVHGRTRDEKDGKKFRAN
Sbjct: 181 AIVEKVASNLQVPVSCKIRVFPNLQDTITYARMLEDAGCSLLAVHGRTRDEKDGKKFRAN 240

Query: 262 WSAISAVKNALRIPVLANGNIRHMEDVHNCLQETGVEGVLSAETLLENPALFAGFRTAQW 321
           WSAISAVKNALRIPVLANGNIRHMEDVHNCLQETGVEGVLSAETLLENPALFAGFRTAQW
Sbjct: 241 WSAISAVKNALRIPVLANGNIRHMEDVHNCLQETGVEGVLSAETLLENPALFAGFRTAQW 300

Query: 322 TAGCEESSRDGNLDQADLLVDYLKLCEKYPVPWRMIRSHVHKLLGDWFKIHPHIREDFNA 381
           TAGCEESSRDGNLDQADLLVDYLKLCEKYPVPWRMIRSHVHKLLGDWFKIHPHIREDFNA
Sbjct: 301 TAGCEESSRDGNLDQADLLVDYLKLCEKYPVPWRMIRSHVHKLLGDWFKIHPHIREDFNA 360

Query: 382 QSKLTFEFLYNMVEQLRELQVKIPLYIKDSPASAISSIG 421
           QSKLTFEFLYNMVE+LRELQVKIPLYIKDSPASAISSIG
Sbjct: 361 QSKLTFEFLYNMVERLRELQVKIPLYIKDSPASAISSIG 399

[Close]

BLAST of CmoCh20G009770 vs. TAIR 10
Match: AT5G67220.1 (FMN-linked oxidoreductases superfamily protein )

HSP 1 Score: 609.8 bits (1571), Expect = 1.7e-174
Identity = 291/399 (72.93%), Postives = 336/399 (84.21%), Query Frame = 0


Query: 12  KSILSLRKSFMASSFTQTDFPQDLDDLLCSDPHTQPQDECSSLTKSNDSTLLLGSPSGYL 71
           KS++S  ++   +   + D  Q LDD+LCS+      +E      ++     LGSPS  L
Sbjct: 15  KSLISQTRAMTQNPDPKPDPSQVLDDILCSEQRDGQIEETVDTAPAS-----LGSPSRVL 74

Query: 72  SGESRIERAWAHWSKLGRPKLIVAPMVDNSELPFRLLCRKYGAEAAYTPMLHSRIFTENE 131
           S ++R+ERAWAHW KLGRPK IVAPMVDNSELPFRLLC+KYGA+AAYTPMLHSRIFTE E
Sbjct: 75  SIDTRVERAWAHWKKLGRPKYIVAPMVDNSELPFRLLCQKYGAQAAYTPMLHSRIFTETE 134

Query: 132 KYRNMEFTTCQEDRPLFVQFCANDPDVLLEAARRVEPYCDYVDLNLGCPQRIARRGNYGA 191
           KYRN EFTTC+EDRPLFVQFCANDPD LLEAA+RVEPYCDYVD+NLGCPQRIARRGNYGA
Sbjct: 135 KYRNQEFTTCKEDRPLFVQFCANDPDTLLEAAKRVEPYCDYVDINLGCPQRIARRGNYGA 194

Query: 192 FLMDNLPLVKAIVEKVASNLQVPVSCKIRVFPNLQDTINYARMLEDAGCSLLAVHGRTRD 251
           FLMDNLPLVK++VEK+A NL VPVSCKIR+FPNL+DT+ YA+MLEDAGCSLLAVHGRTRD
Sbjct: 195 FLMDNLPLVKSLVEKLAQNLNVPVSCKIRIFPNLEDTLKYAKMLEDAGCSLLAVHGRTRD 254

Query: 252 EKDGKKFRANWSAISAVKNALRIPVLANGNIRHMEDVHNCLQETGVEGVLSAETLLENPA 311
           EKDGKKFRA+WSAI  VKNA+RIPVLANGN+R +EDV NC++ETGVEGVLSAETLLENPA
Sbjct: 255 EKDGKKFRADWSAIKEVKNAMRIPVLANGNVRCIEDVDNCIKETGVEGVLSAETLLENPA 314

Query: 312 LFAGFRTAQWTAGCEESS-RDGNLDQADLLVDYLKLCEKYPVPWRMIRSHVHKLLGDWFK 371
            FAGFRTA+W    EE    DG LDQ DL+V+YLKLCEK+PVPWRMIRSHVHK+LG+WF+
Sbjct: 315 AFAGFRTAEWAKDNEEEGFVDGGLDQGDLVVEYLKLCEKHPVPWRMIRSHVHKMLGEWFR 374

Query: 372 IHPHIREDFNAQSKLTFEFLYNMVEQLRELQVKIPLYIK 410
           IHP +RE  NAQ+ LTFEFLY +V+QLREL  ++PLY K
Sbjct: 375 IHPQVREQLNAQNILTFEFLYGLVDQLRELGGRVPLYKK 408

[Close]

BLAST of CmoCh20G009770 vs. TAIR 10
Match: AT3G49640.1 (Aldolase-type TIM barrel family protein )

HSP 1 Score: 128.3 bits (321), Expect = 1.5e-29
Identity = 79/247 (31.98%), Postives = 121/247 (48.99%), Query Frame = 0


Query: 91  KLIVAPMVDNSELPFRLLCRKYGAEAAYTPMLHSRIFTENEKYRNME------------- 150
           KL++APMV    L FR+L  +YGA+  Y   +      + E+  N+              
Sbjct: 6   KLVLAPMVRVGTLSFRMLAAEYGADITYGEEIIDHKLVKCERRLNVASGTSEFVEKGTDN 65

Query: 151 --FTTCQEDRPLFV-QFCANDPDVLLEAARRVEPYCDYVDLNLGCPQRIARRGNYGAFLM 210
             F+TC E++   V Q   +D    L+A+  V      +D+N+GCP+  + +G  GA L+
Sbjct: 66  VVFSTCDEEKSRVVFQMGTSDAVRALKASEIVCNDVATIDINMGCPKAFSIQGGMGAALL 125

Query: 211 DNLPLVKAIVEKVASNLQVPVSCKIRVFPNLQDTINYARMLEDAGCSLLAVHGRTRDEKD 270
               L+  I+  +  NL VPV+CKIR+  +  DT+  AR +E  G   LAVHG  R   D
Sbjct: 126 SKPELIHDILATLKRNLDVPVTCKIRLLKSPADTVELARRIEKLGVPALAVHG--RKIAD 185

Query: 271 GKKFRANWSAISAVKNALRIPVLANGNIRHMEDVHNCLQETGVEGVLSAETLLENPALFA 322
             +  A W  I+ V  AL IPV+ANG++   +D       TG   V+ A   + N ++F+
Sbjct: 186 RPRDPAKWDEIADVVAALSIPVIANGDVLEYDDFSRIKTATGAASVMVARGAMWNASIFS 245

[Close]

BLAST of CmoCh20G009770 vs. TAIR 10
Match: AT3G49640.2 (Aldolase-type TIM barrel family protein )

HSP 1 Score: 111.3 bits (277), Expect = 1.9e-24
Identity = 64/188 (34.04%), Postives = 98/188 (52.13%), Query Frame = 0


Query: 135 NMEFTTCQEDRPLFV-QFCANDPDVLLEAARRVEPYCDYVDLNLGCPQRIARRGNYGAFL 194
           N+ F+TC E++   V Q   +D    L+A+  V      +D+N+GCP+  + +G  GA L
Sbjct: 26  NVVFSTCDEEKSRVVFQMGTSDAVRALKASEIVCNDVATIDINMGCPKAFSIQGGMGAAL 85

Query: 195 MDNLPLVKAIVEKVASNLQVPVSCKIRVFPNLQDTINYARMLEDAGCSLLAVHGRTRDEK 254
           +    L+  I+  +  NL VPV+CKIR+  +  DT+  AR +E  G   LAVHG  R   
Sbjct: 86  LSKPELIHDILATLKRNLDVPVTCKIRLLKSPADTVELARRIEKLGVPALAVHG--RKIA 145

Query: 255 DGKKFRANWSAISAVKNALRIPVLANGNIRHMEDVHNCLQETGVEGVLSAETLLENPALF 314
           D  +  A W  I+ V  AL IPV+ANG++   +D       TG   V+ A   + N ++F
Sbjct: 146 DRPRDPAKWDEIADVVAALSIPVIANGDVLEYDDFSRIKTATGAASVMVARGAMWNASIF 205

Query: 315 AGFRTAQW 322
           +    + W
Sbjct: 206 SPKGKSHW 211

[Close]

BLAST of CmoCh20G009770 vs. TAIR 10
Match: AT4G38890.1 (FMN-linked oxidoreductases superfamily protein )

HSP 1 Score: 81.6 bits (200), Expect = 1.6e-15
Identity = 52/200 (26.00%), Postives = 93/200 (46.50%), Query Frame = 0


Query: 89  RPKLIVAPMVDNSELPFRLLCRKYGAEAAYTPMLHSRIFTENEKYRNMEFTTCQEDRPLF 148
           R KL +AP+     LPFR LC+  GA+     M       + +            +    
Sbjct: 337 RDKLYLAPLTTVGNLPFRRLCKVLGADVTCGEMAMCTNLLQGQASEWALLRRHSSEDLFG 396

Query: 149 VQFCANDPDVLLEAARRVEPYC--DYVDLNLGCPQRIARRGNYGAFLMDNLPLVKAIVEK 208
           VQ C + PD +      ++  C  D++D+N+GCP  +    + G+ L++    +K IVE 
Sbjct: 397 VQICGSYPDTVSRVVELIDRECTVDFIDINMGCPIDMVVNKSAGSALLNKPLRMKNIVEV 456

Query: 209 VASNLQVPVSCKIRV--FPNLQDTINYARMLEDAGCSLLAVHGRTRDEKDGKKFRANWSA 268
            +S ++ P++ K+R   F       +    + + G + + +HGR+R ++  K   A+W  
Sbjct: 457 SSSIVETPITIKVRTAFFEGKNRIDSLIADIGNWGATAVTIHGRSRQQRYSKS--ADWDY 516

Query: 269 I-SAVKNA-LRIPVLANGNI 283
           I    KNA   + V+ NG++
Sbjct: 517 IYQCTKNATTNLQVIGNGDV 534

[Close]

BLAST of CmoCh20G009770 vs. TAIR 10
Match: AT3G63510.1 (FMN-linked oxidoreductases superfamily protein )

HSP 1 Score: 62.4 bits (150), Expect = 1.0e-09
Identity = 39/135 (28.89%), Postives = 66/135 (48.89%), Query Frame = 0


Query: 90  PKLIVAPMVDNSELPFRLLCRKYGAEA-AYTPMLHSRIFTENEKYRNMEFTTCQEDRPLF 149
           P   VAPM+D ++  +R L R     A  YT M+ +      +   +       +  P+ 
Sbjct: 52  PSFSVAPMMDWTDNHYRTLARLITKHAWLYTEMIAAETLVHQQTNLDRFLAFSPQQHPIV 111

Query: 150 VQFCANDPDVLLEAARRVEPY-CDYVDLNLGCPQ-RIARRGNYGAFLMDNLPLVKAIVEK 209
           +Q   ++ + L +AA+  + Y  D ++LN GCP  ++A  G +G  LM    LV   +  
Sbjct: 112 LQLGGSNVENLAKAAKLSDAYGYDEINLNCGCPSPKVAGHGCFGVSLMLKPKLVGEAMSA 171

Query: 210 VASNLQVPVSCKIRV 222
           +A+N  VPV+ K R+
Sbjct: 172 IAANTNVPVTVKCRI 186

The following BLAST results are available for this feature:

BLAST of CmoCh20G009770 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8K582	4.5e-79	47.99	tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like OS=Rattus norvegicus OX=101...	[more]
Q8C2P3	7.6e-79	47.65	tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like OS=Mus musculus OX=10090 GN...	[more]
Q6P1R4	2.9e-78	47.65	tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like OS=Homo sapiens OX=9606 GN=...	[more]
Q9HGN6	5.5e-69	43.71	tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)] OS=Schizosaccharomyces pombe (st...	[more]
P53759	1.8e-64	39.65	tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)] OS=Saccharomyces cerevisiae (str...	[more]

BLAST of CmoCh20G009770 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FWR0	1.5e-247	100.00	tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like OS=Cucurbita moschata OX=36...	[more]
A0A6J1JGU3	8.6e-243	98.33	tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like OS=Cucurbita maxima OX=3661...	[more]
A0A1S3CHU6	9.9e-223	91.27	tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like OS=Cucumis melo OX=3656 GN=...	[more]
A0A0A0LTG2	1.7e-219	90.57	Dus domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G428390 PE=4 SV...	[more]
A0A6J1D4R6	7.4e-218	86.76	tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like OS=Momordica charantia OX=3...	[more]

BLAST of CmoCh20G009770 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022944464.1	3.1e-247	100.00	tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like [Cucurbita moschata]	[more]
KAG7011024.1	4.5e-246	99.52	tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like protein [Cucurbita argyrosp...	[more]
XP_023512932.1	2.1e-243	98.81	tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like [Cucurbita pepo subsp. pepo...	[more]
XP_022986543.1	1.8e-242	98.33	tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like [Cucurbita maxima]	[more]
KAG6571229.1	1.8e-234	99.50	tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like protein, partial [Cucurbita...	[more]

BLAST of CmoCh20G009770 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G67220.1	1.7e-174	72.93	FMN-linked oxidoreductases superfamily protein	[more]
AT3G49640.1	1.5e-29	31.98	Aldolase-type TIM barrel family protein	[more]
AT3G49640.2	1.9e-24	34.04	Aldolase-type TIM barrel family protein	[more]
AT4G38890.1	1.6e-15	26.00	FMN-linked oxidoreductases superfamily protein	[more]
AT3G63510.1	1.0e-09	28.89	FMN-linked oxidoreductases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013785	Aldolase-type TIM barrel	GENE3D	3.20.20.70	Aldolase class I	coord: 89..323 e-value: 5.2E-80 score: 270.1
IPR035587	DUS-like, FMN-binding domain	PFAM	PF01207	Dus	coord: 93..384 e-value: 1.9E-73 score: 247.2
IPR035587	DUS-like, FMN-binding domain	CDD	cd02801	DUS_like_FMN	coord: 91..321 e-value: 1.44524E-106 score: 312.506
None	No IPR available	PANTHER	PTHR11082	TRNA-DIHYDROURIDINE SYNTHASE	coord: 71..409
None	No IPR available	PANTHER	PTHR11082:SF35	BNAA09G07510D PROTEIN	coord: 71..409
None	No IPR available	SUPERFAMILY	51395	FMN-linked oxidoreductases	coord: 90..366
IPR018517	tRNA-dihydrouridine synthase, conserved site	PROSITE	PS01136	UPF0034	coord: 173..191

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh20G009770.1	CmoCh20G009770.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0002943	tRNA dihydrouridine synthesis
biological_process	GO:0008033	tRNA processing
molecular_function	GO:0050660	flavin adenine dinucleotide binding
molecular_function	GO:0017150	tRNA dihydrouridine synthase activity
molecular_function	GO:0003824	catalytic activity